NO10G03890, NO10G03890 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G03890
Unique Name	NO10G03890
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4696
Alignment location	chr10:1134313..1139008 -

Link to JBrowse

Properties


Property Name	Value
Description	DNA polymerase epsilon subunit

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:1134313..1139008 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication
GO:0071897	DNA biosynthetic process
GO:0006261	DNA-dependent DNA replication
GO:0006260	DNA replication

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003887	DNA-directed DNA polymerase activity
GO:0016779	nucleotidyltransferase activity
GO:0016740	transferase activity
GO:0003887	DNA-directed DNA polymerase activity
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR024639	DNA_pol_e_bsu_N
IPR007185	DNA_pol_alpha/epsilon_bsu

Vocabulary: **Cellular Component**
Term	Definition
GO:0008622	epsilon DNA polymerase complex
GO:0005634	nucleus

Homology

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BLAST of NO10G03890 vs. NCBI_GenBank
Match: CBN78416.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 417.5 bits (1072), Expect = 6.500e-113
Identity = 235/530 (44.34%), Postives = 325/530 (61.32%), Query Frame = 0

Query:   38 RAIFRAFKLRGLSVKADAVAALVSVLTHEEDVDGALDAILDAIKGLIERGELKSSLVDRSIIETVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEP--QTKSFAFTFDKRRKMNPDAGARARMFRERYQLARQRVMRNELFVKPIM-GHDRNYLKLVTVDSLLGTHGEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLLNGLFTENSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLKHMRSLEIFGPGFTPQQYQDLALLEKEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTHLVFVLMGDFTSKPVAHGNEGTSQLLGYFDGLSSLLKHDAPTLCAEATFIFVPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIVLFREDIMKKMLRHSILQGCKDHDGHAEEPLVRCLVQSLLDQGHLCPLPLKARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDSFAAYYPATRTVEAS 565
            +A+FRAFKL+GL ++ADA  A+V V+  EE  D A+ AI+ ++K  IER EL S++VD   +  VV  LT  E DL   +  + +AF  P++ ++P   T        ++R M+  A ++ARM+RER+ + RQRV R++LF  PI+    R Y+KL  +DSL+G+   + LLG +TQ EEG+++LED    +PLD S        +A    GLFTE+ +V+V G++   VF+V  +GFP  EAR+D+L+ +   ++FG G  PQQ + +  LE +A   + V ++D++LD+P  +EKL  LF G++ A       H  FVLMG+F S P+ H  +  +Q +  FD L  L+    P L + A F+FVPGP DPGAG  LPR PLPA  T SL   L HA F +NPCRLR FTQE+V FR+DI+KKM RH++     D D    E    C  ++LL QGHLCPLPL ARPI WE D+AL LYPLP + +L D +         C  ++PG FP D SF  Y PATRTVE S
Sbjct:    5 QAVFRAFKLQGLGLRADAARAIVRVVEREEGADEAVQAIIRSVKARIERNELSSNVVDVDTVSAVVADLTSREQDLADSSTQMQNAFVRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVQRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLS--------NAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLELKATDAMFVIVSDVNLDKPQVMEKLEALFDGFQYAQPP---PH--FVLMGNFCSSPITHAADSVAQAVARFDSLCKLIL-KFPDLASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFRDDILKKMQRHALFPP-SDPDMDVTE---HC-TKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFS 515

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BLAST of NO10G03890 vs. NCBI_GenBank
Match: XP_008875930.1 (hypothetical protein H310_11140 [Aphanomyces invadans] >ETV95229.1 hypothetical protein H310_11140 [Aphanomyces invadans])

HSP 1 Score: 363.2 bits (931), Expect = 1.400e-96
Identity = 209/534 (39.14%), Postives = 309/534 (57.87%), Query Frame = 0

Query:   38 RAIFRAFKLRGLSVKADAVAALVSVLTHEEDVDGALDAILDAIKGLIERGELKSSLVDRSIIETVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEPQTKSFAFTFDKRRKMNPDAGARARMFRERYQLARQRVMRNELFVKPIMGHDR--NYLKLVTVDSLLGTHGEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLLNGLFTENSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLKHMRSLEIFGPGFTPQQYQDLALLEKEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTHLVFVLMGDFTSKPVAHGNEGTS----QLLGYFDGLSSL-LKHDAPTLCAEATFIFVPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIVLFREDIMKKMLRHSILQGCKDHDGHAEEPLVRCLVQSLLDQGHLCPLPLKARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDSFAAYYPATRTVEAS 565
            + +FR  KL GL++ +DA+  L+S LT++  +   L+ ++ AIK  I+R +LK+S+V +  +E+ +  L    +D + + + +++AF  PK+ Y P TKS+  + D  RK++  +  R  ++RER+    +RV+R++ F KP+    R  N+  +  ++SLLG  G K +LG + Q E  R YLEDMT  I LD S        +A   NG+FT + +VLV G+VLDDVF V  +G P PE R+ +L  +  ++  G   + QQ   +  LE E      V L+D+HLD P  L++L  LF GYE       FT  +F+ MG+FTS  V +G    S     L   FD L++L LK+  P L  ++ F+FVPGP+DPGA  V+PR  LP   T      +  A   SNPCR+R +T++ V++R+D+  KM + S+     D        + R LV++L+DQGHLCPLP+ ARPI W YD++L+L+PLP +LIL D      + YAG  V  PG F VD SF  Y P+T T E S
Sbjct:    5 KQVFRELKLHGLTLHSDALKRLLSELTNQPTL--VLEDVVFAIKNSIDRSKLKTSVVTQDALESALDTLLNVSSDNDYQCIQVFNAFEQPKLVYHPSTKSYEVSADPSRKLHASSTHRLSLYRERFAALERRVLRHKSFAKPVASTTRQYNFQDISRIESLLGVTGTKRVLGMLGQDERKRVYLEDMTSRIYLDVS--------EAKFTNGIFTSSCIVLVEGQVLDDVFHVETIGSPPPELREQSLHVLSGVDALGVEVSTQQLAQIKQLESEQELDCFVVLSDVHLDEPDVLKRLDALFSGYE------PFTPTLFIFMGNFTSTRVGYGYGAESTTIRTLKQLFDDLATLILKY--PALVEKSQFLFVPGPNDPGAPDVVPRHALPTVCTEDFIRRIPSAIMSSNPCRVRYYTKDFVIYRDDLQHKMSKASLFPLSTD---TGSNDVSRHLVKTLVDQGHLCPLPIPARPIHWAYDSSLQLFPLPAVLILADKCDQFQVNYAGVSVFHPGPFHVDYSFVLYRPSTNTAEIS 517

