NO10G01210, NO10G01210 (gene) Nannochloropsis oceanica

Overview
NameNO10G01210
Unique NameNO10G01210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2814
Alignment locationchr10:359172..361985 +

Link to JBrowse

Properties
Property NameValue
DescriptionSporulation protein rmd1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:359172..361985 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003734DUF155
Homology
BLAST of NO10G01210 vs. NCBI_GenBank
Match: EWM25381.1 (sporulation protein rmd1 [Nannochloropsis gaditana])

HSP 1 Score: 619.8 bits (1597), Expect = 8.500e-174
Identity = 401/586 (68.43%), Postives = 434/586 (74.06%), Query Frame = 0
Query:    1 MSSSPPIIHDDAALSPPYQGYSKKHGSDDFSVATSDAEEGLRRRGSLEGLGLDLDGGHTSSPTAPSSSTTSSLMRQTAYQASGYHSDSAIPSYSHISPDRRRSMGSREMLDPAAEPLMGTDNXXXXXXXXXXXXXSRRPSMDMGEVSCDDTHGRSRQAMLDFDKFRSSMEDWVEPRKSRWNRKVTRKRAKRPTTAVRKGRLAVYCVASELQTDQVLRYLLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVK------RNLMKRVE------------------DTSALVGLNWRDKNYMGVVYTTNDDGKCDPLEVKHIFCFPYGCTVFWGCTKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLSSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVSRREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDLPNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQVLEIALNDLLHLDR 563
            MSSSPP +H  A  S PY  Y+  H  D  SV   DAE                                         Q SGYHSDSAIP+ SH++P+RRR   SREMLDPAAEPL+GTD                 PSM+ G  S +D +G + Q+MLDFD+FRS +E+WV+PRK RWNRKVTRK+ K+PT AVRKGRLAVYC+ASELQTDQ+ RYLLQ                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         ++ ++                     DTS LVGLNWRDKN+MGV+YTT+DDGKCDPLEVKHIFCFPYGCTVFWGCTKEEEE FISML PFAVE VS MEREES+DDF Y YG SP ILHYEITL+SNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGK NVSR+EISKLTGKVFLERNE+NLHSDILDTPEWFWEADLWEPRYV  CKYLDLPNR+NILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQVLEIALNDLLHL+R
Sbjct:    1 MSSSPP-VHYGATASLPYSDYN--HEDDYLSV---DAE--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXQTSGYHSDSAIPTQSHMTPNRRRRTSSREMLDPAAEPLIGTDIDESDRERDGRHHHLHSPSMNHGRESYEDGNGFAVQSMLDFDQFRSPLEEWVQPRKPRWNRKVTRKKTKKPTIAVRKGRLAVYCIASELQTDQIQRYLLQRKKEMVPVDKGGHKGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSHIAARCKSFLRATANAAVSGVKAAPPSQSAKVDTSDLVGLNWRDKNFMGVIYTTDDDGKCDPLEVKHIFCFPYGCTVFWGCTKEEEERFISMLTPFAVELVSDMEREESYDDFAYFYGSSPQILHYEITLTSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKTNVSRKEISKLTGKVFLERNEINLHSDILDTPEWFWEADLWEPRYVGLCKYLDLPNRVNILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQVLEIALNDLLHLNR 566          
BLAST of NO10G01210 vs. NCBI_GenBank
Match: GAX94881.1 (Hypothetical protein PINS_002761 [Pythium insidiosum])

HSP 1 Score: 236.9 bits (603), Expect = 1.600e-58
Identity = 134/259 (51.74%), Postives = 171/259 (66.02%), Query Frame = 0
Query:  311 WRDKNYMGVVYTT--------NDDGKCDPL--EVKHIFCFPYGCTVFWGCTKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLSSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVSRREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDLPNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQ-VLEIALNDLL 559
