NO10G03260, NO10G03260 (gene) Nannochloropsis oceanica

Overview
NameNO10G03260
Unique NameNO10G03260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length7391
Alignment locationchr10:914540..921930 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:914540..921930 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO10G03260 vs. NCBI_GenBank
Match: EWM20992.1 (hypothetical protein Naga_100211g8 [Nannochloropsis gaditana])

HSP 1 Score: 66.2 bits (160), Expect = 2.700e-7
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0 
Query:  320 RPAYRAVANVLLPALRRSGLLAPECQVYLPFLNLYDGVENVFERVMADRTMAPVMVSERENP 382
            R AYRAV   LL A++ SGLLAP C V+L +L   DGV+NV+E + AD ++AP +V+ R +P
Sbjct:    3 RKAYRAVVLDLLVAVQASGLLAPRCHVFLSYLKPVDGVDNVYEAIPADASVAPTLVTARLSP 64
The following BLAST results are available for this feature:
BLAST of NO10G03260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM20992.12.700e-751.61hypothetical protein Naga_100211g8 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03260.1NO10G03260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03260.1NO10G03260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03260 ID=NO10G03260|Name=NO10G03260|organism=Nannochloropsis oceanica|type=gene|length=7391bp
GGAAAACCTTCGCTTCCCTTGCCCTGATCAATTCGACCCTCCCTGCTGAA
AGGGGAAGGTTGACTAGTTTGAGCATCATCTTTCAGGAGGGACTGGGACG
GCTTTATGTTCATGCACTCTTTGTTGACTTTCCCAGACCCACTCGTACGA
AATGGTTCGCCTTGCTTGTCATGCTCGTTGTCTCACACCCTCGCCATCCC
TTTATTCTCCTTTCTTTCATCGCCGTAATCAAACGTTCTCCTCCTCGTGT
TTTGAATGCATTGCGTATCAGACACACGCATTTGATTCAGCCGGGATGTT
CATCATTATAGCTTGCTTGCTGCGCGAGCTTAGTCGCATCTGTCAGTTTG
ATCTCACAAAGGACAGCCCCCCCTACACAACAGCCCGTGCTCGTCTTGAT
CATCACGGGGACATTTTTGGCGCTCCGCGCGTTGCTATTTGTAAAGGGGC
ATCAGCGCTGGAAGGGGAAAAGATCTAGGGCACGAAAGGACACAGTTGTC
ACCGTCCTGCAACAACGATCCACCGCCAACACCCTATTCTTTACATGCCC
ACAAACAGGTGCTTCTTCAGTGCCACAGCAGGAGCAGGAGCAGGAGCAGG
AGCAGGAGCAGGAAGAAAAACAGGAGCAGCAGCGACACCATTTTTATCAC