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BLAST of NO10G03890 vs. NCBI_GenBank
Match: XP_002292909.1 (hypothetical protein THAPSDRAFT_263717, partial [Thalassiosira pseudonana CCMP1335] >EED90105.1 hypothetical protein THAPSDRAFT_263717, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 354.0 bits (907), Expect = 8.800e-94
Identity = 209/526 (39.73%), Postives = 310/526 (58.94%), Query Frame = 0

Query:   44 FKLRGLSVKADAVAALVSVLTHEEDV--DGALDAILDAIK---GLIERGELKSSLVDRSIIETVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEPQTKSFAFTFDKRRKMNPDAGARARMFRERYQLARQRVMRNELFVKPIM---GHDRNYLKLVTVDSLLGTHGEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLL-NGLFTENSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLK--HMRSLEIFGPGFTPQQYQDLALLE-KEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTHL-VFVLMGDFTSKPVAHGNEGTSQLLGYFDGLSSLLKHDAPTLCAEATFIFVPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIVLFREDIMKKMLRHSILQGCKDHDGHAEEPLVRCLVQSLLDQGHLCPLPLKARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDSFAAYYP 557
            FK+RGLS++A A+ ++++VL +E     D  L AI+D IK     +  G +   +V   ++E VV  +++   D+ +EAV + DAF  P++ Y+   K F+   +  + +  +A  +  MF +RY L  QR++R ++F   ++   G    +  L  V+SLLG  G + LLG I QVEEG++YLED T  + L+FS         ASLL +G  TENS+VLV GE +D V  V +MG P  E R D++K   +++ +IF    +  + + L   E K     + V L+D+HLD P  +EK+  + +GY        FT L +FV MG+FTSKP++  ++GT  ++GYF+ L++++    P + AE  F+FVPGP+DPG   VLPRGP+P   T SL S + HA F SNPCR+R F++EIV FR+D++ KM RH +LQ        +   L +  V+++LDQGHL PLPL A PI W++D+ALRLYP PD LI+GD        Y  C  ++PG F    +F  Y P
Sbjct:    1 FKMRGLSIQAPALNSILNVLKNEPPTSKDDTLFAIIDEIKEKMTTVGGGGMNQCVVTTDLLEDVVADMSRGAKDVTEEAVQLLDAFKTPRLEYDSMRKVFSLV-EGGKSVCGEAVDKVDMFSQRYSLIHQRILRQDIFQPKLITARGGGTTH-TLTPVESLLGRSGRRFLLGMIVQVEEGKYYLEDHTSQVLLNFS--------QASLLTDGFVTENSVVLVEGEAIDGVLHVHHMGNPIVENRSDSIKAIGLQNTDIFNSIGSLSELEKLRDQEMKHGQDGMFVVLSDVHLDSPAVIEKIELMLEGYSD------FTPLPIFVFMGNFTSKPLSGASDGTKAMIGYFEDLAAVIT-KFPNIAAEGRFVFVPGPNDPGITGVLPRGPIPNFFTSSLRSKVKHAVFASNPCRMRFFSKEIVFFRDDLVGKMRRHCLLQ-----PRSSVHKLSQFAVKTVLDQGHLSPLPLSASPIYWQHDHALRLYPFPDALIVGDRVDQYYENYEECDAINPGPFSAGFNFVVYRP 504

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BLAST of NO10G03890 vs. NCBI_GenBank
Match: OQR90110.1 (DNA polymerase epsilon subunit [Achlya hypogyna])

HSP 1 Score: 352.1 bits (902), Expect = 3.300e-93
Identity = 205/540 (37.96%), Postives = 308/540 (57.04%), Query Frame = 0

