NO10G02400, NO10G02400 (gene) Nannochloropsis oceanica

Overview
NameNO10G02400
Unique NameNO10G02400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2625
Alignment locationchr10:654320..656944 -

Link to JBrowse

Properties
Property NameValue
DescriptionCathepsin a
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:654320..656944 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004185serine-type carboxypeptidase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR001563Peptidase_S10
Homology
BLAST of NO10G02400 vs. NCBI_GenBank
Match: EWM25409.1 (cathepsin a [Nannochloropsis gaditana])

HSP 1 Score: 787.7 bits (2033), Expect = 2.300e-224
Identity = 366/488 (75.00%), Postives = 402/488 (82.38%), Query Frame = 0
Query:   11 LLVLLACTVAAKA----EYTQAALEDEILDLPGLNYAPKFRHFSGYVVIPGIRPNATKHVHYHFIESEQDPTKDPVVWWTNGGPGCSGLLALFTEMGPFKPNLEGVLLENAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELGDHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVREQSKPDVSPKLNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWEEQCADFVVAPQYLFGNCLEIEAKMNMEMADLNPYALSYPVCLDESPIASLVKHGRAQRTWLLHHTTPPEAKAKMKNELGEGVGIIDIDGYEPCEDNYLVSYLNQPAVKEALHVDSSIVWTECSSIIKYDLFAFFVPMEPLYKYLINGKYNLKMLVYSGDDDSVCGTWGTQKWMYGLGQKAVTNWVPWRDDAGQVAGFVTQFRGNLTMATVAGAGHEVPSYTPATALKLFRLYLDNSWFDPAAFRP 495
            LL + A T    A     Y QAAL+DEI DLPGL Y P FRHFSGY+ IPGI PNATKHVHYHFIESE  P KDPVVWWTNGGPGCSGLL LFTE GPFKPN EG+L +NAYRWN+VANMLFVEQPVGVGFS+S DP  DYELGD QAAKDNY FIL FF KFPQYL N+FVISSESWGGHYIPTL+V IVR+Q +P  SPKLNFVGFLVGNP+TSW+NN QATVKALVGHSLVSYPTAAAWE QCA   +AP+YL  +C+E+EA+MN+EMA++NPYALSYPVCLD  P A L K GRAQRTWLLHH +PPE + +M      GVGIIDI  YEPCEDNYLV YLNQ AVK A+HVD  I W ECSS++ YDL  FF PMEPLYK L+ GKY LKMLVYSGDDDSVCGTWGTQKWM+GLGQ+ +  WVPWRDD GQVAGFVTQF GNLT+ATVAGAGHEVP+YTP TALKLF L+LD +WFDP AF P
Sbjct:    8 LLTVFALTSGVNAGRNVNYLQAALDDEITDLPGLEYMPAFRHFSGYIDIPGIAPNATKHVHYHFIESESAPEKDPVVWWTNGGPGCSGLLGLFTEQGPFKPNAEGILEQNAYRWNKVANMLFVEQPVGVGFSFSDDPMHDYELGDRQAAKDNYEFILGFFHKFPQYLSNEFVISSESWGGHYIPTLSVEIVRQQGRPGASPKLNFVGFLVGNPYTSWMNNHQATVKALVGHSLVSYPTAAAWERQCAHIRIAPEYLLTDCIELEARMNVEMAEVNPYALSYPVCLDTVPNARLSKRGRAQRTWLLHHASPPEVRERMAQ---VGVGIIDIADYEPCEDNYLVKYLNQEAVKVAMHVDPGIEWKECSSLLNYDLRDFFAPMEPLYKLLLGGKYGLKMLVYSGDDDSVCGTWGTQKWMHGLGQRVLRAWVPWRDDEGQVAGFVTQFGGNLTLATVAGAGHEVPTYTPDTALKLFMLFLDGTWFDPKAFSP 492          
BLAST of NO10G02400 vs. NCBI_GenBank
Match: EWM28677.1 (Peptidase S10, serine carboxypeptidase [Nannochloropsis gaditana])

HSP 1 Score: 366.3 bits (939), Expect = 1.600e-97
Identity = 202/491 (41.14%), Postives = 278/491 (56.62%), Query Frame = 0
Query:   23 AEYTQAALEDEILDLPGLNYAPKFRHFSGYVVIPGIRPNATKHVHYHFIESEQDPTKDPVVWWTNGGPGCSGLLALFTEMGPFKPNLEGVLLE-NAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELGDHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVREQSKPDVSPKLNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWEEQCADFVVAPQYLFGN-CLEIEAKMNMEMADLNPYALSYPVCLD-----ESP----------IASLVKHGRAQRTWLLHHTTPP--EAKAKMKNELGEGVGIIDIDGYEPCEDNYLVSYLNQPAVKEALHVDSSIVWTECSSIIKY-----DLFAFFVPMEPLYKYLINGKYNLKMLVYSGDDDSVCGTWGTQKWMYGLGQKAVTN--WVPWRDDAGQVAGFVTQFRGNLTMATVAGAGHEVPSYTPATALKLFRLYL-DNSW 487
