NO10G02440, NO10G02440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02440 vs. NCBI_GenBank
Match: EWM25431.1 (protein of unknown function DUF4149 [Nannochloropsis gaditana]) HSP 1 Score: 329.7 bits (844), Expect = 8.800e-87 Identity = 176/266 (66.17%), Postives = 210/266 (78.95%), Query Frame = 0 Query: 16 MKTLCTTVLLLTIAAELLPSSKAFKFPVGARLMGMPSSLRLTSARRTPSTTTLPSFFPKTKALHASDAAVAPSDDAGIGQVWIEPAFHNKLSVRILAVLAGVGFAMKSSGVVVPKLAATYVHLMMYGAGFGSLMYTTFVLGLVMFKNLPRQTFGRLQSKLFPIYFAWSSFTLAMQLLTGSVMGLPVKAMQWLGASLATSLINSLFLEPAATKVMFERYALERQNKKEAPEYKDLAKKFNGLHGMSSLVNLVAVVGGFVHAYYLALL 282 MK C+ +LL++ AA LLP +AFK P+GARL SS L PS+ + ++ L ASDA A D AG+ Q WIEPAFHNKLSVRILAVLAG+ AMK+SG+ +PK AATY+HL+M+GA FGS+MYTTFVLGLVM K+LPRQTFGRLQSKLFPIYFAWS+ LA+QLLTG +GLP KAM+WL ASLA +LINSLFLEPA+TKVMF+RYALE+QN++E EYK+LAK+F LHG SSLVNLV VVGGFVHAYYL+L+ Sbjct: 1 MKKPCSVLLLVSTAALLLPLHEAFKIPIGARLARTSSSSTLKRWPVPPSSNLVQGAGVVSQVLRASDAKGAEGDSAGV-QPWIEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTLGLPAKAMRWLAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLM 265
BLAST of NO10G02440 vs. NCBI_GenBank
Match: CEM08876.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 169.5 bits (428), Expect = 1.500e-38 Identity = 94/188 (50.00%), Postives = 124/188 (65.96%), Query Frame = 0 Query: 95 QVWIEPAFHNKLSVRILAVLAGVGFAMKSSGVVVPKLAATYVHLMMYGAGFGSLMYTTFVLGLVMFKNLPRQTFGRLQSKLFPIYFAWSSFTLAMQLLTGSVMGLPVKAMQW-LGASLATSLINSLFLEPAATKVMFERYALERQNKKEAPEYKDLAKKFNGLHGMSSLVNLVAVVGGFVHAYYLALL 282 QVW+ PA HN+ SVR+LA+L+ + A S V V K +VHL+ Y GS++YTTFV G+ MF+NLPR+TFGRLQSKLFP+YF + L + L TG LP +AM L +L +L N LEP +T++MF+RY +E Q +K+ PEYK LAK F HG+SSL NL+A+ GG H + LA L Sbjct: 103 QVWVAPAVHNRNSVRLLALLSTLLLA-SGSTVFVSKQLTLFVHLLAYATWLGSVIYTTFVAGITMFRNLPRKTFGRLQSKLFPLYFQLCTGMLIVLLTTGGASVLPNRAMMANLAVALVMTLANLFVLEPKSTEIMFKRYEMEDQGRKDDPEYKALAKGFGKFHGLSSLTNLIALCGGVAHGWTLASL 289
BLAST of NO10G02440 vs. NCBI_GenBank
Match: XP_002184056.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44234.