NO10G01730, NO10G01730 (gene) Nannochloropsis oceanica

Overview
NameNO10G01730
Unique NameNO10G01730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2278
Alignment locationchr10:482217..484494 +

Link to JBrowse

Properties
Property NameValue
DescriptionPapain family cysteine protease containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:482217..484494 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR013128Peptidase_C1A
IPR013201Prot_inhib_I29
IPR000668Peptidase_C1A_C
Homology
BLAST of NO10G01730 vs. NCBI_GenBank
Match: KPI82686.1 (putative cysteine proteinase [Leptomonas seymouri])

HSP 1 Score: 165.6 bits (418), Expect = 2.500e-37
Identity = 99/269 (36.80%), Postives = 143/269 (53.16%), Query Frame = 0
Query:   51 TFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRKGVNEYADWTEAELRGMLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELSGLRQQERLLTNLPTHVDWREK--GAVTKPKNQGACGSCWTFSGVQAIESALWLSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVL-AQGFSLEQDYPYVSGNGTEPMCLRQPLH-VGSIAGYVDVTPNDLGAHMLAVNSQ-PLAISLDASEFHNYHSGV 315
            +F  YV ++GK Y   + E+ +R  +F KR   I+  N    NG  ++RKG+N   DWT+ EL  + G +P             +  +L +   N S              LP HVD+R      +T  KNQG CGSCW  S V+A+ES   + TG+L  LS Q+  +CTPNP HCGGTGGC G+ + + +DY+  A G   E  YPY +  G    C  +P+H V  ++ YV++  ND  A M AV  + P+++S+DAS +  Y SG+
Sbjct:   28 SFVSYVRQYGKHY--DAAEYSRRLKIFTKRLHEIEEFNR---NGMHSYRKGLNHMTDWTDDELSALNGARPM--------MARNIQSSLPKHIHNRSS-----------HTLPHHVDYRTSVPPVLTAIKNQGYCGSCWAHSAVEAMESHWAILTGRLHVLSLQQVTACTPNPRHCGGTGGCSGSIEPLAFDYIAKAGGIQEEWAYPYTAYYGETGQCENRPIHKVAWVSSYVELPENDQEALMDAVAFEGPISVSVDASGWSAYASGI 272          
BLAST of NO10G01730 vs. NCBI_GenBank
Match: PRP89226.1 (hypothetical protein PROFUN_02100 [Planoprotostelium fungivorum])

HSP 1 Score: 163.3 bits (412), Expect = 1.200e-36
Identity = 95/273 (34.80%), Postives = 143/273 (52.38%), Query Frame = 0
Query:   50 YTFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRKGVNEYADWTEAELRGMLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELSGLRQQERLLTNLPTHVDWREKGAVTKPKNQGACGSCWTFSGVQAIESALWLSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVL--AQGFSLEQDYPYVSGNGTEPMCLRQPLH---VGSIAGYVDVTPNDLGAHMLAVNS-QPLAISLDASEFHNYHSGVLT 317
            YTF++Y+E+  K Y   + E + RR LF K  + + AHNA   +   +++ G+N  +DWTE E R  LG+     +H+       V       +  + ++SG          +PT+ DWR +G ++  K+QG CGSCWTF   + IES   + TG L  LS+Q+ + C PN   CGGTGGC G T +++++ ++    G + E  YPY S       C   PL      SI G+V +  N     M A+ +  PLA+++DAS +  Y SGV T