            W  K YMG +++T        +DD    PL    K +F F  GCTVFWG T+ EE+  +  L  F+V PV  +E E    D  Y YGD   I++  ITLSSN   EKLA+SF++AQSAKL VFE+RV+ TI  TKHIP +LA  G I  S+ +ISKL G++F+ERN+VNL+SD+LD P++FWE D +EP Y    KYLD+ NR+ ILN RLDILRELL+VL  QL + H TKLE IVI LI+ EV +Q V  I + D+L
Sbjct:  210 WSHKMYMGAIHSTCAPPRVDSDDDDALVPLAYRQKDVFYFGTGCTVFWGLTRAEEQAHLRALAAFSVGPVKQVEVE----DMDYTYGDVSRIVNDAITLSSNRASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIQYSQSDISKLIGRLFIERNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVAILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVAVQLVWNILIKDIL 464          
BLAST of NO10G01210 vs. NCBI_GenBank
Match: XP_008905683.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >XP_008905684.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >XP_008905685.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETI46845.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETI46846.1 hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETI46847.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETL93332.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL93333.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL93334.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM46596.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM46597.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM46598.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN09122.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETN09123.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETN09124.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETP16633.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP16634.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP16635.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >ETP44697.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297] >ETP44698.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297] >ETP44699.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297] >KUF83864.1 Sporulation protein RMD1 [Phytophthora nicotianae])

HSP 1 Score: 232.3 bits (591), Expect = 3.800e-57
Identity = 126/255 (49.41%), Postives = 171/255 (67.06%), Query Frame = 0
Query:  311 WRDKNYMGVVYTT------NDDGKCDPLEVKHIFCFPYGCTVFWGCTKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLSSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVSRREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDLPNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQVL-EIALNDLL 559
            WR K YMG ++++      +++G   P + K  F F  GC VFWG T+ EE+  +  L  F+V PV  +E E    D  Y YGD+ +I +  ITLSSN   EKLA+SF++AQS+KL VFE+RV+ TI  TKH+P +LA  G I  S+ +ISKL G++F+ER++VNL+SD+LD P++FWE D +EP Y    KYL + NR+ ILN RLDILREL  VL  QL + H TKLE+IVI LI+ EV +QV+  I + D+L
Sbjct:  187 WRHKMYMGAIHSSCAPAPNHEEGARVPYQQKDAFYFATGCAVFWGLTRAEEQAHLVALGAFSVGPVKQVEVE----DMDYTYGDASLICNDAITLSSNRASEKLAVSFAMAQSSKLDVFEERVEETIRETKHVPQNLAATGSIQYSQSDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKVMKYLSVDNRVQILNTRLDILRELXXVLSQQLAHQHDTKLEMIVIWLIVAEVAVQVVWNILIKDIL 437          
BLAST of NO10G01210 vs. NCBI_GenBank
Match: ETK86774.1 (hypothetical protein, variant 1 [Phytophthora parasitica] >ETK86775.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETK86776.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL40189.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL40190.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL40191.1 hypothetical protein, variant 3 [Phytophthora parasitica])

