NO10G03250, NO10G03250 (gene) Nannochloropsis oceanica

Overview
NameNO10G03250
Unique NameNO10G03250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1470
Alignment locationchr10:913058..914527 +

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Properties
Property NameValue
DescriptionDnase domain containing 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:913058..914527 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016788hydrolase activity, acting on ester bonds
GO:0016788hydrolase activity, acting on ester bonds
Vocabulary: INTERPRO
TermDefinition
IPR032466Metal_Hydrolase
IPR001130TatD_family
Homology
BLAST of NO10G03250 vs. NCBI_GenBank
Match: OUM59882.1 (hypothetical protein PIROE2DRAFT_46697 [Piromyces sp. E2])

HSP 1 Score: 156.4 bits (394), Expect = 1.400e-34
Identity = 100/292 (34.25%), Postives = 147/292 (50.34%), Query Frame = 0
Query:    2 FDVHAHLTAPELLPH-LESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHP----------------EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            FD HAH+ +P      +  L+ +A    V  I+ V+E  +D   VL +      + L   LGLHP                  + L+ +  +L LI+ H  E+ CIGE+GLDYSP  L  K+ E  K IQ++  ++Q+ LA E ++ +NVHSRSAGH+A+  L                      K     + HA+DGK  Y   A    +   YFS+PP  +R P   K +  LPL+R++LETD PAL+P K  +N   N+ +S E +   KG+ +EE+ + T  NA +LF
Sbjct:    5 FDCHAHINSPSFSKEAISDLVKKAQEKNVKGIISVTETYEDCLDVLNVVMQYPNIIL-PGLGLHPIQPLVDENGQRLDKGGRSSTLDEVYPILDLIKEHKDEIVCIGEVGLDYSPQFL--KNVEEEKEIQKQIFQKQIELANEYNIPLNVHSRSAGHYAIETL--------------------ISKNAKNVLLHAFDGKPGY---ALKGLQAGYYFSIPPSIRRSPQKQKLVKNLPLDRIILETDSPALSPEKNTINESSNVVISCEEIAKIKGISVEEVARITNENAIKLF 270          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: ORX53948.1 (putative deoxyribonuclease TATDN3-like protein, partial [Hesseltinella vesiculosa])

HSP 1 Score: 155.2 bits (391), Expect = 3.100e-34
Identity = 104/290 (35.86%), Postives = 147/290 (50.69%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHPEYACLE------------ALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGE--KHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            M DVHAH+T       LE LLA+A  A V  I+ VSE++ D+A VL +     G+ +  ALGLHP  +C +            A   ML         + C+GE+GLD+S HVL +     E  + IQ+   ++Q+ +A++  + +NVHSRSAGHHAL +L+E  A                         HA+DGKA + +      E   YFS+PP   R     K    +P+ +LLLE+D PALAP KG+ N PKN+  +   V   KG+ +EE++  T  N   LF
Sbjct:    1 MIDVHAHITESN-FSDLERLLADAKDAKVQHIISVSESIHDSASVLRIAQQSNGM-IWPALGLHPVQSCPDGSYRSVIWDDWIAFKPMLQR-AIDTKAIVCVGEVGLDFSYHVLDKDANIQEEQRKIQRMIFKEQIEMAIQAGLPLNVHSRSAGHHALKVLKECDAKLVN--------------------MHAFDGKASHVKVG---LEAGYYFSIPPSMVRLEQQEKLAKLVPMHQLLLESDAPALAPVKGETNEPKNIIFAARGVASVKGISVEEVISITVGNTLSLF 264          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: ORX65448.1 (Mg-dependent DNase [Anaeromyces robustus])

