NO10G03720, NO10G03720 (gene) Nannochloropsis oceanica

Overview
NameNO10G03720
Unique NameNO10G03720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3358
Alignment locationchr10:1073487..1076844 +

Link to JBrowse

Properties
Property NameValue
DescriptionNADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 9
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1073487..1076844 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR001509Epimerase_deHydtase_N
Homology
BLAST of NO10G03720 vs. NCBI_GenBank
Match: EWM25568.1 (nadh dehydrogenase, partial [Nannochloropsis gaditana])

HSP 1 Score: 458.4 bits (1178), Expect = 2.200e-125
Identity = 220/258 (85.27%), Postives = 238/258 (92.25%), Query Frame = 0
Query:  115 GKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQ-AAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            GKYYDTKH++P HR+  GKLSNVNF LEEIHIEAPA+LAE+AKSVGV HFLHVSALGAD +S VRWLATKG+GEEALKSVFP ATIVRPGRLFGPEDRLLNWFAQ AA  G++PLFNGG ALLQPTY SDVVDAM+KIIEDPEDYEGKTFELAGE+NFTWRELMDFT D+TYQKP +VDLPLAVGE+A+  L QLPNP+LT+DDAKLMSTDVILEPSS AMTF+DL IKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH
Sbjct:   17 GKYYDTKHLVP-HRDASGKLSNVNFSLEEIHIEAPAKLAELAKSVGVSHFLHVSALGADKDSPVRWLATKGQGEEALKSVFPRATIVRPGRLFGPEDRLLNWFAQNAASFGVIPLFNGGNALLQPTYASDVVDAMVKIIEDPEDYEGKTFELAGEHNFTWRELMDFTFDITYQKPRVVDLPLAVGEMAAFGLSQLPNPLLTIDDAKLMSTDVILEPSSSAMTFQDLHIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 273          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: XP_009033150.1 (hypothetical protein AURANDRAFT_20714 [Aureococcus anophagefferens] >EGB12054.1 hypothetical protein AURANDRAFT_20714 [Aureococcus anophagefferens])

HSP 1 Score: 316.2 bits (809), Expect = 1.300e-82
Identity = 167/372 (44.89%), Postives = 236/372 (63.44%), Query Frame = 0
Query:    2 ASTRFLSRRGLSGVAAGQLEKGFKDFGPGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAA--EAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            A++ F S+   + V+  Q   G  ++G GGR SV+G+  +LFGG GFLG+Y+  EMGK+G R+ + NRG E + R  KV+FD GQ+ +  YS RDE SI  V+  ++V +N +GKYY+T++++P  R   G  SNVN+  EE++++A   +A  AK+ G   F+HVSA+ AD +S   W  TK  GE A+   FP ATIVRP  LFG EDRLLNWFA  A     +VPL + G ++LQP Y  DV   + +I  DP  Y G+  EL G   +T REL +FT DVT QK  +V +P  + + A+  +   P+P+ T D+  L + DV++ P +  +TF D  I PTP+EK+AF+YL+RYR +GGHF  A+GYH
Sbjct:   26 AASFFSSQPARAVVSPAQHRVG--EYGLGGRHSVSGVRCALFGGIGFLGRYVCSEMGKIGTRVRVGNRGCELEARHLKVSFDHGQFHAPFYSARDEASIAEVIGRANVVVNMVGKYYETRNVVPTKR-ADGAYSNVNYSYEEVNVDAARAIARQAKAAGAAGFVHVSAMAADAKSPSEWARTKAAGEAAVLEEFPEATIVRPCTLFGWEDRLLNWFAGIAGMPGALVPLVDDGASVLQPVYAVDVAKVINQITLDPTKYAGQVVELGGPAEYTRRELAEFTFDVTKQKATLVPVPAQLADFAAGFMNLAPSPMWTRDEVALETVDVVVPPGTPNLTFADFGIAPTPIEKIAFSYLHRYR-EGGHFIIAKGYH 393          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: CBJ31788.1 (NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus])