HSP 1 Score: 232.3 bits (591), Expect = 3.800e-57
Identity = 126/255 (49.41%), Postives = 171/255 (67.06%), Query Frame = 0
Query:  311 WRDKNYMGVVYTT------NDDGKCDPLEVKHIFCFPYGCTVFWGCTKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLSSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVSRREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDLPNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQVL-EIALNDLL 559
            WR K YMG ++++      +++G   P + K  F F  GC VFWG T+ EE+  +  L  F+V PV  +E E    D  Y YGD+ +I +  ITLSSN   EKLA+SF++AQS+KL VFE+RV+ TI  TKH+P +LA  G I  S+ +ISKL G++F+ER++VNL+SD+LD P++FWE D +EP Y    KYL + NR+ ILN RLDILREL  VL  QL + H TKLE+IVI LI+ EV +QV+  I + D+L
Sbjct:  187 WRHKMYMGAIHSSCAPAPNHEEGARVPYQQKDAFYFATGCAVFWGLTRAEEQAHLVALGAFSVGPVKQVEVE----DMDYTYGDASLICNDAITLSSNRASEKLAVSFAMAQSSKLDVFEERVEETIRETKHVPQNLAATGSIQYSQSDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKVMKYLSVDNRVQILNTRLDILRELXXVLSQQLAHQHDTKLEMIVIWLIVAEVAVQVVWNILIKDIL 437          
BLAST of NO10G01210 vs. NCBI_GenBank
Match: XP_002905381.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68222.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 232.3 bits (591), Expect = 3.800e-57
Identity = 126/255 (49.41%), Postives = 170/255 (66.67%), Query Frame = 0
Query:  311 WRDKNYMGVVYTT------NDDGKCDPLEVKHIFCFPYGCTVFWGCTKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLSSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVSRREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDLPNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQVL-EIALNDLL 559
            WR K YMG ++++      +++G   P   K  F F  GC VFWG T+ EE+  +  L  F+V PV  +E E    D  Y YGD+ +I +  ITLSSN   EKLA+SF++AQS+KL VFE+RV+ TI  TKH+P +LA  G I  S+ +ISKL G++F+ER++VNL+SD+LD P++FWE D +EP Y    KYL + NR+ ILN RLDILREL  VL  QL + H TKLE+IVI LI+ EV +QV+  I + D+L
Sbjct:  190 WRHKMYMGAIHSSCAPAPDHEEGSRAPYHQKDAFYFATGCAVFWGLTRAEEQAHLVALGAFSVGPVKQVEVE----DMDYTYGDASLICNDAITLSSNRASEKLAVSFAMAQSSKLDVFEERVEETIRETKHVPQNLAATGSIQYSQSDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKVMKYLSVDNRVQILNTRLDILRELXXVLSQQLAHQHDTKLEMIVIWLIVAEVAVQVVWNILIKDIL 440          
BLAST of NO10G01210 vs. NCBI_GenBank
Match: CCA21430.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 231.5 bits (589), Expect = 6.500e-57
Identity = 129/257 (50.19%), Postives = 170/257 (66.15%), Query Frame = 0
Query:  311 WRDKNYMGVVY------TTNDDGKCDPLEV--KHIFCFPYGCTVFWGCTKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLSSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVSRREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDLPNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQVL-EIALNDLL 559
            WR K YMG ++      T   D    P E   K +F F  GCTVFWG ++ EE+  +  L+ F++ PV  +E E    D  Y+YGDS  I++  ITLSSN   EKLA+SF++AQSAKL VFE+RV+ TI  TKHIP +LA  G I+ S+ +ISKL G++F+ERN+VNL+SD+LD P++FWE D +EP Y    KYLD+ NR+ ILN RLDILRE       QL + H TKLE IVI LI+ EVV+Q++  I + D+L
Sbjct:  213 WRHKMYMGAIHSSIAPLTDKRDQSSLPAEYEQKDVFYFATGCTVFWGLSRAEEQEHLRALISFSMGPVKQVEVE----DMDYVYGDSNRIVNDAITLSSNCASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIHYSQNDISKLIGRLFIERNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVQILNTRLDILREXXXXXSQQLAHQHDTKLEWIVIWLIVAEVVVQIVWNILIKDIL 465          
