NO10G03720, NO10G03720 (gene) Nannochloropsis oceanica

Overview
NameNO10G03720
Unique NameNO10G03720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3358
Alignment locationchr10:1073487..1076844 +

Link to JBrowse

Properties
Property NameValue
DescriptionNADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 9
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1073487..1076844 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR001509Epimerase_deHydtase_N
Homology
BLAST of NO10G03720 vs. NCBI_GenBank
Match: XP_008891639.1 (hypothetical protein PPTG_02328 [Phytophthora parasitica INRA-310] >ETN22375.1 hypothetical protein PPTG_02328 [Phytophthora parasitica INRA-310])

HSP 1 Score: 275.8 bits (704), Expect = 2.000e-70
Identity = 142/343 (41.40%), Postives = 204/343 (59.48%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR    GITA++FG TGFLG+Y+   +G  G    +  RGD+ +V   +V+ DLG  A  P+  RD DSI   +EGSD+ IN +GK+Y TKHM+P+          +N+  +++H++    +AEVAK   V   +HVS+L A P S   W A+K +GE A++  FP A IVRP  +FGPEDRLL W       G +P+ + G+A++QP +V+DV  A+  I +D E  +GKTFE  G+  FT++EL D+  D+T Q   +V+LPL V +      EQ P+P  T D A  +S + I   +S     ++LD++PT LEK A NY+ ++   GGHF    GYH
Sbjct:   50 PVGRVRGNGITATVFGATGFLGRYVCAHLGINGNGYVVPYRGDDLEVAHLRVSADLGNVAQQPFHPRDRDSIFEAVEGSDIVINLVGKHYQTKHMLPWW---------INYTYDDVHVDVARTIAEVAKEASVPRMVHVSSLLAQPNSPSEWAASKFRGEVAVRKAFPEANIVRPSNMFGPEDRLLVWMGNRLSYGGIPVVDNGDAVIQPVFVNDVAKAIYHITQD-ETIQGKTFEFVGDEEFTYKELADYVFDITKQNSRLVNLPLPVAQAIGYFCEQFPDPKFTRDWATRLSLNEI--KTSDLPGLRELDVEPTKLEKEAPNYMIKF-NPGGHFQEVSGYH 379          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: XP_024574895.1 (nadh dehydrogenase [Plasmopara halstedii] >CEG38526.1 nadh dehydrogenase [Plasmopara halstedii])

HSP 1 Score: 275.4 bits (703), Expect = 2.600e-70
Identity = 143/343 (41.69%), Postives = 207/343 (60.35%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR    GITA++FG TGFLG+Y+   +G  G    L  RGD+ +V   +V+ DLG  A  PY  RD DSI   ++GSD+ IN IGK+Y TKH++P+          +N+  +++H++    +AEVAK  GV   +HVS+L A P S   W A+K +GE A++  FP   IVRP  +FGPEDRLL W       G VP+ + G+A++QP +V+DV  A+  I +D E  +G+TFEL G+  F+++EL D+  DVT Q P +V+LPL+V +      EQ P+P  T D A  +S + I   +S     ++LD++P+ LEK A N++ ++   GGHF    GYH
Sbjct:   15 PVGRVRGDGITATVFGSTGFLGRYVCAHLGINGNGYVLPYRGDDAEVAHLRVSADLGNVAPHPYHPRDRDSIFEAVKGSDIVINLIGKHYQTKHLLPWW---------INYTYDDVHVDVARTIAEVAKEAGVPRMVHVSSLLAQPNSPSVWAASKFRGEVAVRKAFPKVNIVRPSNMFGPEDRLLIWMGNRLMYGGVPVVDNGDAIIQPVFVNDVAKAIYHITQD-ETIQGQTFELVGDEEFSYKELADYVFDVTKQNPRLVNLPLSVAQAIGYFCEQFPDPKFTRDWATRLSLNEI--KTSDLPGLRELDVEPSKLEKEAPNFMLKF-NPGGHFQEVSGYH 344          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: XP_002177332.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51795.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 275.0 bits (702), Expect = 3.400e-70
Identity = 148/381 (38.85%), Postives = 224/381 (58.79%), Query Frame = 0
Query:    9 RRGLSGVAAGQL-EKGFKDFGPGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMI-----PYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAE-AGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVI--LEP---------SSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            RR LS   + +L E+   + G GG SS AG+  +LFG +GFLG Y+  E+G  G+  YLANRGD+ ++R  K+ FDLG+     YS RD DSIK V++ +DV +N IGKYY++   I     PY   R       N+   + ++E P  LAE+   + V+HF+HVS+  A P++   W  TK  GE+A+K V+P ATI+RP + FG +DR L+WFA+ A+   IVPL +GG+ L QP +  DV   ++K+ ++P  +EG+  +  G   F++ EL DF  D+T +   + +LP       +  L+   +P++T D  ++ S D +  + P          +K +T +DL I+PTP+EK+AF ++  YR  GGHF   +GYH
Sbjct:   24 RRSLSNFYSPKLTERRVGEAGSGGHSSEAGVKVALFGASGFLGNYVCGELGANGFMAYLANRGDDMEMRHLKIPFDLGRTRFQFYSPRDRDSIKEVIQDADVVVNMIGKYYESGQPIQTAKFPYVGYR------TNYSFADANVEIPRTLAEICLEMQVDHFVHVSSASASPDARSEWSRTKYAGEQAIKEVYPWATIIRPTQFFGKQDRFLHWFARMAKWYRIVPLVDGGKTLTQPVWAGDVAKTILKVCDNPSIFEGRQIDCFGPAEFSYSELADFVNDITERNRPVFNLPYDYYAAIAKVLQYQRDPLITPDLVEIWSEDFLPSMPPEEYKLQKYEQTKILTMQDLGIEPTPIEKIAFEFMQIYRA-GGHFARVQGYH 397          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: EJK62913.1 (hypothetical protein THAOC_16455 [Thalassiosira oceanica])

