NO10G03020, NO10G03020 (gene) Nannochloropsis oceanica

Overview
NameNO10G03020
Unique NameNO10G03020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1733
Alignment locationchr10:840543..842275 -

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Properties
Property NameValue
DescriptionRing u-box domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:840543..842275 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
Homology
BLAST of NO10G03020 vs. NCBI_GenBank
Match: EWM25530.1 (ring u-box domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 357.8 bits (917), Expect = 4.300e-95
Identity = 205/411 (49.88%), Postives = 261/411 (63.50%), Query Frame = 0
Query:    1 MTPPNAQGRQPPAGSREAYGGVRLEAMTGGDRIVN---DLAAAAGNAGGGRRRMHGSWAPNPPTGPQTVVQKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYSSSSSICGGG----RFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVEEEWVVGPHRFEAGANQMYSTAALGYQGADLLKA--SLEGEG--GRGVAGGKVKSNEKEDLSVFIVLRPCVEEDDDVGQGKEGKER--GEVFAQVTVMSLTHSVKIVGSVGERKG---KEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAXXXXXXXXXXXXXXXXXXXXXXTAEKEEVEQEINRAECVVCLTNKRELAILPCRHMCVCRACAAECIQSQDSRCPICRNPAHALLKLTLDEDDHYCRSSAS 396
            MTPPNAQ RQPP GS+EAY G+R E   G  R+ +   D AAAA NA  GR      W  NPP  PQTVVQ+TKM++N CH+ KDT+RL       S ++E  +   +  GG    R+HLSFRFD+  PC VAV+WVA E K+ AG LCH  L+  +E W  GP RF+AG NQ YST A GY GADL +A  +L G G  G    GG+  +  KE L+V+IV+RP  ++D+  G GKE ++   G+V AQ+T++ +          GE +G   +E+ W  + +KQKIET +G++VLQ+IYGIAG+ A                         A++EE   E  RA+CVVCLTNKRELAILPCRHMCVCR CAAECIQ+QDS+CPICRNPA ALLKLTL+++DH   SS+S
Sbjct:    8 MTPPNAQDRQPPPGSQEAYSGIRFETRPGIGRLFSGTADAAAAAANAANGR-----VWVVNPPRRPQTVVQRTKMIKNTCHLHKDTLRL-----GVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEAAGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGVNLVPLPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREVDGTGDAPAG------ADREE---ETGRADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKLTLEDNDHRRSSSSS 399          
BLAST of NO10G03020 vs. NCBI_GenBank
Match: GAY03319.1 (RING zinc finger-like protein [Pythium insidiosum])

HSP 1 Score: 108.6 bits (270), Expect = 4.500e-20
Identity = 91/317 (28.71%), Postives = 139/317 (43.85%), Query Frame = 0
Query:   67 VQKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYSSSSSICGGGRFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVEEEWVVGPHRFEAGANQMYSTAALGYQGADLLKASLEGEGGRGVAGGKVKSNEKEDLSVFIVLRP--CVEEDDDVGQGKEGKERGEVFAQVTVMSLTHSVKIVGSVGERKGKEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAXXXXXXXXXXXXXXXXXXXXXXTAEKEEVEQEINRAECVVCLTNKRELAILPCRHMCVCRACAAECIQSQDSRCPICRNPAHALLKL 382