BLAST of NO10G01210 vs. NCBI_GenBank
Match: CCI49300.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 230.3 bits (586), Expect = 1.500e-56
Identity = 122/236 (51.69%), Postives = 161/236 (68.22%), Query Frame = 0
Query:  311 WRDKNYMGVVYTT--------NDDGKCDPLEVKHIFCFPYGCTVFWGCTKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLSSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVSRREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDLPNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVI 539
            WR K YMG ++++        +        E K +F F  GCTVFWG T+ EE+  +  L+ F++ PV  +E E    D  Y+YGDS  I++  ITLSSN   EKLA+SF++AQSAKL VFE+RV+ TI  TKHIP +LA  G I+ S+ +ISKL G++F+ERN+VNL+SD+LD P++FWE D +EP Y    KYLD+ NR++ILN RLDILRELL+VL  QL + H TKLE IVI
Sbjct:  199 WRHKMYMGAIHSSIAPLADRRDQSSLPTEYEQKDVFYFATGCTVFWGLTRAEEQEHLRALIGFSMGPVKQVEVE----DMDYVYGDSNRIVNDAITLSSNCASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIHYSQNDISKLIGRLFIERNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVHILNTRLDILRELLDVLSQQLAHQHDTKLEWIVI 430          
BLAST of NO10G01210 vs. NCBI_GenBank
Match: CCI49301.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 230.3 bits (586), Expect = 1.500e-56
Identity = 122/236 (51.69%), Postives = 161/236 (68.22%), Query Frame = 0
Query:  311 WRDKNYMGVVYTT--------NDDGKCDPLEVKHIFCFPYGCTVFWGCTKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLSSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVSRREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDLPNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVI 539
            WR K YMG ++++        +        E K +F F  GCTVFWG T+ EE+  +  L+ F++ PV  +E E    D  Y+YGDS  I++  ITLSSN   EKLA+SF++AQSAKL VFE+RV+ TI  TKHIP +LA  G I+ S+ +ISKL G++F+ERN+VNL+SD+LD P++FWE D +EP Y    KYLD+ NR++ILN RLDILRELL+VL  QL + H TKLE IVI
Sbjct:  193 WRHKMYMGAIHSSIAPLADRRDQSSLPTEYEQKDVFYFATGCTVFWGLTRAEEQEHLRALIGFSMGPVKQVEVE----DMDYVYGDSNRIVNDAITLSSNCASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIHYSQNDISKLIGRLFIERNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVHILNTRLDILRELLDVLSQQLAHQHDTKLEWIVI 424          
BLAST of NO10G01210 vs. NCBI_GenBank
Match: XP_024581414.1 (Uncharacterized conserved protein [Plasmopara halstedii] >CEG45045.1 Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 229.6 bits (584), Expect = 2.500e-56
Identity = 125/255 (49.02%), Postives = 169/255 (66.27%), Query Frame = 0
Query:  311 WRDKNYMGVVY------TTNDDGKCDPLEVKHIFCFPYGCTVFWGCTKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLSSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVSRREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDLPNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQVL-EIALNDLL 559
            W+ K YMG ++      T ++DG     + K  F F  GC VFWG T+ EE+  +  L  F+V PV  +E E    D  Y YGD+ +I +  ITL SN   EKLA+SF++AQS+KL VFE+RV+ TI +TKH+P +LA  G I  S+ +ISKL G++F+ER++VNL+SD+LD P++FWE D +EP Y    KYL + NR+ ILN RLDILREL  VL  QL + H TKLE+IVI LI+ EV +QV+  I + D+L
