NO10G01180, NO10G01180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G01180 vs. NCBI_GenBank
Match: CBI15579.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 227.6 bits (579), Expect = 6.800e-56 Identity = 110/236 (46.61%), Postives = 155/236 (65.68%), Query Frame = 0 Query: 171 ITLYQYKICPFCCKVKAVLDYYKIPYETMDVNPLTKAEIKFSADYRKVPIARIGDEVVIDSSIIVGKIMDLLRAAHVAPAKELDAFFAPEATRWAEWADMELAVLLFPNITRTFGESYQAFSYVKDVPHFSMLDKLTNQWIGATAMWAAQGKIKKKYNITDERAALFAALETWSSEVGNKPFLSGSTPNVGDLCVYACIRAIEGLDAHKDLLANTGIGPWYTRVEHAIGASSCVHA 407 + LYQY+ CPFC KVKA LDYY IPY+ ++VNPL+K EIK+S DY+KVPI + DE ++DSS I+ K+ D + P K D+ E +W +W D L +L PNI R+ E+ ++F Y+ +FS +KLT ++ GA AM+ K+KK++NITDERAAL+ A ETW + + FL GS PN+ DL V+ +R I L + +D++ NT IG WYTR+E+A+G SS + A Sbjct: 106 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPLSKREIKWS-DYKKVPILMVNDEQLVDSSAIIDKMSD-----KILPKKSADSASDDEERKWRQWVDNHLVHVLSPNIYRSTSEALESFDYITSNGNFSFTEKLTVKYAGAAAMYFVSKKLKKRHNITDERAALYEAAETWVDGLNGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVENTRIGEWYTRMENAVGESSRIKA 335
BLAST of NO10G01180 vs. NCBI_GenBank
Match: ETI46550.1 (hypothetical protein F443_09065 [Phytophthora parasitica P1569] >ETL93032.1 hypothetical protein L917_08726 [Phytophthora parasitica]) HSP 1 Score: 226.5 bits (576), Expect = 1.500e-55 Identity = 108/233 (46.35%), Postives = 150/233 (64.38%), Query Frame = 0 Query: 171 ITLYQYKICPFCCKVKAVLDYYKIPYETMDVNPLTKAEIKFSADYRKVPIARIGDEVVIDSSIIVGKIMDLLRAAHVAPAKELDAFFAPEATRWAEWADMELAVLLFPNITRTFGESYQAFSYVKDVPHFSMLDKLTNQWIGATAMWAAQGKIKKKYNITDERAALFAALETWSSEVGNK-PFLSGSTPNVGDLCVYACIRAIEGLDAHKDLLANTGIGPWYTRVEHAIGASS 403 + LYQY+ CP+CCKVKAVLDY KIPYE ++VNPLTK E K DYRKVP+ RI DEVV+DSS I+ ++ +L+ A ++E E W +W D +L +L PNI RT E+ QAF Y F+ +++ +++ GA M+ + KKKYNI DER AL++AL +W +G+K PFL G PN+ DL V+ +RA+ GLD + D++ T I PW+TR+ +G SS Sbjct: 106 VVLYQYEPCPYCCKVKAVLDYLKIPYEVVEVNPLTKKETKAFTDYRKVPVVRINDEVVVDSSAIISRLRELVEVPKDAQSEEA----LKEEEEWRQWVDKKLILLTPPNIYRTVPEALQAFDYCLTEGKFTPMERRMSKYAGAVIMYLIAKRSKKKYNIDDEREALYSALNSWVDAIGDKRPFLGGDEPNMADLSVFGVLRAMHGLDTYNDMMRETNIEPWFTRMTAKVGPSS 334
BLAST of NO10G01180 vs. NCBI_GenBank
Match: ETK86490.1 (hypothetical protein L915_08882 [Phytophthora parasitica] >ETL39904.1 hypothetical protein L916_08805 [Phytophthora parasitica]) HSP 1 Score: 226.5 bits (576), Expect = 1.500e-55 Identity = 108/233 (46.35%), Postives = 150/233 (64.38%), Query Frame = 0 Query: 171 ITLYQYKICPFCCKVKAVLDYYKIPYETMDVNPLTKAEIKFSADYRKVPIARIGDEVVIDSSIIVGKIMDLLRAAHVAPAKELDAFFAPEATRWAEWADMELAVLLFPNITRTFGESYQAFSYVKDVPHFSMLDKLTNQWIGATAMWAAQGKIKKKYNITDERAALFAALETWSSEVGNK-PFLSGSTPNVGDLCVYACIRAIEGLDAHKDLLANTGIGPWYTRVEHAIGASS 