Query:   35 AANRAIFRAFKLRGLSVKADAVAALVSVLTHEEDVDGALDAILDAIKGLIERGELKSSLVDRSIIETVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEPQTKSFAFTFDKRRKMNPDAGARARMFRERYQLARQRVMRNELFVKPIMGH---DRNYLKLVTVDSLLGTHGEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLLNGLFTENSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLKHMRSLEIFGPGFTPQQYQDLALLEKEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTHLVFVLMGDFTSKPVAHGNEGTS--QLLGYFDGLSS-LLKHDAPTLCAEATFIFVPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIVLFREDIMKKMLRHSI--LQGCKDHDGHAEEPLVRCLVQSLLDQGHLCPLPLKARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDSFAAYYPATRTVEASML 567
            AA + +FRAFKL+GL++ ADA+  L+  +  +  V   L+ ++ AIK  I+R +L +S+V +  +E+ +  L     + + +A+ ++ A   PK+ YE  +K++    D+ R+++     R  +FRER+    +RV R++ F KP+M      R YL+L  ++SLLG  G K +LG + Q E    YLED+T  I ++        T       G++T NS+V+V G+V DDVF V +MG P PE R D++  +  L+  G   + QQ   +  LE +      V L+D+HLD P  +++L  LF+GY        F   +FVLMG+FTS PV +G +  S        D L++ LLK+  P+L   + F+ VPGP DPGA +VLPR PLP   T      +  A   SNPCR+R FT++IV+ R+D+  KM R+ +  L+   D D      + R LV++++DQGHLCPL L A+PI W YD +L+L+PLPD+L+L D +    + YAG   + PG F VD SF  Y PAT   E S +
Sbjct:    2 AAAKQVFRAFKLQGLTLHADALKRLLREMDEQPSV--LLEDVIYAIKNSIDRSKLTNSVVTQEALESALDTLLSVSTENDYQAIQVFSALEQPKLRYESLSKTYEVVADRGRRLHAAPEYRVNLFRERFAAVERRVRRHKTFSKPVMATTSLQREYLELTRIESLLGVSGVKRVLGMLGQDERNNIYLEDLTARIYIN--------TDKTICAPGMYTLNSVVIVEGQVRDDVFHVESMGGPPPEYRADSIAILGGLDPLGVEVSAQQMTQIRELEAQDDLASFVILSDVHLDDPQVMKRLDRLFEGY------APFCPTLFVLMGNFTSTPVGYGQDAISIADFKELLDDLAAILLKY--PSLVEHSKFVLVPGPDDPGAASVLPRHPLPDMCTTDFLRKIPSATMASNPCRIRYFTKDIVILRDDLQAKMRRNCLMPLEAAAD-DEDRTTTVSRQLVKTVIDQGHLCPLSLSAQPIHWAYDGSLQLFPLPDVLVLADKTDQFQVGYAGVAAIHPGPFYVDYSFMLYRPATAVTELSRI 522

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BLAST of NO10G03890 vs. NCBI_GenBank
Match: XP_012204292.1 (hypothetical protein SPRG_09753 [Saprolegnia parasitica CBS 223.65] >KDO25023.1 hypothetical protein SPRG_09753 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 351.3 bits (900), Expect = 5.700e-93
Identity = 199/523 (38.05%), Postives = 297/523 (56.79%), Query Frame = 0

Query:   34 AAANRAIFRAFKLRGLSVKADAVAALVSVLTHEEDVDGALDAILDAIKGLIERGELKSSLVDRSIIETVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEPQTKSFAFTFDKRRKMNPDAGARARMFRERYQLARQRVMRNELFVKPIMGH---DRNYLKLVTVDSLLGTHGEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLLNGLFTENSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLKHMRSLEIFGPGFTPQQYQDLALLEKEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTHLVFVLMGDFTSKPVAHGNEGTSQLLGYFDGLSSLLKHDAPTLCAEATFIFVPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIVLFREDIMKKMLRHSI--LQGCKDHDGHAEEPLVRCLVQSLLDQGHLCPLPLKARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDSF 552
            A   + +FRAFKL+GL++ ADA+  L+  +  E  +   LD +L AIK  I+R +L +S+V    +E+ +  L     + + +++ ++DAF MP + YE  TK+++   D+ R+++     R  +FR R+    +RV R++ F KP+M      R YL+L  ++SLLG  G K +LG + Q E    YLED+T  I ++        T       G++T NS+V+V G+V DD+F V +MG P PE R D+L  +  L+  G   + QQ   +  LE +      V L+D+HLD P  +++L  LF+GY        F   +FVLMG+FTS PV       +      D L++LL    P+L A + F+ VPGP DPGA  VLPR PLP+  T      +  A   SNPCR+R +T+++V+ R+D+  KM R+ +  L    D D      + R L+++++DQGHLCPLPL A+PI W YDNAL+L+PLPD++IL D +    + YAG     PG F VD SF
Sbjct:    2 APGAKQVFRAFKLQGLTLHADALKRLLHEMEMEPTL--GLDDVLFAIKNSIDRSKLINSVVTIEALESALDTLLSVSAENDYQSIQVFDAFEMPSLQYEAMTKTYSVGLDRHRRLHASPNYRVNLFRNRFAAIERRVRRHKTFSKPVMASAKLQREYLELTRIESLLGVSGVKRVLGMLGQDERNAMYLEDLTARIYIN--------TDKTVCAPGMYTLNSVVIVEGQVRDDIFHVESMGGPPPEFRTDSLGILGGLDPLGIEVSSQQLAQIRALEAQDELASFVILSDVHLDDPQVMKRLEILFEGY------APFCPTLFVLMGNFTSTPVGQDAMSIADFKDLLDNLANLLL-QFPSLVAHSQFVLVPGPDDPGAAKVLPRHPLPSMCTQDFLRKIPTATMASNPCRIRYYTKDLVILRDDLQAKMRRNCLMPLDAPADDDEERTTTVSRQLIKTVIDQGHLCPLPLSAQPIHWAYDNALQLFPLPDVMILADKTDQYQVGYAGVAAFHPGPFYVDYSF 507

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BLAST of NO10G03890 vs. NCBI_GenBank
Match: XP_008616151.1 (hypothetical protein SDRG_11875 [Saprolegnia diclina VS20] >EQC30298.1 hypothetical protein SDRG_11875 [Saprolegnia diclina VS20])

HSP 1 Score: 345.1 bits (884), Expect = 4.100e-91
Identity = 199/522 (38.12%), Postives = 296/522 (56.70%), Query Frame = 0

