NO10G02840, NO10G02840 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G02840
Unique Name	NO10G02840
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3325
Alignment location	chr10:779102..782426 -

Link to JBrowse

Properties


Property Name	Value
Description	Ubiquitin-protein cullin 4

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:779102..782426 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0031625	ubiquitin protein ligase binding
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0019538	protein metabolic process
GO:0009987	cellular process
GO:0009056	catabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036317	Cullin_homology_sf
IPR016159	Cullin_repeat-like_dom
IPR036390	WH_DNA-bd_sf
IPR001373	Cullin_N
IPR019559	Cullin_neddylation_domain
IPR016158	Cullin_homology

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Homology

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BLAST of NO10G02840 vs. NCBI_GenBank
Match: EWM25493.1 (ubiquitin-protein cullin 4 [Nannochloropsis gaditana])

HSP 1 Score: 1119.8 bits (2895), Expect = 0.000e+0
Identity = 568/764 (74.35%), Postives = 641/764 (83.90%), Query Frame = 0

Query:   52 RPFKVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMCVHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDVWQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGR-----AXXXXXXXXXXXXXXXXXXXXXXLEIKIIKGLLVLIERQRNGESVNQALLRSLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVERRLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQRVEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDLLEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFIDVKLKGEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLGKSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQY--CEASGE------RGREGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYTGKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERGVSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFSLNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIYNY 803
            RPFKVQPKLPENFE+ TWE LR+AVVAVQSK A+AIS+EELYRAVE++CVHKMG RLYD L+ EC RHVA  VG LA+  GG+ G +D ALFL +VDDVWQDHCEHMLTIR+IFLY+DRS+VMQ   LQPIW+MGLTLFRL+LAAQGR                            L+IKI+KG+L ++ERQRNGE+VN ALLRSLV+MLGSLGLYKPLFL+AFLEDTERYFA EG KKMESLDVVAFL+HVERRL EA E+ V YLE GT+KAL++A+E+RLLAPHVT LI+KG   LMDAQRVED+RR+Y L CRK GG  E+K+AFNAYIRRRG ELV D+AREKEM+EDLL FK KCD++L  ALGG++N  C+ A+KDGFEFA+NVRP+RPAELLAKF+D KLKGEKGVSE E+EGLLD+ MVLFR+VGSKDVFEAFYKKDLAKRLLLG+SASADLE+SM+AKLKAECGATFTNK EGMFKDMDLSRELMGNY Q+    A+GE                   HVLTTGYWPA+P S+VVVP VLEP+M RFS YYTGKYQGRRL+WQH+LGTCV+KARF  GTKELSVSFFQ +VLLCFNDG    V+F +IKAATR+EDGELRRTLQSLACGK+NQRVL KEPKGK+VED+D FSLN  F HKLYRIKINTIQLKETVEEN+KTHA+VHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKF   PVD+K+RVESLIERDYLCRDD NPS+YNY
Sbjct:   45 RPFKVQPKLPENFEDATWEVLRQAVVAVQSKTAVAISYEELYRAVENLCVHKMGARLYDRLRMECARHVAAVVGTLAS--GGVEGFMDPALFLAKVDDVWQDHCEHMLTIRNIFLYMDRSFVMQTSALQPIWDMGLTLFRLELAAQGRGLQRPGAAGGVQAAAAGAGEGGVAGNTGLDIKIVKGMLRVMERQRNGEAVNLALLRSLVRMLGSLGLYKPLFLRAFLEDTERYFAVEGTKKMESLDVVAFLLHVERRLGEAEESVVHYLEPGTRKALITAVESRLLAPHVTALIDKGLTPLMDAQRVEDVRRLYQLACRKPGGAEELKAAFNAYIRRRGGELVGDDAREKEMIEDLLAFKDKCDVILSEALGGRSNPACLAAMKDGFEFALNVRPSRPAELLAKFLDAKLKGEKGVSEGEMEGLLDRIMVLFRYVGSKDVFEAFYKKDLAKRLLLGRSASADLERSMVAKLKAECGATFTNKFEGMFKDMDLSRELMGNYAQFLGTTAAGEXXXXXXXXXXXXXXXXXXXHVLTTGYWPAYPSSDVVVPPVLEPHMARFSAYYTGKYQGRRLVWQHSLGTCVIKARFPLGTKELSVSFFQAIVLLCFNDGESPRVAFTDIKAATRIEDGELRRTLQSLACGKINQRVLQKEPKGKDVEDNDVFSLNAGFTHKLYRIKINTIQLKETVEENDKTHAEVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFSVVPVDVKRRVESLIERDYLCRDDINPSVYNY 806

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BLAST of NO10G02840 vs. NCBI_GenBank
Match: CBJ49182.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 761.1 bits (1964), Expect = 3.400e-216
Identity = 408/757 (53.90%), Postives = 523/757 (69.09%), Query Frame = 0