HSP 1 Score: 291.2 bits (744), Expect = 4.600e-75
Identity = 153/356 (42.98%), Postives = 219/356 (61.52%), Query Frame = 0
Query:   22 KGFKDFGPGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFA-QAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPE--DYEGKTFELAGENNFTWRELMDFTLDVTYQK--PEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDI-KPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            K    +G GGRSSV   T ++FG TGFLG+++  ++G+ G R ++ NRG E DVR  KV FDLGQ     YS  DE S++  +  +D  +N IGK+Y+TKH+  + R   G ++ VN   + ++++    LA  AK+ GV++F+HVSAL ADP+S  RW  TK  GE A+K  FP ATIVRP +LFG  DRLL W A  A   G VPL N G+ L+QP    +V   ++ II++PE  DY GK  ELAG   F+WRE+ D  LD T++    ++ ++ +       + LEQLPNP+ T D+A  MS DV+ +P+  A+T +D +I  P  +E+ A + + R+RT   HF + +GYH
Sbjct:   23 KHLGQYGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGNADTVVNLIGKHYETKHLC-FTRKEDGAINRVNSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAGELAVKEAFPEATIVRPAKLFGNNDRLLTWIALMATRMGRVPLVNDGDNLIQPIDARNVAQVLMAIIDNPENLDYRGKLVELAGPGEFSWREVADLVLDTTHRARVTDVEEMSMLFARGYGMLLEQLPNPLFTEDEALAMSVDVVQKPNPDALTLEDFNITDPFKMEECAISIVRRFRT-VQHFGFVKGYH 376          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: XP_009519370.1 (hypothetical protein PHYSODRAFT_284843 [Phytophthora sojae] >EGZ24082.1 hypothetical protein PHYSODRAFT_284843 [Phytophthora sojae])

HSP 1 Score: 288.1 bits (736), Expect = 3.900e-74
Identity = 146/343 (42.57%), Postives = 208/343 (60.64%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR S  GITA++FG TGFLG+Y+   +G  G    L  RGDE +V   +V+ DLG  A  P+  RD DSI   +EG+D+ +N IGK+Y TKH++P+          +N+  +++H++    +AEVAK  GV   +HVS+L A P S   W A+K +GE A++  FP A IVRP  +FGPEDRLL W       G VP+ N G+A++QP +V+DV  A+  I +DP   +GKTFEL G+  FT++EL D+  D+T + P +V+LPL V +      EQ P+P  T D A  +S + +   +S     ++LD++PT LEK A N+L ++   GGHF    GYH
Sbjct:   15 PAGRVSNNGITAAVFGSTGFLGRYVCAHLGTNGNAYVLPYRGDESEVSHLRVSADLGNVAQQPFHPRDRDSIFEAVEGADIVVNLIGKHYQTKHILPWW---------INYTYDDVHVDVARTIAEVAKEAGVPRMVHVSSLLAQPNSPSEWAASKFRGEVAVRKAFPEANIVRPSNMFGPEDRLLVWIGNRLNYGGVPVVNNGDAVIQPVFVNDVAKAIYHITQDP-TIQGKTFELVGDEEFTYKELADYVFDITKRNPSLVNLPLPVAQAIGYFCEQFPDPKFTRDWATRLSLNEV--KTSDLPGLRELDVEPTKLEKEAPNFLLKF-NPGGHFQEVSGYH 344          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: XP_008876068.1 (hypothetical protein H310_11254 [Aphanomyces invadans] >ETV95367.1 hypothetical protein H310_11254 [Aphanomyces invadans])