ACCAGTGAAGACCAGATTTATCACAAACATGGGCGACGCGGACAATTACT
ACCAAAACCTCCAAACCCGCCGTCGAGCCGACCACCACGTTTCAACCAAC
TCCGCGACAGCTTCCTCCCTTGGTGGAGGGGGAAATGCTGCTGCAAGAGG
CGAAAGCCCTCAGCTTTTTGTGGCACCGTGTCATGCAATCTGCCAGCAAG
AGACCGAAATTAACTCGAAGTCTGCTGATTCAAAGGACCGGAAGGTGGAC
GAGGACGTGGTAGGAAAAAAGAAGAACGACGACGAGATGGTCTCTATTAC
CATCCACCCGCCCGTCCTGACGCCAGGGAAGATTACGGACATGACCAAGC
AGCAGCAGACAGCAGGGGATAAAAGAGACAGTGGTGGTAGGGTGAAGGAG
AAGAAGGAGGCGGAGTGCGCTTCTATTCCCCCCATCGTAACCAGAGACAT
TCGCACGCAGAGCAGGCCTGCTGCCCCGAAAAGCTGTACCTCTGCCAGTG
AGGCCACGCACCAGCGACGGGCGAAAAGGTCTCTGCCTCTTCCGAGCGCC
CCTGTCTCTCGCATCCGCACGCGGCAATACGATAGGATGTTACCCATAGA
GGACGAGACCATGGCCGAAGAAAGGGAGACTGACATAGAGCCGAATGGGC
TCCGGGTTGGTTTGTGCTTGGGCATGATTCGAATGACGGATAAATTTATG
GAATGCTACGAGGGGTGCGCAGACCCGATGCTGGACGTGGCTGCCGCAAG
AGATACCTCGCGGATGCGAATTTTGGAGAAAGAGgtaggtggaatggagg
aaagggaggacgcggacgaaggttctcaatcgctttgtacgtgggggccg
ccatcgtgataccgtccatccacctctctctctctctctctctctctctc
tctctctctttcgctctctctctcattctctatttcactagACGGGCATG
GATATAATCGCCTTATGCGACTCGCGGGAGTTGAGAGGGGTGGACCACGG
AGGCTTGGGAAGGCGGGAAAAGGGAAAGCATGTCTCGGGACGATTTGAAA
ACCCGCCGCTGCGGGCTATCAAGgtaagagtgacacgggaggagggagag
cggagaattatgactggctcggttcaaacttcaagacagtacacgcagac
atttgccaagctttttcgctccatttcattcaccccaccttctcctctcc
tctcacacagAGCGTGTTGGGGAAACGCAAGATCAGCTTTATCTTTGGAG
ACTACGTCCGCTTCCCCACTGCATACTTCAGGCCTGCCTACCGTGCCGTG
GCCAATGTATTGCTACCTGCCTTGAGGCGTTCAGGTCTGTTGGCGCCTGA
ATGTCAAGTGTATCTGCCTTTTCTCAACCTGTACGATGGCGTCGAAAATG
TGTTTGAGAGGGTGATGGCCGATAGGACCATGGCACCTGTAATGGTGAGC
GAGCGGGAAAATCCATTATATTGCGCGACCAAGACGTTGTTTGACGAGGA
TCACGTACACAAATGTGAGGGATTGATGCCCGGAACGTCCTTCCTACGAT
TGACGATAAAATCCGATGAAAACTAATCGACTTACTTCATTTTAAGAGGG
TGGTTTTATTCCTCGTGGAGATGACGATGACGTGTGTGTAAGAGAGAGAC
AGAGCGGAATGTGTGTTGTTTGATCGAGACATTGAATGTGGCCACGTCTA
CCAGGGGAACGTAATGGGTGGGCTGGACGTGGATGGCATGCTGCGGCGCG
TGTTTCGGGTTGTGACAGATCAAACGAGCCCAGCGTGAAGTCTGCAAGAG
TTCAAGAGCTCTATTTTAGCACGGATGTAAAAGAAGAGACAGGAGATGAA
