NO10G02610, NO10G02610 (gene) Nannochloropsis oceanica

Overview
NameNO10G02610
Unique NameNO10G02610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1113
Alignment locationchr10:712365..713477 +

Link to JBrowse

Properties
Property NameValue
DescriptionCobalamin synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:712365..713477 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008818cobalamin 5'-phosphate synthase activity
GO:0051073adenosylcobinamide-GDP ribazoletransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009236cobalamin biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR003805CobS
Homology
BLAST of NO10G02610 vs. NCBI_GenBank
Match: EWM25475.1 (cobalamin synthase [Nannochloropsis gaditana])

HSP 1 Score: 558.5 bits (1438), Expect = 1.500e-155
Identity = 290/381 (76.12%), Postives = 331/381 (86.88%), Query Frame = 0
Query:    1 MAPNKRGGPLTRSSTASSGTK-----------SLNLNDHSQSVISKQEIEDRGAGTSEDTDTYLDMPFLRGEKRVFFTAVIFLTRLHTPRWCEADHHPAYLMRSMMHFPFLGLIIGIWAAVWLEAAAVLWSPYIAAAVSTMAAVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMVTQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLYNWFADSQKLLTLPRLFAGTLVSIAVPLVLLPLEQALHVYLVVLVVTIASSYYGNLIIGGVIGDYLGATIQICELLIYLLLSADMKAAQANPSPLVVLLGMALLPILTSRPLIDFTMVDQC 371
            MAPN+RGGPLTRSS+ ++ TK           S  ++D+  SVISK+EIEDRGAGT EDTDTY+D+PFLRGEKRVFFTAVIFLTRL+ PRW EADHHPAYLMRSMMHFPFLGL +GIWAAVWLEAAAVLW+P++AAA ST+A VWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLE L  ++ +  +T  +FLP L+LSPASVALLVAHTVSRWTVLPLIY CHY+QDEQSAKRGLYNWFADSQ+LLTLPRL  GTLV+I VP++LLP+EQA+ V+LVV++VT+ +SYYGNLIIGGVIGD+LGATIQ+CEL +YLLLSAD+K  Q NP PLV+L   A+LPILTSRPLIDF    +C
Sbjct:    1 MAPNRRGGPLTRSSSGNTPTKRTKATPKASETSSAVHDNDLSVISKKEIEDRGAGTDEDTDTYVDLPFLRGEKRVFFTAVIFLTRLNVPRWAEADHHPAYLMRSMMHFPFLGLCVGIWAAVWLEAAAVLWTPFVAAAASTLAGVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLEVLQSLSQSD-ITISTFLPSLSLSPASVALLVAHTVSRWTVLPLIYSCHYIQDEQSAKRGLYNWFADSQRLLTLPRLCLGTLVTILVPVLLLPVEQAMSVFLVVVLVTLGASYYGNLIIGGVIGDFLGATIQVCELCVYLLLSADLKQTQTNPFPLVMLAATAVLPILTSRPLIDFGFRAEC 380          
BLAST of NO10G02610 vs. NCBI_GenBank
Match: PRW60400.1 (adenosylcobinamide-GDP ribazoletransferase [Chlorella sorokiniana])

HSP 1 Score: 338.6 bits (867), Expect = 2.500e-89
Identity = 192/368 (52.17%), Postives = 239/368 (64.95%), Query Frame = 0
