NO10G01770, NO10G01770 (gene) Nannochloropsis oceanica

Overview
NameNO10G01770
Unique NameNO10G01770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1554
Alignment locationchr10:492445..493998 +

Link to JBrowse

Properties
Property NameValue
DescriptionCathepsin z
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:492445..493998 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR013128Peptidase_C1A
IPR033157Cathepsin_X
IPR000668Peptidase_C1A_C
Homology
BLAST of NO10G01770 vs. NCBI_GenBank
Match: GAQ86878.1 (Cysteine proteinases superfamily protein [Klebsormidium nitens])

HSP 1 Score: 236.9 bits (603), Expect = 8.900e-59
Identity = 119/259 (45.95%), Postives = 167/259 (64.48%), Query Frame = 0
Query:   38 VIRAARPHTYLSANDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIASKGQLPDVMPAPQVVINCGTAGD---CNGGDSGAAYAWIHEVGGIPDVSCQAYEAKNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAAIIAEIYARGPVVCYIDAGP-LEDYTGGV-NMYEGAHGTNHAIALVGWGETTDGIKFYIGRNSWGSYWGEKGWFRIVRG--GAFDAGTCFWAVP 290
            ++ +  P TYL   D+P+ +D R++ G++Y T  +NQHIP YCGSCW+    S+L DR+A+  KG  P+V  +PQV++NC T  D   CNGG   AAYAWI +  G+ D +CQ Y+AK+  C+  + C NC+PE       + C+AV+KY K  V E+G V+G+ A++AEI ARGP+ C +   P  E Y+GG+ N   G    +H I++ G+GE  +G+K++IGRNSWG+YWGE GWFRIVRG         C WAVP
Sbjct:  426 LVTSPLPQTYLKPEDIPTSYDIRNLSGVNYATANRNQHIPSYCGSCWAHGTSSALSDRIALHRKGAWPEVQLSPQVLVNCVTDDDTKGCNGGSPTAAYAWIAK-NGLSDETCQNYQAKDLSCSALHQCENCSPE-------KGCWAVEKYQKWTVSEFGIVSGEEAMLAEITARGPMACGMCVTPEFEAYSGGIFNDTTGCTEEDHDISIAGFGE-ENGVKYWIGRNSWGTYWGEGGWFRIVRGTNNLGIENRCDWAVP 675          
BLAST of NO10G01770 vs. NCBI_GenBank
Match: XP_005847382.1 (hypothetical protein CHLNCDRAFT_35526 [Chlorella variabilis] >EFN55280.1 hypothetical protein CHLNCDRAFT_35526 [Chlorella variabilis])

HSP 1 Score: 235.3 bits (599), Expect = 2.600e-58
Identity = 120/273 (43.96%), Postives = 163/273 (59.71%), Query Frame = 0
Query:   31 PASYQNEVIRAARPHTYLSANDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIASKGQLPDVMPAPQVVINCGTAGDCNGGDSGAAYAWIHEVGGIPDVSCQAYEAKNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAAIIAEIYARGPVVCYIDAGP-LEDYTGGV-NMYEGAHGTNHAIALVGWGETTDGIKFYIGRNSWGSYWGEKGWFRIVRGGAFDA----------GTCFWAVPSS 292
            P+     ++++A PHT+LSA DLP  +DWR+V+G +Y +  +NQHIP YCGSCW+ +A SSL DR+ I   G  P    + Q VI+CG AG C GG  G  Y +     GIPD +C  Y+A N+ C  ++ C  C P       G  C  +++Y ++ VEE+G V G  A+ AE++ RGP+ C IDA   L+ YTGG+   Y     TNH +++VGWGE  DGI F+I RNSWG  WGE+G+FRIV   AFD            +C WAVP +
Sbjct:   52 PSPSYRPLVKSALPHTFLSAEDLPKSFDWRNVNGTNYLSTTRNQHIPQYCGSCWAHAATSSLADRINIKRGGAWPSAYLSVQNVIDCGHAGSCQGGWDGLVYEYAAR-HGIPDETCNLYQAVNQECNHKHQCYTCWP-------GEGCLPLEQYQRLVVEEHGRVEGAHAMRAEVFRRGPISCSIDASEGLDKYTGGIYTEYNPEPQTNHIVSVVGWGE-EDGIPFWIVRNSWGQPWGEQGFFRIVTSEAFDGRGNDFNLAIETSCGWAVPET 315          
BLAST of NO10G01770 vs. NCBI_GenBank
Match: PRW44447.1 (cathepsin [Chlorella sorokiniana])