HSP 1 Score: 274.6 bits (701), Expect = 4.400e-70
Identity = 151/360 (41.94%), Postives = 214/360 (59.44%), Query Frame = 0
Query:   28 GPGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTK-----HMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEA-GIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPS----------SKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            G GG++S AG+  ++FG TGFLG+Y+   +G  G  +Y+ NRGDE   R  +  F+LG+     YS RD  S+  V+  +DV IN IGKYYDTK     +  PY   +      V+  + E ++E PA++AE+   + V++ +HVS+  A+PES+  W   K +GE+ +   +P ATIVRP +LFG EDRLLNWFA  A+    VPL +GG AL QP +V DV  A+ +I++ PE +EG+  +  G  ++++ EL  FT D+T Q P +VDLP  V +  +  L+   NP+LT D   LMS D + E S           K  T KDL +  TP+EK+AF YL+R+R  GGHF    GYH
Sbjct:   42 GRGGKASDAGVKVAVFGATGFLGRYVCSNLGANGTMVYIGNRGDEFSHRHLRTMFELGRSKFSFYSSRDTQSMADVIADADVVINLIGKYYDTKALEDTNKFPYLNYK------VSTSIHEANVEVPAKIAELCTDMQVDNLIHVSSAAANPESSSEWARFKYEGEQEVLKAYPWATIVRPTQLFGHEDRLLNWFANFADRFPFVPLVDGGHALTQPVWVDDVARAINRIVDQPEMFEGRRLDCFGPQDYSYAELAKFTNDITGQDPNLVDLPSDVMKYPARILQFEGNPMLTPDLVNLMSEDYLPELSEEGYANQLQKDKIFTMKDLGVTATPIEKIAFKYLHRFR-KGGHFILQSGYH 394          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: XP_009834341.1 (hypothetical protein H257_09719 [Aphanomyces astaci] >ETV76216.1 hypothetical protein H257_09719 [Aphanomyces astaci])