Query:   52 RPFKVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMCVHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDVWQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGRAXXXXXXXXXXXXXXXXXXXXXXLEIKIIKGLLVLIERQRNGESVNQALLRSLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVERRLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQRVEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDLLEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFIDVKLKGEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLGKSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQYCEASGERGR----EGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYTGKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERGVSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFSLNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIYNYVA 805
            +PFKVQPKLPE FE++TWE L+RAVVA+Q+K+ +  S EELYRAVED+CVHKMG  LYD L++EC  H    + +L      +G   D   FL+ VD  WQDHC  MLT+R++FLYLDRS+V+Q   L+ IW+MGL  FR    A                          +E K + G+L LIER+R G  VN+ LLRSL++ML +L +Y+ LF   FL +TE ++AAEGV+ M + DV  FL HVE RL +  +    YL+  T+K LV+  E++LL PH   L+E+GFGSLMD+QR+ +L+ MY L  ++V    E+K+A  AY++ +G  +V D+  +K+M+ +LL F+ K D  + +A  G  N      LK+ +E  +N R  RPAEL+AKF+DVKLKGEKG S+ EVE +L++ MVLFR++  KDVFEAFYKKDLAKRLLLGKS+S DLE+SMI+KLK ECG+ FT+KLEGMFKD+DLSR+LM  Y+ + +           +  RE++  V VLTTGYWP +P  EV +P  ++ ++  F  YY  KYQGRRL+WQ  LG CV+K  F  G KEL+VS  Q LVL CF+   E  VSFAE+KA T +EDGELRRTLQSLACGKV  RVLHKEP+G+EV D D F  N  F  KL+RI+IN+IQLKET EENEKTH  V RDRQYQ+DAAIVRIMKARK L+H +L+SELF Q+KFPATPVD+KKR+ESLIERDYL RD   P  Y Y+A
Sbjct:   30 KPFKVQPKLPEQFEDSTWEMLQRAVVAIQTKQPIDTSREELYRAVEDLCVHKMGANLYDRLRDECGSHTRREMESL------VGQTPDCNAFLQLVDRNWQDHCSSMLTLRNVFLYLDRSFVLQAPNLRSIWDMGLEHFRNHFQA-----------------------LEEVEAKTVAGILTLIERERTGVDVNRPLLRSLLRMLSALQVYEELFEGRFLRETEEFYAAEGVRYMATADVPHFLQHVEERLQQEADRASLYLDSSTRKLLVTTAESQLLKPHTQALLERGFGSLMDSQRLPELKVMYQL-FQRVQALDELKAAMTAYVQSKGLYIVHDKDNDKQMISNLLAFRAKLDECINTACDG--NESYRYKLKEAWEAFLNARHNRPAELMAKFLDVKLKGEKGTSDDEVEAVLERVMVLFRYLQGKDVFEAFYKKDLAKRLLLGKSSSFDLERSMISKLKTECGSAFTSKLEGMFKDIDLSRDLMTTYSHHLKTKLHDRTVFKLDKSREMDLHVQVLTTGYWPGYPAMEVGMPDEMKEHVECFRCYYQNKYQGRRLVWQPVLGQCVLKVAFPKGRKELAVSQLQTLVLWCFSTDDE--VSFAEVKAKTAIEDGELRRTLQSLACGKV--RVLHKEPRGREVNDGDNFLFNKDFTAKLHRIRINSIQLKETSEENEKTHEAVFRDRQYQVDAAIVRIMKARKNLAHTMLMSELFSQVKFPATPVDLKKRIESLIERDYLERDPNKPGDYRYLA 750

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BLAST of NO10G02840 vs. NCBI_GenBank
Match: XP_024371001.1 (cullin-4-like [Physcomitrella patens] >PNR57707.1 hypothetical protein PHYPA_004701 [Physcomitrella patens])

HSP 1 Score: 737.3 bits (1902), Expect = 5.200e-209
Identity = 402/754 (53.32%), Postives = 506/754 (67.11%), Query Frame = 0

Query:   52 RPFKVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMCVHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDVWQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGRAXXXXXXXXXXXXXXXXXXXXXXLEIKIIKGLLVLIERQRNGESVNQALLRSLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVERRLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQRVEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDLLEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFIDVKLK-GEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLGKSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQYCEASGERGREGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYTGKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERGVSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFSLNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIYNYVA 805
            +PFK +PKLP NFEE TW  ++ AV A+  K+ +  S EELYRAVED+CVHKM G LY  L+ EC  H++  +  LA      G   D  +FL  V+  WQDHC  ML IRSI LYLDR+YV+Q  G++ +W+MGL LFR  L+A                          ++ K + GLL LIE +R GESV+++LL+ L++M  +LG+Y   F + FL+ T  ++AAEG + M+  DV  +L HVE RL E  E C+ YL+G T+K LV+  E +LL+ H   ++EKGFG LMDA RV DL+RMY+L  R V     +K A + YI+  G   V DE ++K+MV  LL+ K + D +   +     N    N LKD FE  +N+R  RPAEL+AKFID KL+ G KG SE E+EG+LDK +VLFRF+  KDVFEAFYKKDLAKRLLLGKSAS D EKSMI+KLK ECG+ FTNKLEGMFKD++LSRE+  ++ Q    S +   +    +E +VHVLTTGYWP +P  EV +P  L  Y   F E+Y  K+ GRRLMWQ++LG CV+KA F  G KELSVS FQ +VL+ FND + +  SF EIK  T +ED ELRRTLQSLACGKV  RVL+K+PKG+EVED D F  N  F   L+RIK+N IQLKETVEEN  T   V +DRQYQIDAAIVRIMK RK LSH LL++ELF QLKFP  P D+KKR+ESLI+R+YL RD  NP IYNY+A
Sbjct:  113 KPFKDKPKLPANFEEVTWVKIKEAVTAIHLKQPVNCSLEELYRAVEDLCVHKMAGNLYKRLQLECESHISIKLRDLA------GRSPDAVVFLSHVERCWQDHCNQMLVIRSIALYLDRTYVIQNSGVRSLWDMGLLLFRRHLSA-----------------------CPEVQSKTVSGLLRLIEEERMGESVDRSLLKHLLRMFSALGIYAESFERQFLDCTSDFYAAEGTRFMQQTDVPDYLKHVETRLHEENERCLLYLDGSTRKPLVATAEKQLLSRHTAAILEKGFGMLMDANRVADLQRMYMLFTR-VNALESLKMALSTYIKTTGNSTVMDEEKDKDMVSWLLDLKARLDAIWDESF--SRNETFANTLKDAFEHLINLRQNRPAELIAKFIDGKLRAGNKGTSEEELEGILDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSREINESFRQ----SAQARMKLPSGIEMNVHVLTTGYWPTYPPMEVRLPHELNVYQDIFKEFYLSKHSGRRLMWQNSLGHCVLKANFPKGKKELSVSLFQTVVLMLFNDAQSQ--SFQEIKDTTAIEDKELRRTLQSLACGKV--RVLNKQPKGREVEDDDIFVFNEDFVAPLFRIKVNAIQLKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKANPQIYNYLA 826