HSP 1 Score: 281.6 bits (719), Expect = 3.600e-72
Identity = 140/343 (40.82%), Postives = 216/343 (62.97%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GRSS + ITA++FG TGF+G+Y+  ++G +G  +    RGD+ +VR  KV  DLG  A +P+S+RD+DSI+  + GS+V IN IGK+Y+TKH +P+          +N+  +++H++A   +AEV   + V   +H S+L A P S   W A+K +GE A++  FP A IVR   ++GPEDR LNW+A+   A  +PL + G A LQP  V+DV  A+  ++ D     G+TFEL G+  +T +E++D+ LDVT   P++++LPL V E+   A++ LP P  + D A  +S D +   +S    F++L ++P+ +EK AF++L++Y   GGHF   EGYH
Sbjct:   15 PPGRSSASPITATVFGATGFVGRYVCAQLGHIGATVVTPYRGDDMEVRHLKVNGDLGTVAHVPFSVRDKDSIRAAIAGSNVVINLIGKHYETKHALPWW---------INYTYDDVHVDAARDIAEVCAELNVPRLIHFSSLLAKPNSPSVWAASKYRGEIAVRKAFPNANIVRSATIYGPEDRFLNWYARLGSA--IPLIDNGAARLQPVNVNDVAKALYALVVD-TTINGQTFELVGDEEYTTKEIVDYVLDVTQSDPQLLNLPLPVAELIGKAIQNLPEPKFSQDLAVRLSLDDV--KTSSLPGFRELQVEPSKMEKEAFSFLFKY-NKGGHFQKVEGYH 342          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: POM63654.1 (NADH dehydrogenase, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 278.5 bits (711), Expect = 3.100e-71
Identity = 143/342 (41.81%), Postives = 206/342 (60.23%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGY 371
            P GR    GITA++FG TGFLG+Y+   +G  G    +  RGDE +V   +V+ DLG  A  P+  RD DSI   +EGSD+ IN IGK+Y TKH++P+          +N+  +++H++    +AEVAK  GV   +HVS+L A P S   W A+K +GE A++  FP A IVRP  +FGPEDRLL W       G VP+ + G+A++QP +V+DV  A+  I +D E  +GKTFE  G+  FT++EL D+  D+T + P +V+LPL V +      EQ P+P  T D A  +S + +   +S     ++LD++PTPLEK A N+L ++   GGHF    G+
Sbjct:   15 PVGRVRGDGITATVFGSTGFLGRYVCAHLGLNGNGYVVPYRGDETEVSHLRVSADLGNVAQQPFHPRDRDSIFEAVEGSDIVINLIGKHYQTKHILPWW---------INYTYDDVHVDVARTIAEVAKEAGVPRMVHVSSLLAQPNSPSEWAASKFRGEVAVRKAFPDANIVRPSNMFGPEDRLLVWIGNRLNYGGVPVVDNGDAVIQPVFVNDVAKAIYHITQD-ETIQGKTFEFVGDEEFTYKELADYVFDITKRNPRLVNLPLPVAQAIGYFCEQFPDPKFTRDWATRLSLNEV--KTSDLPGLRELDVEPTPLEKEAPNFLLKF-NPGGHFQEVSGF 343          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: ETK90070.1 (hypothetical protein L915_06079 [Phytophthora parasitica])

HSP 1 Score: 278.1 bits (710), Expect = 4.000e-71
Identity = 143/343 (41.69%), Postives = 205/343 (59.77%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR    GITA++FG TGFLG+Y+   +G  G    +  RGD+ +V   +V+ DLG  A  P+  RD DSI   +EGSD+ IN +GK+Y TKHM+P+          +N+  +++H++    +AEVAK  GV   +HVS+L A P S   W A+K +GE A++  FP A IVRP  +FGPEDRLL W       G +P+ + G+A++QP +V+DV  A+  I +D E  +GKTFE  G+  FT++EL D+  D+T Q   +V+LPL V +      EQ P+P  T D A  +S + I   +S     ++LD++PT LEK A NY+ ++   GGHF    GYH
Sbjct:   43 PVGRVRGNGITATVFGATGFLGRYVCAHLGINGNGYVVPYRGDDLEVAHLRVSADLGNVAQQPFHPRDRDSIFEAVEGSDIVINLVGKHYQTKHMLPWW---------INYTYDDVHVDVARTIAEVAKEAGVPRMVHVSSLLAQPNSPSEWAASKFRGEVAVRKAFPEANIVRPSNMFGPEDRLLVWMGNRLSYGGIPVVDNGDAVIQPVFVNDVAKAIYHITQD-ETIQGKTFEFVGDEEFTYKELADYVFDITKQNSRLVNLPLPVAQAIGYFCEQFPDPKFTRDWATRLSLNEI--KTSDLPGLRELDVEPTKLEKEAPNYMIKF-NPGGHFQEVSGYH 372          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: KUF78455.1 (NADH dehydrogenase 1 alpha subcomplex subunit 9 [Phytophthora nicotianae])