Query:    1 MAPNKRGGPLTRSSTASSGTKSLNLN----DHSQSVISKQEIEDRGAGTSEDTDTYLDMPFLRGEKRVFFTAVIFLTRLHTPRWCEADHHPAYLMRSMMHFPFLGLIIGIWAAVWLEAAAVLW--SPYIAAAVSTMAAVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMVTQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLYNWFADSQKLLTLPRLFAGTLVSIAVPLVLLPLEQALHVYLVVLVVTIASSYYGNLIIGGVIGDYLGATIQICELLIYLLLSADMKAAQANPSPLVVLLGMALLPILTSRPLI 363
            MAPNKRG     + T       L       D++ SVI+K+E+E RG+GT E  DTY     L  E RVFFT ++FLTRL  P W   DHHPAYLMR++M FP +G  IG+W A W  AA +LW   P +A A+ST+A VW+TG FHEDGLADS+D FGGGWGR QILRIM D+RVGTYALVG  L++  K   L  L P                    A+ AL+ AH  +RWT LPL Y CHY+QDE+ AKRGLYNWFA SQ+LLT PRL  GTL ++AV ++ LP  QAL V   VL +T+AS+YYG+ ++GGV+GDYLGATI + EL IYL+L+AD  A  A   PL VL   A +P++ +R +I
Sbjct:    1 MAPNKRG---AAAKTDKENRPDLGPGEEPYDYASSVITKEEVEARGSGTQEARDTYDPRRPLLSELRVFFTGIMFLTRLPVPAW--VDHHPAYLMRAVMWFPLIGATIGLWGAAWYNAATLLWPQPPALAGAISTLATVWLTGCFHEDGLADSIDGFGGGWGRAQILRIMKDSRVGTYALVGTALILQAKTGVLGALGP------------------GGAAAALVAAHAAARWTALPLTYGCHYIQDEEDAKRGLYNWFAQSQRLLTPPRLAFGTLSTMAVVVLALPAAQALAVGATVLCMTVASAYYGHAVLGGVVGDYLGATIAVTELAIYLVLTADWAAVAARWQPLAVLAAAAAVPVIYTRRII 345          
BLAST of NO10G02610 vs. NCBI_GenBank
Match: PNW88609.1 (hypothetical protein CHLRE_01g036950v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 288.1 bits (736), Expect = 3.800e-74
Identity = 177/397 (44.58%), Postives = 222/397 (55.92%), Query Frame = 0
Query:    1 MAPNKRGGPLTRSSTAS-SGTKSLNLNDH------------------------SQSVISKQEIEDRGAGTSEDTDTYLDMPFLRGEKRVFFTAVIFLTRLHTPRWCEADHHPAYLMRSMMHFPFLGLIIGIWAAVWLEAAAVLWSPYIA-----AAVSTMAAVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMVTQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLYNWFADSQKLLTLPRLFAGTLVSIAVPLVLLPLEQALHVYLVVLVVTIASSYYGNLIIGGVIGDYLGATIQICELLIYLLLSAD---MKAAQANPSPLVVLLGMALLPILTSRPLIDF 365
            MAPNKRGGP +  + A   G K  +                            S  +ISK+E+E RGAGT +  DTY    F   E RVFFT ++FLTRL  P     DHHPA+L+RSMM FP LG +IG W AV+  AAA LW P  A     AA+ST + VW+TG FHEDGLAD+ D FGGGWGR QILRIM D+RVGTYALVG  L + +K   L           +                     H  SRWT + LIY C YVQD++ AKRG+YNWFA S +LLT PRL  GTL ++               Y V   VT+AS  YGN ++GGVIGDYLGATIQ+ E+L+Y  LSAD   +  +    +PL++L  +A LP++  R ++D+
Sbjct:    1 MAPNKRGGPPSEETLAKLKGKKGQSXXXXXXXXXXXXXXXXXXXXAAEPCDFASGGMISKEEVEARGAGTDDPGDTYSRARFAWSEWRVFFTGLMFLTRLPVPP--GIDHHPAFLVRSMMWFPLLGALIGGWGAVFFNAAAALWPPAAAGSLLPAAISTFSTVWLTGCFHEDGLADTFDGFGGGWGRNQILRIMKDSRVGTYALVGTALALQLKTSGL---------AAIXXXXXXXXXXXXXXXXXXXXXHAASRWTSMVLIYVCEYVQDDEDAKRGMYNWFAQSTRLLTAPRLALGTLQALVXXXXXXXXXXXXXXYAVTAAVTVASGLYGNAVLGGVIGDYLGATIQVAEILVYCALSADWSRVAGSWEGAAPLLLLAAVAALPVIYCRRIVDW 386          