Sbjct:  188 WKHKMYMGAIHSSCAPATDHEDGSPVSYQQKDAFYFATGCAVFWGLTRAEEQAHLVALGAFSVGPVKQVEVE----DMDYTYGDASLICNDAITLRSNRASEKLAISFAMAQSSKLDVFEERVEETIRATKHVPQNLAATGSIQYSQSDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKVMKYLSVDNRVQILNTRLDILRELXXVLSQQLAHQHDTKLEMIVIWLIVAEVAVQVVWNILIKDIL 438          
BLAST of NO10G01210 vs. NCBI_GenBank
Match: GAY02115.1 (Hypothetical protein PINS_009950, partial [Pythium insidiosum])

HSP 1 Score: 228.0 bits (580), Expect = 7.200e-56
Identity = 123/255 (48.24%), Postives = 169/255 (66.27%), Query Frame = 0
Query:  304 SALVGLNWRDKNYMGVVYTTND---------DGKCDPLEVKHIFCFPYGCTVFWGCTKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLSSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVSRREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDLPNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQV 550
            SAL    WR+K YMGVV+++ D         D + D L+ K  F F  GC VFWG +++EE + +  L  F+  PV+ +E E    D  ++YGDS  + + EITLSS   EEKLA+SF+++QSAKL VFE+RV+  I +TKHIP +LA  G +  S+ +ISKL G++F+E  +VNLHSDILD P++ WE D +EP +    KYLD+ NR+ ILNKRLDILREL+ VL  +L   H  KLE I+I L++ E+V+ V
Sbjct:  209 SALRLAGWRNKMYMGVVHSSFDPARDANAPRDDERDLLQRKDAFYFATGCCVFWGLSRDEELVHLQALGAFSTGPVAEIEAE----DMEFVYGDSSRVANDEITLSSETVEEKLAISFAMSQSAKLDVFEERVEQRIRNTKHIPFNLATTGSMQYSQTDISKLIGQLFIELADVNLHSDILDEPDFLWEHDEYEPLHKKMLKYLDVNNRVKILNKRLDILRELVEVLNQELAQKHGAKLEWIIIWLLVAEIVIAV 459          
The following BLAST results are available for this feature:
BLAST of NO10G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25381.18.500e-17468.43sporulation protein rmd1 [Nannochloropsis gaditana... [more]
GAX94881.11.600e-5851.74Hypothetical protein PINS_002761 [Pythium insidios... [more]
XP_008905683.13.800e-5749.41hypothetical protein, variant 1 [Phytophthora para... [more]
ETK86774.13.800e-5749.41hypothetical protein, variant 1 [Phytophthora para... [more]
XP_002905381.13.800e-5749.41conserved hypothetical protein [Phytophthora infes... [more]
CCA21430.16.500e-5750.19conserved hypothetical protein [Albugo laibachii N... [more]
CCI49300.11.500e-5651.69unnamed protein product [Albugo candida][more]
CCI49301.11.500e-5651.69unnamed protein product [Albugo candida][more]
XP_024581414.12.500e-5649.02Uncharacterized conserved protein [Plasmopara hals... [more]
GAY02115.17.200e-5648.24Hypothetical protein PINS_009950, partial [Pythium... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000991NSK000991Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01210.1NO10G01210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586531gene_4096Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100005g130gene5152Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01210.1NO10G01210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01210 ID=NO10G01210|Name=NO10G01210|organism=Nannochloropsis oceanica|type=gene|length=2814bp
GTGAAAGACTCTCATCGGATGATCCCCGAGTTTTGAAGGACACGCTGTCA
CCCACCCACCTGCAGCCACACTGTTGTCGAGCGCTGCTCATCCCAACCAA
ACCATGCCATCAGTAATTTGACATGACAGTCTTGTGGGTACCGGGGCATG
GCGTTGCGTCCTCTTTTGAAGCCAAGAGAGTTGCTGCACACCCATTTGCC
CCCTCCCCTTCCTCTACTCGGACACGCACCAGTCTACATCGCTGCCCTGC
CCTGCCCTTGACGTCTGGCCGTCACCACCATCAGCGTCCTCTAAATGGTT
CCAGGGGCTCTGGCTTCCACCTTGCCTATGGACGTGCACCAACCCTCATT
CCTGTCCCTCTTATGCTACACCCTACATCCAACACAGGGAAGGAGAGGAC
GAGGAGTAGAGAGCACGCCCGCCTGCTAGCTGACACAAAACAGCAAGCAG