            +Q+T  V+N  +++K T++LVP             S      GR+ L F FDAT PC + V+  A E  D+  G    +L   E E +        G  Q +ST            A ++ +GG  V  G++ ++E    S   +  P   V E  + G+  + +     F + T                  G E  W  +V+KQKI+     + LQ+IYGI G++ +A                      TA+ +EVE   + AEC++C+   R   +LPCRHMC+C  C AE ++   S CPICR    ALL++
Sbjct:   74 MQQTSTVKNHVNLKKSTLKLVP-------------SKDSDRPGRYVLEFMFDATKPCRIKVYVAAIETIDDDTGCSSFSLAHPERELIT--TTCPDGLGQQFST------------AEVQADGGCCVDVGELSASELVYDSTASLRFPLIVVLEVQNTGRNPQSQATFATFVKKT------------------GNE--WGVKVLKQKIQVDGMTYELQEIYGIDGAVTAA--------PKNDGEPDEAGEKKTAKSDEVEIP-DGAECIICMCEPRNTTVLPCRHMCLCGEC-AEALRRSSSTCPICRTRVEALLQI 333          
BLAST of NO10G03020 vs. NCBI_GenBank
Match: NP_190909.1 (RING/U-box superfamily protein [Arabidopsis thaliana] >Q9LFH6.1 RecName: Full=Probable E3 ubiquitin-protein ligase LUL2; AltName: Full=Probable RING-type E3 ubiquitin transferase LUL2; AltName: Full=Protein LOG2-LIKE UBIQUITIN LIGASE 2; AltName: Full=RING finger protein 269 >CAB67648.1 putative protein [Arabidopsis thaliana] >AAM61084.1 putative RING zinc finger protein [Arabidopsis thaliana] >AAO24565.1 At3g53410 [Arabidopsis thaliana] >BAF00081.1 hypothetical protein [Arabidopsis thaliana] >AEE79082.1 RING/U-box superfamily protein [Arabidopsis thaliana])

HSP 1 Score: 107.1 bits (266), Expect = 1.300e-19
Identity = 92/322 (28.57%), Postives = 138/322 (42.86%), Query Frame = 0
Query:   68 QKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYSSSSSICGGGRFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVEEEWVVGPH-RFEAGANQMYSTA-ALGYQGADLLKASLEGEGGRGVAGGKVKSNEKEDLSVFIVLRPCVEEDDDVGQGKEGKERGEVFAQVTVMSLTHSVKIVGSVGERKGKEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAXXXXXXXXXXXXXXXXXXXXXXTAEKEEVEQEINRAECVVCLTNKRELAILPCRHMCVCRACAAECIQSQDSRCPICRNPAHALLKLTLDEDD 388
            Q+   +RN  +++K+T+RL P    P               G+F LSF FDA+VP ++ V + A EGKD     C+  L++ +E+        F  G  Q +  A   G   +D+ +A L            V++NE  D+    V    V EDD    G   ++            +TH V      GE K        RVVKQ +      +VLQ+IYGI                             T +    +      ECV+CL+  R+  +LPCRHMC+C  C A+ ++ Q + CPICR P   LL++T++ +D
Sbjct:   58 QEAVTIRNDINLKKETLRLEPDEQNP---------------GKFLLSFTFDASVPGSITVMFFAKEGKD-----CN--LIATKEDLFPSTQVSFAKGLEQRFKQACGTGIDFSDMSEADL------------VEANE-TDVYHVAVKAEVVSEDDHPESGTPNRQ------------ITHVVLEKDHKGEYK-------ARVVKQILWVNGNRYVLQEIYGIGN---------------------------TVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGC-AKLLRFQTNLCPICRQPVDRLLEITVNNND 297          
BLAST of NO10G03020 vs. NCBI_GenBank
Match: OAP01920.1 (LUL2 [Arabidopsis thaliana])

HSP 1 Score: 107.1 bits (266), Expect = 1.300e-19