            A YT+ AL DE+LDLPGL     FR F+GY+ + G +    K++ Y ++E+E+ P + P+V+WTNGGPGCSGL    TEMGPF+P  +G  L  N Y W++VANMLFVEQPV VGFSY+ +P  D   GD QAA+DN+  I AF  +FP     +  +S ES+ GHY+P LA  IV     P+    +N  GF+VGNP T  V N    + +  GHSL+     + W  +C      P+ LFG+ C++++++M   +  LNPYAL YPVC D      SP            +++  GR QR  LL  T P      A ++ E     G      YEPC+D +  +YLN+  V++A+H      W +CS+ + Y     D  AF   ++  Y YL      L++L++SG DDSVC T GT  W+  +     +N  W  W  D GQVAGF+  ++  +T+ATV GAGHEVP+Y P  +L LF  YL DN W
Sbjct:  116 ASYTKEALADEVLDLPGLTEKVTFRQFAGYLNLKGTQ----KNIFYWYVEAEESPDEAPLVFWTNGGPGCSGLFGFMTEMGPFRPTQDGKALHLNPYSWSRVANMLFVEQPVTVGFSYTNNP-KDLAFGDKQAAEDNFQVIQAFLRRFPHMRERELHLSGESYAGHYLPQLAQYIV---DHPEKDAPINLKGFMVGNPLTDPVENTIGAIDSFWGHSLLPRELYSEWSSRCRSQSNNPEVLFGDRCMQLQSQMWFFVQGLNPYALDYPVCTDATSGFSSPGQRGAPFPPSKETILAQGRNQRYHLLSLTMPAFIGGPAGLERESMSRNGA--TPQYEPCQDAFSTAYLNRKDVQKAIHAKEGTRWADCSTTVSYNFNRNDRLAF---VQDTYTYLTKRDLGLRILIFSGADDSVCATQGTLFWVQNMKWPIESNQDWTSWGVD-GQVAGFLQGYQNGVTIATVMGAGHEVPAYKPVESLALFEAYLKDNIW 592          
BLAST of NO10G02400 vs. NCBI_GenBank
Match: CBJ28348.1 (Serine Carboxypeptidase-like [Ectocarpus siliculosus])

HSP 1 Score: 350.1 bits (897), Expect = 1.200e-92
Identity = 199/472 (42.16%), Postives = 271/472 (57.42%), Query Frame = 0
Query:   49 FSGYVVIPGIRPNATKHVHYHFIESEQDPTKDPVVWWTNGGPGCSGLLALFTEMGPFKPNLEG-VLLENAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELGDHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVREQSKPDV---SPKLNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWEEQCADFVVAPQYLFG-----NCLEIEAKMNMEMADLNPYALSYPVCLDESPIASLVKHGRAQRTWLLHHTTPPEAKAKMKNELGEGVG-----IIDIDGYEPCEDNYLVSYLNQPAVKEALHVDSSIVWTECSSIIKYDLFAFFVPMEPLYKYLINGKYNLKMLVYSGDDDSVCGTWGTQKWMYGLGQKAVTN--WVPWRDDAGQVAGFVTQFRG-NLTMATVAGAGHEVPSYTPATALKLFRLYLDNSWFDPAAFRPWSDGGEKEV 504
            FSGY+    +     +++ Y F+E++++    PV+ WTNGGPGCSG+L L TE GPF+    G  L++N Y WN+VANML+VE P GVGFSYS D  TDY+ GD + A DNY  +  + ++FPQY  NDF ISSES+GGHY+P LA  I++   K  V   +P + F GFLVGNP+T   +N+ A      G  L+       W + C D      YL G      C  +E  M+  + ++NPYAL YP+C  ES   + V H  AQR  +  H      + +   E    VG     +     YEPC ++Y + YLN+P V++AL V    VW +CS+ ++Y       PM P YK L+N  Y++ +LV+SGDDD+VC T GTQ W+Y LG     +  W  W ++ GQVAG+ T+F+G  L+  TV  AGHEVP+Y PA AL L R YLD SW+          GG+ EV
Sbjct:    2 FSGYI---NVDAENGRNIFYWFMEAQENTEDAPVILWTNGGPGCSGMLGLLTEHGPFQVRDGGKTLVDNDYSWNKVANMLYVEIPSGVGFSYS-DTVTDYQTGDDKTAVDNYWLVQGWLDRFPQYRSNDFHISSESYGGHYMPQLAEEILKRNEKVKVDGSAPVIKFSGFLVGNPYTDARSNQVAQYAKYWGDQLLPKFVYDDWRKMCVD--EDGGYLSGASRSDACEGLEETMDGYIGNVNPYALDYPMCTGES--GTTVAH--AQRLAMRDHHLVAWMQQRQTEEAEGRVGYTRPVVERAAPYEPCAEDYTIPYLNRPDVQQALRVREGTVWEQCSTQVQYKTSHMLRPMMPYYKRLLN-DYDVSVLVFSGDDDAVCATEGTQWWIYDLGYAVDKDCTWKTW-EEGGQVAGYHTRFQGAKLSFVTVHYAGHEVPAYQPARALMLLRRYLDGSWW----------GGDAEV 451          