HSP 1 Score: 278.1 bits (710), Expect = 4.000e-71
Identity = 143/343 (41.69%), Postives = 205/343 (59.77%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR    GITA++FG TGFLG+Y+   +G  G    +  RGD+ +V   +V+ DLG  A  P+  RD DSI   +EGSD+ IN +GK+Y TKHM+P+          +N+  +++H++    +AEVAK  GV   +HVS+L A P S   W A+K +GE A++  FP A IVRP  +FGPEDRLL W       G +P+ + G+A++QP +V+DV  A+  I +D E  +GKTFE  G+  FT++EL D+  D+T Q   +V+LPL V +      EQ P+P  T D A  +S + I   +S     ++LD++PT LEK A NY+ ++   GGHF    GYH
Sbjct:   15 PVGRVRGNGITATVFGATGFLGRYVCAHLGINGNGYVVPYRGDDLEVAHLRVSADLGNVAQQPFHPRDRDSIFEAVEGSDIVINLVGKHYQTKHMLPWW---------INYTYDDVHVDVARTIAEVAKEAGVPRMVHVSSLLAQPNSPSEWAASKFRGEVAVRKAFPEANIVRPSNMFGPEDRLLVWMGNRLSYGGIPVVDNGDAVIQPVFVNDVAKAIYHITQD-ETIQGKTFEFVGDEEFTYKELADYVFDITKQNSRLVNLPLPVAQAIGYFCEQFPDPKFTRDWATRLSLNEI--KTSDLPGLRELDVEPTKLEKEAPNYMIKF-NPGGHFQEVSGYH 344          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: ETI50187.1 (hypothetical protein F443_06198 [Phytophthora parasitica P1569] >ETP19951.1 hypothetical protein F441_06208 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 277.7 bits (709), Expect = 5.200e-71
Identity = 143/343 (41.69%), Postives = 204/343 (59.48%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR    GITA++FG TGFLG+Y+   +G  G    +  RGD+ +V   +V+ DLG  A  P+  RD DSI   +EGSD+ IN +GK+Y TKHM+P+          +N+  +++H++    +AEVAK  GV   +HVS+L A P S   W A+K +GE A++  FP A IVRP  +FGPEDRLL W       G +P+ + G+A++QP +V+DV  A+  I +D E  +GKTFE  G+  FT++EL D+  D+T Q   +V+LPL V +      EQ P+P  T D A  +S   I   +S     ++LD++PT LEK A NY+ ++   GGHF    GYH
Sbjct:   43 PVGRVRGNGITATVFGATGFLGRYVCAHLGINGNGYVVPYRGDDLEVAHLRVSADLGNVAQQPFHPRDRDSIFEAVEGSDIVINLVGKHYQTKHMLPWW---------INYTYDDVHVDVARTIAEVAKEAGVPRMVHVSSLLAQPNSPSEWAASKFRGEVAVRKAFPEANIVRPSNMFGPEDRLLVWMGNRLSYGGIPVVDNGDAVIQPVFVNDVAKAIYHITQD-ETIQGKTFEFVGDEEFTYKELADYVFDITKQNSRLVNLPLPVAQAIGYFCEQFPDPKFTRDWATRLSLSEI--KTSDLPGLRELDVEPTKLEKEAPNYMIKF-NPGGHFQEVSGYH 372          
BLAST of NO10G03720 vs. NCBI_GenBank
Match: ETL43467.1 (hypothetical protein L916_06017 [Phytophthora parasitica] >ETL96650.1 hypothetical protein L917_05895 [Phytophthora parasitica] >ETM49795.1 hypothetical protein L914_06019 [Phytophthora parasitica] >ETO78910.1 hypothetical protein F444_06264 [Phytophthora parasitica P1976] >ETP47894.1 hypothetical protein F442_06244 [Phytophthora parasitica P10297])

