NO10G01440, NO10G01440 (gene) Nannochloropsis oceanica

Overview
NameNO10G01440
Unique NameNO10G01440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2558
Alignment locationchr10:421608..424165 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:421608..424165 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01440.1NO10G01440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01440.1NO10G01440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01440 ID=NO10G01440|Name=NO10G01440|organism=Nannochloropsis oceanica|type=gene|length=2558bp
GGGGAGGGGAGAGGCAGATAAAGGTGGCGAAAAAGACCGAGTAGTTTATA
TTTTGGAAAGAGGGCTGTATTTAATACGGCAGAGAAAATAATGCAGAGAA
AGAGGAATGCGAGAAGTGAGTGAGTGTCAAGGAAAGCGTATCACAAAGAA
ACCCCTGCCAGGAAACGTCAGCTGAAAATAGGCCGTATTTGATATTTCTC
TTTTTTGCTTGTCCTACAAAAAGTGCTAATGCGTTTGCCTTTGTGACCTC
ATCGGTCTCTCCCAACATCACATCCAAGCTGACATCATTTTATTTCCGAT
GGTCAAAGCCCATCTTTAAGCCGAAAATTCATTGCTTGGGACGCTGCCTA
CTCACTGTACTTGTTGCGAAAGTCAGTCAGGTCTGCAGAGGACAAGCTCG
TCTCTCTATATGTTGCTGGCCTCTTACTTCTTTGCCATCTTTTCCAAACC
CAAATGTGTCTCGGAGTCACTCACCAATCGCCACTTTCCCTCCCCGTCCT
CCTCCGCGCTCAGAGGCACCCGGTCCAATAACTGCACAACCCGATACATC
GACCCATCAAACTCGACGTCACAAATTGGATCAACCCTCACACTGTTCTC
CCCCCTTGCAGCCGCGGACCGGGCCGCCTGTGCAGCTACCTCCCCAGCGT
CCTCTTCTTCCTCGTCCTCGCTGTCGTATTCGTCGTCACTGTCAACATCA
TCCTCGTCCACCACATCATCATCATCGAACCAATCCGGATCCCCCGCGAT
GGTCAAAAATCCCGCAGTATGGAGAATTTCATAACCCTTATTCGTAAAAT
AATCGTCCAGCTGGTAAAACATCTTCTCCGCTAATTCATCCGAAGGGTCA
ATGGGCCGCCCCCCCGAGTCCATCAAAACCATCGGGCTATCCACCGGCGT
CCCCAAGCAGTACCGCTTACCGTCCTGCTTAAGGAATGCCAGCATCGTTG
TATTGATGCTCCGTCCTGATGCATCTTCCATCAAGACGTACTCGGGCTTC
TTTCCTGCCAAGGCCTCAACCACGGGCTCGGCTGTCGCAGCCATGACTGC
AGCCGAGGCACGGAGGGGCGATACGGCACTGGCAGGGGACGGGACCAGGA
AACCACTGACGAGGCTGCAGGACAGCAAACTGATCAACATATTTAATTTC
ATCGTCAGCAGGTATATAGCTGCGCAGAACTGGGGCTGGGTGGCTCTTGT
GGCGTATGGAATGCGGGAGGAATGGGAGGAGCAGTCGAGTATCCTTCAAA
ATATGTGGCGAGGCGTGCTTTAGTGGCAATTGGGACGCCTGTGCCATGCA
TGCGAGGAACAGGCGAAGAGCGTGAACATGAGAATGGACTCTGAACGAGG
TAAGATGGCAGCAGATAGCATGGTGGTGGCTAAGTAAGAGGGACGAAGCA
AGGAGTCGGAATTGCAAGCACCCTGGCGCTTGCGCTCGCCTTCAACCCGC
GATCTGAGCAAGAGTCGTTACGATGCCTCAATTTCACCACTGAGACAACA
ACTTTTCAGTACAGACAGCACATCTTCAACAGGCAACTACGTACAGGATC
AATAGTAATTGTACCGCCTTGTTGCAGGACCTAGAAGATGGAAAGGgtac
gtttaactcatatattttgtttgagggagtattagttctagttctttttt
tctgccgtctgccgttgctacactcctatagaactatcgcatgcaacctg
acgtcctctaggacttgcatacgagtacttttttggggggagtattaagc
ttatctgccaaattgtgtgtggtaggcctgtcacgctggtacctcctttc
cttgatttttattccctttccgaaatcaattagAGCTTTTGGCAAAAGGA
AGAAAGGCATATTTTTGATGCTTATGGAAGGGAGCTGGCCGAGGCCAGGG
CCCAGGTCCTAGCTGCTTCCGCCTGCGCCGCTTCCTTCGCGGCAGCATCT
TCGGCCTGCGACGATGTTGACTATGACCCCGGCAACGCAGACGCCGACTG
GGCAGGCATCGTGAAAAAGCGAGGACGAAAAGTCCATTTTCCTCTGACGC
AAAAATCTGTCTTGATCGCACACCATTTAGCGGGGTTAACAGATGCCTCG
TCCTCATCCTCGTCGTCGTCCTTGACCTCATCCCGACAGCGGGCACCCGC
ATCCAGAGGCCATAACACCACCTCTTTCGTAATCGGCGGGGTCGACGCTC
CAGTGCCATCTAATTGGGCAACGAGCTACCAGGCTCAAGTTGAGGGTACG
CCCACGCCAGAAGAAATGATGGATCCCCTACGGCTGCGCTCCAAAAAGAA
GGCAGGCGTGCAGCAGCAGGAGCTACAGGAGCTGCAGCGGGGTGGAACGG
AGATGGAGTCGCATGCGACTACATCAGCGCGTCAAGGAGGAGATGAGGAA
GTAAATGACCGCAACACTCTAATTGGGTACCGGGCTCCACCCATATTTCG
AGGCAAAGCGTCGTTCTTGGTGGGGATTGGCAAAAAGCTGCATAAAGAGC
AGAGTTTAATAGAAAGGAAGAATCATTGAAAGCTAAAAACAACGATGAAG
TATAAGCA
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protein sequence of NO10G01440.1

>NO10G01440.1-protein ID=NO10G01440.1-protein|Name=NO10G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=235bp
MERSFWQKEERHIFDAYGRELAEARAQVLAASACAASFAAASSACDDVDY
DPGNADADWAGIVKKRGRKVHFPLTQKSVLIAHHLAGLTDASSSSSSSSL
TSSRQRAPASRGHNTTSFVIGGVDAPVPSNWATSYQAQVEGTPTPEEMMD
PLRLRSKKKAGVQQQELQELQRGGTEMESHATTSARQGGDEEVNDRNTLI
GYRAPPIFRGKASFLVGIGKKLHKEQSLIERKNH*
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Synonyms
Publications