BLAST of NO10G02400 vs. NCBI_GenBank
Match: XP_002186362.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65832.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 348.2 bits (892), Expect = 4.600e-92
Identity = 192/474 (40.51%), Postives = 266/474 (56.12%), Query Frame = 0
Query:   21 AKAEYTQAALEDEILDLPGLNYAPKFRHFSGYVVIPGIRPNATKHVHYHFIESEQDPTKDPVVWWTNGGPGCSGLLALFTEMGPFKPNLEGVLLENAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELGDHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVREQSKPDVSPKLNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWEEQCADFVVAPQYLFGNCLEIEAKMNMEMA-DLNPYALSYPVCLDESPIASLVKHGRAQRTWLLHHTTPPEAKAKMKNELGEGVGIIDIDGYEPCEDNYLVSYLNQPAVKEALHV-DSSIVWTECSSIIKYDLFAFFVPMEPLYKYLIN----GKYNLKMLVYSGDDDSVCGTWGTQKWMYGLGQKAVTNWVPWRDDAGQVAGFVTQF------RGNLTMATVAGAGHEVPSYTPATALKLFRLYL 483
            A  E T +A +D I  LPGL+Y P F  FSGY+ +     +AT+H+ Y ++ES+ DP  DPVV WTNGGPGCSGLL +  E GPF  +  G L +N Y WN+VANM++ EQP GVGFSY  D   DY  GD QAA DNY FI+ F +++P+   NDF +SSES+GGHYIP + + I+R     D+   +NF GFL+GNP+   ++N     +A   H L++ P    W ++C D   +  ++   C +I   M  +    +NPYAL YPVC          K   A+ + L    + P                     ++PC   +L +YL++  V++ALHV  S+  W  C   ++Y      +P   LY+ LI+    GK++L ML+YSGDDDS+C T GTQ W++ L + A + W  W+    Q +GFVT F          T  TV GAGHEVPSY P  AL++FR +L
Sbjct:   40 AVQERTASAEDDRITMLPGLDYDPGFEQFSGYLDV-----SATRHIFYWYMESQSDPANDPVVLWTNGGPGCSGLLGMGAEHGPFYISKSGRLHDNPYSWNKVANMIYFEQPAGVGFSY-CDAAEDYITGDEQAAADNYNFIVEFLQRYPERQTNDFYVSSESYGGHYIPQMTLEILRR----DIDHFVNFKGFLLGNPYVDPLSNMVTQFEAYYSHGLIAKPLFDDWSKKCKD---SNYWMSRECDQITTNMFKQFGHGINPYALDYPVC----------KKDAAEYSHLERPVSNP--------------------AFKPCSQEFLENYLDREEVRDALHVAPSAKPWDVCGG-VRYSKSDVDIPTIGLYQELIDQAKAGKHDLNMLIYSGDDDSICSTAGTQYWLWDLAE-ASSIWKAWQAQE-QTSGFVTTFDLGDKTNATFTFVTVHGAGHEVPSYRPVEALEMFRRFL 467          
BLAST of NO10G02400 vs. NCBI_GenBank
Match: EWM28739.1 (serine carboxypeptidase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 321.2 bits (822), Expect = 6.000e-84
Identity = 194/520 (37.31%), Postives = 267/520 (51.35%), Query Frame = 0
Query:   25 YTQAALEDEILDLPGL-NYAPKFRHFSGYVVIPGIRPNATKHVHYHFIE-----SEQDPTKDPVVWWTNGGPGCSGLLALFTEMGPFKPNLEGVLLE-NAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELGDHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVRE---------------------QSKPDV------SPK-----LNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWEEQC-ADFVVAPQYLFGN-CLEIEAKMNMEMAD-LNPYALSYPVCLDESPIASLVKHGRAQRTWLLHHTTPPEAKAKMKNELGEGVGII----------------DIDG--YEPCEDNYLVSYLNQPAVKEALHVDSSIVWTECSSIIKYDLFAFFVPMEPLYKYLI--NGKYNLKMLVYSGDDDSVCGTWGTQKWMYGLGQKAVTNWVPWRDDAGQVAGFVTQFRGNLTMATVAGAGHEVPSYTPATALKLFRLYL 483