HSP 1 Score: 274.2 bits (700), Expect = 5.800e-70
Identity = 137/343 (39.94%), Postives = 214/343 (62.39%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR+S + ITA++FG TGF+G+Y+  ++G  G  +    RGD+ +VR  KV  DLG  A +P+S+RD+DSI+  + GS+V IN IGK+Y+TKH +P+          +N+  +++H++A   +AEV   + V   +H S+L A P S   W A+K +GE A++  FP A IVR   ++GPEDR LNW+A+   A  +PL + G A LQP  V+DV  A+  +I D    +G+TFEL G+  ++ +E++D+ LDVT   P++++LPL V EV    ++ LP P  + D A  +S D +   +S     ++L ++P+ +EK +F++L++Y   GGHF   EGYH
Sbjct:   15 PPGRASGSPITATVFGATGFVGRYVCAQLGYTGATVVTPYRGDDMEVRHLKVNGDLGTVAHVPFSVRDKDSIREAIAGSNVVINLIGKHYETKHALPWW---------INYTYDDVHVDAARDIAEVCAELNVPRLIHFSSLLAKPNSPSIWAASKYRGEVAVRKAFPNANIVRSATIYGPEDRFLNWYARLGSA--IPLVDNGAARLQPVNVNDVAKALYALIVD-TTIQGQTFELVGDEEYSTKEIVDYVLDVTQSDPQLLNLPLPVAEVVGKVIQNLPEPKFSQDLAIRLSLDEV--KTSSLPGLRELQVEPSKMEKESFSFLFKY-NKGGHFQKVEGYH 342          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: GAX12543.1 (NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9 [Fistulifera solaris])

HSP 1 Score: 273.1 bits (697), Expect = 1.300e-69
Identity = 153/386 (39.64%), Postives = 228/386 (59.07%), Query Frame = 0
Query:    3 STRFLSRRGLSGVAAGQL-EKGFKDFGPGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLS-NVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAE-AGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVI--LEPSSKA------------MTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            ++R ++R   S + A  L E+   + GPGGRSS A    +LFG +GFLGKY+  E+G  GY  Y ANRGD+ ++R  K++FDLG+   + YS RD+ SI+ V+  +DV +N IGKYY++    PY  ++   +S   N+   E ++     +AE+ + + V+H +HVS+  A PE+   W  TK +GE A+K  FP ATIVRP +LFG ED L+NWFA+ A    +VPL NGG +L QP +V DV   +++I +DP  + G++ +  G  ++++ EL  F  DVT +   I +LP    +  +  L+   NP++T D  +L   D +  L P   A            +T KDL ++ TPLEK+ F+YL+ YR +GGHF   EGYH
Sbjct:    7 ASRNITRNFSSSLYAPTLTERRPGEAGPGGRSSEAARKVALFGASGFLGKYVSSELGTNGYMAYFANRGDDMEMRHCKLSFDLGRTRFVFYSPRDKASIEEVIADADVVVNMIGKYYESGQ--PYQIDKFPYVSYRKNYSFAETNVTIARTIAEICREMQVDHLVHVSSASARPEARSEWSRTKFEGEMAVKEAFPWATIVRPTQLFGQEDTLMNWFARMARWHKMVPLVNGGRSLTQPVFVGDVAKTILRICDDPAKFAGRSIDCFGPTDYSYHELATFANDVTERNKPIFNLPYDWYKRIAQVLQYQRNPLITPDLVELWMEDFLPRLAPDQYAQQPGGVLDPNYVLTMKDLGVEATPLEKIVFSYLHHYR-EGGHFFKVEGYH 389          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: GAY01508.1 (NADH dehydrogenase [Pythium insidiosum])

HSP 1 Score: 271.6 bits (693), Expect = 3.700e-69
Identity = 142/343 (41.40%), Postives = 207/343 (60.35%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR    GITA++FG TG LG+Y+  E+G+ G  + L  RGDE +VR  K+  DLG  A++ +  RD DSI+  ++G+DV IN IGK+Y TKH++P+          +N+  +++H++    +AEVA   GV  F+H S++ A P S   W A+K +GE A+K  FP ATIVR   +FGPEDRLL W A+    G VPL + GEA+LQP +V+DV   +  I +D E  + +TFE  G+  +T++EL D+  D T   P++ +LPL V ++     E  P+P  T D A  +S D +   +S     ++LD++P  LEK A N+L +Y+  GGHF    GYH
Sbjct:   15 PIGRVQGNGITAAVFGCTGSLGRYVCAELGRKGNTMVLPYRGDETEVRHLKLMADLGNVANVQFDPRDRDSIREAVKGADVVINLIGKHYQTKHILPWW---------INYTYDDVHVDVARTIAEVAAEEGVPRFIHHSSILATPNSPSIWAASKYRGELAVKKAFPKATIVRSSAMFGPEDRLLTWTAERMLTGGVPLVDNGEAVLQPVFVNDVALGIYAISQD-ETIQDETFEFVGDEEYTYKELADYVFDATKHDPQLFNLPLPVAQMIGKFCENFPDPKFTSDWAVRLSLDQV--KTSNLPGLRELDVEPAKLEKEAPNFLIKYK-PGGHFQEVSGYH 344          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: GAX94049.1 (NADH dehydrogenase [Pythium insidiosum])