AGGGGGGCGTGATGCTAGTGGATCCCGCACGCAGCAGTTCACGTTCACAT
GTTCAACAATGGAAACGTTTGAAAATTAGCCACCACACACATACACTTAT
GCCTATGTCACACCCGTTTATTGCTTTATCTGCTTTGCTTTCTCCGGCTT
GCTGCGTTTAGCCCAATATTCGAATACTGAGAAGCTCGTCGTGTAGAATG
TTTGACGAATCATCAAGGAACGACCCTCAGTCGAGCCAAAGTGCCAGTCG
CTATTTATTTGTTTTCCCCCCTCGGCGATGAAAATTTCCGCCACTCACAG
CGTGTAGAACTTGCTGACATCAGTTCAAAGAGAGGGCATTTATTTTACTT
TTTCTTTTCATTCAAGTTTGGTACATGCATAAGTGTTTATTCGCGTGCTT
TTCACCCTTCAATTACATAAGAATAGATACGCAAAGTAGTCGTTTGCTTC
TCCAGATGCATACATTTCCACAAACATCACATTTACACAATCATCACGTC
CCAATTCCAAATCCTTTCCTTCTCCTCCTCCTTCCCCTCTTGCCCCTGGT
GCTGTTACTGTCCTCTTACTCGGCGATATAACGCCGCTCCAAGCTATATA
TTTTCCTTCCCCTCCTCCAACCCACGCCCCTGTCATGAATTACTACATCC
CATCTTTCAGATAGAAGCAGTCGTTGTTGTCGTCAGCCTCGCTCCTGACA
CACGCAGCTTCAGCTGTCCGATTTTCCTGTGCACCCCCCTAATTAAAGGT
AATGTCCGTTCTTGCCACTCTTCATACTCTCGCAAGACTTCTCGCAATTC
CTGCAGCCGCTCCTCCTGCTGACGCCTCCTCAAACTCCCTACACTCGTGC
TGCTGCTGCTGCTCCTGTTTGGGCTGGACGGCGTTGCTTGCGACAATGCA
GAAGACGCCTGTGAGGTGGATAACGAAAGAGAAGAGGATTCGGTCGACGC
CTGCTCCTTCTTCTGCTGCCCTGGGTGGTGTCGTCGTTGTTGTTGAATGG
CTTCAAGTTCCTCTACTTCCACACGCGCTTGCTCAAATCGTTCACGCTCC
ATCATCCACCCCCGCAATCGCGCCTCCAAAATCCCCAAATCTTCCTCCTC
CTCCTTCTCTTCTACAACCCCCTCCTCCTTTAAAACATTCTGCTCCTCCT
CTTCCCTCTCTTCCACGTCCTTGTCCTCTTTTTGCTGCTGCCCGTCTATA
CCGTCGTCATTGCCGAGGTCGACTTCCTTCTCGTGTTTGTGCTTGCCTTC
ATCTCCCTCCTCTTTTCTCATTTCCATTTCTTTCATTCTCCCTCCTCTTT
CTCCAGAGCCTTCTCGGTCTTCATCTCTTCCTCTTCTAGGGGGCGCTCGG
CGTGTGCCTGCGTTGTAATAACTCCCACACACATCGGTACCAGTAGCAGG
AGCAGCAGTAGATGTAGCATAAGTAGTGATATCCGTAAGCCCTGGGAAGG
ACGATCGATTGAAAGAGGAAGAAGAGGCCAAAGGTGACGCATGGGCCGAT
AACCCGTGGGGGCTTGTGGGTGGCGAGAAAGAGGAAGAGAATGAAGGCGT
AAAGAAGGAAGGCAACATGCCTGTTCCCGGTGAGCGGCTGCTACTGCTAA
TTAGAGACGCTCCTCCCTCCCTCCCACGTGTTACCCTCCCTGCGCCATTC
AACCACTTTCCCTCCTTTTCCTCTACTGTCTCTGTGGCTAAAGAAGCCAC
CATCGCTTGCCTCCCACCAGCAAGCGCAGCAGCAGCAGGAGCAGCTGTTG
ACTCCACTACTTCAGCTGTTGACGTCATTCTGCCGCTTTCTCTCGCCATC
GCCACGCTCTCCACCTCTTTGACCTCCTGTTTTTCGTTGACCACATGGGA