            YT AAL DEI+ LPGL      FR F+GY+ I     + TKH+ Y ++E     S  D    P+  WTNGGPGCSGL   F E GPF+    G  LE N + WN +++ML+VE PVGVGFSYS D  T+Y +GD Q A+DN   +  FF +FP    +D  ++SES+GGHYIPTLA  I+R                      QS P V      SP      +N  G  +GNPFT  V N    + AL GH ++       W   C A    A    +   C +++ +M  E+   ++PYAL +P+C D+         G  QR  LL H          + + GE                     D +G  ++PCED+YL +YLN+  VK  +H    I W +C++ ++Y+     V MEP+Y+YL+  N    L++L+YSGDDDSVCG  GT+ W+  +G K    W  W     +VAG++  +   L  +TV GAGHEVP++TP  A +LF  +L
Sbjct:  106 YTAAALADEIVALPGLPEPDSSFRQFAGYLDI-----SPTKHIFYWYVEPNRNSSVLDWAAVPLSLWTNGGPGCSGLFGYFAEHGPFRATQHGSGLEVNPFSWNTLSHMLYVEIPVGVGFSYSED-ETEYYIGDEQTARDNLLVLQTFFARFPHLRSSDLYLTSESYGGHYIPTLAREIIRNNRKRADSLAASETGAVGKTRGQSTPQVVRLDRISPASDDQYINLRGLAIGNPFTDPVENVVGMIDALDGHDVIPESLFERWLTTCRAQGAAAADVFYSRPCQDLQKEMWREVGQGVDPYALDWPLCADDRK-----SRGGKQRKALLQHLWRLHTSETFRADRGESSSSSLASTAQAVLKQAPWGQDKEGLPFQPCEDDYLSAYLNRADVKRIIHAKERINWEDCTNCVRYEAHDQDVYMEPVYRYLMDENKDAGLRVLLYSGDDDSVCGPRGTEMWLRTMGWKVTEPWRAWTVKE-EVAGYMKTYENGLVFSTVLGAGHEVPAFTPEAAWELFGAFL 613          
BLAST of NO10G02400 vs. NCBI_GenBank
Match: XP_005828885.1 (hypothetical protein GUITHDRAFT_95862 [Guillardia theta CCMP2712] >EKX41905.1 hypothetical protein GUITHDRAFT_95862 [Guillardia theta CCMP2712])

HSP 1 Score: 315.8 bits (808), Expect = 2.500e-82
Identity = 187/474 (39.45%), Postives = 251/474 (52.95%), Query Frame = 0
Query:   23 AEYTQAALEDEILDLPGL-NYAPKFRHFSGYVVIPGIRPNATKHVHYHFIESEQDPTKDPVVWWTNGGPGCSGLLALFTEMGPFKPNLEGVLLENAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELGDHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVREQSKPDVSPKLNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWEEQCADFVVAPQYLF-----GNCLEIEAKMNMEMADLNPYALSYPVCLDESPIASLVKHGRAQRTWLLHHTTPPEAKAKMKNELGEGVGIIDIDGYEPCEDNYLVSYLNQPAVKEALHVDS--SIVWTECSSIIK--YDLFAFFVPMEPLYKYLINGKYNLKMLVYSGDDDSVCGTWGTQKWMYGLGQKAVTNWVPWRDDAGQVAGFVTQFRGNLTMATVAGAGHEVPSYTPATALKLFRLYLDNSW 487
            AE       DEI DLPGL     KF+ ++GY+ + G      K + Y F+E++++P   P+V WTNGGPGCSGL    +E GPF+    G L  N Y WN+VANM+F+EQP GVGFS      T    GD +AAKDN AF+L F  ++P Y  ND  ++SES+GGHYIPTLA+ ++      D+    NF GF VGNP T           A     L+  P    W+     FV    +LF      +C  + A M        PYAL +P+C   S     +  GR +R  LL      + K + K   G          Y+PC D+Y+  YLN+  V++A+HV +  S+ W+ CS ++   Y+      PM  +Y  LI     LKM++YSGDDDS+C T G Q W++GLG K +  W  W    GQVAGF  +F G L   TV GAGH VPS  P  A  +F  +L++SW
Sbjct:   34 AEPLAPGATDEITDLPGLPKEVSKFKQYAGYIPVGG-----GKSLFYWFVEAQKNPASSPLVLWTNGGPGCSGLTGFLSEQGPFRAEKGGQLSLNKYSWNRVANMIFIEQPAGVGFSQGPSNMT---YGDAEAAKDNRAFVLGFLSRYPMYKDNDLYLTSESYGGHYIPTLAMLLL------DLP---NFKGFAVGNPLTWMPYRDYGQYAAYASRQLIPKP---LWDR----FVALGCFLFPSANQTDCDSMTASMXXXXXXXXPYALDFPICQTPS-----LASGRTERYLLLKKIASADKKQR-KTLSGY------FPKYKPCVDDYMTQYLNRKDVQKAIHVSNPGSVTWSVCSDVVNEAYNPKDVAAPMMGVYNELIK-HGGLKMMIYSGDDDSICSTAGAQMWIWGLG-KPIEEWQQW-SSKGQVAGFTVKFPG-LRFTTVHGAGHMVPSTRPMQAYDMFVKFLEDSW 467          
BLAST of NO10G02400 vs. NCBI_GenBank
Match: OLP81164.1 (Serine carboxypeptidase-like 39 [Symbiodinium microadriaticum])

HSP 1 Score: 303.5 bits (776), Expect = 1.300e-78
Identity = 188/495 (37.98%), Postives = 269/495 (54.34%), Query Frame = 0