HSP 1 Score: 235.3 bits (599), Expect = 2.600e-58
Identity = 120/273 (43.96%), Postives = 163/273 (59.71%), Query Frame = 0
Query:   28 LRDPASYQNEVIRAARPHTYLSANDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIASKGQLPDVMPAPQVVINCGTAGDCNGGDSGAAYAWIHEVGGIPDVSCQAYEAKNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAAIIAEIYARGPVVCYIDAGP-LEDYTGGV-NMYEGAHGTNHAIALVGWGETTDGIKFYIGRNSWGSYWGEKGWFRIVRGGAFDA----------GTCFWAV 289
            +R PA Y+  +I++  PHTYL+A  LP  WDWR+V+G ++ +  +NQHIP YCGSCW+  A SSL DR+ I   G  P    + Q VI+CG AG C GG  G  Y +     GIPD +C  Y+A N+ C  ++ C  C P       G  C  +++Y ++ V E+G V+G  A+ AE+Y RGP+ C IDA   L+ YTGG+ + Y     TNH +A+VGWGE  DG+ ++I RNSWG  WGE+G+FRIV   AF+           G C WAV
Sbjct:   52 VRRPADYE-PLIKSPLPHTYLNAEQLPKNWDWRNVNGTNFLSTTRNQHIPQYCGSCWAHGATSSLADRMNIKRGGAWPSAYLSVQNVIDCGEAGSCQGGWDGLVYKYAARY-GIPDETCNLYQAINQKCNKKHQCYTCWP-------GEGCLPLEEYDRLVVSEHGRVSGADAMRAEVYTRGPISCTIDATTGLDKYTGGIYSEYNPEAQTNHIVAVVGWGE-EDGVPYWIVRNSWGQPWGEQGFFRIVTSEAFEGRGNDYNLAIEGDCGWAV 314          
BLAST of NO10G01770 vs. NCBI_GenBank
Match: CBN79525.1 (Cathepsin Z-like proteinase [Ectocarpus siliculosus])

HSP 1 Score: 234.6 bits (597), Expect = 4.400e-58
Identity = 116/253 (45.85%), Postives = 152/253 (60.08%), Query Frame = 0
Query:   44 PHTYLSANDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIASKGQLPDVMPAPQVVINCGT--AGDCNGGDSGAAYAWIHEVGGIPDVSCQAYEAKNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAAIIAEIYARGPVVCYIDAGPLEDYTGGV-NMYEGAHGTNHAIALVGWGETTDGIKFYIGRNSWGSYWGEKGWFRIVRG--GAFDAGTCFWAVPSS 292
            PHTYL  +DLP  + W +V G SY T   NQHIP YCGSCW+  A+SSL DR+ I   G+  D+  + QV++NC T  AG C+GG     Y +      +P  +CQ Y+A +  C     C+ C            C AV+ +P   V EYG V+G+A I+AE++ARGPV C IDA PL +YTGGV ++ + +  T+H +A+ GWGET +G KF+I RNSWG YWGE GWFR+ RG         C WAVP S
Sbjct:   25 PHTYLDPSDLPRFFSWTNVGGRSYVTKNLNQHIPQYCGSCWAHGALSSLADRIKIMRDGRGADINLSVQVILNCATELAGSCHGGSHTGTYEYASN-NPVPFDTCQQYQASDNTCDAIGKCKTC------WNFDEECAAVESFPNATVAEYGTVSGEADIMAEVFARGPVACEIDASPLREYTGGVIDIPDVSAETDHIVAIAGWGETREGDKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGS 270          
BLAST of NO10G01770 vs. NCBI_GenBank
Match: OAO12662.1 (cysteine protease 1 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 234.6 bits (597), Expect = 4.400e-58
Identity = 113/265 (42.64%), Postives = 171/265 (64.53%), Query Frame = 0
Query:   30 DPASYQNEVIRAARPHTYLSANDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIASKGQLPDVMPAPQVVINCG-TAGDCNGGDSGAAYAWIHEVGGIPDVSCQAYEAKNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAAIIAEIYARGPVVCYIDAGP--LEDYTGGVNMYEGAHGTNHAIALVGWGETTDGIKFYIGRNSWGSYWGEKGWFRIVRG--GAFDAGTCFWAVP 290
            +P +   ++++  +P+T+++  +LP  +D R++DG +Y T  +NQHIP YCG+CW+F+A S++GDRL + +KG  P+   +PQV++NC  T+  C+GG   AA+ ++H+V G+P+  C  Y AK+  CT  N CR+C  +         C+AV  Y K +VEEYG++ G+  ++AEIYARGP+ C I      +E  TG      G+    H+I+++GWGE  DG+K++IGRNSWGSYWGE G+FR+VRG         C WAVP
Sbjct:   20 NPKARVPDLVKTPQPYTFMANKELPKSYDPRNLDGHNYVTVAKNQHIPQYCGACWAFAATSAVGDRLKMMTKGAWPERDLSPQVILNCDKTSDSCSGGHPLAAFKYMHDV-GVPEEGCMRYMAKDMECTDINICRDCGHD-------TPCHAVYNYTKFYVEEYGSIAGEKNMMAEIYARGPITCTIAVPDDLMEYKTGVYRDTTGSTALEHSISVLGWGE-EDGVKYWIGRNSWGSYWGEHGFFRVVRGENNLGIEADCQWAVP 275          
BLAST of NO10G01770 vs. NCBI_GenBank
Match: XP_012895677.1 (uncharacterized protein [Blastocystis hominis] >CBK21629.2 unnamed protein product [Blastocystis hominis])