Sbjct:   34 YTFEQYMEDHNKAY--RASELQMRRALFEKNVQRVNAHNA---DSSKSWKMGINHLSDWTEEEFRATLGYDKELGFHQMSKRAQVV-------SDEDIDISG----------IPTNWDWRTQGVISDVKDQGRCGSCWTFGAAETIESHYAIQTGFLQDLSQQQIIDCIPNALQCGGTGGCQGGTAELVFETLVQTTGGLASEWTYPYRSYYADNFTCQYDPLKTKAAASITGHVVLPSNQYAPVMKALATVGPLAVNVDASSWSFYESGVYT 284          
BLAST of NO10G01730 vs. NCBI_GenBank
Match: EJY75943.1 (Oryzain gamma chain (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 162.5 bits (410), Expect = 2.100e-36
Identity = 105/272 (38.60%), Postives = 138/272 (50.74%), Query Frame = 0
Query:   52 FDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRKGVNEYADWTEAELRGMLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELSGLRQQERLLTNLPTHVDWREKGAVTKPKNQGACGSCWTFSGVQAIESALWLSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVLAQGFSLEQDYPYVSGNGTEPMCLRQPLHVGSIAGYVD-------VTPNDLGAHMLAVNSQPLAISLDAS-EFHNYHSGVL 316
            F  Y+  FGK Y     E++KR  LFLK K  I    AA  N   TFR G N+++DWTE E + +LG KPSEE H  +H   ++L   I                     LP   DWR+ G V   K+QG CGSCW FS    +ES   +  GKL++LSEQ+ V C+   D+ G  GG   ATQ   YDYV + G   E DYPY++ +GT   C R       I  YV+       ++P+ L A +      P ++S+DAS  F NY SG+L
Sbjct:   36 FLNYIARFGKSYAT-KAEFQKRAKLFLKTKMEIM--QAASSNSVPTFRLGFNQFSDWTEEEFQAILGNKPSEEEHDVYHEHLKILEDAI---------------------LPASKDWRDDGVVNPVKDQGRCGSCWAFSTAAGVESHFAIQFGKLYSLSEQQLVDCSTAYDNAGCNGGL--ATQG--YDYVKSYGLEQEADYPYLAADGT---CHRDK---SKIVAYVEDFHTVQTLSPSQLKAAL--ATQGPASVSVDASGVFKNYQSGIL 271          
BLAST of NO10G01730 vs. NCBI_GenBank
Match: XP_023332087.1 (zingipain-2-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 162.2 bits (409), Expect = 2.800e-36
Identity = 100/279 (35.84%), Postives = 141/279 (50.54%), Query Frame = 0
Query:   44 LEPQHNYTFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRKGVNEYADWTEAELRG-MLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELSGLRQQERLLTNLPTHVDWREKGAVTKPKNQGACGSCWTFSGVQAIESALWLSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVLAQGFSLEQDYPYVSGNGTEPMCLRQPLH----VGSIAGYVDVTPNDLGA---HMLAVNSQPLAISLDASEFHNYHSGV 315
            L  Q+N  F ++   +GK Y    EE E R  +F +  + I+ HN      K+T+  G+N + D T+ E     LG+K     H   H                       ++ R + +LP  VDWREKG ++  KNQG+CGSCW     + +ES + L +  L  LS Q+  SC PNP  CGGTGGC G+T  + Y+Y    G  LE++YPY+SG+ +E       L     V SI GY ++ PN + A   H+  V   PLAIS+ A+ F NY+ GV
Sbjct:   16 LAVQYNQEFAQFKSTYGKVYRSVGEE-ENRFKIFSENMEKIREHN----EKKSTYTMGMNMWTDLTDEEWSNQFLGYKRVSTLHPAVH-----------------------KESRDVKDLPASVDWREKGVISDVKNQGSCGSCWAVCATEQMESYVALQSEVLLELSSQQVTSCAPNPLTCGGTGGCQGSTPPLAYNYAQLFGLVLEEEYPYISGSTSETEDCEYNLSNLSPVASITGYNNLPPNSMEAVIQHIAEVG--PLAISVAANTFKNYNGGV 264          