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 167.9 bits (424), Expect = 4.400e-38 Identity = 97/210 (46.19%), Postives = 129/210 (61.43%), Query Frame = 0 Query: 76 KALHASDAAVAPSDDAGIGQVWIEPAFHNKLSVRILAVLAGVGFA-MKSSGVVVPKLAATYVHLMMYGAGFGSLMYTTFVLGLVMFKNLPRQTFGRLQSKLFPIYFAWSSFTLAMQLLTGSVMGL-PVKAMQWLGASLATSLINSLFLEPAATKVMFERYALERQNKKEAPEYKDLAKKFNGLHGMSSLVNLVAVVGGFVHAYYLALLFV 284 K ++ AA AP D + W + HN + R LA+L V A KSS +P A +H++ + FG++ YTTFVLG+ MFKNLPRQTFG+LQ+KLFP YFA SS L +QL T M + K+M LG +LA + +N +LEP +T M ERY+LE + +KE+ EYK L +F HGMSSL NLVA+ GG HA Y+A + Sbjct: 42 KTASSATAASAPVDT----EEWTKKRLHNTAAFRSLAILGAVAVAGTKSSAQFLPAQATASIHVLSFATWFGTVAYTTFVLGITMFKNLPRQTFGKLQAKLFPTYFALSSVALVLQLATAKAMPVFASKSMTALGVALAMTALNQFYLEPVSTINMMERYSLESRGEKESNEYKRLKAQFGKFHGMSSLTNLVALCGGVAHAIYMAAALI 247
BLAST of NO10G02440 vs. NCBI_GenBank
Match: GAX25969.1 (hypothetical protein FisN_4Hh547 [Fistulifera solaris]) HSP 1 Score: 156.8 bits (395), Expect = 1.000e-34 Identity = 92/207 (44.44%), Postives = 126/207 (60.87%), Query Frame = 0 Query: 85 VAPSDDAGIGQVWIEPAFHNKLSVRILAVLAGV---GFAMKSSGVVVPKLAATYVHLMMYGAGFGSLMYTTFVLGLVMFKNLPRQTFGRLQSKLFPIYFAWSSFTLAMQLLT-GSVMGLPVKA----MQWLGASLATSLINSLFLEPAATKVMFERYALERQNKKEAPEYKDLAKKFNGLHGMSSLVNLVAVVGGFVHAYYLALLFV 284 ++P A + W +P HN + R +A+L+ + GF+ KS ++P VH + + FG++ YTTFV G+ MFKNLPRQTFG+LQ+KLFP YFA SSFTLA+QL+T S+ + KA + LG +L +LIN FLEP +T M ERY LE + ++E+ YK L F HGMSSL NL+ + G HA YL+ V Sbjct: 27 LSPRMSAVSSEEWTKPRLHNTATFRTIALLSALLAAGFSSKSPLKLLPAQVLGSVHTISFATWFGTVAYTTFVAGITMFKNLPRQTFGKLQAKLFPKYFALSSFTLALQLITLKSLKAMTGKAAHSSAKALGVALLMTLINQFFLEPKSTSNMMERYELEDKGEQESDRYKTLKANFGKFHGMSSLTNLIGLCAGVAHAVYLSATLV 233
BLAST of NO10G02440 vs. NCBI_GenBank
Match: GAX24412.1 (hypothetical protein FisN_4Lh547 [Fistulifera solaris]) HSP 1 Score: 155.6 bits (392), Expect = 2.300e-34 Identity = 90/207 (43.48%), Postives = 127/207 (61.35%), Query Frame = 0 Query: 85 VAPSDDAGIGQVWIEPAFHNKLSVRILAVLAGV---GFAMKSSGVVVPKLAATYVHLMMYGAGFGSLMYTTFVLGLVMFKNLPRQTFGRLQSKLFPIYFAWSSFTLAMQLLT-GSVMGLPVKA----MQWLGASLATSLINSLFLEPAATKVMFERYALERQNKKEAPEYKDLAKKFNGLHGMSSLVNLVAVVGGFVHAYYLALLFV 284 + P+ A + W +P HN + R +A+L+ + GF+ KS ++P +H + + FG++ YTTFV G+ MFKNLPRQTFG+LQ+KLFP YFA SSFTLA+QL+T S+ + KA + LG +L +LIN +LEP +T M ERY LE + ++E+ YK L F HGMSSL NL+ + G VHA +L+ V Sbjct: 8 LTPTMSAVSSEEWTKPRLHNTATFRTIALLSALLAAGFSSKSPLKLLPAQVLGSIHTISFATWFGTVAYTTFVAGITMFKNLPRQTFGKLQAKLFPKYFALSSFTLALQLITLKSLKAMTGKAAHSSAKALGVALLMTLINQFYLEPKSTSNMMERYELEDKGEQESDRYKTLKASFGKFHGMSSLTNLIGLCAGVVHAVFLSATLV 214
BLAST of NO10G02440 vs. NCBI_GenBank