HSP 1 Score: 234.2 bits (596), Expect = 5.700e-58
Identity = 125/255 (49.02%), Postives = 154/255 (60.39%), Query Frame = 0
Query:   44 PHTYLSANDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIASKGQLPDVMPAPQVVINCGTAGDCNGGDSGAAYAWIHEVGGIPDVSCQAYEAKNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAAIIAEIYARGPVVCYIDA-GPLEDYTGGVNMYEGAHG---TNHAIALVGWGETTDGIKFYIGRNSWGSYWGEKGWFRIVRGGAFDAGT-CFWAVPSSDF 294
            PHTYL ANDLP+ +D R+VDG++Y T  +NQHIPV+CGSCW+  + ++L DR+ I  KG  P V  A QVV+NCG AG C+GG     YA+ HEV  IPD +CQ YEA +  C+ EN CRNC PE         C+AV  Y    + EYG V G  AI AEI+ARGPV C +       DY GGV  YE         H + + GWG   +G  ++IGRNSWG YWGE+GWFRI        G+ C W VP  DF
Sbjct:  317 PHTYLKANDLPASYDIRNVDGVNYATWNRNQHIPVWCGSCWAQGSTAALSDRINIMRKGAWPAVNLAVQVVLNCGDAGSCHGGWDDGVYAYAHEV-DIPDQTCQPYEAVDHECSPENICRNCDPE--------KCWAVTDYKVYKISEYGRVRGIDAIKAEIFARGPVSCSMTVRESFLDYHGGV--YESDSSPMVAGHIVEIAGWG-VENGRPYWIGRNSWGEYWGEEGWFRIDMEKDSGIGSDCGWGVPIIDF 559          
BLAST of NO10G01770 vs. NCBI_GenBank
Match: CCA15230.1 (cathepsinlike cysteine protease putative [Albugo laibachii Nc14])