BLAST of NO10G01730 vs. NCBI_GenBank
Match: XP_023332086.1 (zingipain-2-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 162.2 bits (409), Expect = 2.800e-36
Identity = 100/279 (35.84%), Postives = 141/279 (50.54%), Query Frame = 0
Query:   44 LEPQHNYTFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRKGVNEYADWTEAELRG-MLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELSGLRQQERLLTNLPTHVDWREKGAVTKPKNQGACGSCWTFSGVQAIESALWLSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVLAQGFSLEQDYPYVSGNGTEPMCLRQPLH----VGSIAGYVDVTPNDLGA---HMLAVNSQPLAISLDASEFHNYHSGV 315
            L  Q+N  F ++   +GK Y    EE E R  +F +  + I+ HN      K+T+  G+N + D T+ E     LG+K     H   H                       ++ R + +LP  VDWREKG ++  KNQG+CGSCW     + +ES + L +  L  LS Q+  SC PNP  CGGTGGC G+T  + Y+Y    G  LE++YPY+SG+ +E       L     V SI GY ++ PN + A   H+  V   PLAIS+ A+ F NY+ GV
Sbjct:   16 LAVQYNQEFAQFKSTYGKVYRSVGEE-ENRFKIFSENMEKIREHN----EKKSTYTMGMNMWTDLTDEEWSNQFLGYKRVSTLHPAVH-----------------------KESRDVKDLPASVDWREKGVISDVKNQGSCGSCWAVCATEQMESYVALQSEVLLELSSQQVTSCAPNPLTCGGTGGCQGSTPPLAYNYAQLFGLVLEEEYPYISGSTSETEDCEYNLSNLSPVASITGYNNLPPNSMEAVIQHIAEVG--PLAISVAANTFKNYNGGV 264          
BLAST of NO10G01730 vs. NCBI_GenBank
Match: XP_013753329.1 (papain family cysteine protease containing protein [Thecamonas trahens ATCC 50062] >KNC55018.1 papain family cysteine protease containing protein [Thecamonas trahens ATCC 50062])

HSP 1 Score: 161.0 bits (406), Expect = 6.200e-36
Identity = 99/283 (34.98%), Postives = 145/283 (51.24%), Query Frame = 0
Query:   44 LEPQHNYTFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRKGVNEYADWTEAELRGMLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELSGLRQQERLLTNLPTHVDWRE--KGAVTKPKNQGACGSCWTFSGVQAIESALWLSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVLAQ---GFSLEQDYPYVS--GNGTEPM----CLRQPLHVGSIAGYVDVTPNDLGAHMLA-VNSQPLAISLDASEFHNYHSGV 315
            L  +H YTF  Y+++F       S+    R ++F +R   I AHNA +L G  ++  GVN +   T++E   + G +P    H   H+   V                   +   L +LP+H+DWR+      T  KNQG CGSCW+F+  + +ES   L+TGKL  LS+Q+ +  TPNP  CGGTGGC G T  + YD+++         E  YPY S  G    P+     ++ P    +I GY+ +  ND  A M A VN+ P+A+S+DAS +H+Y  GV
Sbjct:   30 LTAEHGYTFAAYLDDFPSVTQMWSDVTVDRESIFARRLAVINAHNARYLAGHASWYMGVNLHTALTDSERASLRGLRPERNAHAGKHATPYV------------------PRSASLADLPSHIDWRDHSPSITTAVKNQGQCGSCWSFATAETLESHYALATGKLQALSQQQVLE-TPNPQQCGGTGGCGGGTAQLAYDFMVDAWNGTLGSEWTYPYRSFFGQNFPPVSNSSAMKAP--AAAITGYMQLPNNDAHALMDALVNAGPIAVSVDASVWHDYAGGV 291          