HSP 1 Score: 153.7 bits (387), Expect = 9.000e-34
Identity = 101/292 (34.59%), Postives = 146/292 (50.00%), Query Frame = 0
Query:    2 FDVHAHLTAPEL-LPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHP----------------EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            FD HAH+ +P     ++E ++ +A    V  I+ V+E  +D   VL +      + L   +GLHP                  + L+ +  +L LI+ H  E+ CIGE+GLDYSP  L  K+ E  KIIQ++   +Q+ LA EL++ +NVHSRSAGH+A+  L E                    K     V HA+DGK  YA+      +   YFS+PP  +R P   K +  LPL+R+LLETD PAL+P K  +N P N+ +S E +   K +           NA +LF
Sbjct:    6 FDCHAHINSPSFSKENIEIIVNKAKEKNVKGIISVAETYEDCLDVLNVAKQYSKIIL-PGIGLHPIQPLVDENGQRLDKGGRSSTLDEVYPVLDLIKEHQKEIVCIGEVGLDYSPQFL--KNVEEEKIIQKQIFEKQIELANELNIPLNVHSRSAGHYAIETLIE--------------------KNAKNVVLHAFDGKPGYAQ---KGLQAGFYFSIPPSIKRSPQKQKLVNILPLDRILLETDSPALSPEKNTINEPSNVIISCEEIARIKNIXXXXXXXXXXENALKLF 271          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: ORX56522.1 (putative deoxyribonuclease TATDN3-like protein [Piromyces finnis])

HSP 1 Score: 151.8 bits (382), Expect = 3.400e-33
Identity = 98/292 (33.56%), Postives = 148/292 (50.68%), Query Frame = 0
Query:    2 FDVHAHLTAPELLPH-LESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHP----------------EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            FD HAH+ +P      + +L+ +A    +  I+ V+E  +D   VL +      + L   LGLHP                  + L+ +  +L LI+ H  E+ CIGE+GLDYSP  L  K+ E  K IQ+E   +Q+ LA E ++ +NVHSRSAGH+A+  L                      K     + HA+DGK+ Y        E   YFS+PP  +R P   K +  LPL+R++LETD PAL+  KG +N   N+ +S E +   KG+ +E++++ T  N+ +LF
Sbjct:    5 FDCHAHINSPSFSKEAISNLIKKAQEKHIKGIISVTETYEDCIDVLNVAKQYPNILL-PGLGLHPIQPLIDENGKRLDKGGRSSTLDEVYPILDLIKKHKEEIVCIGEVGLDYSPQFL--KNVEEEKKIQKEIFEKQIDLANEYNIPLNVHSRSAGHYAIETL--------------------INKNAKNVLLHAFDGKSGY---VLKGLEAGYYFSIPPSIKRSPQKQKLVKILPLDRIILETDSPALSHEKGAINESSNVIISCEEIAKIKGISVEDVMKITYENSLKLF 270          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: OGB93488.1 (hypothetical protein A3H39_01500 [candidate division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22] >OGB96100.1 hypothetical protein A3G35_00705 [candidate division NC10 bacterium RIFCSPLOWO2_12_FULL_66_18])

HSP 1 Score: 151.0 bits (380), Expect = 5.900e-33
Identity = 107/281 (38.08%), Postives = 141/281 (50.18%), Query Frame = 0
Query:    2 FDVHAHLTAPELLPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHPEYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAV-FHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLFGLGFA 282
            FD HAHL + +    L ++LA A + GV  I+ V E L++A  +LAL      ++   A GL P      A  A++  I  H   L  +GE+GLD+     G K  EA   +Q+E + + V ++ EL + +NVHSRSAG H +A LRE                     RGAR V  HA+DGK   A  A    +   +FS+PP   R     K +  LPLE LLLETD P L P     N PKN+ V+ E V   KG+  EEI + T  NA RLF   FA
Sbjct:    4 FDAHAHLASADFAQDLPAVLARADAVGVRGIVAVGETLEEAQEILALADRHPPIK--PAAGLSPTILDPTAADAVVAFIWAHADRLVAVGEVGLDH----WGVK-DEAEWKVQEEILGKFVAVSNELVLPLNVHSRSAGRHTIAFLRE---------------------RGARHVLLHAFDGK---AATALEGVQAGYFFSIPPSVVRSAQKQKLVRHLPLECLLLETDSPVLGPDPTVRNEPKNVTVACEAVAGLKGVTPEEIARITTENARRLFPRAFA 253          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: GBC13010.1 (TatD DNase family protein [Rhizophagus irregularis DAOM 181602])