Query:    2 PTLVIASRLLLVLLACTVAAKAEYTQAALEDEILDLPGLNYAP--KFRHFSGYVVIPGIRPNATKHVHYHFIESEQDPTKDPVVWWTNGGPGCSGLLALFTEMGPFKPNLE-GVLLENAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELGDHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVREQSKPDVSPKLNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWEEQCADFVVAPQYLFGNCLEIEAKMNMEMADLNPYALSYPVCLDESPIASLVKHGRAQRTWLLHHTTPPEAKAKMKNELGEGVGIIDIDGYEPCEDNYLVSYLNQPAVKEALHVDSSIVWTECSSIIKYDLFAFFVPMEPLYKYLI-NGKYNLKMLVYSGDDDSVCGTWGTQKWMYGLGQKAVT--NWVPWRDDAGQVAGFVTQF--------RGNLTMATVAGAGHEVPSYTPATALKLFRLYL 483
            P +  A+ +L   LA    A   Y  AAL+DEI  LPG   AP   FR FSGY+ +     N ++ + Y F+E++ + ++ PV+ WTNGGPGCSGL+    E GPF+   + G L+ N   WN++ANM+F+EQPVGVGFS +T+   D E GDHQA +D +AF+L FFE+FP+Y  +DF ISSES+GGHY+P LA +++ +   PD      F G  +GNP+T W  +    ++   GH L+  P  A +EE       A  +L   C    A++   + D + YAL +  C  E         G+ ++  LL   T  +               I+   Y PC      +YLN P V++A+H +  + WTEC++ I ++       M P +  LI NG   LK+++YSGDDDSVC T  TQ++++ LG   +T  NWVPW+   GQ AGF T F          +    TV GAGH VP+  P  +L L + +L
Sbjct:   78 PRMKAAAGILCHALATMAFA---YGPAALQDEITHLPG---APPVDFRMFSGYIDVSPSWANGSRQIFYWFVEAQSNASEAPVILWTNGGPGCSGLIGFLAEQGPFRVKPDGGSLMHNPQAWNKLANMVFIEQPVGVGFSTTTE---DIEYGDHQAVEDMHAFVLNFFERFPEYAGHDFYISSESYGGHYMPMLA-KLLLDNGMPD------FRGIFLGNPYTYWAYSAAGMIETAWGHQLLPAPLWAQYEESGCK---ATPWL-QKCSNTTAEIMSILQDFDMYALDFSTCTHE---------GQHEQRLLLRGLTQTQD--------------IEPPAYYPCATQVTRTYLNLPKVRKAIHAE-DVDWTECAN-ISWNQTEHSESMMPYWVDLIRNG--TLKIMIYSGDDDSVCSTSATQQFVWNLGYSPLTGRNWVPWK-VLGQTAGFRTDFDVPTQPGHSASFDFVTVHGAGHMVPATQPERSLALLQSFL 524          
BLAST of NO10G02400 vs. NCBI_GenBank
Match: CAJ73288.1 (cathepsin A [Guillardia theta])

HSP 1 Score: 303.1 bits (775), Expect = 1.700e-78
Identity = 182/460 (39.57%), Postives = 242/460 (52.61%), Query Frame = 0
Query:   23 AEYTQAALEDEILDLPGL-NYAPKFRHFSGYVVIPGIRPNATKHVHYHFIESEQDPTKDPVVWWTNGGPGCSGLLALFTEMGPFKPNLEGVLLENAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELGDHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVREQSKPDVSPKLNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWEEQCADFVVAPQYLF-----GNCLEIEAKMNMEMADLNPYALSYPVCLDESPIASLVKHGRAQRTWLLHHTTPPEAKAKMKNELGEGVGIIDIDGYEPCEDNYLVSYLNQPAVKEALHVDS--SIVWTECSSIIK--YDLFAFFVPMEPLYKYLINGKYNLKMLVYSGDDDSVCGTWGTQKWMYGLGQKAVTNWVPWRDDAGQVAGFVTQFRGNLTMATVAGAGHEVPSYTPA 473
            AE       DEI DLPGL     KF+ ++GY+ + G      K + Y F+E++++P   P+V WTNGGPGCSGL    +E GPF+    G L  N Y WN+VANM+F+EQP GVGFS      T    GD +AAKDN AF+L F  ++P Y  ND  ++SES+GGHYIPTLA+ ++      D+    NF GF VGNP T           A     L+  P    W+     FV    +LF      +C  + A M        PYAL +P+C   S     +  GR +R  LL      + K + K   G          Y+PC D+Y+  YLN+  V++A+HV +  S+ W+ CS ++   Y+      PM  +Y  LI     LKM++YSGDDDS+C T G Q W++GLG K +  W  W    GQVAGF  +F G L   TV GAGH VPS   A