HSP 1 Score: 277.7 bits (709), Expect = 5.200e-71
Identity = 143/343 (41.69%), Postives = 204/343 (59.48%), Query Frame = 0
Query:   29 PGGRSSVAGITASLFGGTGFLGKYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSIKRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPARLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATIVRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIKIIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEVASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVAFNYLYRYRTDGGHFPYAEGYH 372
            P GR    GITA++FG TGFLG+Y+   +G  G    +  RGD+ +V   +V+ DLG  A  P+  RD DSI   +EGSD+ IN +GK+Y TKHM+P+          +N+  +++H++    +AEVAK  GV   +HVS+L A P S   W A+K +GE A++  FP A IVRP  +FGPEDRLL W       G +P+ + G+A++QP +V+DV  A+  I +D E  +GKTFE  G+  FT++EL D+  D+T Q   +V+LPL V +      EQ P+P  T D A  +S   I   +S     ++LD++PT LEK A NY+ ++   GGHF    GYH
Sbjct:   50 PVGRVRGNGITATVFGATGFLGRYVCAHLGINGNGYVVPYRGDDLEVAHLRVSADLGNVAQQPFHPRDRDSIFEAVEGSDIVINLVGKHYQTKHMLPWW---------INYTYDDVHVDVARTIAEVAKEAGVPRMVHVSSLLAQPNSPSEWAASKFRGEVAVRKAFPEANIVRPSNMFGPEDRLLVWMGNRLSYGGIPVVDNGDAVIQPVFVNDVAKAIYHITQD-ETIQGKTFEFVGDEEFTYKELADYVFDITKQNSRLVNLPLPVAQAIGYFCEQFPDPKFTRDWATRLSLSEI--KTSDLPGLRELDVEPTKLEKEAPNYMIKF-NPGGHFQEVSGYH 379          
The following BLAST results are available for this feature:
BLAST of NO10G03720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25568.12.200e-12585.27nadh dehydrogenase, partial [Nannochloropsis gadit... [more]
XP_009033150.11.300e-8244.89hypothetical protein AURANDRAFT_20714 [Aureococcus... [more]
CBJ31788.14.600e-7542.98NADH dehydrogenase (ubiquinone) [Ectocarpus silicu... [more]
XP_009519370.13.900e-7442.57hypothetical protein PHYSODRAFT_284843 [Phytophtho... [more]
XP_008876068.13.600e-7240.82hypothetical protein H310_11254 [Aphanomyces invad... [more]
POM63654.13.100e-7141.81NADH dehydrogenase, partial [Phytophthora palmivor... [more]
ETK90070.14.000e-7141.69hypothetical protein L915_06079 [Phytophthora para... [more]
KUF78455.14.000e-7141.69NADH dehydrogenase 1 alpha subcomplex subunit 9 [P... [more]
ETI50187.15.200e-7141.69hypothetical protein F443_06198 [Phytophthora para... [more]
ETL43467.15.200e-7141.69hypothetical protein L916_06017 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001227NSK001227Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03720.1NO10G03720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585526gene_3840Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100463g6gene4940Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03720.1NO10G03720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03720 ID=NO10G03720|Name=NO10G03720|organism=Nannochloropsis oceanica|type=gene|length=3358bp
ATGGCCAGCACTCGCTTCCTTTCTCGAAGGGGCCTCAGTGGCGTTGCGGC
TGGGCAGCTCGAGAAGGGTTTCAAGGATTTTGGTCCCGGGGGACGCTCGT
CAGTGGCGGGCATCACAGCCTCTTTGTTTGGAGGgtgagtaagatgaggc
gagggcaaggatgattgatgatgatggagggggagggcaaggaaaagcgg
gaacaaaggacaggctagcaagtgtgccagtggccagtgcatggatgaga
ggggaagcgatgatgctctgaacatggccgggcttcgaatttcccatcct
ttcactccctcgctcaccatcttgcctgcgccctccctccctccctccct
tcctccctctttccctcccacccatcaaacgtagCACCGGCTTCCTGGGT
AAATACCTGCAGTTCGAAATGGGCAAAGTGGGCTACCGCCTCTATCTTGC
GAACCGTGGGGATGAGCAGGACGTGCGCCCCTTCAAGGTGGCCTTTGACT
TGGGCCAGgtagggagggagggagggagggaggaagggacagaggggagg
aagacttgagtgttgaagaggatgtatcgtacacctttatgtggaagaag
taagatgggtgatgatggaagatcaccttatggctggttgacgcaccact