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BLAST of NO10G02840 vs. NCBI_GenBank
Match: XP_017235141.1 (PREDICTED: cullin-4 [Daucus carota subsp. sativus])

HSP 1 Score: 733.8 bits (1893), Expect = 5.800e-208
Identity = 393/751 (52.33%), Postives = 509/751 (67.78%), Query Frame = 0

Query:   55 KVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMCVHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDVWQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGRAXXXXXXXXXXXXXXXXXXXXXXLEIKIIKGLLVLIERQRNGESVNQALLRSLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVERRLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQRVEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDLLEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFIDVKLK-GEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLGKSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQYCEASGERGREGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYTGKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERGVSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFSLNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIYNYVA 805
            K +P +P NFEETTWETL+ A+ A+  K+      E+LY+AV D+C+HKMGG +Y  +++EC  H++ A+ +L      +G   D  +FL  V+  WQD C+ ML IR I LYLDR+YV Q   ++ +W+MGL LFR  LA                           +E K + GLL +IE +R GE+V++ LL  L+KM  +LG+Y   F K FLE T  ++AAEG K M+  DV  +L HVE RL E  + CV YL+ GT+K LV+  E +LL  H++ +++KGF  LMD  R+EDL+RMY+L CR V     ++ A N+YIR+ G  +V DE ++K+MV  LLEFK   D +L  +     N    N +KD FE  +N+R  RPAEL+AKF+D KL+ G KG SE E+EG+LDK +VLFRF+  KDVFEAFYKKDLAKRLLLGKSAS D EKSMI+KLK ECG+ FTNKLEGMFKD++LS+E+  ++ Q    S +   +    +E SVHVLTTGYWP +P  +V +P  L  Y   F E+Y  KY GRRLMWQ++LG CV+KA F  G KEL+VS FQ +VL+ FND  +  +SF +IK AT +ED ELRRTLQSLACGKV  RVL K PKG+EV+D+D+FS N +F   LYRIK+N IQ+KETVEEN  T   V +DRQYQ+DAAIVRIMK RK LSH LL++ELF QLKFP  P D+KKR+ESLI+R+YL RD +NP IYNY+A
Sbjct:  110 KAKPTIPTNFEETTWETLKSAITAIFLKQPDPCDLEKLYQAVNDLCLHKMGGSVYQRIEKECETHISAALQSL------VGQSEDLVVFLSLVEKCWQDFCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKHLALASE-----------------------VEHKTVFGLLKMIESERRGEAVDRTLLNHLLKMFTALGIYSESFEKPFLEGTSEFYAAEGAKYMQQADVPDYLKHVEIRLHEEHDRCVLYLDIGTRKPLVATAERQLLERHISAILDKGFTMLMDGSRIEDLQRMYVLFCR-VDALESLRHALNSYIRKTGQGIVMDEEKDKDMVSCLLEFKASLDTILEDSF--SKNEAFCNTVKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGMLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ----SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGRKELAVSLFQTVVLMLFNDAEK--LSFQDIKDATSIEDKELRRTLQSLACGKV--RVLQKLPKGREVDDNDSFSFNDQFAAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPSDLKKRIESLIDREYLERDKSNPQIYNYLA 820

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BLAST of NO10G02840 vs. NCBI_GenBank
Match: XP_024373193.1 (cullin-4-like [Physcomitrella patens] >XP_024373195.1 cullin-4-like [Physcomitrella patens] >PNR55033.1 hypothetical protein PHYPA_005926 [Physcomitrella patens])

HSP 1 Score: 731.9 bits (1888), Expect = 2.200e-207
Identity = 396/754 (52.52%), Postives = 509/754 (67.51%), Query Frame = 0

Query:   52 RPFKVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMCVHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDVWQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGRAXXXXXXXXXXXXXXXXXXXXXXLEIKIIKGLLVLIERQRNGESVNQALLRSLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVERRLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQRVEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDLLEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFIDVKLK-GEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLGKSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQYCEASGERGREGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYTGKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERGVSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFSLNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIYNYVA 805
            +PFK +PKLP++FEE TW  ++ AV A+  K+ +  S EELYRAVED+C+HKM G LY  L++EC  H++  +  L      +G   D  +FL  V+  WQDHC  ML IRSI LYLDR+YV+Q  G++ +W+MGL LFR  L+A                          +E K + GLL LIE++R GE+V+ +LL+ L++M  +LG+Y   F + FLE T  ++AAEG + M+  DV  +L HVE R+ E  E C+ YL+G T+K+LV+  E +LL+ H T ++EKGF  LMDA RV DL+RMY+L  R V     +K   + YI+  G   V DE ++K+MV  LL+ K + D +   +     N    N LKD FE  +N+R  RPAEL+AKFID KL+ G KG+SE E+EG+LDK +VLFRF+  KDVFEAFYKKDLAKRLLLGKSAS D EKSMI+KLK ECG+ FTNKLEGMFKD++LSRE+  ++ Q    S +   +    +E +VHVLTTGYWP +P  EV +P  L  Y   F E+Y  K+ GRRLMWQ++LG CV+K+ F  G KELSVS FQ +VL+ FND   + ++F EIK  T +ED ELRRTLQSLACGKV  RVL+K PKG+EVE+ D F  N  F   L+RIK+N IQLKETVEEN  T   V +DRQYQIDAAIVRIMK RK LSH LL++ELF QLKFP  PVD+KKR+ESLI+R+YL RD  NP IYNY+A
Sbjct:   89 KPFKDKPKLPKDFEEVTWVKIKEAVTAIHLKQPVNCSLEELYRAVEDLCLHKMAGNLYRRLQQECESHISVKLRDL------VGRSPDAVVFLSHVESCWQDHCNQMLVIRSIALYLDRTYVIQNSGVRSLWDMGLQLFRRHLSA-----------------------CPEVESKTVSGLLKLIEKERMGENVDWSLLKHLLRMFNALGIYSETFERPFLECTADFYAAEGTRFMQQTDVPDYLKHVETRIHEEYERCLLYLDGSTRKSLVATAEKQLLSRHTTAILEKGFSMLMDANRVVDLQRMYVLFAR-VNALESLKMTLSTYIKATGNSTVMDEEKDKDMVSWLLDLKARLDAIWDESF--SRNETFANTLKDAFEHLINLRQNRPAELIAKFIDGKLRAGNKGISEEELEGILDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSREINESFRQ----SAQARLKLPSGIEMNVHVLTTGYWPTYPPMEVRLPHELNVYQEIFKEFYLSKHSGRRLMWQNSLGHCVLKSDFPKGKKELSVSLFQTVVLMLFNDA--QSLTFQEIKETTAIEDKELRRTLQSLACGKV--RVLNKIPKGREVENEDTFVFNEDFVASLFRIKVNAIQLKETVEENTTTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPVDLKKRIESLIDREYLERDKANPQIYNYLA 802