BLAST of NO10G01730 vs. NCBI_GenBank
Match: XP_009033689.1 (hypothetical protein AURANDRAFT_11974, partial [Aureococcus anophagefferens] >EGB11307.1 hypothetical protein AURANDRAFT_11974, partial [Aureococcus anophagefferens])

HSP 1 Score: 160.2 bits (404), Expect = 1.100e-35
Identity = 100/282 (35.46%), Postives = 145/282 (51.42%), Query Frame = 0
Query:   50 YTFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRKGVNEYADWTEAELRGMLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELSGLRQQERL-----LTNLPTHVDWREK--GAVTKPKNQGACGSCWTFSGVQAIESALWLSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVLAQGFSLEQDYPYVSG-NGTEPMC---LRQPL-HVGSIAGYVDVTPNDLGAHMLA-VNSQPLAISLDASEFHNYHSGVLTFE 319
            YTF++Y  +FGK Y P  +E ++RR +F  R KSI  HN       +T++KGVN   D T+ E R +                           G +  L+  R +  L     L  LPT  DWR++    +T  K+QG CGSCW F+  + IES + L+TG+L  L+ Q  VSC  N   CGGTGGC G+  ++ ++YV   G + E  YPY +G +G    C      P+    +++GY  V  ND  A + A V+  PLA+++DA  +H+Y SG+ T E
Sbjct:    1 YTFEQYKADFGKSYAP--QEDDERRVIFEARLKSILEHN----TNPSTYKKGVNALTDRTDDERRAL--------------------------NGRDKALAASRPRAALAAPAPLAALPTTFDWRDRRPSVLTAVKDQGQCGSCWAFASTETIESHVALNTGELVELAPQHLVSCAANVYDCGGTGGCGGSIAELAFEYVQTHGMATEWTYPYTAGLDGKSGSCRYNASSPIPKAVTVSGYERVASNDEAAVLAALVSKGPLAVNVDAGGWHDYESGIYTAE 250          
BLAST of NO10G01730 vs. NCBI_GenBank
Match: XP_015662324.1 (putative cysteine proteinase [Leptomonas pyrrhocoris] >KPA83885.1 putative cysteine proteinase [Leptomonas pyrrhocoris])

HSP 1 Score: 160.2 bits (404), Expect = 1.100e-35
Identity = 93/269 (34.57%), Postives = 142/269 (52.79%), Query Frame = 0
Query:   51 TFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRKGVNEYADWTEAELRGMLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELSGLRQQERLLTNLPTHVDWREK--GAVTKPKNQGACGSCWTFSGVQAIESALWLSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVL-AQGFSLEQDYPYVSGNGTEPMCL-RQPLHVGSIAGYVDVTPNDLGAHMLAVNSQ-PLAISLDASEFHNYHSGV 315
            +FD Y+ ++GK Y   + E+ KR  +F +R + I+  N    +GK ++R+G+N+  DWTE E+  + G +P    + +      +                     R    LP  VD+R      +T  K+QG+CGSCW  S V+A+ES   ++TG L  LS+Q+  +CTPNP HCGGTGGC G+ + + YDYV  A G   E  YPY +  G    C   +      ++ YV++  ND  A M AV  + P+A+S+DAS + +Y  G+
Sbjct:   28 SFDAYIRQYGKRY--SAVEYSKRLKIFTERLREIEEFNR---DGKHSYRRGLNKLTDWTEDEIGALNGARPMMSRNLRSSVPKHI-------------------YNRSSHTLPRRVDYRTSVPPVLTSIKDQGSCGSCWAHSAVEAMESHWAIATGHLHVLSQQQVTACTPNPRHCGGTGGCDGSIEALAYDYVAGAGGIQEEWGYPYTAFYGETGKCEDMRTSRPAKVSSYVELPANDQEALMDAVAFKGPIAVSVDASRWFSYRGGI 272          