HSP 1 Score: 232.3 bits (591), Expect = 2.200e-57
Identity = 126/288 (43.75%), Postives = 173/288 (60.07%), Query Frame = 0
Query:    5 LLLLATTALVGADHIVYRSGELALRDPASYQNEVIRAARPHTYLSANDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIASKGQ---------LPDVMPAPQVVINCGTA-GDCNGGDSGAAYAWIHEVGGIPDVSCQAYEA----KNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAAIIAEIYARGPVVCYID-AGPLEDYTGGV-NMYEGAHGTNHAIALVGWGETTDGIKFYIGRNSWGSYWGEKGWFRIVRG 277
            LL  A  AL+     +   G+   R   S ++E++ + RPH  L +++LP  +D R +DG+++ T  +NQHIP YCGSCW+F++ SSL DR+ I              L +V+ APQV++NC TA G C+GGD  +A+ +IHE  GIPD SCQ YEA        C  ++ C NCAP        R C+A   Y K +V E+G V G+  + AEIYARG +VC +D      +Y GGV +    A   +HAI++VGWGE  DG K+++ RNSWGS+WGE GWFRIVRG
Sbjct:    2 LLFCAFAALLALSRPILSGGKCYQRH--SNRSELLTSPRPHELLDSSELPKNFDLRDIDGVNHVTITRNQHIPFYCGSCWAFASTSSLSDRIHIQRSRNRKEKSPVDVLREVVLAPQVLLNCDTADGGCHGGDPLSAFRYIHE-NGIPDESCQRYEATGHDTGNQCRPQDVCENCAP-------SRGCWAQKSYEKYYVSEFGTVRGEHQMKAEIYARGSIVCTVDVTDAFLNYEGGVFDDKTHAVSMDHAISVVGWGEMKDGTKYWVVRNSWGSFWGEDGWFRIVRG 279          
BLAST of NO10G01770 vs. NCBI_GenBank
Match: OAO16946.1 (cysteine protease 1 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 230.3 bits (586), Expect = 8.300e-57
Identity = 115/271 (42.44%), Postives = 163/271 (60.15%), Query Frame = 0
Query:   27 ALRDPASYQNEVIRAARPHTYLSANDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIASKGQLPDVMPAPQVVINCGTAGDCNGGDSGAAYAWIHEVGGIPDVSCQAYEAKNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAAIIAEIYARGPVVCYID-AGPLEDYTGGVNMYEGAHGT-NHAIALVGWGETTDGIKFYIGRNSWGSYWGEKGWFRI--VRGGAFDAGTCFWAVPSSDF 294
            A+R+  +    VI+  +P+TYL+A  LP  +D R++DG +Y T  +NQHIP YCGSCW+  + S++ DR  +  KG  P V  + Q VINCG +G C+GG     YA+  E  GIPD +CQ YEAK++ C+  N C +C P+       + C+ + +Y +  + EYG+V+G   + AEIYARGP+ C+++      DYTGG+ +     G   H I + GWG+T DG +++IGRNSWG YWGE GWFRI   +        C W VP  DF
Sbjct:  303 AVRNDWNKVKPVIKTPQPYTYLNAAKLPESYDIRNIDGHNYATWNKNQHIPQYCGSCWAQGSTSAIADRFNLMRKGAWPSVELSVQEVINCGHSGSCHGGWDSGVYAYA-EKEGIPDQTCQVYEAKDKECSDMNRCVDCDPD-------KGCFPIKEYKRYKINEYGSVSGAEKMKAEIYARGPISCFVEVTQQFLDYTGGLFVETDHAGLGGHIIEVTGWGKTEDGQEYWIGRNSWGEYWGENGWFRIQMYKDNLEIETGCTWGVPIIDF 565          
BLAST of NO10G01770 vs. NCBI_GenBank
Match: XP_014526782.1 (peptidase C1A family protein [Blastocystis sp. subtype 4] >KNB43339.1 peptidase C1A family protein [Blastocystis sp. subtype 4])

HSP 1 Score: 229.9 bits (585), Expect = 1.100e-56
Identity = 121/286 (42.31%), Postives = 168/286 (58.74%), Query Frame = 0
Query:   16 ADHIVYRSGELALRDPASYQNEVIRAARPHTYLSANDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIASKGQLPDVMPAPQVVINCGTAGDCNGGDSGAAYAWIHEVGGIPDVSCQAYEAKNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAAIIAEIYARGPVVCYI-DAGPLEDYTGGVNM-YEGAHGTNHAIALVGWGETTDGIKFYIGRNSWGSYWGEKGWFRIVRG----GAFDAGTCFWAVPSSDFSI 296
            A+   Y     A ++  +  + VI++  PHTYLS  ++P  +D R+VDG +Y T  +NQHIPVYCGSCW+ +  S+L DR+ I  KG+ P +  + Q VINCG +G C+GG  G  Y   H+  GIPD +CQ YEA ++ CT  N C +C P       G  C+AV  Y +  + EYG V G   + AE++ARGP+ C I       DY GG+ + ++  +   HAI + GWG+T DG +++I RNSWG YWGE GW R++ G    G  D   C W VP  DFS+
Sbjct:  291 ANRARYFPHSCAFKNDWNKLHPVIKSPLPHTYLSKEEIPETYDIRNVDGHNYATWNKNQHIPVYCGSCWAQAPTSALSDRMNIMRKGKWPSIELSVQEVINCGNSGSCHGGFEGGVYEHAHK-EGIPDQTCQVYEAIDKECTDMNQCMDCPP-------GEACHAVKDYKRYKIGEYGYVRGVEKMKAELFARGPISCGIMVTQEFLDYQGGLFIEHDHDYLGGHAIEVTGWGKTEDGQEYWIVRNSWGEYWGENGWVRMLIGDKNLGIED--DCTWGVPIIDFSL 566          
BLAST of NO10G01770 vs. NCBI_GenBank
Match: OWZ24031.1 (Cysteine protease [Phytophthora megakarya])