[Close]

BLAST of NO10G02840 vs. NCBI_GenBank
Match: GAQ79363.1 (cullin 4 [Klebsormidium nitens])

HSP 1 Score: 731.1 bits (1886), Expect = 3.700e-207
Identity = 393/754 (52.12%), Postives = 511/754 (67.77%), Query Frame = 0

Query:   52 RPFKVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMCVHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDVWQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGRAXXXXXXXXXXXXXXXXXXXXXXLEIKIIKGLLVLIERQRNGESVNQALLRSLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVERRLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQRVEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDLLEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFIDVKLK-GEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLGKSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQYCEASGERGREGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYTGKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERGVSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFSLNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIYNYVA 805
            +PFK +PKLP +FEE TW  L+ AV AV  K  +  S EELYRA E+MCVHKM  +LY  +++EC  H+A  + +L      +G  +D  +FL  VD  WQDHCE ML IRSI LYLDR+YV+Q   ++ +W+MGL LFR  LAA                          +E K +KGLL LIER+R GE+V++ALL++L +M  +L +Y   F K FLE+T  ++ AEG + M+  DV  +L HVE RL E  E C+ YL+  T+K L++A+EA+LL+ HV  ++EKGF  LMD  RV DL+RMY L  R VG    ++ AF +Y++  G  LVSDE ++KEMV +LL+ K K D +L+ +  G    G  N+LK+ FE  +NVR  RPAEL+AK+ID  L+ G KG S+ E+E  LDK +VLFRF+  KDVFEAFYKKDLAKRLL+GKSAS D EKSMI+KLK ECG+ FTNKLEGMFKD+DLS++++ ++ +   A  +        +ETSVHVLT GYWP++   ++ +P  L  Y   F E+Y  K+ GRRLMWQ++LG+CV+KA F  G KELSVS FQ +VL+ FND     +S AE++ AT + D ELR TLQSLACGK+  RVL K PKGK+V D D F  N  F+ +L+RIK+N IQLKET EEN  T   V +DRQYQ+DAAIVRIMK RK LSH LL++ELF QLKFP  P D+KKR+ESLI+R+YL RD  NP +YNY+A
Sbjct:   92 KPFKEKPKLPVDFEEKTWSKLKEAVKAVHEKRRIEYSLEELYRAAENMCVHKMASKLYARIQQECEAHIAAKLLSL------VGQTLDPVVFLGHVDATWQDHCEQMLMIRSIALYLDRTYVIQTTNVRSLWDMGLQLFRKHLAA-----------------------VPEVEGKTVKGLLTLIERERMGETVDRALLKNLSRMFTALNIYTESFEKPFLEETAAFYLAEGTRYMQQTDVPDYLKHVEARLHEENERCLQYLDAATRKPLITAVEAQLLSQHVKPILEKGFNVLMDGNRVADLQRMYGLFSR-VGALDVLRPAFTSYVKVTGQALVSDEEKDKEMVSNLLDLKAKLDNILVQSFAGNEAFG--NSLKEAFEHLINVRQNRPAELIAKYIDALLRAGNKGASDEELEATLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLIGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIDLSKDIIESFRESTLARTKL----PSGIETSVHVLTMGYWPSYTPVDMKLPNELNVYQDVFREFYLSKHSGRRLMWQNSLGSCVLKADFPKGRKELSVSLFQTVVLMLFNDTDR--LSLAEVRDATGIPDKELRTTLQSLACGKI--RVLLKTPKGKDVNDGDVFEFNGDFQERLFRIKVNAIQLKETPEENTNTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQVYNYLA 805

[Close]

BLAST of NO10G02840 vs. NCBI_GenBank
Match: XP_024391521.1 (cullin-4-like [Physcomitrella patens] >PNR43901.1 hypothetical protein PHYPA_016284 [Physcomitrella patens])

HSP 1 Score: 729.9 bits (1883), Expect = 8.300e-207
Identity = 395/754 (52.39%), Postives = 509/754 (67.51%), Query Frame = 0