BLAST of NO10G01730 vs. NCBI_GenBank
Match: EPY25881.1 (cathepsin L [Strigomonas culicis] >EPY34685.1 cathepsin L [Strigomonas culicis])

HSP 1 Score: 159.5 bits (402), Expect = 1.800e-35
Identity = 97/276 (35.14%), Postives = 146/276 (52.90%), Query Frame = 0
Query:   51 TFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRKGVNEYADWTEAEL------RGMLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELSGLRQQERLLTNLPTHVDWR--EKGAVTKPKNQGACGSCWTFSGVQAIESALWLSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVL-AQGFSLEQDYPYVSGNGTEPMCLR-QPLH-VGSIAGYVDVTPNDLGAHMLAVNSQ-PLAISLDASEFHNYHSGV 315
            TF+ ++++F K+Y P   E+ KR+ +F      I  HN+       ++ KG+NE +DWT  E       RG++  K ++  H                     +   ++Q ER   +LP  VD+R      +T  KNQG CGSCW  S V+AIES   L+TG L  LS+Q+  SCTPNP+HCGGTGGC G+ + + + Y+  A G + E  YPY S  G   +C    P   +  + GYV+V  +D  A M AV  + P+++S+DA+ + +Y  G+
Sbjct:   33 TFEAFIKQFNKDYSP--SEYVKRKQIFEANVVDILKHNSE----GHSYYKGINEMSDWTHDEFMHLNAARGLMKQKVTQNLH---------------------DSFTVKQFERTNRSLPHRVDYRRHHPPILTSIKNQGNCGSCWAHSAVEAIESHWALATGNLHVLSQQQITSCTPNPNHCGGTGGCSGSVEQLAFAYIHDAGGIAEEWSYPYTSYYGDSGVCKSVSPFEMIAKVKGYVEVAKDDQEALMEAVAYEGPISVSVDATYWQSYAGGI 281          
BLAST of NO10G01730 vs. NCBI_GenBank
Match: PRP82211.1 (hypothetical protein PROFUN_10420 [Planoprotostelium fungivorum])

HSP 1 Score: 159.5 bits (402), Expect = 1.800e-35
Identity = 97/272 (35.66%), Postives = 140/272 (51.47%), Query Frame = 0
Query:   50 YTFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRKGVNEYADWTEAELRGMLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELSGLRQQERLLTNLPTHVDWREKGAVTKPKNQGACGSCWTFSGVQAIESALWLSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVL---AQGFSLEQDYPYVSGNGTEPMC---LRQPLHVGSIAGYVDVTPNDLGAHMLAVNS-QPLAISLDASEFHNYHSGV 315
            YTF++Y+ +  K Y   +EE   R+  F  R  +++AHNA   N   ++++G+N  +DWT  E   M G+  +       H+       ++    N       +Q++     LP +VDWR+ G VT  K+QG CGSCWTF+  +  ES   ++TG L  LSEQ  + C PNP  CGG GGC G T ++ Y  +L     G   E  YPY S  G    C     +     +I GYV +  N     M+AV +  P+AIS+DAS +H+Y SGV
Sbjct:   30 YTFEQYIADHNKVY--SAEELLARKAAFENRLATVRAHNA---NPGFSWKRGINHMSDWTHEEKNSMKGYDKN-----IGHAMRTKRAKVVSNVPN-------KQEDSENATLPQYVDWRDLGVVTPVKDQGQCGSCWTFATAETAESHYAIATGHLGELSEQHVLDCVPNPLQCGGQGGCSGGTVELAYSNLLLPGTGGMVSEWTYPYRSYFGDAFQCSFNRSRTAVFANITGYVTLPTNKYKPLMIAVATLGPIAISVDASAWHDYESGV 284          
The following BLAST results are available for this feature:
BLAST of NO10G01730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KPI82686.12.500e-3736.80putative cysteine proteinase [Leptomonas seymouri][more]