BLAST of NO10G02610 vs. NCBI_GenBank
Match: KXZ55222.1 (hypothetical protein GPECTOR_3g364 [Gonium pectorale])

HSP 1 Score: 239.6 bits (610), Expect = 1.600e-59
Identity = 154/386 (39.90%), Postives = 200/386 (51.81%), Query Frame = 0
Query:    1 MAPNKRGGPLTRSS-------------TASSG-------TKSLNLNDHSQSVISKQEIEDRGAGTSEDTDTYLDMPFLRGEKRVFFTAVIFLTRLHTPRWCEADHHPAYLMRSMMHFPFLGLIIGIWAAVWLEAAAVLWSPYIAAAVSTMAAVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMVTQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLYNWFADSQKLLTLPRLFAGTLVSIAVPLVLLPLEQALHVYLVVLVVTIASSYYGNLIIGGVIGDYLGATIQICELLIYLLLSAD--MKAAQANPSPLVVLLGMALLPILTSRPLIDF 365
            MAPNKRGGP +  +              A+SG         +   ND++  VI+K E+E RG+GT +  DTY    F   E RVFFT ++FLTRL  P     DHHPA+L+RSMM FP  G +IG W AVWL AAAVL                +TG FHEDGLAD+ D FGGGWGR QILRIM D+RVGTYALVG  L + +K  +                                      RW+ +PL+  C Y+QD++ AKRG+YNW A S +LLT PR+  GTL+++A P                               GGV+GD+LGATI +CE L Y +L+AD     +     PL+VL  +A LP++ SR ++D+
Sbjct:    1 MAPNKRGGPPSTEALAILKGKKQPAALKAASGRAAEARDQDAAEPNDYASGVITKAEVEARGSGTDDHGDTYNSKQFWWSEYRVFFTGLMFLTRLPVPP--GIDHHPAFLVRSMMWFPLFGALIGAWGAVWLNAAAVLXXXXXXXXXXXXXXXXLTGCFHEDGLADTFDGFGGGWGRAQILRIMKDSRVGTYALVGTALALQLKTAA-------------XXXXXXXXXXXXXXXXXXXXXXXXXRWSCIPLVVCCTYIQDDEDAKRGMYNWMAASTRLLTPPRIALGTLIALAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVVGDFLGATIAVCETLSYCVLAADWGRLGSMEGAWPLLVLAAVAALPMIYSRRVVDW 371          
BLAST of NO10G02610 vs. NCBI_GenBank
Match: XP_013904754.1 (Cobalamin synthase [Monoraphidium neglectum] >KIZ05735.1 Cobalamin synthase [Monoraphidium neglectum])

HSP 1 Score: 230.3 bits (586), Expect = 9.500e-57
Identity = 134/298 (44.97%), Postives = 182/298 (61.07%), Query Frame = 0
Query:   70 IFLTRLHTPRWCEADHHPAYLMRSMMHFPFLGLIIGIWAAVWLEAAAVLWSPYIAAAVSTMAAVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMVTQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLYNWFADSQKLLTLPRLFAGTLVSIAVPLVLLPLEQALHVYLVVLVVTIASSYYGNLIIGGVIGDYLGATIQICELLIYLLLSADMKAAQANPS--PLVVLLGMALLPILTSRPLIDFT 366
            +FLTRL  P     DHHP YL+RS  +FP +G  +G+W AV+  A A LW   IAA VST+A VW+T            D FGGGWGR QILRIM D+RVGTYALVG+ +++ +K+ +++                    +L  A+  ++VAH VSRW  LPL+ FC Y++D++ AK G+YN  A  Q LLT PR   GTLVS+AVP ++L     L V+   LV+T +S YY   II GV+GDY+GATI I E+ +YL LSAD  A  A     P++VLL   ++P++  R ++DF+