Query:   34 AAANRAIFRAFKLRGLSVKADAVAALVSVLTHEEDVDGALDAILDAIKGLIERGELKSSLVDRSIIETVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEPQTKSFAFTFDKRRKMNPDAGARARMFRERYQLARQRVMRNELFVKPIMGH---DRNYLKLVTVDSLLGTHGEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLLNGLFTENSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLKHMRSLEIFGPGFTPQQYQDLALLEKEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTHLVFVLMGDFTSKPVAHGNEGTSQLLGYFDGLSSLLKHDAPTLCAEATFIFVPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIVLFREDIMKKMLRHSI--LQGCKDHDGHAEEPLVRCLVQSLLDQGHLCPLPLKARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDS 551
            A   + +FRAFKL+GL++ ADA+  L+  +  E+ +   LD +L AIK  I+R +L +S+V    +E+ +  L     + + +++ ++DAF MP + YE  TK+++   D+ R+++     R  +FR R+    +RV R++ F KP+M      R YL+L  ++SLLG  G K +LG + Q E    YLED+T  I ++        T       G++T NS+V+V G+V DDVF V +MG P PE R D+L  +  L+  G   + QQ   +  LE +      V L+D+HLD P  +++L  LF+GY        F   +FVLMG+FTS PV       +      D L++LL    P+L A + F+ VPGP DPGA  VLPR PLP+  T      +  A   SNPCR+R +T++IV+ R+D+  KM R+ +  L    D        + R L+++++DQGHLCPLPL A+PI W YDNAL+L+PLPD++IL D +    + YAG     PG F VD S
Sbjct:    2 APGAKQVFRAFKLQGLTLHADALKRLLHEMEVEQTL--GLDDVLFAIKNSIDRSKLVNSVVTIEALESALDTLLSVSAENDYQSIQVFDAFEMPGLQYEAMTKTYSVGLDRHRRLHAAPNYRVNLFRHRFAAIERRVRRHKTFSKPVMASAKLQREYLELTRIESLLGVSGIKRVLGMLGQDERNAMYLEDLTARIYIN--------TDKTVCAPGMYTLNSVVIVEGQVRDDVFYVESMGGPPPEFRLDSLGILGGLDPLGIEVSSQQLTQIRALEAQDELASFVILSDVHLDDPQVMKRLEILFEGY------APFCPTLFVLMGNFTSTPVGQDAMSIADFKDLLDNLANLLL-QFPSLVAHSQFVLVPGPDDPGAAKVLPRHPLPSMCTHDFVRKIPTATMASNPCRIRYYTKDIVILRDDLQAKMRRNCLMPLAAPADXXXXXXXTVSRQLIKTVIDQGHLCPLPLSAQPIHWAYDNALQLFPLPDVMILADKTDQYQVGYAGVAAFHPGPFYVDYS 506

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BLAST of NO10G03890 vs. NCBI_GenBank
Match: GAY05523.1 (DNA polymerase epsilon subunit, putative [Pythium insidiosum])

HSP 1 Score: 340.9 bits (873), Expect = 7.700e-90
Identity = 208/566 (36.75%), Postives = 304/566 (53.71%), Query Frame = 0

Query:   40 IFRAFKLRGLSVKADAVAALVSVLTHE------------------EDVDGALDAILDAIKGLIERGELKSSLVDRSIIETVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEPQTKSFAFTFDKRRKMNPDAGARARMFRERYQLARQRVMRNELFVKPIM--GHDRNYLKLVTVDSLLGTHGEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLLNGLFTENSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLKHMRSLEIFGPGFTPQQYQDLALLEKEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTHLVFVLMGDFTSKPVAHGNEGTS--QLLGYFDGLSSL-LKHDAPTLCAEATFIFVPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIVLFREDIMKKMLRHSILQGCKD---------HDG---------HAEEPLVRCLVQSLLDQGHLCPLPLKARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDSFAAYYPATRTVEAS 565
            + RA KL+GLS+  DA+  LV  L +E                   +    LD++L A+K  I+R ++ +S+V  + +E+ +  L    ++   E + I+DAFS P++ Y   + S+    D  R ++  A  R  + R R+Q    RV RN++F  P M       Y++L  ++SLLG  G + ++G + Q E  RF+LED+T  I ++         + A   NGLFT N +VLV GEV+DDV  V  MGFP PE ++++L  +  ++  G   + QQ + +  LE   H    + L+D+HLD P  ++ L  LFQG ES          +FVLMGDF S PV  G   TS   L  Y D L +L LK+  P L   + F+ VPGP+DPG+    PR PLP+  T  L   + +    +NPCR+R +TQ+IV+FRED+ +KM RH+IL    D          DG              + + LV++L+DQ HLCPLPL A P+ W +D+AL+L+PLPD+L+LGD +    + Y+   V  PG F VD SF  Y P+T T E S
Sbjct:  531 VLRACKLQGLSLHPDALRRLVQELQNEGRWALETDARVCCLRRLRSEPSLELDSVLYALKNSIDRSKMTTSVVSLAALESALDTLLAVSDENQFERLQIFDAFSTPRLHYRAGSNSYELRADTHRTLHATAEDRLALLRNRFQSVELRVKRNKMFAPPSMAVAQQVEYIELSRIESLLGVTGVRRVMGMLGQDERKRFFLEDLTARIYIEL--------NGAVYTNGLFTVNCVVLVEGEVIDDVLHVHTMGFPPPETKEESLLVLGGVDPLGVEVSAQQLEQIRALEASDHHATFIVLSDVHLDDPQVMQHLDLLFQGLESVLPS------LFVLMGDFLSTPVGAGAGSTSLQDLKDYLDELGNLILKY--PKLAEFSKFVLVPGPNDPGSSRAFPRHPLPSMCTRDLMRRVPNLTCSTNPCRIRYYTQDIVIFREDLHQKMHRHAILPALPDDNEXXXXXXXDGKNVAMETTTRPHVDISKHLVKTLIDQAHLCPLPLLAAPVHWAFDSALQLFPLPDVLMLGDSTEQYQLGYSSVAVFHPGPFHVDFSFVLYRPSTNTTEFS 1080