Sbjct:   34 AEPLAPGATDEITDLPGLPKEVSKFKQYAGYIPVGG-----GKSLFYWFVEAQKNPASSPLVLWTNGGPGCSGLTGFLSEQGPFRAEKGGQLSLNKYSWNRVANMIFIEQPAGVGFSQGPSNMT---YGDAEAAKDNRAFVLGFLSRYPMYKDNDLYLTSESYGGHYIPTLAMLLL------DLP---NFKGFAVGNPLTWMPYRDYGQYAAYASRQLIPKP---LWDR----FVALGCFLFPSANQTDCDSMTASMXXXXXXXXPYALDFPICQTPS-----LASGRTERYLLLKKIASADKKQR-KTLSGY------FPKYKPCVDDYMTQYLNRKDVQKAIHVSNPGSVTWSVCSDVVNEAYNPKDVAAPMMGVYNELIK-HGGLKMMIYSGDDDSICSTAGAQMWIWGLG-KPIEEWQQW-SSKGQVAGFTVKFPG-LRFTTVHGAGHMVPSTAQA 453          
BLAST of NO10G02400 vs. NCBI_GenBank
Match: XP_002131445.1 (PREDICTED: serine carboxypeptidase 24 [Ciona intestinalis])

HSP 1 Score: 291.2 bits (744), Expect = 6.600e-75
Identity = 170/466 (36.48%), Postives = 235/466 (50.43%), Query Frame = 0
Query:   34 ILDLPGLNYAPKFRHFSGYVVIPGIRPNATKHVHYHFIESEQDPTKDPVVWWTNGGPGCSGLLALFTEMGPF--KPNLEGVLLENAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELGDHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVREQSKPDVSPKLNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWEEQCADFVVA---PQYLFGNCLEIEAKMNMEMADLNPYALSYPVCLDESP-------IASLVKHGRAQRTWLLHHTTPPEAKAKMKNELGEGVGIIDIDGYEPCEDNYLVSYLNQPAVKEALHVDSSIVWTECSSII--KYDLFAFFVPMEPLYKYLINGKYNLKMLVYSGDDDSVCGTWGTQKWMYGLGQKAVTNWVPWRDDAGQVAGFVTQFRGNLTMATVAGAGHEVPSYTPATALKLFRLYLDNS 486
            I  LPGL     F+ ++ YVV   +     + + Y FIES+ DP  DP+V W NGGPGCS    L  EMGPF   PN+   L  N Y WN++ANM+F+E P GVGFS S +   DY  GD Q A D+  F+L FF+ +P +  N+F I+ ES+ GHYIPTL  +IV   SK     K+N  G ++GNP T    N       +  H+L++  T    ++ C     +     Y    C +       EM  LNPY +   VCL           ++SL         +     +  EA A  + +LG          Y PC+D+Y   YLN P V+ A+H D +  WT+C+  I  KY    F   M P+YK  I  +  L +L+YSGD DSV     T++ +  LG K  + W  W D   Q+ G+  ++ G LT ATV  AGHEVPS+ P  A  +F  +L ++
Sbjct:   24 ITGLPGLESQVSFKQYADYVV---VNKTHDRRLFYWFIESQSDPQNDPLVLWLNGGPGCSSFGGLLGEMGPFYVLPNI--TLGTNKYSWNKIANMIFLESPAGVGFSKSNN-AQDYVTGDEQTASDSLEFLLNFFKSYPHFKDNEFWIAGESYAGHYIPTLTAKIVEHNSK-TAENKINLKGLMIGNPLTYLTINNGGVTDYVYSHNLIANETYQGLKKYCNYTFPSGSGTAYNKALCNQYSVAATTEMGPLNPYDIYVDVCLQGKSSKDAIALLSSLASSELPGSVFAKQRLSNLEAHAIEQGKLG--------SPYFPCQDSYTSKYLNDPLVQRAIHADPT-EWTDCNDFINQKYSKVDFAQSMLPIYKQSILNQ-GLNVLIYSGDVDSVVPATATRRCIQELGLKIKSKWQHWTDSKKQIGGYTEEYAG-LTYATVRNAGHEVPSFQPMRAYDMFSRFLKSN 471          
BLAST of NO10G02400 vs. NCBI_GenBank
Match: OLP96679.1 (Serine carboxypeptidase-like 39 [Symbiodinium microadriaticum])

HSP 1 Score: 290.4 bits (742), Expect = 1.100e-74
Identity = 177/484 (36.57%), Postives = 258/484 (53.31%), Query Frame = 0
Query:   13 VLLACTVAAKAEYTQAALEDEILDLPGLNYAPKFRHFSGYVVIPGIRPNATKHVHYHFIESEQDPTKDPVVWWTNGGPGCSGLLALFTEMGPFKPNLEGVLLE-NAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELGDHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVREQSKPDVSPKLNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWE-EQCADFVVAPQYLFGNCLEIEAKMNMEMADLNPYALSYPVCLDESPIASLVKHGRAQRTWLLHHTTPPEAKAKMKNELGEGVGIIDIDGYEPCEDNYLVSYLNQPAVKEALHVDSSIVWTECSSII--KYDLFAFFVPMEPLYKYLINGKYNLKMLVYSGDDDSVCGTWGTQKWMYGLGQKAV--TNWVPWRDDAGQVAGFVTQF--------RGNLTMATVAGAGHEVPSYTPATALKLFRLYL 483