Sbjct:    1 MFLTRLPVPP--GTDHHPRYLLRSTAYFPLIGAAVGLWGAVFFTAGAALWPRPIAAGVSTLATVWLT------------DGFGGGWGRAQILRIMRDSRVGTYALVGVAILLHIKITAMQ--------------------SLPDAASVIVVAHCVSRWPSLPLLTFCEYIEDDEHAKAGMYNVMARCQPLLTWPRFLLGTLVSLAVPALVLGAHGTLVVWATTLVITTSSIYYCRAIIQGVVGDYIGATIVITEIAVYLALSADWAALAAEDGWRPILVLLAALVVPVVWGRRIVDFS 264          
BLAST of NO10G02610 vs. NCBI_GenBank
Match: PNH03985.1 (Cobalamin synthase [Tetrabaena socialis])

HSP 1 Score: 216.5 bits (550), Expect = 1.400e-52
Identity = 140/367 (38.15%), Postives = 187/367 (50.95%), Query Frame = 0
Query:   26 NDHSQSVISKQEIEDRGAGTSEDTDTYLDMPFLRGEKRVFFTAVIFLTRLHTPRWCEADHHPAYLMR----------------------------SMMHFPFLGLIIGIWAAVWLEAAAVLWSPYIAAAVSTMAAVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMVTQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLYNWFADSQKLLTLPRLFAGTLVSIAVPLVLLPLEQALHVYLVVLVVTIASSYYGNLIIGGVIGDYLGATIQICELLIYLLLSADMKAAQANPSPLVVLLGMALLPILTSRPLIDF 365
            ND++  VI+K+E+E RGAGT +  DTY         +R++++    + +  +P    A    A L R                                    G +IG W A +  AA VLW P IAA +ST A VW+TG FHEDGLAD+ D FGGGWGR QILRIM D+RVGTYALVG  L + +K                                        SRWT +PLIY C Y+QD++ AKRG+YNW A S +LLT  RL   T ++ A+PL  L   +A  V+LV          YGN ++GGVIGD++GATIQ+ E+L  L        + A  SPL+VL G+A LP++  R ++D+
Sbjct:   25 NDYASGVITKEEVEARGAGTDDHGDTY-------DPRRLWWSEYRAVNKSMSPEARSARAVAAALTRFGAAGCWAPXXXXXXXXXXXXXXXXXXXXXXXXXLFGALIGAWGAAFFAAALVLWPPGIAALISTFATVWLTGCFHEDGLADTFDGFGGGWGRAQILRIMKDSRVGTYALVGTALTLQLK-------------AAAXXXXXXXXXXXXXXXXXXXXXXXASRWTAIPLIYCCTYIQDDEDAKRGMYNWMAQSTRLLTARRLLLSTALAAALPLAALGAARAGAVWLVTAAXXXXXXAYGNAVLGGVIGDFMGATIQVAEVLSVLCADWSRLDSLAAGSPLLVLAGVAALPVIYCRRVVDW 371          
BLAST of NO10G02610 vs. NCBI_GenBank
Match: GBG29382.1 (Hypothetical Protein FCC1311_056042 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 215.7 bits (548), Expect = 2.400e-52
Identity = 133/306 (43.46%), Postives = 185/306 (60.46%), Query Frame = 0
Query:   32 VISKQEIEDRGAGTSEDTD-TYLDMPFLRGEKRVFFTAVIFLTRLHTPRWCEADHHPAYLMRSMMHFPFLGLIIGIWAAVWLEAAAVLWSPYIAAAVSTMAAVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMVTQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLYNWFADSQK--LLTLPRLFAGTLVSIAVPLVLLPLEQALHVYLVVLVVTIASSYYGNLIIGGVIGDYLGATIQICELLIYLLLSADM 335
            V+S +E+  RG G +E ++    +  + +  KR    A +FLTRL  P +   DH+P  L+  MM+FP +G I+GIW  +W EA   LW+P IAA  ST+A VW++G FHEDGL D+ DAFGGGW R QILRIM D+R GTYA+V M L M  K+  LE L    + G            L+    AL+VAHT SR T L L+    YV DE   K  LYN FA   +  LL+ PR+   ++ ++ V  ++LPLE+ + + +V+ ++ + S +Y   I+GGVIGDYLGA I + E LIY+ L+AD+