HSP 1 Score: 229.9 bits (585), Expect = 1.100e-56
Identity = 118/274 (43.07%), Postives = 154/274 (56.20%), Query Frame = 0
Query:   44 PHTYLSANDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIASKGQLPDVMPAPQVVINCGTAGDCNGGDSGAAYAWIHEVGGIPDVSCQAYEAKNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAAIIAEIYARGPVVCYIDA-GPLEDYTGGV-NMYEGAHGTNHAIALVGWG-ETTDGIKFYIGRNSWGSYWGEKGWFRIV--RGGAFDAGTCFWAVPSSDFS--IDYGVGREGGKTEGEN 311
            PH  + A DLP  WDWR +DG +Y T  +NQHIP YCGSCW+    S+L DR++I      P++  +PQV+INC   G CNGG+ G  Y + H   GIPD +CQAY+AKN  C     C  C P       G  C  + K+ K FV EYG+V+G   + AEIY RGP+ C + A    E YTGG+ + +      NH I++ GWG +     +++IGRNSWG+YWGE GWFRI            C W VP  D S   D+ V  +G +  G N
Sbjct:  349 PHETMDAKDLPKNWDWRDIDGKNYVTWDKNQHIPKYCGSCWAQGTTSALSDRISILRNASWPEIALSPQVLINCHAGGTCNGGNPGLVYEYAHR-HGIPDQTCQAYQAKNLQCDQFAICETCWPSKESFTPG-VCEPIKKFAKYFVSEYGSVSGADHMKAEIYKRGPIGCGVHATSKFESYTGGIYSEHVMFPIINHEISVAGWGYDEESDTEYWIGRNSWGTYWGENGWFRIQMHHNNLGIEQDCDWGVPLPDGSKPNDFVVDYQGNQAIGRN 620          
The following BLAST results are available for this feature:
BLAST of NO10G01770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAQ86878.18.900e-5945.95Cysteine proteinases superfamily protein [Klebsorm... [more]
XP_005847382.12.600e-5843.96hypothetical protein CHLNCDRAFT_35526 [Chlorella v... [more]
PRW44447.12.600e-5843.96cathepsin [Chlorella sorokiniana][more]
CBN79525.14.400e-5845.85Cathepsin Z-like proteinase [Ectocarpus siliculosu... [more]
OAO12662.14.400e-5842.64cysteine protease 1 [Blastocystis sp. ATCC 50177/N... [more]
XP_012895677.15.700e-5849.02uncharacterized protein [Blastocystis hominis] >CB... [more]
CCA15230.12.200e-5743.75cathepsinlike cysteine protease putative [Albugo l... [more]
OAO16946.18.300e-5742.44cysteine protease 1 [Blastocystis sp. ATCC 50177/N... [more]
XP_014526782.11.100e-5642.31peptidase C1A family protein [Blastocystis sp. sub... [more]
OWZ24031.11.100e-5643.07Cysteine protease [Phytophthora megakarya][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01770.1NO10G01770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586254gene_4037Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01770.1NO10G01770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01770 ID=NO10G01770|Name=NO10G01770|organism=Nannochloropsis oceanica|type=gene|length=1554bp