PRP89226.11.200e-3634.80hypothetical protein PROFUN_02100 [Planoprotosteli... [more]
EJY75943.12.100e-3638.60Oryzain gamma chain (macronuclear) [Oxytricha trif... [more]
XP_023332087.12.800e-3635.84zingipain-2-like isoform X2 [Eurytemora affinis][more]
XP_023332086.12.800e-3635.84zingipain-2-like isoform X1 [Eurytemora affinis][more]
XP_013753329.16.200e-3634.98papain family cysteine protease containing protein... [more]
XP_009033689.11.100e-3535.46hypothetical protein AURANDRAFT_11974, partial [Au... [more]
XP_015662324.11.100e-3534.57putative cysteine proteinase [Leptomonas pyrrhocor... [more]
EPY25881.11.800e-3535.14cathepsin L [Strigomonas culicis] >EPY34685.1 cath... [more]
PRP82211.11.800e-3535.66hypothetical protein PROFUN_10420 [Planoprotosteli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001044NSK001044Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01730.1NO10G01730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO10G01730.2NO10G01730.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586275gene_4041Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01730.1NO10G01730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO10G01730.2NO10G01730.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01730 ID=NO10G01730|Name=NO10G01730|organism=Nannochloropsis oceanica|type=gene|length=2278bp
CTCTGACGCATGCAGAGGCCCTGTGCGGTGTGTGGTTTGGAACTGCGTAG
GTGTAGAAGTAAAGCGAAGGCACTGGCAGTTGTGCCAGCTTCCGAGACTC
ATGCCTGCTCGTTTTGAATGTCACAACACCACCACTACCACCACAAAGTC
TAGACGCCCTCAATTTACCCACGCAGACAGCATCAATGTAAAAGGTGATA
TTTACTGCAAGCCCCTATCTCATGCTTTTCGGTGCCATCTCGCGACCCAA
GCCTTTTCCCGCCTGCTGTGCCTTTTTGTTCCTTGACGCTGACCAACTGA
CTCGAACACAACCTACATTTACCAACAGTCACTGTCCGCTCCGATAATAT
TACAATGAAAGTCCTTGGTCTCTTCGTCGCCGCCGCGGTGGGTCTGCTGG
CCTGGTCAGACGCCGCTCTCGTCCGTGGAAGCAGCAAGGGCAAGCCTTAT
CAAGTGAACTCGAGCTCCCGCCTCTCGCTTGACCTGGAGCCCCAACACAA
TTATACCTTTGACCGCTACGTCGAAGAGTTTGGCAAAGAATACATTCCTG
GTTCGGAGGAATGGGAAAAGCGCAGGAACCTTTTCCTCAAGCGCAAGAAA
TCCATTCAGGCTCATAATGCTGCGCATCTCAATGGCAAGACGACCTTTCG
AAAGGGTGTGAACGAGTACGCCGATTGGACAGAGGCCGAGCTTCGGGGTA
TGCTGGGTTTCAAGCCCTCTGAGGAATGGCATCGCAAGCATCATTCTGGC
TCGGAGGTATTGTTAACTCTGATAGAGGGAGCGGGGAATGAGTCCGAGTT
GTCGGGGTTGCGCCAACAGGAGCGACTCTTGACCAACCTCCCCACCCATG
TGGACTGGCGCGAGAAAGGCGCGGTGACTAAGCCCAAGAACCAGGGGGCG
TGTGGGTCgtaagtatagtcgggggggggaagagggtcggggggccgtgt
cttgatgcttcatggacgccgtgtgccccccttacttgaaaagtgttttt
tgtaagagcgactcatctgtctctgtcttccttcctctttccctctttcc
gctacagCTGCTGGACCTTTTCGGGGGTCCAGGCCATCGAAAGTGCTCTC