Query:   52 RPFKVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMCVHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDVWQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGRAXXXXXXXXXXXXXXXXXXXXXXLEIKIIKGLLVLIERQRNGESVNQALLRSLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVERRLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQRVEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDLLEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFIDVKLK-GEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLGKSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQYCEASGERGREGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYTGKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERGVSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFSLNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIYNYVA 805
            +PFK +PKLP++FEE TW  LR AV A+  K+ +  S EELYRAVED+C+HKM G LY  L++EC  H++  +  L      +G   D  +FL  V+  WQDHC+ ML IRSI LYLDR+YV+   G++ +W+MGL LFR  L+A                          +E K + GLL LIE++R GE+V+++LL+ L++M  +L +Y   F + FL+ T  ++AAEG++ M+  DV  +L HVE RL E  E C+ YL+G T+K+LV+  E +LL+ H T ++EKGF  LMDA R+ DL+RMY+L  R V     +K A + YI+  G   V DE ++K+MV  LL+ K + D +   +     N    N LKD FE  +N+R  RPAEL+AKFID KL+ G KG SE E+EG+LDK +VLFRF+  KDVFEAFYKKDLAKRLLLGKSAS D EKSMI+KLK ECG+ FTNKLEGMFKD++LSRE+  ++ Q    S +   +    +E +VHVLTTGYWP +P  EV +P  L  Y   F E+Y  K+ GRRLMWQ++LG CV+KA F  G KELSVS FQ LVL+ FND   + ++F +IK  + +ED ELRRTLQSLACGK+  RVL+K PKG+EVED D F  N  F   L+RIK+N IQLKETVEEN  T   V +DRQYQIDAAIVRIMK RK LSH LL++ELF QLKFP  P D+KKR+ESLI+R+YL RD  NP IYNY+A
Sbjct:  107 KPFKEKPKLPKDFEEVTWAKLREAVTAIHLKQPVNCSLEELYRAVEDLCLHKMAGNLYRRLQQECESHISVKLRDL------VGRSPDSVVFLSHVESCWQDHCDQMLLIRSIALYLDRTYVIPNSGVRSLWDMGLQLFRRHLSA-----------------------CPEVESKTVSGLLTLIEKERMGETVDRSLLKHLLRMFSALCIYSESFERRFLDCTADFYAAEGIRFMQQTDVPDYLKHVENRLHEENERCLLYLDGSTRKSLVATAEKQLLSRHTTAILEKGFSMLMDANRLADLQRMYMLFAR-VNTLESLKMALSTYIKATGNSTVMDEEKDKDMVSWLLDLKARLDAIWEESF--FRNETFSNTLKDAFEHLINLRQNRPAELIAKFIDGKLRSGNKGTSEEELEGILDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSREINESFRQ----SAQARLKLPSGIEMNVHVLTTGYWPTYPPMEVRLPRELNVYQDIFKEFYLSKHSGRRLMWQNSLGHCVLKANFPKGKKELSVSLFQTLVLMLFNDA--QSLTFHDIKDTSAIEDKELRRTLQSLACGKI--RVLNKIPKGREVEDEDTFVFNEDFVAPLFRIKVNAIQLKETVEENTTTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKANPQIYNYLA 820

[Close]

BLAST of NO10G02840 vs. NCBI_GenBank
Match: EFJ14633.1 (ubiquitin-protein ligase, cullin 4 [Selaginella moellendorffii])

HSP 1 Score: 729.6 bits (1882), Expect = 1.100e-206
Identity = 385/754 (51.06%), Postives = 509/754 (67.51%), Query Frame = 0

Query:   52 RPFKVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMCVHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDVWQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGRAXXXXXXXXXXXXXXXXXXXXXXLEIKIIKGLLVLIERQRNGESVNQALLRSLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVERRLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQRVEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDLLEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFIDVKLK-GEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLGKSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQYCEASGERGREGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYTGKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERGVSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFSLNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIYNYVA 805
            +PFK +PKLP NFE+ TW+ +R AV A+  K+ ++ S E+LY+ VED+C+HK+ G LY  L++EC  H++  + AL      +G   D  +FL  V+  WQDHC+ ML IRSI LYLDR+YV+Q   ++ +W+MGL LFR  L +                          +E K + G+L LIE++R GE+V++ LL+ L++M  +LG Y   F K F++ T  ++AAEG + M+  DV  +L HVE RL E  E C+ YL+  T+K L+S  E +LL  H  T+++KGFG LMDA RV DL RMYLL  R VG    +K A +AYI+  G  ++ DE ++K+MV  LL+FK + D++   +     N    N +K+ FE  +N+R  RPAEL+AKFID KL+ G KG SE E+E +LDK +VLFR++  KDVFEAFYKKDLAKRLLLGKSAS D EKSMI+KLK ECG+ FTNKLEGMFKD++LSRE+  ++ Q    S +   +    +E +VHVLTTGYWP +P  ++ +P  L  Y   F ++Y  K+ GRRLMWQ++LG CV+KA F  G +ELSVS FQ +VL+ FND     +SF +IK +T +ED ELRRTLQSLACGKV  R+L K+PKG+EVED D F+ N  F   L+RIK+N IQLKETVEEN  T   V +DRQYQIDAAIVRIMK RK LSH LL++ELF QLKFP  P D+KKR+ESLI+R+YL RD  NP +YNY+A
Sbjct:   53 KPFKDKPKLPANFEDATWDKIRAAVSAIHVKQPVSCSLEQLYQNVEDLCLHKLSGNLYQRLQQECETHISAKLNAL------VGQSPDPVVFLSHVERCWQDHCDQMLMIRSIALYLDRTYVIQNSSVRSLWDMGLQLFRKHLTS-----------------------CPEVEHKTVTGILRLIEKERTGETVDRTLLKHLLRMFSALGTYSESFEKPFIDCTAEFYAAEGTRYMQQTDVPDYLRHVEARLHEENERCLLYLDANTRKHLISTSEKQLLERHSPTILDKGFGMLMDANRVADLHRMYLLLAR-VGALESLKQALSAYIKATGHSIIVDEEKDKDMVSTLLDFKARLDMIWEESF--SKNEPFANTIKEAFEHLINLRQNRPAELIAKFIDGKLRAGNKGTSEEELESMLDKVLVLFRYIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSREINESFKQ----SSQARTKLPAGIEMNVHVLTTGYWPTYPPMDIRLPHELNVYQDIFKQFYLSKHSGRRLMWQNSLGHCVLKAEFPKGKRELSVSLFQTVVLMLFNDSLR--LSFQDIKDSTGIEDKELRRTLQSLACGKV--RILQKQPKGREVEDDDVFTFNEDFTAPLFRIKVNAIQLKETVEENASTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQVYNYLA 766

[Close]

BLAST of NO10G02840 vs. NCBI_GenBank
Match: XP_002984123.2 (cullin-4 [Selaginella moellendorffii])

HSP 1 Score: 729.6 bits (1882), Expect = 1.100e-206
Identity = 385/754 (51.06%), Postives = 509/754 (67.51%), Query Frame = 0