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BLAST of NO10G03890 vs. NCBI_GenBank
Match: ETI49921.1 (hypothetical protein F443_06424 [Phytophthora parasitica P1569] >ETK89799.1 hypothetical protein L915_06310 [Phytophthora parasitica] >ETL43184.1 hypothetical protein L916_06246 [Phytophthora parasitica] >ETO78641.1 hypothetical protein F444_06488 [Phytophthora parasitica P1976] >ETP19689.1 hypothetical protein F441_06432 [Phytophthora parasitica CJ01A1] >ETP47626.1 hypothetical protein F442_06470 [Phytophthora parasitica P10297])

HSP 1 Score: 339.7 bits (870), Expect = 1.700e-89
Identity = 197/547 (36.01%), Postives = 305/547 (55.76%), Query Frame = 0

Query:   36 ANRAIFRAFKLRGLSVKADAVAALVSVLTHEEDVDGALDAILDAIKGLIERGELKSSLVDRSIIETVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEPQTKSFAFTFDKRRKMNPDAGARARMFRERYQLARQRVMRNELFVKP--IMGHDRNYLKLVTVDSLLGTHGEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLLNGLFTENSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLKHMRSLEIFGPGFTPQQYQDLALLEKEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTHLVFVLMGDFTSKPV--AHGNEGTSQLLGYFDGLSSL-LKHDAPTLCAEATFIFVPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIVLFREDIMKKMLRHSIL--------QGCKDHDGHA-----EEPLVRCLVQSLLDQGHLCPLPLKARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDSFAAYYPATRTVEAS 565
            A++ + RA KL+GLS+ ADA+  L   LT+E  +   L+ ++ AIK  I+R ++ SS+V    +E+ +  L     + + E + ++ AF  P++ +     S+    D  R+++    +R ++ R R+     RV RN LF  P   + +   Y++L  ++SLLG  G + ++G + Q E  RFYLED T  I +D +        +A+  +GLFT N +VLV GEV+DDV  V +MGFP PE ++ +L+ +  ++  G   + QQ + +  LE   H    + L+D+HLD P  + KL  LFQG ES          +F+LMGDF S  +    G+     L  Y + L +L LK+  P +   + FI VPGP+DPG+ +  PR PLP   T  L   + +    +NPCR+R +TQ+IV+FR+D+ +KM RH+IL        +     DG A     ++ + + L ++L+DQ HLCPLPL A PI W++D++L+L+P PD+LILGD +    + Y+   V  PG F  D SF  Y P+T T E S
Sbjct:    2 ASKRVLRACKLQGLSLHADALRRLTDELTNEASLQ--LEDVIYAIKNNIDRSKMTSSVVTLEALESALDTLLAVSAENDYEQIQVFGAFDTPRLHFNTHNNSYELRADAHRRLHAGPESRIQLLRNRFMSVDLRVKRNRLFAPPSAAVANTTEYMELSRIESLLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIIDLT--------NAAYTDGLFTINCMVLVEGEVIDDVLHVQSMGFPPPETKEASLEVLGGIDPLGVEVSAQQREQIRELEASDHHATFIVLSDVHLDDPQVMSKLDELFQGLESVQP------TLFILMGDFMSTSIGGGAGSNSLQDLREYLEELGNLILKY--PGIAENSRFILVPGPNDPGSSSAFPRHPLPDLCTRELIRKVPNVTCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPMPSEQEEAEMGEDGEAVQSVSQKDISKHLAKTLIDQAHLCPLPLMANPINWDFDSSLQLFPAPDVLILGDSTEQYQLGYSSVGVFHPGPFHADYSFVFYRPSTNTTEFS 530

[Close]

BLAST of NO10G03890 vs. NCBI_GenBank
Match: ETM49541.1 (hypothetical protein L914_06241 [Phytophthora parasitica])

HSP 1 Score: 338.6 bits (867), Expect = 3.800e-89
Identity = 196/547 (35.83%), Postives = 305/547 (55.76%), Query Frame = 0