HSP 1 Score: 271.6 bits (693), Expect = 3.700e-69
Identity = 142/343 (41.40%), Postives = 207/343 (60.35%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR    GITA++FG TG LG+Y+  E+G+ G  + L  RGDE +VR  K+  DLG  A++ +  RD DSI+  ++G+DV IN IGK+Y TKH++P+          +N+  +++H++    +AEVA   GV  F+H S++ A P S   W A+K +GE A+K  FP ATIVR   +FGPEDRLL W A+    G VPL + GEA+LQP +V+DV   +  I +D E  + +TFE  G+  +T++EL D+  D T   P++ +LPL V ++     E  P+P  T D A  +S D +   +S     ++LD++P  LEK A N+L +Y+  GGHF    GYH
Sbjct:   15 PIGRVQGNGITAAVFGCTGSLGRYVCAELGRKGNTMVLPYRGDETEVRHLKLMADLGNVANVQFDPRDRDSIREAVKGADVVINLIGKHYQTKHILPWW---------INYTYDDVHVDVARTIAEVAAEEGVPRFIHHSSILATPNSPSIWAASKYRGELAVKKAFPKATIVRSSAMFGPEDRLLTWTAERMLTGGVPLVDNGEAVLQPVFVNDVALGIYAISQD-ETIQXETFEFVGDEEYTYKELADYVFDATKHDPQLFNLPLPVAQMIGKFCENFPDPKFTSDWAVRLSLDQV--KTSNLPGLRELDVEPAKLEKEAPNFLIKYK-PGGHFQEVSGYH 344          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: XP_002901823.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit, putative [Phytophthora infestans T30-4] >EEY57213.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 270.8 bits (691), Expect = 6.400e-69
Identity = 140/343 (40.82%), Postives = 203/343 (59.18%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR    GI A++FG TG LG+Y+   +G  G    +  RGD+ +V   +V+ DLG  A  P+  RD DSI   +EGSD+ IN IGK+Y TKH++P+          +N+  +++H++    +AEVAK  GV   +HVS+L A P S   W A+K +GE A++  FP A IVRP  +FGPEDRLL W       G VP+ + G+A++QP +V+DV  A+  I +D E  +GKTFE  G+  FT++EL D+  D+T Q   +V+LPL V +      E+ P+P  T D A  +S + +   +S     ++LD++PT LEK A N+L ++   GGHF    GYH
Sbjct:   15 PVGRVRGNGIIATVFGATGSLGRYVCAHLGTNGNGYVVPYRGDDAEVSHLRVSADLGNVAQQPFHPRDRDSILEAVEGSDIVINLIGKHYQTKHILPWW---------INYSYDDVHVDVARTIAEVAKEAGVPRMVHVSSLLAQPNSPSEWAASKFRGEVAVRKAFPEANIVRPSNMFGPEDRLLVWMGNRLNYGGVPVVDNGDAVIQPVFVNDVAKAIYHITQD-ETIQGKTFEFVGDEEFTYKELADYVFDITKQNSRLVNLPLPVAQAIGSFCEKFPDPKFTRDWATRLSLNEV--KTSDLPGLRELDVEPTKLEKEAPNFLIKFNA-GGHFQEVSGYH 344          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: OQR89355.1 (NADH dehydrogenase, ubiquinone 1 alpha subcomplex subunit [Thraustotheca clavata])