403 + LYQY+ CP+CCKVKAVLDY KIPYE ++VNPLTK E K DYRKVP+ RI DEVV+DSS I+ ++ +L+ A ++E E W +W D +L +L PNI RT E+ QAF Y F+ +++ +++ GA M+ + KKKYNI DER AL++AL +W +G+K PFL G PN+ DL V+ +RA+ GLD + D++ T I PW+TR+ +G SS Sbjct: 89 VVLYQYEPCPYCCKVKAVLDYLKIPYEVVEVNPLTKKETKAFTDYRKVPVVRINDEVVVDSSAIISRLRELVEVPKDAQSEEA----LKEEEEWRQWVDKKLILLTPPNIYRTVPEALQAFDYCLTEGKFTPMERRMSKYAGAVIMYLIAKRSKKKYNIDDEREALYSALNSWVDAIGDKRPFLGGDEPNMADLSVFGVLRAMHGLDTYNDMMRETNIEPWFTRMTAKVGPSS 317
BLAST of NO10G01180 vs. NCBI_GenBank
Match: ETM46330.1 (hypothetical protein L914_08755 [Phytophthora parasitica]) HSP 1 Score: 226.5 bits (576), Expect = 1.500e-55 Identity = 108/233 (46.35%), Postives = 150/233 (64.38%), Query Frame = 0 Query: 171 ITLYQYKICPFCCKVKAVLDYYKIPYETMDVNPLTKAEIKFSADYRKVPIARIGDEVVIDSSIIVGKIMDLLRAAHVAPAKELDAFFAPEATRWAEWADMELAVLLFPNITRTFGESYQAFSYVKDVPHFSMLDKLTNQWIGATAMWAAQGKIKKKYNITDERAALFAALETWSSEVGNK-PFLSGSTPNVGDLCVYACIRAIEGLDAHKDLLANTGIGPWYTRVEHAIGASS 403 + LYQY+ CP+CCKVKAVLDY KIPYE ++VNPLTK E K DYRKVP+ RI DEVV+DSS I+ ++ +L+ A ++E E W +W D +L +L PNI RT E+ QAF Y F+ +++ +++ GA M+ + KKKYNI DER AL++AL +W +G+K PFL G PN+ DL V+ +RA+ GLD + D++ T I PW+TR+ +G SS Sbjct: 106 VVLYQYEPCPYCCKVKAVLDYLKIPYEVVEVNPLTKKETKAFTDYRKVPVVRINDEVVVDSSAIISRLRELVEVPKDAQSEEA----LKEEEEWRQWVDKKLILLTPPNIYRTVPEALQAFDYCLTEGKFTPMERRMSKYAGAVIMYLIAKRSKKKYNIDDEREALYSALNSWVDAIGDKRPFLGGDEPNMADLSVFGVLRAMHGLDTYNDMMRETNIEPWFTRMTAKVGPSS 334
BLAST of NO10G01180 vs. NCBI_GenBank
Match: XP_008905955.1 (hypothetical protein PPTG_11598 [Phytophthora parasitica INRA-310] >ETN08768.1 hypothetical protein PPTG_11598 [Phytophthora parasitica INRA-310]) HSP 1 Score: 226.5 bits (576), Expect = 1.500e-55 Identity = 108/233 (46.35%), Postives = 150/233 (64.38%), Query Frame = 0 Query: 171 ITLYQYKICPFCCKVKAVLDYYKIPYETMDVNPLTKAEIKFSADYRKVPIARIGDEVVIDSSIIVGKIMDLLRAAHVAPAKELDAFFAPEATRWAEWADMELAVLLFPNITRTFGESYQAFSYVKDVPHFSMLDKLTNQWIGATAMWAAQGKIKKKYNITDERAALFAALETWSSEVGNK-PFLSGSTPNVGDLCVYACIRAIEGLDAHKDLLANTGIGPWYTRVEHAIGASS 403 + LYQY+ CP+CCKVKAVLDY KIPYE ++VNPLTK E K DYRKVP+ RI DEVV+DSS I+ ++ +L+ A ++E E W +W D +L +L PNI RT E+ QAF Y F+ +++ +++ GA M+ + KKKYNI DER AL++AL +W +G+K PFL G PN+ DL V+ +RA+ GLD + D++ T I PW+TR+ +G SS Sbjct: 106 VVLYQYEPCPYCCKVKAVLDYLKIPYEVVEVNPLTKKETKAFTDYRKVPVVRINDEVVVDSSAIISRLRELVEVPKDAQSEEA----LKEEEEWRQWVDKKLILLTPPNIYRTVPEALQAFDYCLTEGKFTPMERRMSKYAGAVIMYLIAKRSKKKYNIDDEREALYSALNSWVDAIGDKHPFLGGDEPNMADLSVFGVLRAMHGLDTYNDMMRETNIEPWFTRMTAKVGPSS 334
BLAST of NO10G01180 vs. NCBI_GenBank