Identity = 92/322 (28.57%), Postives = 138/322 (42.86%), Query Frame = 0
Query:   68 QKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYSSSSSICGGGRFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVEEEWVVGPH-RFEAGANQMYSTA-ALGYQGADLLKASLEGEGGRGVAGGKVKSNEKEDLSVFIVLRPCVEEDDDVGQGKEGKERGEVFAQVTVMSLTHSVKIVGSVGERKGKEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAXXXXXXXXXXXXXXXXXXXXXXTAEKEEVEQEINRAECVVCLTNKRELAILPCRHMCVCRACAAECIQSQDSRCPICRNPAHALLKLTLDEDD 388
            Q+   +RN  +++K+T+RL P    P               G+F LSF FDA+VP ++ V + A EGKD     C+  L++ +E+        F  G  Q +  A   G   +D+ +A L            V++NE  D+    V    V EDD    G   ++            +TH V      GE K        RVVKQ +      +VLQ+IYGI                             T +    +      ECV+CL+  R+  +LPCRHMC+C  C A+ ++ Q + CPICR P   LL++T++ +D
Sbjct:   58 QEAVTIRNDINLKKETLRLEPDEQNP---------------GKFLLSFTFDASVPGSITVMFFAKEGKD-----CN--LIATKEDLFPSTQVSFAKGLEQRFKQACGTGIDFSDMSEADL------------VEANE-TDVYHVAVKAEVVSEDDHPESGTPNRQ------------ITHVVLEKDHKGEYK-------ARVVKQILWVNGNRYVLQEIYGIGN---------------------------TVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGC-AKLLRFQTNLCPICRQPVDRLLEITVNNND 297          
BLAST of NO10G03020 vs. NCBI_GenBank
Match: XP_002908831.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY57645.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 105.9 bits (263), Expect = 2.900e-19
Identity = 93/323 (28.79%), Postives = 145/323 (44.89%), Query Frame = 0
Query:   67 VQKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYSSSSSICGGGRFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVEEEWVVGPHRFEAGANQMYSTAALGYQGADLLKASLEGEGGRGVAGGKVKSNEKEDLSVFIVLRPCVEEDDDVGQGKEGKERGEVFAQVTVMSLTHSVKIVGS-----VGERKGKEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAXXXXXXXXXXXXXXXXXXXXXXTAEKEEVEQEINRAECVVCLTNKRELAILPCRHMCVCRACAAECIQSQDSRCPICRNPAHALLKLTLD 385
            +Q+T  V+N  +++K +++L+    +P                ++ L F+ DAT  C ++V+ VATE  D   G     L+  ++  V+  H F +G  Q++           +LK S + E         VK  E+E     + L      D D    K G  +   F  + V+ +    K   S        +KG ED+W  +++KQKI      + LQ+IYGI GS+A+A                       A KEE++     AEC++CL   R   ILPCRHMC+C  C AE ++   S CPICR    ALL++ ++
Sbjct:   66 LQQTCTVKNPVNLKKASLKLLRSPTEPQ---------------QYALEFQLDATKRCLISVYLVATETIDADSGGSSFALVHSDKNPVLSQH-FPSGLGQVF-----------VLKGSEKEE-------NTVKEEEQEKPEQPLPLLDFSSYDPDEFVYKPGTAQ---FPLIIVLEVASDKKRPQSQTTFCTFVKKG-EDSWDVKMLKQKILVDGLTYELQEIYGIDGSVAAA-----PKTERNGASGDGQSDTTQAAKEEIDIP-EGAECIICLCEPRNTTILPCRHMCLCTEC-AEALRRSSSTCPICRTRVEALLQIRIE 343          
BLAST of NO10G03020 vs. NCBI_GenBank
Match: XP_023005869.1 (probable E3 ubiquitin-protein ligase LUL2 [Cucurbita maxima])