acccttggagccattcgattgaaagaagcaggacataaaccgaccaccaa
cctcgccctccctccctccctccctccctccctcttatccgacccagTGG
GCCTCTATTCCGTACAGTATCAGGGACGAGGACTCTATCAAGCGGGTACT
GGAGGGAAGCGACGTGGCGATCAACTGCATCGgtagggagggagggaagg
aggggggggggaagataggaaggatgggagcaatacaattcaagtcgagt
gtttaaccgcataaccatctatgtataaattgtaccgataatatatgtat
gtatgtattgtatagacatatatgatactcacccactctcattcctccac
tcttagcttgcttgttgaaaagccgaagctcaattgaaggagttgtgtcg
ggagttgtggatttactcaccctcattcctacactctgtgtatacttatg
ctaccagcttcagcgaaccccacgccaagactggagtgatttacatttcc
ctccctccctccctccctccctccctccctcccatcccctttccgcagGT
AAATATTATGACACGAAGCACATGATTCCGTATCACCGCAACCGCGGGGG
CAAGCTGTCCAATGTCAATTTCCCCTTGGAAGAGATCCACATCGAGGCGC
CGGCCAGGgtaagaagggagggagggagggagggtagctctgtttcgtat
ctcatttcatttcgccaactcattcacgttttctttttccccctccctcc
cccctcatttcctccctccctccctccctcccctcccccctcgcagCTCG
CGGAGGTGGCCAAGTCGGTGGGTGTAGAGCATTTCCTCCACGTGTCGGCT
CTCGGGGCAGACCCGGAATCAAACGTCCGGTGGCTGGCGACCAAGGGCAA
Ggtgagggagggagggaggggatggtcgggtgcgtgtcactacttaaata
cactagttcatcaatgcaccaatacactcactcacccactcaccgccata
atgctccctctccctccccctccccctccctttccctctccttccagGGC
GAGGAGGCTCTGAAGAGTGTGTTTCCCACGGCCACCATCGTCCGCCCTGG
ACGACTTTTTGGGCCGGAAGACCGGCTCCTGAACTGGTTTGCGCAGgtag
ggagggagggagggagggagggagggagggggcaaggaaagagaaagagg
gcagagggacgaaaagcatgaaggaatgttgagactgtgacggacacgcg
cgaacaataataaattataattataatgtgatatatcacatgatataatt
acatgtcatttcttttggtctaataattattgattgatttgaatattaat
aatcctccaatgtactatataatccacacagGCCGCGGAAGCCGGTATCG
TCCCCCTTTTCAACGGCGgtacgtgcccccccctctctccctccctccct
ccctccctcccttttgcactcccttctgcacaagccctcatccctctcct
tccttccttcccccctccctccctccctccctccctccctccctccccta
gGCGAGGCTCTGCTCCAGCCAACGTACGTCTCGGATGTGGTTGATGCCAT
GATCAAGATCATCGAGgtagggaaggggtaagggaagggaggagggcgaa
gaagcaacaatcagtcatgaaaaaaatgtttatcgttttccctcttcctt
cctcccaccctccttccctccctcagGATCCGGAAGACTACGAGGGCAAG
ACGTTCGAGCTGGCGGGGGAGAACAATTTCACTTGGCGAGAACTGATGGA
TTTCACCCTGGATgtaaggaggggggggggagggagggaaagaggaaggg
agggagggagggaaggagggagggagggagggagagagtgagagagggag
agagggagagaggggtggtagacatagatctccgcaggtgcttgcctagt
ttaagtcaggagcaggcggatgagagacatcttggccattgattcgacgt
acaatctttggagccctgtagctcagtccctccctcactccttccctccc
tttctccctccttctctcccttccctgagacgtgccccaaacgcccacga
cctggatccgcctctaggggagtcaaggcctcaaaccaagcccttgaact
gactccctccctccctctctcgcccccccccttcctttcccagGTCACGT
ATCAAAAACCGGAGATAGTGGACTTACCTCTGGCTGTGGGGGAGGTTGCC
TCTCTTGCCCTGGAGCAGCTGCCCAACCCGGTGCTGACGGTGGATGATGC
CAAGCTCATgtacgcagggagggagggagggaaggagggaggggagggtg
ggtggtcgttaaaggccttcaactaatgtctggaggctgaccacaccctt
atatatcctctctgaccttcttccctctccctccctccctccctccctcc
ctccctcccttagGTCCACGGACGTCATCCTTGAGCCGTCTTCGAAAGCG
ATGACCTTTAAAGACCTCGACATTAAGCCTACCCCGCTGGAGAAGGTGGC
GTTCAACTACCTGTATAGgtgaggagggagggatggagggagggagggaa
gggacggtgggtagggggtgtattcaactcactggattactttttgcatg
gttttacagGTATAGGACAGACGGCGGGCATTTCCCGTACGCGGAGGGGT
ACCATTGA
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protein sequence of NO10G03720.1

>NO10G03720.1-protein ID=NO10G03720.1-protein|Name=NO10G03720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MASTRFLSRRGLSGVAAGQLEKGFKDFGPGGRSSVAGITASLFGGTGFLG
KYLQFEMGKVGYRLYLANRGDEQDVRPFKVAFDLGQWASIPYSIRDEDSI
KRVLEGSDVAINCIGKYYDTKHMIPYHRNRGGKLSNVNFPLEEIHIEAPA
RLAEVAKSVGVEHFLHVSALGADPESNVRWLATKGKGEEALKSVFPTATI
VRPGRLFGPEDRLLNWFAQAAEAGIVPLFNGGEALLQPTYVSDVVDAMIK
IIEDPEDYEGKTFELAGENNFTWRELMDFTLDVTYQKPEIVDLPLAVGEV
ASLALEQLPNPVLTVDDAKLMSTDVILEPSSKAMTFKDLDIKPTPLEKVA
FNYLYRYRTDGGHFPYAEGYH*
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Synonyms
Publications