Sbjct:   44 VVSSEEVAGRGDGVNEASEGGEAEAEWFKELKRA-LVAAMFLTRLPMPAF--VDHNPRDLVPGMMYFPLIGSIVGIWCGLWYEALVQLWNPLIAACASTLAGVWVSGCFHEDGLMDTTDAFGGGWTRAQILRIMKDSRCGTYAVVVMNLFMTAKIALLEDLGSDVEHG------------LAQVQGALVVAHTCSRITSLWLVSLFDYVHDEGDDKGLLYNTFAGCLRAGLLSWPRVILASVYALGVGALILPLERLVLIIVVLAIMIVGSGFYARSILGGVIGDYLGAIIMLTEALIYMTLTADL 334          
BLAST of NO10G02610 vs. NCBI_GenBank
Match: KOO28632.1 (cobalamin synthase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 214.9 bits (546), Expect = 4.100e-52
Identity = 133/302 (44.04%), Postives = 176/302 (58.28%), Query Frame = 0
Query:   33 ISKQEIEDRGAGTSEDTDTYLDMPFLRGEKRVFFTAVIFLTRLHTPRWCEADHHPAYLMRSMMHFPFLGLIIGIWAAVWLEAAAVLWSPYIAAAVSTMAAVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMVTQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLYNWFADSQKLLTLPRLFAGTLVSIAVPLVLLPLEQALHVYLVVLVVTIASSYYGNLIIGGVIGDYLGATIQICELLIYLLLSADM 335
            IS   +  RG GT+  T         R E R FFT V+FLTRL  P WC  DHHP YLMR M +FP LG +IG+WAA + +AAA LW P +AA +S+ A +W+TG FHEDGL D+LD FGGGW + QILRIM D+R G+YA +G  L +  K  +L  L   + +G V  +          A  +++VA +V+R +  PLIY   YV D++ AK   YNWF +S++LL LPR+      + AV   LL   +A    L   + T            GV+GD+LGATI + EL +YL LSAD+
Sbjct:   53 ISAAVVASRGTGTAVRTPLEEFEALPRDELRCFFTGVMFLTRLPCPGWC--DHHPGYLMRGMAYFPVLGALIGLWAAAFYDAAASLWPPLVAAVLSSGATLWLTGCFHEDGLCDTLDGFGGGWTKAQILRIMKDSRNGSYATMGGCLWVVAKSAALARLGEGSVSGSVWALG-----ASVGAGPSIVVAQSVARASAAPLIYAYEYVVDDEDAKGEYYNWFGESRRLLGLPRVLFALGSATAVAFTLLAPPEAARALLAGALGTAXXXXXXXXXXXGVMGDFLGATICMLELAVYLSLSADL 347          
BLAST of NO10G02610 vs. NCBI_GenBank
Match: XP_005775278.1 (hypothetical protein EMIHUDRAFT_95466 [Emiliania huxleyi CCMP1516] >EOD22849.1 hypothetical protein EMIHUDRAFT_95466 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 212.6 bits (540), Expect = 2.100e-51
Identity = 141/334 (42.22%), Postives = 185/334 (55.39%), Query Frame = 0
Query:   31 SVISKQEIEDRGAGTSEDTDTYLDM--------PFLRGEKRVFFTAVIFLTRLHTPRWCEADHHPAYLMRSMMHFPFLGLIIGIWAAVWLEAAAVLWSPYIAAAVSTMAAVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMVTQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLYNWFADSQKLLTLPRLFAGTLVSIAVPLVLLPLEQALHVYLVVLVVTIASSYYGNLIIGGVIGDYLGATIQICELLIYLLLSADMKAAQANPSPLVVLLGMALLPIL 357