HSP 1 Score: 104.4 bits (259), Expect = 8.500e-19
Identity = 88/328 (26.83%), Postives = 142/328 (43.29%), Query Frame = 0
Query:   57 PNPPTGPQTVVQKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYSSSSSICGGGRFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVEEEWVVGPHRFEAGANQMYSTAALGYQGADLLKASLEGEGGRGVAGGKVKSNEKEDLSVFIVLRPCVEEDDDVGQGKEGKERGEVFAQVTVMSLTHSVKIVGSVGERKGKEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAXXXXXXXXXXXXXXXXXXXXXXTAEKEEVEQEINRAECVVCLTNKRELAILPCRHMCVCRACAAECIQSQDSRCPICRNPAHALLKLTLD 385
            P PP  P    QK   +RN  +++K+T+R+ P    P               G+F +SF FDATV  ++ +F+ A EG+D     C+ T +  E+ +     RFE G  Q Y                     G G+   K + +E   ++   V    V+         E    G+     TV+  T + +I  +V E+   E  +  +V+KQ +      + LQ+IYGI  S+                            +++V+      ECV+CL+  R+  +LPCRHMC+C  C A+ ++ Q +RCPICR P   LL++ ++
Sbjct:  112 PMPPQTPYVEHQKAVTIRNDVNLKKETLRVEPDEENP---------------GQFLVSFLFDATVAGSITIFFFAKEGED-----CNLTPVK-EDTFQPVTVRFEQGLGQKYRQPC-----------------GTGIDFSKFEESELVKVNDTDVYPLAVK--------AEASTEGQTGPDGTVVPETMNSQITQAVFEKDKGE--YQVKVLKQILWVNGMRYELQEIYGIGNSV----------------------------EDDVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGC-AKVLRFQTNRCPICRQPVDRLLEIRVN 362          
BLAST of NO10G03020 vs. NCBI_GenBank
Match: XP_022960312.1 (probable E3 ubiquitin-protein ligase LUL2 [Cucurbita moschata])

HSP 1 Score: 104.0 bits (258), Expect = 1.100e-18
Identity = 88/328 (26.83%), Postives = 141/328 (42.99%), Query Frame = 0
Query:   57 PNPPTGPQTVVQKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYSSSSSICGGGRFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVEEEWVVGPHRFEAGANQMYSTAALGYQGADLLKASLEGEGGRGVAGGKVKSNEKEDLSVFIVLRPCVEEDDDVGQGKEGKERGEVFAQVTVMSLTHSVKIVGSVGERKGKEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAXXXXXXXXXXXXXXXXXXXXXXTAEKEEVEQEINRAECVVCLTNKRELAILPCRHMCVCRACAAECIQSQDSRCPICRNPAHALLKLTLD 385
            P PP  P    QK   +RN  +++K+T+R+ P    P               G+F +SF FDATV  ++ +F+ A EG+D     C+ T +  +    V  H FE G  Q Y                     G G+   K + +E   ++   V    V+         E    G+     TV+  T + +I  +V E+   E  +  +V+KQ +      + LQ+IYGI  S+                            +++V+      ECV+CL+  R+  +LPCRHMC+C  C A+ ++ Q +RCPICR P   LL++ ++
Sbjct:  245 PMPPQTPYVEHQKAVTIRNDVNLKKETLRVEPDEENP---------------GQFLVSFLFDATVAGSITIFFFAKEGED-----CNLTPVKEDTFQPVTVH-FEQGLGQKYRQPC-----------------GTGIDFSKFEESELVKVNDTDVYPLAVK--------AEASTEGQTGPDGTVVPETMNSQITQAVFEKDKGE--YQVKVLKQILWVNGMRYELQEIYGIGNSV----------------------------EDDVDGSDPGKECVICLSEPRDTTVLPCRHMCMCSGC-AKVLRFQTNRCPICRQPVDRLLEIRVN 495          
BLAST of NO10G03020 vs. NCBI_GenBank