HSP 1 Score: 150.6 bits (379), Expect = 7.700e-33
Identity = 106/295 (35.93%), Postives = 150/295 (50.85%), Query Frame = 0
Query:    4 VHAHLTAPELLPH--LESLLAEAHSAGVHDILVVSENLQDAALVLALP--TTQGGVR--LHKALGLHP-------EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEK---------HPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            VHAH+  P   P+  +E +L+ A +A V  I+ VSE L+DA  +L L   T    +R  +    GLHP            E  +++L  I+   +EL  IGE+GLD++PH+L              E  K IQ++ + + + L+L+LD+ +NVHSRSAGHHAL  LR+  A                     + V HA+DG+  YA       E   +FS+PP   R P   K  A +PL  LLLETD PAL P KG  N P ++ +S   +   K + +EEI Q T +NA +LF
Sbjct:   13 VHAHV-YPSSFPNTPIEEILSRAKTANVQSIVTVSETLEDAKSILGLKNGTLSDSLREMIEPCAGLHPVQPVGAMSLVSTEQANSILEFIQEKSTELVGIGEVGLDFTPHILKNAIDSNTNLNLSTEELKNIQRQVLARHIALSLQLDLPLNVHSRSAGHHALDCLRDYGA--------------------RKVVMHAFDGQLKYAR---KGIEMGFFFSIPPSIIRSPQKQKLAAEIPLTNLLLETDSPALGPTKGVDNEPNSIIISATEISRIKQIPIEEI-QQTTKNAFKLF 282          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: PKC03152.1 (Mg-dependent DNase [Rhizophagus irregularis] >PKC60029.1 Mg-dependent DNase [Rhizophagus irregularis])

HSP 1 Score: 149.8 bits (377), Expect = 1.300e-32
Identity = 104/297 (35.02%), Postives = 150/297 (50.51%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLPH--LESLLAEAHSAGVHDILVVSENLQDAALVLALP--TTQGGVR--LHKALGLHP-------EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEK---------HPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERL 276
            + DVHAH+  P   P+  +E +L+ A +A V  I+ VSE L+DA  +L L   T    +R  +    GLHP            E  +++L  I+   +EL  IGE+GLD++PH+L              E  K IQ++ + + + L+L+LD+ +NVHSRSAGHHAL  LR+  A                     + V HA+DG+  YA       E   +FS+PP   R P   K  A +PL  LLLETD PAL P KG  N P ++ +S   +   K + +EE+  +T  N ER+
Sbjct:    5 LIDVHAHV-YPSSFPNTPIEEILSRAKTANVQSIVTVSETLEDAKSILGLKNGTLSDSLREMIEPCAGLHPVQPVGAMSLVSTEQANSILEFIQEKSTELVGIGEVGLDFTPHILKNAIDSNTNLNLSTEELKNIQRQVLARHIALSLQLDLPLNVHSRSAGHHALDCLRDYGA--------------------RKVVMHAFDGQLKYAR---KGIEMGFFFSIPPSIIRSPQKQKLAAEIPLTNLLLETDSPALGPTKGVDNEPNSIIISATEISRIKQIPIEEVGNST-NNEERI 276          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: PKY27765.1 (Mg-dependent DNase [Rhizophagus irregularis])

HSP 1 Score: 149.8 bits (377), Expect = 1.300e-32
Identity = 104/297 (35.02%), Postives = 150/297 (50.51%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLPH--LESLLAEAHSAGVHDILVVSENLQDAALVLALP--TTQGGVR--LHKALGLHP-------EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEK---------HPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERL 276
            + DVHAH+  P   P+  +E +L+ A +A V  I+ VSE L+DA  +L L   T    +R  +    GLHP            E  +++L  I+   +EL  IGE+GLD++PH+L              E  K IQ++ + + + L+L+LD+ +NVHSRSAGHHAL  LR+  A                     + V HA+DG+  YA       E   +FS+PP   R P   K  A +PL  LLLETD PAL P KG  N P ++ +S   +   K + +EE+  +T  N ER+
Sbjct:   52 LIDVHAHV-YPSSFPNTPIEEILSRAKTANVQSIVTVSETLEDAKSILGLKNGTLSDSLREMIEPCAGLHPVQPVGAMSLVSTEQANSILEFIQEKSTELVGIGEVGLDFTPHILKNAIDSNTNLNLSTEELKNIQRQVLARHIALSLQLDLPLNVHSRSAGHHALDCLRDYGA--------------------RKVVMHAFDGQLKYAR---KGIEMGFFFSIPPSIIRSPQKQKLAAEIPLTNLLLETDSPALGPTKGVDNEPNSIIISATEISRIKQIPIEEVGNST-NNEERI 323          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: CDS06318.1 (hypothetical protein LRAMOSA08846 [Lichtheimia ramosa])