            + LA  VAA   Y   AL+DEI DLPG   + +FR FSGY+ +          + Y F+ES++D    PV+ WTNGGPGCSGL    TE GPF+   +G  L  N   WN++ NM+F+EQPVGVGFS  TD    Y  GDHQAA+DN+ F+L FF+++P+Y  NDF ISSES+GGHY+PTL   +      P      +F G  +GNP T  +           GH L+  P    ++  +CA    A +     C ++ A+M+  ++  + YAL +P C           HG A            + + ++ +++ +  G +    Y+PC  +    YLN P V+ A+H   +  W +CS ++   Y+      PM P +++LI  K  L +++YSGDDD+VC T G+Q++++ LG   +   +WVPW     Q AGF T+F          + +  TV GAGH VP+  PA +L L R +L
Sbjct:    8 LFLAAEVAA---YGPEALQDEITDLPGAP-SVEFRMFSGYIDV------GEGQMFYWFVESQRDAAHAPVILWTNGGPGCSGLAGFLTEQGPFRVKADGKTLSMNHLAWNKIVNMVFIEQPVGVGFS-KTDKEIQY--GDHQAAEDNFKFVLGFFKRYPEYKGNDFYISSESYGGHYMPTLGKLLADRDDVP------SFRGIFLGNPLTYMMYRDYGQYGTAWGHQLLPGPLWMQYDAAKCATTFPASE----ACQKVTAEMDKILSGFDVYALGFPTC----------DHGTA---------AGQQERLQLMSQVNQAKGDLP-PPYQPCASDLGEKYLNLPEVQTAIHAQHT-EWGDCSRVVGRHYNSTDLNEPMMPYWQHLIQ-KGTLNLMIYSGDDDAVCATLGSQQFVWDLGYAPLEGKSWVPWTVQ-HQTAGFRTEFAVPSKAGASASFSFVTVHGAGHMVPATQPARSLALLRSFL 445          
The following BLAST results are available for this feature:
BLAST of NO10G02400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25409.12.300e-22475.00cathepsin a [Nannochloropsis gaditana][more]
EWM28677.11.600e-9741.14Peptidase S10, serine carboxypeptidase [Nannochlor... [more]
CBJ28348.11.200e-9242.16Serine Carboxypeptidase-like [Ectocarpus siliculos... [more]
XP_002186362.14.600e-9240.51predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EWM28739.16.000e-8437.31serine carboxypeptidase-like protein [Nannochlorop... [more]
XP_005828885.12.500e-8239.45hypothetical protein GUITHDRAFT_95862 [Guillardia ... [more]
OLP81164.11.300e-7837.98Serine carboxypeptidase-like 39 [Symbiodinium micr... [more]
CAJ73288.11.700e-7839.57cathepsin A [Guillardia theta][more]
XP_002131445.16.600e-7536.48PREDICTED: serine carboxypeptidase 24 [Ciona intes... [more]
OLP96679.11.100e-7436.57Serine carboxypeptidase-like 39 [Symbiodinium micr... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001108NSK001108Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G02400.1NO10G02400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585999gene_3973Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100005g13gene5046Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G02400.1NO10G02400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G02400 ID=NO10G02400|Name=NO10G02400|organism=Nannochloropsis oceanica|type=gene|length=2625bp
ACAGGCACATTCCAATCTCTTTCTACAACCCTGTTTCAAAAATCCCGCAC
GATGCCCACCTTAGTCATCGCCTCCCGCCTGCTTTTGGTGCTGCTGGCAT
GTACAGTCGCCGCCAAGGCTGAGTACACACAGGCAGCGCTCGAAGACGAG
ATATTGGATCTACCAGGATTGAACTATGCTCCTAAATTTCGCCATTTTTC
AGGCTACGTCGTCATTCCGGGCATTCGCCCAAACGCCACCAAGCACGTCC
ATTACCATTTTATTGAGTCCGAGCAAGACCCGACCAAGGATCCAGTTGTG
TGGTGGACAAATGGTGGACCGGGTTGCAGTGGTTTGCTGGCATTGTTTAC
TGAAATGGGGCCTTTCAAGCCTAATTTGGAGGGCGTGCTTTTGGAGAATG
CGTACCGGTGGAACCAAGTGGCCAACATGTTGTTTGTCGAGCAGCCGGgt
acgtagcgataagaaaggaggatgaagattgatgccgcccatcatgactt