Match: XP_023539423.1 (probable E3 ubiquitin-protein ligase LUL2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104.0 bits (258), Expect = 1.100e-18
Identity = 88/328 (26.83%), Postives = 141/328 (42.99%), Query Frame = 0
Query:   57 PNPPTGPQTVVQKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYSSSSSICGGGRFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVEEEWVVGPHRFEAGANQMYSTAALGYQGADLLKASLEGEGGRGVAGGKVKSNEKEDLSVFIVLRPCVEEDDDVGQGKEGKERGEVFAQVTVMSLTHSVKIVGSVGERKGKEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAXXXXXXXXXXXXXXXXXXXXXXTAEKEEVEQEINRAECVVCLTNKRELAILPCRHMCVCRACAAECIQSQDSRCPICRNPAHALLKLTLD 385
            P PP  P    QK   +RN  +++K+T+R+ P    P               G+F +SF FDATV  ++ +F+ A EG+D     C+ T +  +    V  H FE G  Q Y                     G G+   K + +E   ++   V    V+         E    G+     TV+  T + +I  +V E+   E  +  +V+KQ +      + LQ+IYGI  S+                            +++V+      ECV+CL+  R+  +LPCRHMC+C  C A+ ++ Q +RCPICR P   LL++ ++
Sbjct:  112 PMPPQTPYVEHQKAVTIRNDVNLKKETLRVEPDEENP---------------GQFLVSFLFDATVAGSITIFFFAKEGED-----CNLTPVKEDTFQPVTVH-FEQGLGQKYRQPC-----------------GTGIDFSKFEESELVKVNDTDVYPLAVK--------AEASTEGQTGPDGTVVPETMNSQITQAVFEKDKGE--YQVKVLKQILWVNGMRYELQEIYGIGNSV----------------------------EDDVDGSDPGKECVICLSEPRDTTVLPCRHMCMCSGC-AKVLRFQTNRCPICRQPVDRLLEIRVN 362          
BLAST of NO10G03020 vs. NCBI_GenBank
Match: POM63839.1 (RING zinc finger-like protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 104.0 bits (258), Expect = 1.100e-18
Identity = 90/324 (27.78%), Postives = 141/324 (43.52%), Query Frame = 0
Query:   67 VQKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYSSSSSICGGGRFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVEEEWVVGPHRFEAGANQMYSTAALGYQGADLLKASLEGEGGRGVAGGKVKSNEKEDLSVFIVLRPCVEEDDDVGQGKEGKERGEVFAQVTVMSLTHSVKIVGSVGE-----RKGKEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAXXXXXXXXXXXXXXXXXXXXXXTAEKEEVEQEI-NRAECVVCLTNKRELAILPCRHMCVCRACAAECIQSQDSRCPICRNPAHALLKLTLD 385
            +Q+T  V+N  +++K +++L     +P                ++ L F FDAT PC ++V+ VA E  D   G     L+  ++  V+  H F +G  Q +           +LK            G K +  +KED        P ++           K     F  + V+ ++   K   S        +KG ED W  +++KQKI      + LQ+IYGI GS+A+A                      TA+  + E EI   AEC++C+   R   +LPCRHMC+C  C AE ++   S CPICR P  ALL++ ++
Sbjct:   66 LQQTCTVKNHVNLKKTSLKLQQSPAEPL---------------QYALEFSFDATKPCRISVYLVAAEIIDAETGSSSFALVHADKIPVLTQH-FSSGLGQHF-----------VLK-----------GGVKEEETDKEDHEKHEQSTPLLDFSPYDADELVYKAGTTQFPLIIVLEVSSDRKRPQSQSTFCTFVKKG-EDLWDIKMLKQKILVDGLTYELQEIYGIDGSVAAA-------PKTERSGAAGDGQPDTAQTAKDEIEIPEGAECIICMCEPRNTTVLPCRHMCLCSEC-AEALRKSSSTCPICRTPVEALLQIRVE 342          