CAGCGGCCAAGCAAGCAACGTTGTTTACTTCTTTATTATTCGTATTCATT
CAGCCACAGTATCAATCATTGCGACGCCCACCAAAAACTCCCCTCCCAAG
CAACCCCTCTCGCACCCTCACCTTTTACCCTCCAGCAGCATCGAAATGTC
CTCTTCTCCCCCCATCATCCACGACGACGCTGCACTCTCTCCACCTTATC
AAGGGTACAGCAAGAAACATGGCTCAGACGACTTTAGCGTCGCTACCTCA
GATGCCGAAGAAGGCCTCAGGCGCAGGGGCAGCCTTGAGGGCCTTGGACT
AGATCTTGACGGAGGGCACACGTCGTCACCGACTGCTCCTTCCTCCTCCA
CGACCTCCTCGCTCATGCGCCAAACGGCGTATCAAGCCTCGGGATACCAC
TCAGACAGTGCGATTCCGAGTTATTCTCACATCAGTCCTGATCGAAGGAG
GAGCATGGGTTCGAGGGAGATGCTTGATCCGGCAGCAGAGCCCCTGATGG
GGACGGACAATGATGAGAGCGACAGGGAGCGGGAAAGGCATCACCACTAT
TCGCGTAGGCCGTCGATGGATATGGGGGAAGTGAGCTGTGATGATACTCA
TGGGAGGTCAAGGCAGGCGATGCTGGACTTTGATAAGTTCCGGAGTTCGA
TGGAAGACTGGGTGGAACCGAGAAAATCGCGATGGAACAGGAAGGTGACA
AGGAAAAGGGCGAAGAGGCCCACAACGGCAGTGAGGAAGGGACGGTTGGC
TGTTTATTGTGTGGCAAGTGAGTTGCAGACGGATCAGGTGCTCCGGTATT
TGTTGCAACGGAAGAAGGAGAAGGTTCTCCCGGGGGGGGAGGGGAGGGAG
GAGGAGGAGGAGGAGGAGGACGAGGGGGGGATATTACGgtacaaacgggg
gaaatggtggggggggggatctatattcttctttcgcgccgcctgcacct
cccaccttgagCACAACGAATTCGAGTTCGTTGTTGCTGCCGATGCTGAG
GGGGGGGAAGAGCAATAGCAGCAGCGGAGGGGTGGGGGCGGCAGTGACAG
GCGGTGGCAGCAGCGCGGGCTGTACCGGAGGAAGGGAGGAGGTAAAGAGG
AACTTGATGAAAAGGGTGGAGGACACCTCGGCTCTGGTCGGTCTAAATTG
GCGCGACAAGAACTACATGgtacggagagagggagggagggagggaggaa
ggaagggagggagagagggaggaaaggaggaaggaagggagggagggggg
gagatggattcatttgtttgtgtcggacgaagagattatgatagatcgtg
tgtgctcgagcttgattatttgtcacgatagtcatacagagttgcctcgc
tttccccttcggtcttgtgtctcaccccttcctcctgcccttcctccttc
cctccctccctcttttccaccaacacagGGCGTGGTGTACACCACGAACG
ACGATGGTAAGTGCGACCCTTTGGAAGTGAAGCACATCTTCTGTTTCCCT
TACGGTTGCACGGTTTTCTGGGGCTGCACCAAGGAGGAGGAAGAGCTCTT
CATATCCATGCTTCTCCCGTTCGCCGTCGAGCCCGTCTCAGTCATGGAGC
GGGAGGAGAGCCACGATGATTTTGTGTACCTTTACGGGGACTCTCCCATG
ATCCTTCACTATGAAATCACCCTCTCGAGCAACGACCCGGAGGAGAAGTT
GGCGTTGAGTTTCTCCCTGGCCCAGAGCGCGAAGCTGTTCGTGTTCGAAG
ACCGCGTCGACGGGACCATCACCAGCACCAAGCACATCCCGATCCACCTG
GCGGAGTTCGGGAAGATCAACGTGAGCCGGCGGGAGATATCCAAATTGAC
GGGGAAGGTCTTCTTGGAGCGGAATGAAGTCAACCTCCACTCGGACATCC
TTGACACCCCCGAATGGTTTTGGGAGGCGGATCTGTGGGAGCCGCGGTAT
GTGGCTTTCTGCAAGTATCTGGATTTGCCGAACCGGATAAACATTTTGAA
TAAACGGTTGGACATCCTGAGAGAGTTGCTTAATGTGCTCGAGACGCAAC
TGGATAACTCCCACTCCACGAAGgtggggaaggaagggagggaggaaggg
agggaggcagagggggtgggggatcctcatcaaaacttcacaacccatct
tcccctcccccccgtttcttttcataactattgccttctcccgttgatac
tcactcatcttgacgataaatttcacgtctcctcattctttccccccccc
ttccccccacagCTGGAATTGATTGTCATCGCCCTCATTATCGTGGAGGT
GGTGTTGCAGGTGCTTGAGATCGCCTTGAATGACCTCTTGCACCTGGACA
GGTATCAGTACTAA
back to top

protein sequence of NO10G01210.1

>NO10G01210.1-protein ID=NO10G01210.1-protein|Name=NO10G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=566bp
MSSSPPIIHDDAALSPPYQGYSKKHGSDDFSVATSDAEEGLRRRGSLEGL
GLDLDGGHTSSPTAPSSSTTSSLMRQTAYQASGYHSDSAIPSYSHISPDR
RRSMGSREMLDPAAEPLMGTDNDESDRERERHHHYSRRPSMDMGEVSCDD
THGRSRQAMLDFDKFRSSMEDWVEPRKSRWNRKVTRKRAKRPTTAVRKGR
LAVYCVASELQTDQVLRYLLQRKKEKVLPGGEGREEEEEEEDEGGILRTT
NSSSLLLPMLRGGKSNSSSGGVGAAVTGGGSSAGCTGGREEVKRNLMKRV
EDTSALVGLNWRDKNYMGVVYTTNDDGKCDPLEVKHIFCFPYGCTVFWGC
TKEEEELFISMLLPFAVEPVSVMEREESHDDFVYLYGDSPMILHYEITLS
SNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKINVS
RREISKLTGKVFLERNEVNLHSDILDTPEWFWEADLWEPRYVAFCKYLDL
PNRINILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQVL
EIALNDLLHLDRYQY*
back to top
Synonyms
Publications