tccttggggcactctttgtcacatttctgtgtcgttcttactccctccct
tgttttctttacgcagTCGGTGTAGGCTTTTCTTACAGCACCGATCCCAC
CACCGACTACGAGCTCGGCGACCACCAGGCAGCCAAGGATAATTACGCAT
TTATCCTGGCATTTTTCGAGAAGTTTCCCCAATATCTACCGAATGACTTT
GTCATCTCTTCTGAGgtagtttaaatgttgagttgtgagcataaaggagg
aagacgattttccatccatctgtctctaccaccgattcttttgactatgg
acatattgtgcgttgccgacatttgaccaccgaaacatccctccccttcc
cattatttacgtatgtacgcctattcccaaaaaagTCGTGGGGTGGACAC
TACATACCCACCCTAGCTGTGCGTATTGTCCGTGAGCAATCCAAGCCCGA
CGTTTCCCCCAAGCTCAATTTCGTGGGGTTTCTGGTCGGAAATCCTTTCA
CCAGCTGGGTGAACAATCGCCAGGCGACTGTCAAGGCGTTGGTCGGTCAT
TCTTTGGTGTCGTACCCGACGGCTGCTGCTTGGGAAGAGCAGTGTGCCGA
CTTCGTGGTGGCCCCGCAATATTTGTTTGGAAATTGCCTTGAGATCGAGG
CGAAAATGAATATGGAAATGGCGGATTTGAATCCTTACgtacgtacgctg
gagaacgggagggaggaggaaggaaagggggaaggaaagggggaaggaaa
gggaagtggagcatttagatattctacacagacacagacacagacaaaca
caacacacacacacacacacagacacacagacacagacacagacacacac
agacacacacagacacacacagacactcacagacacacacagacacacac
acacacacagacacacacagacacacacacacacacacacacacacacac
acacacacacacacacacacacacacacaaaatagGCACTCTCCTACCCT
GTCTGTCTTGACGAAAGCCCCATAGCCAGCCTCGTCAAGCATGGGCGGGC
TCAACGTACCTGGTTGCTGCATCATACCACACCCCCTGAGGCCAAGGCAA
AAATGAAGAATGAGCTGGGCGAGGGAGTAGGTATCATCGATATTGATGGG
TATGAGCCCTGTGAAGATAACTATTTGGTGTCGTATTTGAACCAACCGGC
GGTGAAGGAGGCTTTGCATGTGGATTCGTCCATTGTGTGGACAGAGTGCT
CGAGCATTATTAAATATGACTTGTTCGCCTTCTTTGTACCGATGGAGCCC
CTCTACAAGTACTTGATCAACGGGAAATATAACCTGAAAATGCTGGTGTA
TTCGGGTGATGATGACTCGGTTTGTGGCACATGGGGAACACAAAAGTGGA
TGTACGGTCTGGGGCAAAAGGCAGTGACAAATTGGGTGCCGTGGCGTGAT
GATGCAGGGCAGGTCGCCGGGTTTGTGACACAATTTAGGGGGAATCTAAC
TATGGCGACGGTCGCGGGAGCGGGGCATGgtaagtcttgcttttgagtga
gaatttgttatttttttgggtggagggttgttacgcttcgcattctgcgc
gctctctagtgacttgttgcctcggcctaccacgcatacactctaatatt
tttcctccgcgcacacacacacatatgtgtacacacgtacagAGGTCCCC
TCCTATACACCAGCCACGGCTCTGAAGCTCTTCAGACTGTACTTGGATAA
CTCTTGGTTCGATCCTGCGGCATTCCGGCCTTGGTCAGACGGAGGCGAGA
AGGAGGTTGGATCGGAGCAGCGGGAGCAGGATGAGCAGCAGCAGGGGCAG
GACGTTCAGCAGCAGGAGGAGAGGGAGCAGCAGCAGGAGCTGATCAAGGC
ATCTTTGCGTCGCCATGCGTGAGTGTAAAATGTAGATGACTTGTAACTGA
TTGAGAGAAGGCCCAAAAAACATTTTTGAAAAAAAAGGAGAGAAGAGTGG
TGGAGATTGCTTGATTAACAGCATGCCGACAGAACATAAGTAGAGTTTTT
AACATTCCATCTGGGAGGAAAAGGTTGAAGGAAAAAGAAGCAAAAAATGC
TCGTGCGAGCGCCAGTTGAAGGCAG
back to top

protein sequence of NO10G02400.1

>NO10G02400.1-protein ID=NO10G02400.1-protein|Name=NO10G02400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=541bp
MPTLVIASRLLLVLLACTVAAKAEYTQAALEDEILDLPGLNYAPKFRHFS
GYVVIPGIRPNATKHVHYHFIESEQDPTKDPVVWWTNGGPGCSGLLALFT
EMGPFKPNLEGVLLENAYRWNQVANMLFVEQPVGVGFSYSTDPTTDYELG
DHQAAKDNYAFILAFFEKFPQYLPNDFVISSESWGGHYIPTLAVRIVREQ
SKPDVSPKLNFVGFLVGNPFTSWVNNRQATVKALVGHSLVSYPTAAAWEE
QCADFVVAPQYLFGNCLEIEAKMNMEMADLNPYALSYPVCLDESPIASLV
KHGRAQRTWLLHHTTPPEAKAKMKNELGEGVGIIDIDGYEPCEDNYLVSY
LNQPAVKEALHVDSSIVWTECSSIIKYDLFAFFVPMEPLYKYLINGKYNL
KMLVYSGDDDSVCGTWGTQKWMYGLGQKAVTNWVPWRDDAGQVAGFVTQF
RGNLTMATVAGAGHEVPSYTPATALKLFRLYLDNSWFDPAAFRPWSDGGE
KEVGSEQREQDEQQQGQDVQQQEEREQQQELIKASLRRHA*
back to top
Synonyms
Publications