NO10G02830, NO10G02830 (gene) Nannochloropsis oceanica

Overview
NameNO10G02830
Unique NameNO10G02830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1626
Alignment locationchr10:777461..779086 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:777461..779086 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G02830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001152NSK001152Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G02830.2NO10G02830.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO10G02830.1NO10G02830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G02830.2NO10G02830.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO10G02830.1NO10G02830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G02830 ID=NO10G02830|Name=NO10G02830|organism=Nannochloropsis oceanica|type=gene|length=1626bp
CGGGGATGGGTTTGAGCCCAACAAGAGGAGGGGAGGTTGGGCACGTCGGC
TCGGTCGCCGCGTCGGCAATGCATCACATCATACTCTTCCTGTCCGTCTT
GCTTTTGGTGCCGTAACCTACCCGCGCTCTGACCACACTCACAGGTGTCT
GCCTATCCACAAATACATAGATTTGGTGCGGAGCGATGTCGGCAGGCGGG
CGCAAGACCGCCTGAGGGGACGCGTGAGACGACATCATGgtgagtgcgct
accacggtcacgtttattccttgacttatccgtaagacactgccatcttt
gcatgcattcccggtaccaccttgcgtatattatgcccttctcatacaac
ctgtcatcttgtggaaacagAACCCTGTTGGTTTTCGTGGGTCCGGACCG
CTCTTTGATCGTGTTCATGCGACGGGGGGGTCAGCGCGGCGGGATGACAG
CGCAACGAGCTCGGCGGGCAACAACGGAGGAGGCTTTAACGAGGTCAATT
CTTATATTGAGgtatgtgcgtcggtgtatgtgagagtacagagtagtcga
aagggtgtcgatcaactcgcatcccgctttctcatcgatacgctcccacc
cttccctccctccctccctcgcttctctcaccaatcagTCGCAGCAACGA
CGCATTCAAGAGCTAGAGCGGATTAACATCGATCTCGAGCGCCGCCTAGA
GCAACAAGCTCGCGAGAGGATGAAGCTTGAGAGGGAGTCCGTGGAGAACA
AGCGGGCATGGGAGGCACAGCACACCAACATTGGCCACgtatgtattttg
cgtctggggcgacaagaggaaaaatagaggagctctgagcgggcgtagta
gctgataagctgctcattatcctcatttctttctctcccttctatacata
tgtacacataaatgtatgtatttattacctctgtcctgctgttaaccttc
gttttctatctctgtttccctccctttccctaccatcaactaccacagGA
ACGTGATGAATGGAGAGGCCGCTATGAGAAGGAACTCCTGCACATGCAAA
AACTCCGCGAGAACAACCGACGCCTAGAGCGAGAGCTGCATGGTTTCCTT
CAAAAGAAGTATGATTTTATGCAGATGCAGTCGAGGTCGGCCTCGGGGAG
CACTGGAGGTGGTAGTGGTGGTGGTGGAGGAGGAGGAGTAGGGGGGGGAG
GGGGAACGAAAGGTGGGCAGCCACTTTTAAACGGACGGGAAGGTGACTCA
CATGGCGGAACGCGGAGCATGCGCGCGGCGACGATGGGAAGCAGCGGTGG
GCGAGGAGGAGAGCGAGGAGAGGGAGGGGGAGGCGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGAGAGAGTTGGCATAGGGGCTGGGGAAGCCGTGCCG
CTTAACCCAAAAGACCTCACCCCTGAGACAATGAGGGAGAAGCGCGTTAT
CCAGACGATGTGCGACTTTTTTGGCTTTTGAAAAGTGTGGGTTTGGTTGC
GAGCAGTCCATTTGTCTTGCACAGCATGCAAATGCCACGAACTCTCTCCT
TAAGAATGACCGTGTACATATACAATCTTCCCTTTTCATCACTTGTCATC
ACAAAGAAATGAAACACGAATACGTA
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protein sequence of NO10G02830.2

>NO10G02830.2-protein ID=NO10G02830.2-protein|Name=NO10G02830.2|organism=Nannochloropsis oceanica|type=polypeptide|length=190bp
MYVFITSVLLLTFVFYLCFPPFPYHQLPQERDEWRGRYEKELLHMQKLRE
NNRRLERELHGFLQKKYDFMQMQSRSASGSTGGGSGGGGGGGVGGGGGTK
GGQPLLNGREGDSHGGTRSMRAATMGSSGGRGGERGEGGGGGGGGGGGGG
GERVGIGAGEAVPLNPKDLTPETMREKRVIQTMCDFFGF*
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protein sequence of NO10G02830.1

>NO10G02830.1-protein ID=NO10G02830.1-protein|Name=NO10G02830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=259bp
MNPVGFRGSGPLFDRVHATGGSARRDDSATSSAGNNGGGFNEVNSYIESQ
QRRIQELERINIDLERRLEQQARERMKLERESVENKRAWEAQHTNIGHER
DEWRGRYEKELLHMQKLRENNRRLERELHGFLQKKYDFMQMQSRSASGST
GGGSGGGGGGGVGGGGGTKGGQPLLNGREGDSHGGTRSMRAATMGSSGGR
GGERGEGGGGGGGGGGGGGGERVGIGAGEAVPLNPKDLTPETMREKRVIQ
TMCDFFGF*
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Synonyms
Publications