Query:   52 RPFKVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMCVHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDVWQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGRAXXXXXXXXXXXXXXXXXXXXXXLEIKIIKGLLVLIERQRNGESVNQALLRSLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVERRLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQRVEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDLLEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFIDVKLK-GEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLGKSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQYCEASGERGREGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYTGKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERGVSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFSLNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIYNYVA 805
            +PFK +PKLP NFE+ TW+ +R AV A+  K+ ++ S E+LY+ VED+C+HK+ G LY  L++EC  H++  + AL      +G   D  +FL  V+  WQDHC+ ML IRSI LYLDR+YV+Q   ++ +W+MGL LFR  L +                          +E K + G+L LIE++R GE+V++ LL+ L++M  +LG Y   F K F++ T  ++AAEG + M+  DV  +L HVE RL E  E C+ YL+  T+K L+S  E +LL  H  T+++KGFG LMDA RV DL RMYLL  R VG    +K A +AYI+  G  ++ DE ++K+MV  LL+FK + D++   +     N    N +K+ FE  +N+R  RPAEL+AKFID KL+ G KG SE E+E +LDK +VLFR++  KDVFEAFYKKDLAKRLLLGKSAS D EKSMI+KLK ECG+ FTNKLEGMFKD++LSRE+  ++ Q    S +   +    +E +VHVLTTGYWP +P  ++ +P  L  Y   F ++Y  K+ GRRLMWQ++LG CV+KA F  G +ELSVS FQ +VL+ FND     +SF +IK +T +ED ELRRTLQSLACGKV  R+L K+PKG+EVED D F+ N  F   L+RIK+N IQLKETVEEN  T   V +DRQYQIDAAIVRIMK RK LSH LL++ELF QLKFP  P D+KKR+ESLI+R+YL RD  NP +YNY+A
Sbjct:  172 KPFKDKPKLPANFEDATWDKIRAAVSAIHVKQPVSCSLEQLYQNVEDLCLHKLSGNLYQRLQQECETHISAKLNAL------VGQSPDPVVFLSHVERCWQDHCDQMLMIRSIALYLDRTYVIQNSSVRSLWDMGLQLFRKHLTS-----------------------CPEVEHKTVTGILRLIEKERTGETVDRTLLKHLLRMFSALGTYSESFEKPFIDCTAEFYAAEGTRYMQQTDVPDYLRHVEARLHEENERCLLYLDANTRKHLISTSEKQLLERHSPTILDKGFGMLMDANRVADLHRMYLLLAR-VGALESLKQALSAYIKATGHSIIVDEEKDKDMVSTLLDFKARLDMIWEESF--SKNEPFANTIKEAFEHLINLRQNRPAELIAKFIDGKLRAGNKGTSEEELESMLDKVLVLFRYIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSREINESFKQ----SSQARTKLPAGIEMNVHVLTTGYWPTYPPMDIRLPHELNVYQDIFKQFYLSKHSGRRLMWQNSLGHCVLKAEFPKGKRELSVSLFQTVVLMLFNDSLR--LSFQDIKDSTGIEDKELRRTLQSLACGKV--RILQKQPKGREVEDDDVFTFNEDFTAPLFRIKVNAIQLKETVEENASTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQVYNYLA 885

[Close]

BLAST of NO10G02840 vs. NCBI_GenBank
Match: PTQ39897.1 (hypothetical protein MARPO_0043s0127 [Marchantia polymorpha])

HSP 1 Score: 726.5 bits (1874), Expect = 9.200e-206
Identity = 391/754 (51.86%), Postives = 506/754 (67.11%), Query Frame = 0

Query:   52 RPFKVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMCVHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDVWQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGRAXXXXXXXXXXXXXXXXXXXXXXLEIKIIKGLLVLIERQRNGESVNQALLRSLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVERRLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQRVEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDLLEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFIDVKLK-GEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLGKSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQYCEASGERGREGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYTGKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERGVSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFSLNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMKARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIYNYVA 805
            +PFK +PKLP NFE+ TW  +R AV+A+  K+ ++ S EELYRA ED+C+HKM G LY  L++EC  H+   + +L      +G   D  +FL  V+  WQDHC+ ML IRSI LYLDR+YV+Q   ++ +W+MGL LFR  L++                          +E K + GLL LIE++R GE+V++ L++ L++M  +LG+Y   F + FLE T  ++AAEG + M+  DV  +L HVE RL E  E C+ YL+  T+K LV+  E +LL  H  ++++KGF  LMDA RV DL+RMY L  R V     ++ A ++YI+  G ++V DE ++K+MV  LL+ K + D +   +     N    N +KD  E  +N+R  RPAEL+AKFID KL+ G KG SE E+EG LDK +VLFRF+  KDVFEAFYKKDLAKRLLLGKSAS D EKSMI+KLK ECG+ FTNKLEGMFKD++LSRE+  ++ Q  +A  +        +E +VHVLTTGYWP +P  EV +P  L  Y   F E+Y  K+ GRRLMWQ++LG CV+KA F  G KELSVS FQ +VL+ FND     +SF EIK  T +ED ELRRTLQSLACGKV  RVL K+PKG+EVED D F  N +F   L+RIK+N IQLKETVEEN  T   V +DRQYQIDAAIVRIMK RK LSH LL++ELF QLKFP  P D+KKR+ESLI+R+YL RD +NP IYNY+A
Sbjct:   98 KPFKDKPKLPTNFEDVTWAKIREAVMAIHLKQPVSCSLEELYRAAEDLCLHKMSGNLYRRLQQECETHIMAKLRSL------VGQSPDPVVFLSHVEKCWQDHCDQMLMIRSIALYLDRTYVIQNSNVRSLWDMGLQLFRKHLSS-----------------------CPEVENKTVSGLLKLIEKERMGETVDRTLVKHLLRMFSALGIYSESFERPFLECTADFYAAEGNRFMQQTDVPDYLKHVEARLHEENERCLLYLDASTRKPLVATAEKQLLDRHTVSILDKGFSVLMDANRVGDLQRMYTLFAR-VSALELLRQALSSYIKATGQDIVMDEEKDKDMVSSLLDLKARLDTIWEESF--SKNESFANTVKDACEHLINLRQNRPAELIAKFIDGKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSREINDSFRQSAQARTKL----PSGIEMNVHVLTTGYWPTYPPMEVRLPHELNVYQDIFKEFYLSKHSGRRLMWQNSLGHCVLKANFPKGKKELSVSLFQTVVLMLFNDAHT--LSFQEIKDTTAIEDKELRRTLQSLACGKV--RVLLKQPKGREVEDEDTFVFNEEFVAPLFRIKVNAIQLKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKMLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA 811