Query:   36 ANRAIFRAFKLRGLSVKADAVAALVSVLTHEEDVDGALDAILDAIKGLIERGELKSSLVDRSIIETVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEPQTKSFAFTFDKRRKMNPDAGARARMFRERYQLARQRVMRNELFVKP--IMGHDRNYLKLVTVDSLLGTHGEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLLNGLFTENSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLKHMRSLEIFGPGFTPQQYQDLALLEKEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTHLVFVLMGDFTSKPV--AHGNEGTSQLLGYFDGLSSL-LKHDAPTLCAEATFIFVPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIVLFREDIMKKMLRHSIL--------QGCKDHDGHA-----EEPLVRCLVQSLLDQGHLCPLPLKARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDSFAAYYPATRTVEAS 565
            A++ + RA KL+GLS+ ADA+  L   LT+E  +   L+ ++ AIK  I+R ++ SS+V    +E+ +  L     + + E + ++ AF  P++ +     S+    D  R+++    +R ++ R R+     RV RN LF  P   + +   Y++L  ++SLLG  G + ++G + Q E  RFYLED T  I +D +        +A+  +GLFT N ++LV GEV+DDV  V +MGFP PE ++ +L+ +  ++  G   + QQ + +  LE   H    + L+D+HLD P  + KL  LFQG ES          +F+LMGDF S  +    G+     L  Y + L +L LK+  P +   + FI VPGP+DPG+ +  PR PLP   T  L   + +    +NPCR+R +TQ+IV+FR+D+ +KM RH+IL        +     DG A     ++ + + L ++L+DQ HLCPLPL A PI W++D++L+L+P PD+LILGD +    + Y+   V  PG F  D SF  Y P+T T E S
Sbjct:    2 ASKRVLRACKLQGLSLHADALRRLTDELTNEASLQ--LEDVIYAIKNNIDRSKMTSSVVTLEALESALDTLLAVSAENDYEQIQVFGAFDTPRLHFNTHNNSYELRADAHRRLHAGPESRIQLLRNRFMSVDLRVKRNRLFAPPSAAVANTTEYMELSRIESLLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIIDLT--------NAAYTDGLFTINCMLLVEGEVIDDVLHVQSMGFPPPETKEASLEVLGGIDPLGVEVSAQQREQIRELEASDHHATFIVLSDVHLDDPQVMSKLDELFQGLESVQP------TLFILMGDFMSTSIGGGAGSNSLQDLREYLEELGNLILKY--PGIAENSRFILVPGPNDPGSSSAFPRHPLPDLCTRELIRKVPNVTCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPMPSEQEEAEMGEDGEAVQSVSQKDISKHLAKTLIDQAHLCPLPLMANPINWDFDSSLQLFPAPDVLILGDSTEQYQLGYSSVGVFHPGPFHADYSFVFYRPSTNTTEFS 530

[Close]

BLAST of NO10G03890 vs. NCBI_GenBank
Match: XP_008891905.1 (hypothetical protein PPTG_02538 [Phytophthora parasitica INRA-310] >ETN22672.1 hypothetical protein PPTG_02538 [Phytophthora parasitica INRA-310])

HSP 1 Score: 336.3 bits (861), Expect = 1.900e-88
Identity = 197/547 (36.01%), Postives = 303/547 (55.39%), Query Frame = 0

Query:   36 ANRAIFRAFKLRGLSVKADAVAALVSVLTHEEDVDGALDAILDAIKGLIERGELKSSLVDRSIIETVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEPQTKSFAFTFDKRRKMNPDAGARARMFRERYQLARQRVMRNELFVKP--IMGHDRNYLKLVTVDSLLGTHGEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLLNGLFTENSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLKHMRSLEIFGPGFTPQQYQDLALLEKEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTHLVFVLMGDFTSKPV--AHGNEGTSQLLGYFDGLSSL-LKHDAPTLCAEATFIFVPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIVLFREDIMKKMLRHSIL--------QGCKDHDGHA-----EEPLVRCLVQSLLDQGHLCPLPLKARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDSFAAYYPATRTVEAS 565
            A++ + RA KL+GLS+ ADA+  L   LT+E      L+ ++ AIK  I+R ++ SS+V    +E+ +  L     + + E + ++ AF  P++ +     S+    D  R+++    +R ++ R R+     RV RN LF  P   + +   Y++L  ++SLLG  G + ++G + Q E  RFYLED T  I +D +        +A+  +GLFT N +VLV GEV+DDV  V +MGFP PE ++ +L+ +  ++  G   + QQ + +  LE   H    + L+D+HLD P  + KL  LFQG ES          +F+LMGDF S  +    G+     L  Y + L +L LK+  P +   + FI VPGP+DPG+ +  PR PLP   T  L     +    +NPCR+R +TQ+IV+FR+D+ +KM RH+IL        +     DG A     ++ + + L ++L+DQ HLCPLPL A PI W++D++L+L+P PD+LILGD +    + Y+   V  PG F  D SF  Y P+T T E S
Sbjct:    2 ASKRVLRACKLQGLSLHADALRRLTDELTNE--ASPQLEDVIYAIKNNIDRSKMTSSVVTLEALESALDTLLAVSAENDYEQIQVFGAFDTPRLHFNTHNNSYELRADAHRRLHAGPESRIQLLRNRFMSVDLRVKRNRLFAPPSAAVANTTEYMELSRIESLLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIIDLT--------NAAYTDGLFTINCMVLVEGEVIDDVLHVQSMGFPPPETKEASLEVLGGIDPLGVEVSAQQREQIRELEASDHHATFIVLSDVHLDDPQVMSKLDELFQGLESVQP------TLFILMGDFMSTSIGGGAGSNSLQDLREYLEELGNLILKY--PGIAENSRFILVPGPNDPGSSSAFPRHPLPDLCTRELIRKGPNVTCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPMPSEQEEAEMGEDGEAVQSVSQKDISKHLAKTLIDQAHLCPLPLMANPINWDFDSSLQLFPAPDVLILGDSTEQYQLGYSSVGVFHPGPFHADYSFVFYRPSTNTTEFS 530

The following BLAST results are available for this feature:

BLAST of NO10G03890 vs. NCBI_GenBank

BLAST of NO10G03890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
CBN78416.1	6.500e-113	44.34	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_008875930.1	1.400e-96	39.14	hypothetical protein H310_11140 [Aphanomyces invad...	[more]
XP_002292909.1	8.800e-94	39.73	hypothetical protein THAPSDRAFT_263717, partial [T...	[more]
OQR90110.1	3.300e-93	37.96	DNA polymerase epsilon subunit [Achlya hypogyna]	[more]
XP_012204292.1	5.700e-93	38.05	hypothetical protein SPRG_09753 [Saprolegnia paras...	[more]
XP_008616151.1	4.100e-91	38.12	hypothetical protein SDRG_11875 [Saprolegnia dicli...	[more]
GAY05523.1	7.700e-90	36.75	DNA polymerase epsilon subunit, putative [Pythium ...	[more]
ETI49921.1	1.700e-89	36.01	hypothetical protein F443_06424 [Phytophthora para...	[more]
ETM49541.1	3.800e-89	35.83	hypothetical protein L914_06241 [Phytophthora para...	[more]
XP_008891905.1	1.900e-88	36.01	hypothetical protein PPTG_02538 [Phytophthora para...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL052	nonsL052	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR004	ncniR004	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR016	ngnoR016	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK001256	NSK001256	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO10G03890.1	NO10G03890.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|585460	gene_3818	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_101029g1	gene4920	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO10G03890.1	NO10G03890.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO10G03890 ID=NO10G03890|Name=NO10G03890|organism=Nannochloropsis oceanica|type=gene|length=4696bp
CAATTTTTCCGGAGAAAATGCCCGGGACGTGCTGCGAGAAAAGACAGATC
TGCTCTCTCCACAAGGACACAGGCATTCGAAAAAGAGAAGAAGCTCGAAG
GGCCTGCATTCGCCCGAACTTGCCTCATGTCGCCGGCGCAGAAAGGACAT
GACACTTGGGCATTCACACTTATACAAACCAATCCTCCCCTACAAGCACA
TAGGTACATGTCGTCCTCTACGACGGCGGCGGCCAACCGTGCCATCTTCA
GGGCGTTTAAGCTGAGGGGTCTTAGTGTCAAGGCGGATGCAGTCGCGGCC
TTGGTCTCAGgtgggtaagcctagggcgagggagagaggagaggaaaaag
agacatagacaatgaggcatgtgcgaacacgtgatgatgtgacaagagac
agtgcaccatgtatgtttgtggtgatggctcctctagaatgatgaagcta
gaacctcacattccctcccctcccctccttgccccacctcccactccagT
CCTAACCCACGAAGAAGACGTGGACGGGGCACTAGACGCCATATTAGACG
CGATCAAAGGCCTGATTGAACGAGGTGAGCTAAAGTCGTCTCTTGTGGAC
AGGAGTATTATCGAGACGGTCGTAAAACAGTTGACCAAGGATGAAAATGA
TCTCAACCAGgtaaggtttagatagggagggcgagcgggaggagggagag
gaagaaagcaagaaaagaagaaaagcgactaagagggaaatatctcaata
ggggagggggaggtggaatgtagatgcatcaataatacactgttattgtc
gtcacggtcgctaatgccttcagtctatcatcttccccccccctcctttt
ctccttccttccccttccattgctgtaactacagGAAGCTGTGGCCATCT
GGGATGCGTTTAGCATGCCCAAGATGACCTATGAGCCGCAGACCAAGAGC
TTTGCCTTCACGTTTGACAAGCGCCGCAAGATGAACCCGGACGCGGGGGC
ACGgtgcgggagggagggagtgaggaagggaggggcaagaggtctgtccg
ccagcaatttcttgtctgttccctgcgcgaagatgctcccaagcccatga
gataaagatggggaaaacgcgaggatagaaggccctacaagtttccatgg
aacctcgcacactgacctttcccgccctccttccctccctcctttcctcc
cctcctcccgacctccttcccgccctccttccctccctccccagCGCCCG
CATGTTCCGGGAGCGCTACCAGCTGGCCCGGCAACGCGTGATGCGCAACG
AGCTCTTCGTCAAGCCCATCATGGGCCACGACCGCAACTATCTTAAGCTC
GTCACTGTTGACTCCCTGCTCGGCACGCACGgtagggagggagggaggga
gggagggagggagggagggaggggtcggtatcacaagtcacggccgacag
tagctaaagctggtcatgatgaagttaatcctgaggacacatgggccgct
ccatccgtccctccctccctccctccctccctccaagtatgttgtcctac
gtcactcactgctccctccctccctcccacgatcgtcgcagGCGAAAAGA
ATCTACTGGGGTGCATCACGCAGGTGGAGGAGGGACGTTTCTACCTCGAG
GACATGACAGgtctcaatcgagagagggagggaaggagggagggaggaag
ggaggaaggaagggagggaggaagggagggaagaatgacagcttctacac
cggtacggaacggatcaacaggctcaacctccccctctccctcatattcc
cccttcccttctccctccctccctcagGCCACATCCCGTTGGATTTCTCC
GACCTCCTCACCTCCCAAACGCATGACGCCTCCCTCCTCAACGGCCTCTT
CACTGAGAACTCCCTCGTCCTCGTCGGTGGGGAGGTTCTCGACGATGTCT
TCCGGGTATGGAACATGGGTTTCCCCTTCCCCGAAGCCAGgtacgtcctc
ctcctcttctttcttccttccctccctccctcccttcctccctccctccc
tccctccctccctccctcctcctcgtcaagaacttcaccggctcagacct
tgtattaatatccctccctccctccctccctccctccctccctccctcca
gACAAGACACCCTGAAGCACATGCGTTCCCTTGAGATTTTCGGCCCTGGG
TTCACCCCTCAGCAATACCAGGACTTGGCCCTCCTCGAGAAGGAGgtgcg
ttgccctccctccctccccccctccctccctcctcccttttctcatgtct
ctctctctcgcttcctcgtttcctcccatccacaaactccttctcctccc
cccccgtcccccctccctccctccctccctagGCCCACGGCATGCTCCTC
GTGAGCCTCGCAGACCTCCACCTCGACCGACCCACCGCCCTTGAAAAACT
CCGGgtagggagggcgggagggagggcgggagggagggagggaacaaggg
aaaaggagagcagtcgctgtgccagccccgtatctcactgtctaccggcc
gtcgaccgcccttccctccctccctccctccctccctccctccctcccta
ccccagACGCTCTTCCAGGGCTACGAGAGCGCTTATTCGGACGGGGCCTT
TACGCACCTCGTCTTCGTCCTGATGGGAGACTTCACCTCCAAGCCTGTCG
CGCACGGCAACGAAGGCACCTCCCAACTCTTAGgtacgtgtgtcctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctttttcccttcgctttctccttccctccttcgcgccctccctccc
tttccccctcagctctctaccccccctccctccctctctccctgcctccc
tccctccttcgtgcccgccctccatctctccaagacatgtcccttaaatc
tcttttcccttccctcccccccccctctttccttccctccccctcaccat
acagGCTACTTCGACGGTTTATCCTCCCTCCTCAAGCACGATGCTCCCAC
CCTCTGTGCTGAAGCCACCTTCATCTTCGTCCCCGGACCTCACGATCCAG
gtgataccctccctccctccctccctccccccctccctccctttcttcct
cctccctccctaccctcgggcatctctccctcagaaacacaaagtctgac
ttcttccgtcccttccccctccctcccctccctcccttcctccctccctc
ccttcaccagGCGCCGGTGCCGTCCTCCCTCGCGGGCCTCTCCCTGCGTC
CCTCACGCTCTCCCTGGCTTCAACCTTACACCATGCACACTTCGTCTCCA
ATCCCTGCCGAgtaaggagggagggagggaggcagggagggaggcactga
gggacctgaaatagcagtgtccagaggggggggaggaggaaggagggagg
aaaggagggagggttgctcctgaatagcaagttcctgatgagtcgacgtc
ttatgatgctcaccttcattatatccatccatctctccctccctccctcc
ctccctcccagCTCCGCCTCTTCACCCAAGAAATCGTCCTCTTCCGAGAA
GACATCATGAAGAAGATGCTCCGACACTCGATCCTCCAAGGCTGCAAAGA
CCACgtacgtacctctccctccccccctccctcccttcctccctccctcc
ctcctcttcccatctcatcaccgggacggacaagtggaagagcccttgat
gcgatacccctccattcatccctccctcccttccttcctcgctccctcct
tctccttcctccacccctcacctcccttcctccctcccttcctcctcttc
ccatctcatcaccagGACGGACACGCGGAGGAGCCTTTGGTCCGGTGCCT
CGTCCAATCCCTCCTCGATCAGGGCCACCTCTGCCCACTGCCTCTCAAGg
tacgtgcccttcctcctcccctccttccctgcctcttcttctcatctatc
tgcacagaggttgtctgacctacctacctacctccctccctccctccttc
agGCCCGCCCCATTGCCTGGGAGTACGACAATGCCCTCCGCCTCTACCCC
CTGCCCGACCTCCTCATCCTCGGCGATCATTCCATGAACACCTCCATTGA
GTATGCAGGGTGTCAGgtatgccctcccttcctcccttcctcccttcctc
ccttcctcccttcctcccccctcatcctcggtgatcattccatgaaaaca
tccattgagtagtccctccctccctcccttcttccctccttgcctgcttt
ggaccccttccctcaccctcccttcttccctcccttcctccctctttccc
tctctccctcccaacctcagGTCGTCTCTCCCGGCTGTTTCCCAGTCGAC
GATTCTTTCGCGGCCTACTATCCCGCCACCCGCACTGTGGAGGCCTCCAT
GTTGCCACACTGAGGAGGGAGGGAGAGAGAGAGGGAGGGAGGGAGGCGTG
GGTGTAGGTGTGTGTATGTATAAGAAAGAATGCGAGAAGACGAAAGACAG
GAGAGGAGAAGAAGGATAATCAATAGCACGAGAACGAAGGAGGGGAAGGA
GGAGGAGGAAGAGAGGGAAGGATGGAAGGAGGCAGGGAAAGAAGGAGAGG
AATCCTCTCAGACCTAGGGCCCCAGGCCAGCACCGACTTCATGCTA