BLAST of NO10G03020 vs. NCBI_GenBank
Match: GAY03315.1 (RING zinc finger-like protein [Pythium insidiosum])

HSP 1 Score: 103.2 bits (256), Expect = 1.900e-18
Identity = 87/317 (27.44%), Postives = 137/317 (43.22%), Query Frame = 0
Query:   67 VQKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYSSSSSICGGGRFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVEEEWVVGPHRFEAGANQMYSTAALGYQGADLLKASLEGEGGRGVAGGKVKSNEKEDLSVFIVLRP--CVEEDDDVGQGKEGKERGEVFAQVTVMSLTHSVKIVGSVGERKGKEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAXXXXXXXXXXXXXXXXXXXXXXTAEKEEVEQEINRAECVVCLTNKRELAILPCRHMCVCRACAAECIQSQDSRCPICRNPAHALLKL 382
            +Q+T  V+N  +++K T++LVP        ++     S C          FDAT PC + V+  A E  D+  G    +L   E E +        G  Q +ST            A ++ +GG  V  G++ ++E    S   +  P   V E  + G+  + +     F + T                    E+ W  +V+KQKI+     + LQ+IYGI G++ +A                      TA+ +EVE   + AEC++C+   R   +LPCRHMC+C  C AE ++   S CPICR    ALL++
Sbjct:   74 MQQTSTVKNHVNLKKSTLKLVP-------SKDSDRPGSSC----------FDATKPCRIKVYVAAIETIDDDTGCSSFSLAHPERELIT--TTCPDGLGQQFST------------AEVQADGGCCVDVGELSASELVYDSTASLRFPLIVVLEVQNTGRNPQSQATFATFVKKT--------------------ENEWGVKVLKQKIQVDGMTYELQEIYGIDGAVTAA--------PKNDGEPDEAGEKKTAKSDEVEIP-DGAECIICMCEPRNTTVLPCRHMCLCGEC-AEALRRSSSTCPICRTRVEALLQI 329          
The following BLAST results are available for this feature:
BLAST of NO10G03020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25530.14.300e-9549.88ring u-box domain-containing protein [Nannochlorop... [more]
GAY03319.14.500e-2028.71RING zinc finger-like protein [Pythium insidiosum][more]
NP_190909.11.300e-1928.57RING/U-box superfamily protein [Arabidopsis thalia... [more]
OAP01920.11.300e-1928.57LUL2 [Arabidopsis thaliana][more]
XP_002908831.12.900e-1928.79conserved hypothetical protein [Phytophthora infes... [more]
XP_023005869.18.500e-1926.83probable E3 ubiquitin-protein ligase LUL2 [Cucurbi... [more]
XP_022960312.11.100e-1826.83probable E3 ubiquitin-protein ligase LUL2 [Cucurbi... [more]
XP_023539423.11.100e-1826.83probable E3 ubiquitin-protein ligase LUL2 [Cucurbi... [more]
POM63839.11.100e-1827.78RING zinc finger-like protein [Phytophthora palmiv... [more]
GAY03315.11.900e-1827.44RING zinc finger-like protein [Pythium insidiosum][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001176NSK001176Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03020.1NO10G03020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|417996gene_3902Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100032g18gene4986Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03020.1NO10G03020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03020 ID=NO10G03020|Name=NO10G03020|organism=Nannochloropsis oceanica|type=gene|length=1733bp