            S+I + E+  RG GT++ T   LD           +  E R F+T V+FLTRL  P WC  DHHP YLMRSM HFP +G +IG WAA + +AAA LW P +AAAVS    +W+TG FHEDGL D+LD FGGGW + QIL+IM D+R G+YA +G  + +  K   L  L     A      S       + A   L+VA  V+R +  PLIY   YV D++ AK   YNWF +S++LL L R+      + AV                    T  +  YG  ++GGV+GD+LGATI + EL IYL L AD    +A+P PL+ L  +  LP L
Sbjct:   55 SMIDRSEVAARGTGTAKRTP--LDEFEAAARADGLVASELRSFWTCVMFLTRLPCPGWC--DHHPGYLMRSMAHFPLIGALIGAWAAAFYDAAASLWPPLVAAAVSMAGTLWLTGCFHEDGLCDTLDGFGGGWTKSQILKIMRDSRNGSYATMGGCMWVVAKAALLAEL--GRGAAGAGGASVWAVGGSAGAGPCLVVAQCVARASAAPLIYCYAYVVDDEDAKGEYYNWFGESRRLLGLRRVLVALATAAAVAHXXXXXXXXXXXXXXXXXGTAVAGEYGRSVLGGVMGDFLGATICVLELAIYLALGAD--TTRADPRPLLRLALVVALPQL 380          
BLAST of NO10G02610 vs. NCBI_GenBank
Match: XP_001690110.1 (predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 206.5 bits (524), Expect = 1.500e-49
Identity = 127/281 (45.20%), Postives = 152/281 (54.09%), Query Frame = 0
Query:    1 MAPNKRGGPLTRSSTAS-SGTKSLNLNDH------------------------SQSVISKQEIEDRGAGTSEDTDTYLDMPFLRGEKRVFFTAVIFLTRLHTPRWCEADHHPAYLMRSMMHFPFLGLIIGIWAAVWLEAAAVLWSPYIA-----AAVSTMAAVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMVTQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLYN 252
            MAPNKRGGP +  + A   G K  +                            S  +ISK+E+E RGAGT +  DTY    F   E RVFFT ++FLTRL  P     DHHPA+L+RSMM FP LG +IG W AV+  AAA LW P  A     AA+ST + VW+TG FHEDGLAD+ D FGGGWGR QILRIM D+RVGTYALVG  L + +K   L           +                     H  SRWT + LIY C YVQD++ AKRG+YN
Sbjct:    1 MAPNKRGGPPSEETLAKLKGKKGQSXXXXXXXXXXXXXXXXXXXXAAEPCDFASGGMISKEEVEARGAGTDDPGDTYSRARFAWSEWRVFFTGLMFLTRLPVPP--GIDHHPAFLVRSMMWFPLLGALIGGWGAVFFNAAAALWPPAAAGSLLPAAISTFSTVWLTGCFHEDGLADTFDGFGGGWGRNQILRIMKDSRVGTYALVGTALALQLKTSGL---------AAIXXXXXXXXXXXXXXXXXXXXXHAASRWTSMVLIYVCEYVQDDEDAKRGMYN 270          
The following BLAST results are available for this feature:
BLAST of NO10G02610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25475.11.500e-15576.12cobalamin synthase [Nannochloropsis gaditana][more]
PRW60400.12.500e-8952.17adenosylcobinamide-GDP ribazoletransferase [Chlore... [more]
PNW88609.13.800e-7444.58hypothetical protein CHLRE_01g036950v5 [Chlamydomo... [more]
KXZ55222.11.600e-5939.90hypothetical protein GPECTOR_3g364 [Gonium pectora... [more]
XP_013904754.19.500e-5744.97Cobalamin synthase [Monoraphidium neglectum] >KIZ0... [more]
PNH03985.11.400e-5238.15Cobalamin synthase [Tetrabaena socialis][more]
GBG29382.12.400e-5243.46Hypothetical Protein FCC1311_056042 [Aurantiochytr... [more]
KOO28632.14.100e-5244.04cobalamin synthase [Chrysochromulina sp. CCMP291][more]