The following BLAST results are available for this feature:

BLAST of NO10G02840 vs. NCBI_GenBank

BLAST of NO10G02840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM25493.1	0.000e+0	74.35	ubiquitin-protein cullin 4 [Nannochloropsis gadita...	[more]
CBJ49182.1	3.400e-216	53.90	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_024371001.1	5.200e-209	53.32	cullin-4-like [Physcomitrella patens] >PNR57707.1 ...	[more]
XP_017235141.1	5.800e-208	52.33	PREDICTED: cullin-4 [Daucus carota subsp. sativus]	[more]
XP_024373193.1	2.200e-207	52.52	cullin-4-like [Physcomitrella patens] >XP_02437319...	[more]
GAQ79363.1	3.700e-207	52.12	cullin 4 [Klebsormidium nitens]	[more]
XP_024391521.1	8.300e-207	52.39	cullin-4-like [Physcomitrella patens] >PNR43901.1 ...	[more]
EFJ14633.1	1.100e-206	51.06	ubiquitin-protein ligase, cullin 4 [Selaginella mo...	[more]
XP_002984123.2	1.100e-206	51.06	cullin-4 [Selaginella moellendorffii]	[more]
PTQ39897.1	9.200e-206	51.86	hypothetical protein MARPO_0043s0127 [Marchantia p...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ncniR004	ncniR004	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR015	ngnoR015	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO10G02840.1	NO10G02840.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|670153	gene_3922	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100032g41	gene5006	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO10G02840.1	NO10G02840.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO10G02840 ID=NO10G02840|Name=NO10G02840|organism=Nannochloropsis oceanica|type=gene|length=3325bp
GGGTCGTGCGGCAGCCATTGTGCTATATGAAAAAGTAGAAGAAGATGCAA
AGTGTAAGTTAAGTCAATGCATGAAGAAAGGAAGAAGCGCAGGGAGAGGA
GAGGGGAGGCTAATCGCGACGAGTGGCTGTGACTGTCGCGCCTTGCCCTG
CTCGCAGCCCTTCTTCACATACGTCTACCGACTCATGATCAGGCACGCTT
CAATGCGATTGACTTGAACGTGGTGGGTCGTGAGAGGGTCAGAGGGTAAC
CAGGAAGGGGGATTAAGCAAGAGGCTTGAGAGCCATGAATGTCGAAGAAT
TGAGGCGTCCGCGTGCCACACCTTGTGTTAGCTACGTTGCGAAACGAAGG
AGTGCAAGCGATCGATCGATAGAAAAACTAGAGTGCCTTTGATGTTGTGC
CTCGCTTAGTCGTTTAGACAAGgtatgtcatctcatttgggacttggatg
gctgtggtgaagcacatgaggcacatcagacaacctgaacaaccgtcaac
aactatcttgcctctcaacgaccttcccctttttcctccatccttcccgt
ccgtgccatctcacacatcgtcatctccattaccctatacctaaacacaa
gcgcagACGAGGCAGATAAGGCAGGGCAGGCAGCGACGGGTTCATAACCA
GCACTTATCCCGGCCGCAGCACCAACGATGATCCCTGCGGCGGCCTCGGC
TGCGTCGCGGCCAGCGGGAGGTTTTGCGCTGTCCAACGCAGGGAACAAAC
CACAGACCAGTAGCAGCGGCAATGGCGGCGCAGCGGGAGATAGCAACAAC
AACAACAAGAAGAAGAAAAAGATGGTCATCCGTCCTTTCAAGGTTCAGCC
GAAGCTGCCGGAGAACTTCGAGGAGACGACCTGGGAGACCCTGCGACGGG
CAGTGGTGGCGGTGCAAAGCAAGGAAGCAATGGCGATCAGCCATGAAGAG
CTGTACCGTGCCGTCGAAGACATGTGCGTGCACAAGATGGGTGGTCGGCT
CTATGACCATTTGAAGGAAGAGTGCATGCGGCACGTGGCGGGCGCTGTGG
GGGCCTTGGCGGCAACGGGGGGAGGGATGGGAGGGATGGTGGATCAGGCT
TTGTTTTTGGAGAGGGTGGATGACGTCTGGCAAGACCATTGCGAGCACAT
GCTGACGATTCGAAGCATCTTTTTGTACCTGGACCGGAGCTACGTAATGC
AGATGCAGGGTTTGCAGCCGATTTGGGAGATGGGTCTGACACTGTTTAGG
CTCCAATTAGCAGCACAGGGACGTGCCGCCGGCTCTGTGGCAGCAGCAGC
AGCAGCAGCAACAGCTGGAGGAAGAGCAACAGGAGGAGGAGGACTGGAGA
TTAAGATTATCAAGGGATTGTTGGTGTTGATTGAGCGGCAACGGAACGGA
GAGAGTGTGAATCAGGCGTTGTTGAGGTCGTTGGTCAAGATGTTGGGGAG
TCTGGGGTTGTACAAACCCTTGTTTTTAAAAGCTTTCCTGGAAGACACTG
AGCGGTATTTCGCCGCGGAGGGGGTGAAAAAGATGGAGAGTTTGGATGTG
GTTGCTTTTTTGGTCCACGTGGAAAGGAGGTTGGCGGAGGCTGGGGAGGC
GTGTGTGGCGTACCTGGAGGGGGGGACGAAAAAGGCGCTAGTGAGTGCGA
TTGAGGCCCGTTTGCTGGCCCCCCACGTAACAACTTTGATCGAAAAGGGC
TTTGGCAGTTTAATGGATGCGCAGCGAGTGGAGGATTTGCGGAGGATGTA
TTTGTTGTGTTGTCGGAAGGTGGGGGGGGAGGGGGAAGTGAAGTCAGCGT
TCAATGCTTATATTCGAAGGAGGGGGGCGGAACTGGTGAGTGATGAGGCG
CGGGAGAAAGAGATGGTCGAAGACTTGTTGGAATTCAAGGGTAAATGTGA
TATTGTCTTGATGTCTGCGCTAGGGGGAAAGGCGAATGTGGGGTGCGTCA
ATGCCTTGAAGGATGGGTTTGAATTTGCAGTGAATGTGCGACCGACCCGA
CCGGCGGAATTGCTAGCAAAGTTTATCGATGTCAAGCTGAAGGGAGAGAA
AGGTGTGAGCGAAGTGGAGGTGGAGGGGTTGCTGGACAAGGCGATGGTGC
TGTTTCGGTTCGTGGGCTCGAAGGATGTTTTTGAGGCGTTTTATAAGAAG
GATTTGGCAAAGCGGCTCCTGTTGGGGAAGAGCGCGAGTGCGGACTTGGA
AAAGAGCATGATTGCGAAGTTGAAGGCGGAGTGTGGGGCCACATTCACCA
ATAAATTGGAAGGGATGTTCAAGGATATGGATCTATCGAGGGAGCTGATG
GGGAATTACACCCAGTATTGCGAGGCGTCGGGGGAAAGAGGGAGGGAGGG
AGGGAGGGAGGTCGAAACGAGTGTGCACGTGTTGACAACGGGGTATTGGC
CGGCATTTCCCTTAAGCGAGGTGGTGGTGCCGATGGTGCTTGAGCCGTAC
ATGAGGCGGTTCTCGGAGTACTACACCGGCAAGTACCAGGGGCGTCGATT
AATGTGGCAGCATGCCCTGGGAACGTGTGTGGTCAAGGCGCGTTTTTTGG
CAGGGACGAAGGAGTTGAGCGTGTCGTTCTTCCAGATGTTGGTGTTGTTG
TGTTTTAATGATGGAAGGGAAAGGGGGGTGTCATTTGCGGAGATTAAGGC
TGCCACGCGGGTGGAGGATGGGGAGCTGAGACGTACGTTGCAGAGTTTGG
CGTGCGGGAAAGTGAATCAGCGAGTGCTGCACAAGGAGCCCAAGGGCAAA
GAGGTGGAGGACAGCGATGCGTTTAGTTTGAATTTGAAATTTGAACATAA
GCTTTACCGGATCAAAATAAATACAATTCAGCTGAAGGAGACGGTGGAGG
AGAATGAAAAGACCCACGCAGACGTCCACAGGGATAGGCAGTATCAGATT
GATGCGGCTATTGTCAGGATCATGAAGGCGCGGAAGAAGCTGTCCCATAA
TCTGTTGTTGAGTGAGTTGTTCGGTCAGTTAAAGTTCCCCGCCACACCCG
TGGATATTAAGAAGCGGGTGGAGAGTCTGATTGAGCGAGATTATTTGTGT
AGGGATGACACGAACCCTTCAATTTATAATTATGTGGCATAGGGGGAGGG
AGGGAAGGAGGAGGAAGGAAGGGAGGAGAAAGGAAAGATGTGGAAAACCA
GAAACCAAGAAGTGGGGTTCGGATGCGAGAGGGGCGACATAGACAGTGCA
CATACATTGTACATAATGCACCTACAGAAGTAAGCTTTGGTAAGCGGTCA
AAAACCGTAACTCACATAAGAAAAGAAACTAAACAAATACAGTCATAAAA
GGGAAGAAAGAATGCAATGTTTGCT