CAGGCCCAAAGTTTTATCTTCTCCCCTCCTGACGCACACGAGCGACTCGA
ACACGATGATGATGAAGTTGCTGCTCCTAGCCACCACAGCTCTAGTTGGC
GCGGATCATATTGTGTACCGGTCTGGGGAGTTGGCGCTGCGAGACCCTGC
GTCGTACCAGAACGAAGTAATTCGGGCGGCCCGACCTCATACTTACCTGT
CGGCTAATGACCTGCCTTCGGAGTGGGATTGGCGCTCAGTCGATGGGCTC
TCTTACACCACGCCGATCCAGAACCAACATATCCCGgtacgcataaaagg
gatgacagatgcattgcatgtatggcctggcgacagaagcgtgtgacgac
tctgtaaagccccgacgctaacgatggttgtcatccgtccaatttacttt
tcgcaccacattcaaatatgtatagaaccgcgttttttcgatgtcgtttt
aacttttccacttattccatttcctccattttgcttgacacagGTGTACT
GTGGTTCGTGCTGGTCTTTCAGCGCCATGTCCTCGCTAGGGGATCGGCTT
GCTATTGCATCCAAAGGACAGCTGCCAGACGTGATGCCCGCACCACAAGT
TGTTATCAATTGTGGGACAGCCGGGGACTGTAACGGTGGAGACAGCGGGG
CAGCTTACGCGTGGATACATGAAGTGGGAGGCATCCCTGATGTGAGCTGC
CAGGCTTACGAGGCGAAGAATCGGCCATGCACGTTGGAAAATACCTGCAG
AAATTGTGCACCCGAGTTTAGGAAATTGCGGAAGGGACGCACATGTTATG
CGGTTGACAAGTACCCTAAAATTTTCGTGGAGGAATATGGAAATGTCACG
GGGGACGCGGCAATTATAGCAGAAATTTACGCGAGGGGGCCGGTGGTCTG
CTATATCGATGCGGGGCCACTTGAGGATTATACTGGGGGGGTTAACATGT
ATGAAGGCGCCCACGGTACGAATCACGCGATTGCACTGGTGGGGTGGGGG
GAGACGACAGATGGTATCAAATTTTACATCGGGAGGAATAGCTGGGGGAG
CTACTGGGGTGAGAAGGGCTGGTTTCGCATTGTACGAGGAGGAGCTTTTG
ACGCCGGTACGTGTTTCTGGGCAGTACCGTCATCCGACTTCAGCATTGAT
TATGGGGTGGGCAGGGAAGGTGGAAAAACAGAAGGAGAAAATAATTGGAC
GGATGGAAACTTGTTCTCCATGGTGCAGTAAGTATCTTGGCGTCTTTTTT
GTCGTCATTTGAATGGAAACGGCTTCGTCAGAGCAGCGCGAGGCCAGATG
GGAGAAGCGAAGCGCAGAGTTAGATATACTTACCAATGGTGACAGTCAAG
CGAATAGCAAAACGAACAAGACGAAATATGTATTCAGTTGTCCTTCTGTT
GTTGCACAGAGAGTTAGAGAAAAGAGTGTAGGGCTACGCGTCCATTTTCT
ACCAAGTATACAAAGATTGGGGGTAAATGCAGGCACACGTGCATGTAGAA
ACTGGTGTCGGCGCCGCCTTTCCAAATAAATATTCACAGAAGAGTCTTTC
CGTA
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protein sequence of NO10G01770.1

>NO10G01770.1-protein ID=NO10G01770.1-protein|Name=NO10G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=323bp
MMMKLLLLATTALVGADHIVYRSGELALRDPASYQNEVIRAARPHTYLSA
NDLPSEWDWRSVDGLSYTTPIQNQHIPVYCGSCWSFSAMSSLGDRLAIAS
KGQLPDVMPAPQVVINCGTAGDCNGGDSGAAYAWIHEVGGIPDVSCQAYE
AKNRPCTLENTCRNCAPEFRKLRKGRTCYAVDKYPKIFVEEYGNVTGDAA
IIAEIYARGPVVCYIDAGPLEDYTGGVNMYEGAHGTNHAIALVGWGETTD
GIKFYIGRNSWGSYWGEKGWFRIVRGGAFDAGTCFWAVPSSDFSIDYGVG
REGGKTEGENNWTDGNLFSMVQ*
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Synonyms
Publications