ATGACCCCGCCCAACGCCCAAGgtatgtcgttgccatagtgatggttttc
ggcgccgaagcccaactcctctgttctccaccccctctccagGTCGGCAG
CCTCCCGCAGGGTCCCGGGAGGCCTACGGCGGCGTCCGCCTCGAGGCCAT
GACTGGCGGTGATCGTATCGTCAACGACCTTGCTGCCGCTGCAGGAAATG
CCGGTGGTGGTAGAAGACGGATGCATGGATCATGGgtacgtgttgcgtga
aaactttctcgtcatacgcagaaccctaagaagccttacccctcctcctc
cccgctctctctccttctctcacacctcccatacgcagGCCCCAAATCCC
CCAACAGGACCGCAAACAGTCGTTCAAAAAACAAAGATGGTGCGCAACGC
CTGCCACGTACGCAAGGACACTGTGCGACTTGTCCCTCCTAACTTCCAAC
CATCAGGGCAAGAGGAATACAGCAGCAGCAGCAGCATTTGTGGTGGAGGA
AGGTTCCACCTCTCCTTCCGGTTTGATGCTACTGTGCCGTGCAATGTGGC
AGTGTTTTGGGTAGCAACTGAGGGGAAGGACGAGGCAGGTGGACTCTGgt
aagtcttcatgacaacaagggagaagcaacacgaaattcaaatttattca
tctcgtcctatctccctgcctcttcctgcctccctctcacccttcccagT
CATAAAACCCTCATGTCCGTGGAAGAAGAGTGGGTGGTGGGCCCGCACCG
TTTTGAGGCTGGAGCAAACCAAATGTACTCGACGGCGGCCTTGGGGTACC
AGGGTGCTGACTTACTGAAAGCCAGTCTAGAAGGAGAAGGAGGAAGAGGA
GTCGCGGGAGGGAAGGTCAAGAGTAATGAGAAAGAGGATTTAAGTGTGTT
CATTGTGTTGAGGCCTTGTGTTGAGGAGGATGATGATGTAGGTCAGGGGA
AGGAGGGAAAAGAAAGAGGGGAAGTGTTCGCCCAAGTGACGGTAATGAGT
TTAACACATAGTGTAAAAATTGTTGGAAGTGTTGGAGAAAGAAAAGGAAA
GGAGGATGCATGGGTAGGGCGGGTGGTGAAGCAGAAAATTGAGgtatgac
ggtgggaagtaagggtcagtaaacttaatggaagtgccaaattctgtttt
tccctgacctggacctggggctcataattctcctttcctcctttctcttt
ctccttccgccttacctttcttccatccttccctcattcttcagACGCCC
GATGGCGTGTTTGTGTTGCAGGATATATACGGTATTGCGGGATCGATGGC
CAGCGCAGGTGGGGGAGGCAACAGCGAAAGCGGTTGGAAGGAGGGTGACG
ATGGCGGTGCTAGTAAAAGTGCGACTGCTGAGAAAGAGGAGGTGGAGCAA
GAAATAAACCGCGCAGAATGCGTGGTATGTCTGACGAATAAACGGGAGTT
GGCCATATTGCCCTGCAGGCATATGTGTGTGTGTCGGGCGTGTGCGGCAG
AGTGCATCCAGAGCCAGGATAGCCGGTGTCCGATCTGCAGGAATCgtgag
ttgagggagggaaggggggaggggggtaagggatggatttgggggggtga
ggcatgcacatggaagccgggaccttatctcacactcgaatacacactca
cagCGGCCCATGCGTTGCTGAAATTGACCCTTGACGAGGACGACCATTAT
TGCCGCTCCTCTGCCTCACCACACCAGGCCTAG
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protein sequence of NO10G03020.1

>NO10G03020.1-protein ID=NO10G03020.1-protein|Name=NO10G03020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=400bp
MTPPNAQGRQPPAGSREAYGGVRLEAMTGGDRIVNDLAAAAGNAGGGRRR
MHGSWAPNPPTGPQTVVQKTKMVRNACHVRKDTVRLVPPNFQPSGQEEYS
SSSSICGGGRFHLSFRFDATVPCNVAVFWVATEGKDEAGGLCHKTLMSVE
EEWVVGPHRFEAGANQMYSTAALGYQGADLLKASLEGEGGRGVAGGKVKS
NEKEDLSVFIVLRPCVEEDDDVGQGKEGKERGEVFAQVTVMSLTHSVKIV
GSVGERKGKEDAWVGRVVKQKIETPDGVFVLQDIYGIAGSMASAGGGGNS
ESGWKEGDDGGASKSATAEKEEVEQEINRAECVVCLTNKRELAILPCRHM
CVCRACAAECIQSQDSRCPICRNPAHALLKLTLDEDDHYCRSSASPHQA*
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Synonyms
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