XP_005775278.12.100e-5142.22hypothetical protein EMIHUDRAFT_95466 [Emiliania h... [more]
XP_001690110.11.500e-4945.20predicted protein [Chlamydomonas reinhardtii][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001125NSK001125Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G02610.1NO10G02610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585939gene_3951Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100207g7gene5028Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G02610.1NO10G02610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G02610 ID=NO10G02610|Name=NO10G02610|organism=Nannochloropsis oceanica|type=gene|length=1113bp
ATGGCCCCCAACAAGCGCGGTGGGCCCTTGACTCGGAGTAGCACGGCAAG
CAGCGGCACCAAAAGCCTTAATTTGAATGACCATTCCCAGTCCGTCATTT
CCAAGCAAGAGATCGAAGACCGAGGCGCTGGCACAAGCGAGGACACTGAC
ACGTATCTTGATATGCCTTTTTTACGCGGAGAGAAGCGCGTCTTTTTCAC
GGCTGTAATTTTCCTGACACGCCTACATACGCCTCGGTGGTGTGAAGCTG
ACCACCATCCCGCCTACCTCATGCGAAGTATGATGCACTTTCCTTTCTTG
GGGCTAATAATTGGCATCTGGGCCGCCGTCTGGCTTGAGGCCGCGGCGGT
GCTATGGTCCCCTTACATCGCTGCGGCCGTTTCGACCATGGCGGCGGTAT
GGATTACGGGGGCGTTTCATGAGGATGGGCTGGCGGATTCGCTGGATGCT
TTTGGTGGGGGATGGGGGAGGCTGCAAATTTTGCGCATTATGACTGACAC
GCGCGTGGGGACTTATGCGTTGGTGGGTATGATATTGGTGATGGGGATGA
AGTTGAAGAGCTTGGAGTGTTTGTTGCCGGTGACGGATGCAGGCATGGTA
ACTCAAGTGTCGTTCTTGCCTTTCTTGACCCTTTCTCCTGCGAGTGTCGC
ATTACTGGTCGCACACACAGTCTCCCGCTGGACGGTCCTCCCCTTGATCT
ACTTTTGTCACTACGTCCAAGACGAGCAAAGTGCCAAGCGGGGTTTGTAC
AATTGGTTTGCAGACTCTCAGAAGCTCTTGACCCTACCCCGTCTTTTTGC
TGGTACATTGGTCTCAATTGCCGTACCTCTGGTGTTGCTGCCTTTGGAGC
AGGCCCTGCATGTGTACCTAGTGGTGCTTGTCGTCACGATTGCGTCATCG
TATTACGGCAATTTGATTATTGGTGGTGTGATCGGTGATTATCTAGGGGC
GACCATTCAGATATGTGAGTTGCTGATCTACCTTCTTCTAAGCGCGGACA
TGAAGGCTGCACAGGCCAATCCGAGTCCGCTGGTAGTGCTGCTGGGCATG
GCCTTGCTGCCCATTTTGACTTCACGGCCCTTGATTGATTTTACGATGGT
TGACCAGTGCTGA
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protein sequence of NO10G02610.1

>NO10G02610.1-protein ID=NO10G02610.1-protein|Name=NO10G02610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp
MAPNKRGGPLTRSSTASSGTKSLNLNDHSQSVISKQEIEDRGAGTSEDTD
TYLDMPFLRGEKRVFFTAVIFLTRLHTPRWCEADHHPAYLMRSMMHFPFL
GLIIGIWAAVWLEAAAVLWSPYIAAAVSTMAAVWITGAFHEDGLADSLDA
FGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLECLLPVTDAGMV
TQVSFLPFLTLSPASVALLVAHTVSRWTVLPLIYFCHYVQDEQSAKRGLY
NWFADSQKLLTLPRLFAGTLVSIAVPLVLLPLEQALHVYLVVLVVTIASS
YYGNLIIGGVIGDYLGATIQICELLIYLLLSADMKAAQANPSPLVVLLGM
ALLPILTSRPLIDFTMVDQC*
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Synonyms
Publications