HSP 1 Score: 147.5 bits (371), Expect = 6.500e-32
Identity = 96/304 (31.58%), Postives = 148/304 (48.68%), Query Frame = 0
Query:    1 MFDVHAHLT------------APELLPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHP------------EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVL----GEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            M DVHAH+               +  P L+ ++  A  A +  I+ VSE++ D   +  + +T     +  A GLHP             +   E    +L        ++ C+GE+GLD++P +L    G   P+ TK +Q++  ++QV +A+E D+ VNVHSRSAGHHAL +L E  AT                    + + HA+DG+A Y + A    E   YFS+ P   R P     +  +PL  LLLE+D PAL P KG  N P NL ++   +   K + ++++++ T RNA +LF
Sbjct:    1 MIDVHAHINYVNFPRNNTMSDQDDNKPTLDMMIDHAKKASIQHIVAVSESIHDVHDIFEIASTSDNF-IWPARGLHPVQLDDNKVERSVNWHDFEMFEPVLQ-DAIQQKKICCVGEVGLDFTPRILANSNGSLTPDETKDMQRDIFKRQVQMAIEADLPVNVHSRSAGHHALDILYECKAT--------------------KVIMHAFDGRASYTKKA---VEAGYYFSIAPIVVRSPQKQTLVKNVPLSNLLLESDAPALGPEKGVDNEPANLIMAAREIARIKDISIDQVIEETTRNARQLF 279          
BLAST of NO10G03250 vs. NCBI_GenBank
Match: XP_012555676.1 (PREDICTED: putative deoxyribonuclease TATDN3 [Hydra vulgaris])