ATGCATCTCTCGCAGAATCCAAGCAGGGACTTGCACTCCTTGAGCCTCCA
ACACCACCTCCAACGGCCGGCGAGGAGGAGGGCGTAGGGACCCTCGTTGG
GAGGGAGGGAGTATGGGCAATGACCGAGAGAAGGAGGACGAGGAATCGAA
GGAGGAGGGAGTTGCTGTCGGTAGGGAGGATGAGGATAATAAGGTCCGTT
CCCTAGTCGAGGCCGGTGGTGAGACTGAGGCAGCAGAAACAGATAAAAAG
GCTCTATAGCTGTGACTACTGCTACTTCTGTTTTTATTCCCACCAGAAAG
TGCAAGATGGCCCCTCCCTCCCGTCCCATACGCATTCCACCCCGCACCAT
CACCATTCCAAGGGCGAGGTGTAGGGAAATGACGCCTTCCTCCCTCCCCT
ATCTCCCCCCTGTCTCTTCTCCCTTCGAATAAAGCGGTGCAGCTCCGGCC
GTTGCTGTTCCCACCACTGATATGCCATGTAGGATAAGCAGACTGCAAGA
GCTTCAACCGACGTTCCTCTGCTTCTGTCAGTGCTCGCTGTTGCCTCTTC
TTCCGATGCCGATGCACCCAAATTCGCCACCTTTTAAATGCCCACCCTTC
CCTCCATCCCTTCCATTGCCACAATCCCTCCTTCCCTCCCTCCCTCTCTC
TCCTCTTCCGCGATTTTTGTCCGCGAGTCCAATACACCCATCGGACCAAA
GTCAGAGCTTGTCGTTGCTGCAACCACAGCCAGCGGGCCTGCACATCATT
CCTTCGATTCCATTCCTTTCGGTGCATCATCTTTTGAAAAGCCACCCATC
CCCTCTTTTGCTGCCCTTTCCACGCTGCGACCCCCACTTTCTCCCTCCCT
CGCTGACGCATGCTGATCATCGTCATCTTCGCCCACACGTCCAAGCACCG
GCGGAGACATTTTTCCTGCTGCAGCGCCAGGCCCTGATCTTCAATCTCCC
ATCGTTCCATTCTCTCCTTCACCAGAGAGAGCCATCGCCGTAACGCCCTG
CGTCGTGTCTGCTGACAGCGTGCAGCTATAAAAGCAGCACTCTCCTCCTC
CTCCTCCCTCCTCTGCTCCTCCCTAACTTTCCACATCCTCCATCCCCATC
TCAGCAGCAACCGTCCTTCTTCCCTCCTGCCCTCCCTCCTTCGTCTCATC
CAGTCCCTCCACGCATAGAAACCCTGACTCATTCTCAACGCGTACCACCA
CACCCTTCCCTCCCCCACCCCCTCTCCTGCCGCCCCTGCCACCGTGCCCA
TCCCTTCCATCCCTCCCACGCTTGACTCAGCCTCCTTTCTCTCCACCGCG
TCTCTCCTACTTCCAACCTTACCACTCCCCCTACCCTCCTCCTCGTCCGT
TCCCTCCACTGCTGCAGCGCCTTCTCACTTTTCCCCACCAAGCGGGCCAT
CTCTCCCACCTCCACCACACGGGCCAAGCTCTCCTTCACGGCACTTCTTT
TGGTACAAACGTGCAAAAAAGATGTCCATCCCTTCAATGCCAGCCTCACC
TTCCTCCAGTCCTCCCCACGCTGCATCCGTCGTTGGTGCCTCACTCCTAC
CAGCAGCAAGGCCAATGCCCTGAGCCTTCCTCTACCCTCCCTCCATTTGT
CCACATCCACACTCAACCCCTTTTTCATCATCTGCTGCTGCCATTGCTGT
CGTCGTTGGAAATGCCACGCTTTCCAACGTTTCCAACATAGAAACATCAA
TCGGAGCGCATGTCTCGTCGCTGCCACTGCCTGCCCCTCTCTCTGAACCC
CTGGTCCCTGTACTTCGACCGTCCTCCACCATCTGATCACCAGTTGTTTC
CCTTTTACCTGATGCCAAGCAGCATATACATTCAGCCTTGATTGCTGTAC