HSP 1 Score: 269.6 bits (688), Expect = 1.400e-68
Identity = 131/343 (38.19%), Postives = 210/343 (61.22%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR +   ITA++FG TGFLG+Y+  ++GK G  +    RGD+ + R  K+  DLG  A IP+S+RD+DS++  ++GSD+ IN IGK+Y+TKH++P+          +N+  +++H++A   +AEV   + +   +H S++ A P S   W A+K +GE A++  FP A IVR   ++G ED+ LNW+A     G +PL + G A LQP  V+D   A+  +  D +  EG+TFEL G+  +T +E++D+ +DVT + P +++LPL + E+     +Q P+P  T D A  M+ D +   S   +  ++L ++PT LEK AF++L+++   GGHF    GYH
Sbjct:   15 PPGRVAGTDITATVFGATGFLGRYVVAQLGKTGCTIVTPYRGDDLEPRHLKLMGDLGSIAQIPFSVRDKDSLRECVQGSDIVINLIGKHYETKHIVPWW---------INYTYDDVHVDAARDIAEVCAEMNIPRLIHFSSILAKPNSPSIWAASKYRGEVAVRKAFPKANIVRSAIMYGSEDKFLNWYANRMSTGGIPLIDNGAARLQPVNVTDAAQALYALCVD-KSIEGETFELYGDEEYTAKEIVDYIVDVTKEDPNLLNLPLPLAEIIGKVAQQFPDPKFTHDLAIRMALDQVKTGSMPGL--RELGVEPTKLEKEAFSFLFKF-NKGGHFQEVSGYH 344          
The following BLAST results are available for this feature:
BLAST of NO10G03720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008891639.12.000e-7041.40hypothetical protein PPTG_02328 [Phytophthora para... [more]
XP_024574895.12.600e-7041.69nadh dehydrogenase [Plasmopara halstedii] >CEG3852... [more]
XP_002177332.13.400e-7038.85predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK62913.14.400e-7041.94hypothetical protein THAOC_16455 [Thalassiosira oc... [more]
XP_009834341.15.800e-7039.94hypothetical protein H257_09719 [Aphanomyces astac... [more]
GAX12543.11.300e-6939.64NADH dehydrogenase (ubiquinone) 1 alpha subcomplex... [more]
GAY01508.13.700e-6941.40NADH dehydrogenase [Pythium insidiosum][more]
GAX94049.13.700e-6941.40NADH dehydrogenase [Pythium insidiosum][more]
XP_002901823.16.400e-6940.82NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
OQR89355.11.400e-6838.19NADH dehydrogenase, ubiquinone 1 alpha subcomplex ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001227NSK001227Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03720.1NO10G03720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585526gene_3840Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100463g6gene4940Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03720.1NO10G03720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03720 ID=NO10G03720|Name=NO10G03720|organism=Nannochloropsis oceanica|type=gene|length=3358bp
ATGGCCAGCACTCGCTTCCTTTCTCGAAGGGGCCTCAGTGGCGTTGCGGC
TGGGCAGCTCGAGAAGGGTTTCAAGGATTTTGGTCCCGGGGGACGCTCGT
CAGTGGCGGGCATCACAGCCTCTTTGTTTGGAGGgtgagtaagatgaggc
gagggcaaggatgattgatgatgatggagggggagggcaaggaaaagcgg
gaacaaaggacaggctagcaagtgtgccagtggccagtgcatggatgaga
ggggaagcgatgatgctctgaacatggccgggcttcgaatttcccatcct
ttcactccctcgctcaccatcttgcctgcgccctccctccctccctccct
tcctccctctttccctcccacccatcaaacgtagCACCGGCTTCCTGGGT
AAATACCTGCAGTTCGAAATGGGCAAAGTGGGCTACCGCCTCTATCTTGC
GAACCGTGGGGATGAGCAGGACGTGCGCCCCTTCAAGGTGGCCTTTGACT
TGGGCCAGgtagggagggagggagggagggaggaagggacagaggggagg
aagacttgagtgttgaagaggatgtatcgtacacctttatgtggaagaag
taagatgggtgatgatggaagatcaccttatggctggttgacgcaccact
acccttggagccattcgattgaaagaagcaggacataaaccgaccaccaa
cctcgccctccctccctccctccctccctccctcttatccgacccagTGG
GCCTCTATTCCGTACAGTATCAGGGACGAGGACTCTATCAAGCGGGTACT
GGAGGGAAGCGACGTGGCGATCAACTGCATCGgtagggagggagggaagg