protein sequence of NO10G03890.1

>NO10G03890.1-protein ID=NO10G03890.1-protein|Name=NO10G03890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=569bp
MSPAQKGHDTWAFTLIQTNPPLQAHRYMSSSTTAAANRAIFRAFKLRGLS
VKADAVAALVSVLTHEEDVDGALDAILDAIKGLIERGELKSSLVDRSIIE
TVVKQLTKDENDLNQEAVAIWDAFSMPKMTYEPQTKSFAFTFDKRRKMNP
DAGARARMFRERYQLARQRVMRNELFVKPIMGHDRNYLKLVTVDSLLGTH
GEKNLLGCITQVEEGRFYLEDMTGHIPLDFSDLLTSQTHDASLLNGLFTE
NSLVLVGGEVLDDVFRVWNMGFPFPEARQDTLKHMRSLEIFGPGFTPQQY
QDLALLEKEAHGMLLVSLADLHLDRPTALEKLRTLFQGYESAYSDGAFTH
LVFVLMGDFTSKPVAHGNEGTSQLLGYFDGLSSLLKHDAPTLCAEATFIF
VPGPHDPGAGAVLPRGPLPASLTLSLASTLHHAHFVSNPCRLRLFTQEIV
LFREDIMKKMLRHSILQGCKDHDGHAEEPLVRCLVQSLLDQGHLCPLPLK
ARPIAWEYDNALRLYPLPDLLILGDHSMNTSIEYAGCQVVSPGCFPVDDS
FAAYYPATRTVEASMLPH*

Synonyms

Publications