Match: CBN73833.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 151.8 bits (382), Expect = 3.300e-33 Identity = 87/191 (45.55%), Postives = 122/191 (63.87%), Query Frame = 0 Query: 90 DAGIGQVWIEPAFHNKLSVRILAVLAGVGFAMKSSGVVVPKLAATYVHLMMYGAGFGSLMYTTFVLGLVMFKNLPRQTFGRLQSKLFPIYFAWSSFT-LAMQLLTGSVMGLPVKAMQWLGASLATSLINSLFLEPAATKVMFERYALERQNKKEAPEYKDLAKKFNGLHGMSSLVNLVAVVGGFVHAYYLA 280 D Q +I+PA HNK VR+ A+L G A K + ++VP A VH++ A GS ++TTF G+ M +NLPRQTFG+LQSKLFP+YF ++ + LA+ ++ G L +A L SL ++L+N + LEP +T +M ERY LE KK++ EYK+L K F HGMSS NL A++G FV+A+ LA Sbjct: 61 DPSAQQAFIQPAIHNKNPVRVAAILTAAGLASKGA-MLVPGNLAKMVHMVALNAWMGSTLWTTFFAGITMMRNLPRQTFGKLQSKLFPLYFQFNFVSILAIYIIRG--CPLRTRAGVTLLVSLFSTLLNLVLLEPKSTSIMLERYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELA 248
BLAST of NO10G02440 vs. NCBI_GenBank
Match: PRW60938.1 (Transmembrane 205 [Chlorella sorokiniana]) HSP 1 Score: 149.4 bits (376), Expect = 1.600e-32 Identity = 102/259 (39.38%), Postives = 147/259 (56.76%), Query Frame = 0 Query: 24 LLLTIAAELLPSSK-AFKFPVGARLMGMPSSLRLTSARRTPSTTTLPSFFPKTKALHASDAAVAPSDDAGIGQVWIEPAFHNKLSVRILAVLAGVGFAMKSSGVVVPKLAATYVHLMMYGAGFGSLMYTTFVLGLVMFKNLPRQTFGRLQSKLFPIYFAWSSFTLAMQL--LTGSVMGLPVKAMQWLGASLATSLINSLFLEPAATKVMFERYALERQNKKEAPEYKDLAKKFNGLHGMSSLVNLVAVVGGFVHAYYLA 280 +L T A L+ SS+ A + P L + + LR S+ R + + P + H A+ +DD G + +P+ NK R+ AV A V A + + +P A +VHL+ Y G++++TTFV G+VMFKNLPRQ FGR+QSKLFPIYF SS A+QL L +P K + LG LA+SL++ L +EP T++MF+RY LE +++ K LAK+F HG+SSL+NL +V H Y+LA Sbjct: 1 MLATTARPLVLSSQAAARHPSSPALKSLSTPLRSMSSSRAATRRRSATASPTS---HRVSASATVNDDVQ-GAMLDKPSVANKNWARVAAVAATVAAASRGTS-YLPATGAAFVHLLAYSTWLGAIVWTTFVAGIVMFKNLPRQMFGRVQSKLFPIYFGLSSACSAVQLGVLLFGAAAVPQKQLVLLGLGLASSLLSFLVVEPLCTRIMFQRYDLENAAERDEGTIKALAKQFGKWHGISSLINLATLVVAVGHGYWLA 254
BLAST of NO10G02440 vs. NCBI_GenBank
Match: XP_002287805.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED95248.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 138.3 bits (347), Expect = 3.800e-29 Identity = 74/146 (50.68%), Postives = 100/146 (68.49%), Query Frame = 0 Query: 136 VHLMMYGAGFGSLMYTTFVLGLVMFKNLPRQTFGRLQSKLFPIYFAWSSFTLAMQLLTGSVMG--LPVKAMQWLGASLATSLINSLFLEPAATKVMFERYALERQNKKEAPEYKDLAKKFNGLHGMSSLVNLVAVVGGFVHAYYLA 280 +HL+ + FG+++YTTFV G+ MFKNLPR+ FG LQSKLFP+YF + + +Q+LT + M L + LG S A +L+N L+LEP +T+VMF+RY LE K+++ EY LAK F HGMSSL NLVA++GG VH LA Sbjct: 2 LHLLSFSTWFGTVVYTTFVAGITMFKNLPRRVFGSLQSKLFPLYFQLCTSMIGIQILTLTSMPDILSKVSEVSLGISFAATLLNLLYLEPTSTQVMFDRYDLEDDGKRDSDEYGKLAKSFGAYHGMSSLANLVALIGGIVHGVRLA 147