aggggggggggaagataggaaggatgggagcaatacaattcaagtcgagt
gtttaaccgcataaccatctatgtataaattgtaccgataatatatgtat
gtatgtattgtatagacatatatgatactcacccactctcattcctccac
tcttagcttgcttgttgaaaagccgaagctcaattgaaggagttgtgtcg
ggagttgtggatttactcaccctcattcctacactctgtgtatacttatg
ctaccagcttcagcgaaccccacgccaagactggagtgatttacatttcc
ctccctccctccctccctccctccctccctcccatcccctttccgcagGT
AAATATTATGACACGAAGCACATGATTCCGTATCACCGCAACCGCGGGGG
CAAGCTGTCCAATGTCAATTTCCCCTTGGAAGAGATCCACATCGAGGCGC
CGGCCAGGgtaagaagggagggagggagggagggtagctctgtttcgtat
ctcatttcatttcgccaactcattcacgttttctttttccccctccctcc
cccctcatttcctccctccctccctccctcccctcccccctcgcagCTCG
CGGAGGTGGCCAAGTCGGTGGGTGTAGAGCATTTCCTCCACGTGTCGGCT
CTCGGGGCAGACCCGGAATCAAACGTCCGGTGGCTGGCGACCAAGGGCAA
Ggtgagggagggagggaggggatggtcgggtgcgtgtcactacttaaata
cactagttcatcaatgcaccaatacactcactcacccactcaccgccata
atgctccctctccctccccctccccctccctttccctctccttccagGGC
GAGGAGGCTCTGAAGAGTGTGTTTCCCACGGCCACCATCGTCCGCCCTGG
ACGACTTTTTGGGCCGGAAGACCGGCTCCTGAACTGGTTTGCGCAGgtag
ggagggagggagggagggagggagggagggggcaaggaaagagaaagagg
gcagagggacgaaaagcatgaaggaatgttgagactgtgacggacacgcg
cgaacaataataaattataattataatgtgatatatcacatgatataatt
acatgtcatttcttttggtctaataattattgattgatttgaatattaat
aatcctccaatgtactatataatccacacagGCCGCGGAAGCCGGTATCG
TCCCCCTTTTCAACGGCGgtacgtgcccccccctctctccctccctccct
ccctccctcccttttgcactcccttctgcacaagccctcatccctctcct
tccttccttcccccctccctccctccctccctccctccctccctccccta
gGCGAGGCTCTGCTCCAGCCAACGTACGTCTCGGATGTGGTTGATGCCAT
GATCAAGATCATCGAGgtagggaaggggtaagggaagggaggagggcgaa
gaagcaacaatcagtcatgaaaaaaatgtttatcgttttccctcttcctt
cctcccaccctccttccctccctcagGATCCGGAAGACTACGAGGGCAAG
ACGTTCGAGCTGGCGGGGGAGAACAATTTCACTTGGCGAGAACTGATGGA
TTTCACCCTGGATgtaaggaggggggggggagggagggaaagaggaaggg
agggagggagggaaggagggagggagggagggagagagtgagagagggag
agagggagagaggggtggtagacatagatctccgcaggtgcttgcctagt
ttaagtcaggagcaggcggatgagagacatcttggccattgattcgacgt
acaatctttggagccctgtagctcagtccctccctcactccttccctccc
tttctccctccttctctcccttccctgagacgtgccccaaacgcccacga
cctggatccgcctctaggggagtcaaggcctcaaaccaagcccttgaact
gactccctccctccctctctcgcccccccccttcctttcccagGTCACGT
ATCAAAAACCGGAGATAGTGGACTTACCTCTGGCTGTGGGGGAGGTTGCC
TCTCTTGCCCTGGAGCAGCTGCCCAACCCGGTGCTGACGGTGGATGATGC
CAAGCTCATgtacgcagggagggagggagggaaggagggaggggagggtg
ggtggtcgttaaaggccttcaactaatgtctggaggctgaccacaccctt
atatatcctctctgaccttcttccctctccctccctccctccctccctcc
ctccctcccttagGTCCACGGACGTCATCCTTGAGCCGTCTTCGAAAGCG
ATGACCTTTAAAGACCTCGACATTAAGCCTACCCCGCTGGAGAAGGTGGC
GTTCAACTACCTGTATAGgtgaggagggagggatggagggagggagggaa
gggacggtgggtagggggtgtattcaactcactggattactttttgcatg
gttttacagGTATAGGACAGACGGCGGGCATTTCCCGTACGCGGAGGGGT
ACCATTGA
back to top

protein sequence of NO10G03720.1

>NO10G03720.1-protein ID=NO10G03720.1-protein|Name=NO10G03720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MASTRFLSRRGLSGVAAGQLEKGFKDFGPGGRSSVAGITASLFGGTGFLG
KYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSI
KRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPA
RLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATI
VRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIK
IIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEV
ASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVA
FNYLYRYRTDGGHFPYAEGYH*
back to top
Synonyms
Publications