HSP 1 Score: 147.1 bits (370), Expect = 8.500e-32
Identity = 99/281 (35.23%), Postives = 136/281 (48.40%), Query Frame = 0
Query:    1 MFDVHAHLTAPELLPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPTTQGGVRLHKALGLHP-----EYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPHVLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRETAATXXXXXXXXXXXXXXXXKRGARAVFHAWDGKAHYAEAAASDTEHDIYFSVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSVEVVGIAKGMGMEEIVQATRRNAERLF 277
            M DVH H++A E       L+ EA   GV  I+ VSE   D   V+ L        ++  +G+HP     +   LEA+      I+ ++  L  IGEIGLD++P  +   +    K +Q++  ++QV LA E D+ +NVHSRSAG   + LL E  AT                    + + HA+DGK      A    E   YFSVPPC  R     K +A +PL  LLLETD PAL P     NVP N+ +S   V   K +  EE+   T +NA +LF
Sbjct:    1 MIDVHCHISASEFSEDFNDLINEAKKVGVEAIVAVSEFPSDFQKVIKLSELYPNF-IYPCIGVHPVQVSNQSVSLEAMQIAEKFIQDYNKILVGIGEIGLDFTPRYI---NSPTDKAVQRDVFQKQVALAKEYDLPINVHSRSAGRPVIDLLIEQGAT--------------------KVLLHAFDGK---ISVAIRGVEAGYYFSVPPCIVRSEQKQKLVAAIPLSNLLLETDAPALGPSITMRNVPANIMISCREVARIKNISFEEVFFQTSQNARKLF 254          
The following BLAST results are available for this feature:
BLAST of NO10G03250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OUM59882.11.400e-3434.25hypothetical protein PIROE2DRAFT_46697 [Piromyces ... [more]
ORX53948.13.100e-3435.86putative deoxyribonuclease TATDN3-like protein, pa... [more]
ORX65448.19.000e-3434.59Mg-dependent DNase [Anaeromyces robustus][more]
ORX56522.13.400e-3333.56putative deoxyribonuclease TATDN3-like protein [Pi... [more]
OGB93488.15.900e-3338.08hypothetical protein A3H39_01500 [candidate divisi... [more]
GBC13010.17.700e-3335.93TatD DNase family protein [Rhizophagus irregularis... [more]
PKC03152.11.300e-3235.02Mg-dependent DNase [Rhizophagus irregularis] >PKC6... [more]
PKY27765.11.300e-3235.02Mg-dependent DNase [Rhizophagus irregularis][more]
CDS06318.16.500e-3231.58hypothetical protein LRAMOSA08846 [Lichtheimia ram... [more]
XP_012555676.18.500e-3235.23PREDICTED: putative deoxyribonuclease TATDN3 [Hydr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001201NSK001201Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03250.1NO10G03250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|540502gene_3870Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100130g3gene4960Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03250.1NO10G03250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03250 ID=NO10G03250|Name=NO10G03250|organism=Nannochloropsis oceanica|type=gene|length=1470bp
CGTTGGATTTCTCATGCATGAATGGGCTCTCAAGATCTCTCAGCCAACGG
CAGCCGACAGACACAGGAGGTTGAGCAGTGTCTTGATGGTGGCCATGAAC
ATGCACTACACGGTGGTCGAAGTTGCTTTACGCTTGCTCAATCGAATGCA
TCCGTGATAGTTCTGCTGACTGAAAAGCTCAAAGTTATGTCGATCGCTGC
TGCGGGAGTTCTTAGTCGCCGGCTCACCAACAGCGATGTATAGGAATGAT
CATTTCTGTCGTAGCTATTCTACAATCATTCCCATTTAGCACCAGAGGCA
AGCGGAAGAATGTTCGACGTCCACGCCCATTTGACAGCACCGGAACTGCT
GCCACATTTGGAGAGCTTATTAGCAGAGGCACACAGgtaagcacgcttgc
ctcccaccctacaccctctccactccaccattatcgctccaatataatgc
cccaaatggaaagtaaagtgtaacaggctttagagatgtctatgaaagag
tcagtcagtgattttgagcagataaaacacggatttgaaatttagcgcca
tccatgctgtgcgacccgcccgaattcgacactcacactctcgccaatgc
tctccccatccatcctaatagCGCCGGCGTCCACGACATCCTGGTCGTCT
CAGAAAACTTGCAAGATGCCGCCTTGGTCCTCGCTTTACCTACCACTCAA
GGTGGTGTACGTTTACACAAGGCCTTGGGTCTCCATCCTGAATACGCATG
CCTAGAGGCCTTGTCCGCTATGCTGACGCTCATCCGAACTCATCACTCTG
AGCTCACGTGCATTGGCGAGATTGGCTTGGACTATTCTCCGCACGTCCTG
GGAGAGAAACACCCCGAGGCTACAAAAATAATACAACAGGAATGCATGCG
ACAGCAAGTCGTACTTGCCCTTGAGCTCGATATGGCTGTTAATGTCCACT
CTCGCTCGGCGGGCCACCATGCCTTGGCCTTGCTCAGGGAAACTGCAGCA
ACAGCAATTGCAGCTGCGGCTGAAGAGGGACCAGAAGGGCACGAACGAAG
AAAAAGAGGTGCTAGAGCAGTTTTTCATGCGTGGGATGGAAAGGCTCATT
ATGCTGAAGCGGCAGCCTCGGACACCGAGCACGACATTTACTTCTCCGTG
CCTCCCTGTGCTCAACGTTGCCCCTTGATGTCCAAGTGGATAGCCCGTCT
ACCTCTTGAACGGCTGCTGCTGGAAACAGATTGTCCAGCACTGGCGCCTT
TTAAAGGGGACGTTAATGTGCCAAAAAATCTTGGAGTTTCGGTTGAGGTG
GTAGGGATCGCCAAAGGAATGGGAATGGAGGAAATAGTACAGGCGACCCG
GAGGAATGCGGAGCGATTGTTTGGCTTAGGTTTTGCGACAGGGATGGACA
GAGGGTACAAAAAGTATGAGACAACTGGATAAGAGGAGAAGTAAAGTAAA
CATCTATTGTATTCGTGCGA
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protein sequence of NO10G03250.1

>NO10G03250.1-protein ID=NO10G03250.1-protein|Name=NO10G03250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=296bp
MFDVHAHLTAPELLPHLESLLAEAHSAGVHDILVVSENLQDAALVLALPT
TQGGVRLHKALGLHPEYACLEALSAMLTLIRTHHSELTCIGEIGLDYSPH
VLGEKHPEATKIIQQECMRQQVVLALELDMAVNVHSRSAGHHALALLRET
AATAIAAAAEEGPEGHERRKRGARAVFHAWDGKAHYAEAAASDTEHDIYF
SVPPCAQRCPLMSKWIARLPLERLLLETDCPALAPFKGDVNVPKNLGVSV
EVVGIAKGMGMEEIVQATRRNAERLFGLGFATGMDRGYKKYETTG*
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Synonyms
Publications