BLAST of NO10G02440 vs. NCBI_GenBank
Match: PSC74334.1 (Transmembrane 205 [Micractinium conductrix]) HSP 1 Score: 136.0 bits (341), Expect = 1.900e-28 Identity = 82/185 (44.32%), Postives = 114/185 (61.62%), Query Frame = 0 Query: 100 PAFHNKLSVRILAVLAGVGFAMKSSGVVVPKLAATYVHLMMYGAGFGSLMYTTFVLGLVMFKNLPRQTFGRLQSKLFPIYFAWSSFTLAMQL--LTGSVMGLPVKAMQWLGASLATSLINSLFLEPAATKVMFERYALER-QNKKEAPEYKDLAKKFNGLHGMSSLVNLVAVVGGFVHAYYLALL 282 P+ NK VR+LAV A V A + + +P +VHL+ YG+ G++++TTF+ G+VMFKNLPRQ FGR+QSKLFP+YF S+ +QL L + P K LG LA+SL+N L +EP T+VMF+RY LE ++ K L K+F HG+SSL+NL +V H ++LA L Sbjct: 74 PSAANKNIVRLLAVSAVVAAAARGT-AYLPTAGIAFVHLLAYGSWLGAIVWTTFIAGIVMFKNLPRQMFGRVQSKLFPLYFGLSAAASTIQLGVLAFAAANAPQKQFVLLGIGLASSLLNLLIVEPQCTRVMFQRYDLENASGPRDEGAIKALQKQFGKWHGISSLINLATLVVAVGHGWWLASL 257
BLAST of NO10G02440 vs. NCBI_GenBank
Match: XP_005845520.1 (hypothetical protein CHLNCDRAFT_136618 [Chlorella variabilis] >EFN53418.1 hypothetical protein CHLNCDRAFT_136618 [Chlorella variabilis]) HSP 1 Score: 130.6 bits (327), Expect = 7.900e-27 Identity = 79/191 (41.36%), Postives = 114/191 (59.69%), Query Frame = 0 Query: 92 GIGQVWIEPAFHNKLSVRILAVLAGVGFAMKSSGVVVPKLAATYVHLMMYGAGFGSLMYTTFVLGLVMFKNLPRQTFGRLQSKLFPIYFAWSSFTLAMQL--LTGSVMGLPVKAMQWLGASLATSLINSLFLEPAATKVMFERYALE-RQNKKEAPEYKDLAKKFNGLHGMSSLVNLVAVVGGFVHAYYLA 280 G+ +EP+ NK VR+L + A V A + + +P +VHL+ YG GSL++T+FV G+ M ++LPRQTFGRLQ++LFP YFA S+ A+QL L + P K + +G LATSL++ L +EP TKVMF+RY LE ++ L K F HG+SSL+NL ++ H ++LA Sbjct: 30 GVQGEMLEPSTSNKRWVRLLVLSATVAAAARGT-AYLPTAGVAFVHLLAYGIWLGSLVWTSFVAGITMIRHLPRQTFGRLQARLFPKYFALSAACTAIQLGVLLFAAAAPPAKQLVLVGLGLATSLLSLLVVEPITTKVMFQRYELESAAGPRDEAAITALKKSFGNWHGISSLINLGTLITAIGHGWWLA 219 The following BLAST results are available for this feature:
BLAST of NO10G02440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02440 ID=NO10G02440|Name=NO10G02440|organism=Nannochloropsis oceanica|type=gene|length=1071bpback to top protein sequence of NO10G02440.1 >NO10G02440.1-protein ID=NO10G02440.1-protein|Name=NO10G02440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=284bpback to top Synonyms
Publications
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