GAAGACAAGGCGCCAGCGACGGAGGCAACGGCGGGCAGCAGTGGATTGAG
CATACCCATCCAAGCATAGGAGGCGGTGACGGCGAGTGGAGGCTTGCGCT
GCGTGCAAACGAAGGGAGTGAAGGCCACGGCGACCACAAGCCAGAAACAA
TGCAATCTCTCCGTGTTGCTCGTGCTTCTCTTCGTCGGCTTGTGAAACAT
GCTGCTGGTGCTCTTGCCCGTGTTCCCCCCCCTTAGCTAACGCCGTTCGA
AGAGCCTGCCGAGCACGAGCGGCGTGGCGACTCCTATGATACGCATCAGC
TTCACCCACCGGAAGAGGGATCGCCCTGCGTGTAAAATCGGGAGAGGAAG
GACGAGAACACAACGAAGGCCGGAAACGTTCAAGGGCGTCCAGTTGCCGG
ACGAAGCCATCCTCTACCTCGTGCAAGGCATGTTGATCATTGTTATTGTT
GTCAATTTCAACGGTGTGGTCGCGCGAGCTGTTGGATGGTGGTAACGAAA
TCACTAATGGTGACGGTAATAGGGGCAGAAGGGAGGAGGAGACCGGGAAA
GGCTGCGTGGAGGGGGAGGAGGAGAGGCTAGAGGAGCCAGAGACGCTTCT
CCGGGGGGGAGAGAAGGGCGGCGGGGAGGACGGGATTTCAATGTCGTGCA
TAGCTGAAGCTGGAGAGGTCAGGCTCTATCTGCCAGTAGAATTGAGTTCG
TCCGGATCCTTGCTGTCGTGGTCAAGGACGGTAAAGATGAAGGCATGCTG
CCGCCTTCCTGAAATGCGTCTCACCTTCGCCAGGTCCGACAGCCCTGTGA
TGACGATAAAGATGAAACATAATGGGAAGATTGAAAGGTTTATTAAGAAA
ATGACACGGGTTGTCAAACGCTACTATTGTTAACGTAAGCTTGAGTGTGT
TGTCTTACTCATGGTGGTGATACTCTGATATAAAGCGCGCTTGCGACGTG
GGTTCCGATGGAAGCGGCGGGAACGAGAGGGGGAGGTTGTCGGCGATGTA
GAGCGTTACGACATGACATGGTCGACGACGGGAGTCAGACCCGCACAAAA
CCCGACATGAATCAACAGTATAACGCCCTGCCGATGGAGTTGTGATGCGC
TGCCTGGTACAGTGTCGACCTCCTTGGGCATACGCCACGAAATGCCCTCA
AGTAGGGTGCACCCAAGAGAAACAAGCCGAGTAAGTCATGG
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protein sequence of NO10G03260.1

>NO10G03260.1-protein ID=NO10G03260.1-protein|Name=NO10G03260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=418bp
MGDADNYYQNLQTRRRADHHVSTNSATASSLGGGGNAAARGESPQLFVAP
CHAICQQETEINSKSADSKDRKVDEDVVGKKKNDDEMVSITIHPPVLTPG
KITDMTKQQQTAGDKRDSGGRVKEKKEAECASIPPIVTRDIRTQSRPAAP
KSCTSASEATHQRRAKRSLPLPSAPVSRIRTRQYDRMLPIEDETMAEERE
TDIEPNGLRVGLCLGMIRMTDKFMECYEGCADPMLDVAAARDTSRMRILE
KETGMDIIALCDSRELRGVDHGGLGRREKGKHVSGRFENPPLRAIKSVLG
KRKISFIFGDYVRFPTAYFRPAYRAVANVLLPALRRSGLLAPECQVYLPF
LNLYDGVENVFERVMADRTMAPVMVSERENPLYCATKTLFDEDHVHKCEG
LMPGTSFLRLTIKSDEN*
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Synonyms
Publications