TGGCTAAGCACCGGCAAGCTCTTCACATTGTCCGAGCAAGAATTTGTTTC
CTGTACTCCCAACCCTGACCACTGCGGGGGCACCGGCGGGTGCTATGGTG
CCACGCAAGATATTCTGTATGACTACGTGCTGGCCCAAGGGTTCTCTCTG
GAGCAAGATTATCCTTACGTAAGCGGGAATGGCACCGAGCCGATGTGCTT
GAGGCAGCCTTTGCACGTCGGCAGCATTGCGGGATACGTGGACGTGACAC
CTAATGATTTGGGGGCACATATGCTGGCAGTGAATAGCCAGCCATTGGCC
ATTTCTCTGGATGCATCAGAGTTTCATAACTACCACTCGGGAGTGTTGAC
GTTTGAGGTAGAGAGGGAGTGAGGAAGGAGGGAGGGAGTGGGGGGTAAGG
GAGGGAGGGGAGGAAAAGGAGGTATGTGGGAACATCAAGACAAGCACACT
TCATGGTAACTTCGACACACTTCATGTACCTTCTACATTCGGACATGACA
TTTTTGTAGCGATAGACATGTCTCAGCACTCGACAAGGTCGCTTATCCCT
CTGTCTCCTTCCCTTCTTTCCTCCCTCCTCGACTCCAAAACAGGACTGCG
GCGCTGACCTGAACCACGCCGTCCAGCTGGTAGGCTACGGCACAGACGAC
GAGACTGGACTCGATTATTTTCTCGTGCGCAACAGCTGGGGAAGGGCATG
GGGAGAGGACGGGTACATCCGGTTGGCACGCTCGGACAGATGTGCGGTGG
ATCAAACCCCTTTGGATGGGACGGGCTGCGAGGGTGGACCGGAGAAGCTG
ACGGTATGTGGCACGTGTGGCATGCTGTTTAGCTCGTCTTACCCTGTTGG
GGCCTTCTTGTTTGAAGATTAATATGTGGGTGGGGGAGAAGGGGAGGAGA
CGTGGGAGGCGGCAGCAGCAGCAACAGTACAGCAGCAACAGACGCAGCCG
CTGCGTCGCTCAAGTGTGTCGATACCAGAGAAATATCATTACATGAGCCT
CTTACATACCACAAGTGTAGAAAAAAAGGGAGAGACTGAGGAGGTGGTGA
AAGTGCCGATCTAGGAGGGGGGAAAGATAGCGAACTCAAAGGGGTGTGTG
TATTGAAGGTTGAGGTAGCTTAAGTTGGAGAGAGGAAAGAATAATAAAGA
GTGGAAGAAGGGACTGTAAAAAAATAAA
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protein sequence of NO10G01730.1

>NO10G01730.1-protein ID=NO10G01730.1-protein|Name=NO10G01730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=411bp
MKVLGLFVAAAVGLLAWSDAALVRGSSKGKPYQVNSSSRLSLDLEPQHNY
TFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRK
GVNEYADWTEAELRGMLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELS
GLRQQERLLTNLPTHVDWREKGAVTKPKNQGACGSCWTFSGVQAIESALW
LSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVLAQGFSLE
QDYPYVSGNGTEPMCLRQPLHVGSIAGYVDVTPNDLGAHMLAVNSQPLAI
SLDASEFHNYHSGVLTFEDCGADLNHAVQLVGYGTDDETGLDYFLVRNSW
GRAWGEDGYIRLARSDRCAVDQTPLDGTGCEGGPEKLTVCGTCGMLFSSS
YPVGAFLFED*
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protein sequence of NO10G01730.2

>NO10G01730.2-protein ID=NO10G01730.2-protein|Name=NO10G01730.2|organism=Nannochloropsis oceanica|type=polypeptide|length=323bp
MKVLGLFVAAAVGLLAWSDAALVRGSSKGKPYQVNSSSRLSLDLEPQHNY
TFDRYVEEFGKEYIPGSEEWEKRRNLFLKRKKSIQAHNAAHLNGKTTFRK
GVNEYADWTEAELRGMLGFKPSEEWHRKHHSGSEVLLTLIEGAGNESELS
GLRQQERLLTNLPTHVDWREKGAVTKPKNQGACGSCWTFSGVQAIESALW
LSTGKLFTLSEQEFVSCTPNPDHCGGTGGCYGATQDILYDYVLAQGFSLE
QDYPYVSGNGTEPMCLRQPLHVGSIAGYVDVTPNDLGAHMLAVNSQPLAI
SLDASEFHNYHSGVLTFEVERE*
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Synonyms
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