protein sequence of NO10G02840.1

>NO10G02840.1-protein ID=NO10G02840.1-protein|Name=NO10G02840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=805bp
MIPAAASAASRPAGGFALSNAGNKPQTSSSGNGGAAGDSNNNNKKKKKMV
IRPFKVQPKLPENFEETTWETLRRAVVAVQSKEAMAISHEELYRAVEDMC
VHKMGGRLYDHLKEECMRHVAGAVGALAATGGGMGGMVDQALFLERVDDV
WQDHCEHMLTIRSIFLYLDRSYVMQMQGLQPIWEMGLTLFRLQLAAQGRA
AGSVAAAAAAATAGGRATGGGGLEIKIIKGLLVLIERQRNGESVNQALLR
SLVKMLGSLGLYKPLFLKAFLEDTERYFAAEGVKKMESLDVVAFLVHVER
RLAEAGEACVAYLEGGTKKALVSAIEARLLAPHVTTLIEKGFGSLMDAQR
VEDLRRMYLLCCRKVGGEGEVKSAFNAYIRRRGAELVSDEAREKEMVEDL
LEFKGKCDIVLMSALGGKANVGCVNALKDGFEFAVNVRPTRPAELLAKFI
DVKLKGEKGVSEVEVEGLLDKAMVLFRFVGSKDVFEAFYKKDLAKRLLLG
KSASADLEKSMIAKLKAECGATFTNKLEGMFKDMDLSRELMGNYTQYCEA
SGERGREGGREVETSVHVLTTGYWPAFPLSEVVVPMVLEPYMRRFSEYYT
GKYQGRRLMWQHALGTCVVKARFLAGTKELSVSFFQMLVLLCFNDGRERG
VSFAEIKAATRVEDGELRRTLQSLACGKVNQRVLHKEPKGKEVEDSDAFS
LNLKFEHKLYRIKINTIQLKETVEENEKTHADVHRDRQYQIDAAIVRIMK
ARKKLSHNLLLSELFGQLKFPATPVDIKKRVESLIERDYLCRDDTNPSIY
NYVA*

Synonyms

Publications