Match: ETO75252.1 (hypothetical protein F444_09120 [Phytophthora parasitica P1976] >ETP16353.1 hypothetical protein F441_09026 [Phytophthora parasitica CJ01A1] >KUF90784.1 DNA-directed RNA polymerase [Phytophthora nicotianae]) HSP 1 Score: 226.5 bits (576), Expect = 1.500e-55 Identity = 108/233 (46.35%), Postives = 150/233 (64.38%), Query Frame = 0 Query: 171 ITLYQYKICPFCCKVKAVLDYYKIPYETMDVNPLTKAEIKFSADYRKVPIARIGDEVVIDSSIIVGKIMDLLRAAHVAPAKELDAFFAPEATRWAEWADMELAVLLFPNITRTFGESYQAFSYVKDVPHFSMLDKLTNQWIGATAMWAAQGKIKKKYNITDERAALFAALETWSSEVGNK-PFLSGSTPNVGDLCVYACIRAIEGLDAHKDLLANTGIGPWYTRVEHAIGASS 403 + LYQY+ CP+CCKVKAVLDY KIPYE ++VNPLTK E K DYRKVP+ RI DEVV+DSS I+ ++ +L+ A ++E E W +W D +L +L PNI RT E+ QAF Y F+ +++ +++ GA M+ + KKKYNI DER AL++AL +W +G+K PFL G PN+ DL V+ +RA+ GLD + D++ T I PW+TR+ +G SS Sbjct: 106 VVLYQYEPCPYCCKVKAVLDYLKIPYEVVEVNPLTKKETKAFTDYRKVPVVRINDEVVVDSSAIISRLRELVEVPKDAQSEEA----LKEEEEWRQWVDKKLILLTPPNIYRTVPEALQAFDYCLTEGKFTPMERRMSKYAGAVIMYLIAKRSKKKYNIDDEREALYSALNSWVDAIGDKRPFLGGDEPNMADLSVFGVLRAMHGLDTYNDMMRETNIEPWFTRMTAKVGPSS 334
BLAST of NO10G01180 vs. NCBI_GenBank
Match: ETP44397.1 (hypothetical protein F442_08999 [Phytophthora parasitica P10297]) HSP 1 Score: 226.5 bits (576), Expect = 1.500e-55 Identity = 108/233 (46.35%), Postives = 150/233 (64.38%), Query Frame = 0 Query: 171 ITLYQYKICPFCCKVKAVLDYYKIPYETMDVNPLTKAEIKFSADYRKVPIARIGDEVVIDSSIIVGKIMDLLRAAHVAPAKELDAFFAPEATRWAEWADMELAVLLFPNITRTFGESYQAFSYVKDVPHFSMLDKLTNQWIGATAMWAAQGKIKKKYNITDERAALFAALETWSSEVGNK-PFLSGSTPNVGDLCVYACIRAIEGLDAHKDLLANTGIGPWYTRVEHAIGASS 403 + LYQY+ CP+CCKVKAVLDY KIPYE ++VNPLTK E K DYRKVP+ RI DEVV+DSS I+ ++ +L+ A ++E E W +W D +L +L PNI RT E+ QAF Y F+ +++ +++ GA M+ + KKKYNI DER AL++AL +W +G+K PFL G PN+ DL V+ +RA+ GLD + D++ T I PW+TR+ +G SS Sbjct: 106 VVLYQYEPCPYCCKVKAVLDYLKIPYEVVEVNPLTKKETKAFTDYRKVPVVRINDEVVVDSSAIISRLRELVEVPKDAQSEEA----LKEEEEWRQWVDKKLILLTPPNIYRTVPEALQAFDYCLTEGKFTPMERRMSKYAGAVIMYLIAKRSKKKYNIDDEREALYSALNSWVDAIGDKRPFLGGDEPNMADLSVFGVLRAMHGLDTYNDMMRETNIEPWFTRMTAKVGPSS 334
BLAST of NO10G01180 vs. NCBI_GenBank
Match: KUF91108.1 (Prostaglandin E synthase 2 [Phytophthora nicotianae]) HSP 1 Score: 226.5 bits (576), Expect = 1.500e-55 Identity = 108/233 (46.35%), Postives = 150/233 (64.38%), Query Frame = 0 Query: 171 ITLYQYKICPFCCKVKAVLDYYKIPYETMDVNPLTKAEIKFSADYRKVPIARIGDEVVIDSSIIVGKIMDLLRAAHVAPAKELDAFFAPEATRWAEWADMELAVLLFPNITRTFGESYQAFSYVKDVPHFSMLDKLTNQWIGATAMWAAQGKIKKKYNITDERAALFAALETWSSEVGNK-PFLSGSTPNVGDLCVYACIRAIEGLDAHKDLLANTGIGPWYTRVEHAIGASS 403 + LYQY+ CP+CCKVKAVLDY KIPYE ++VNPLTK E K DYRKVP+ RI DEVV+DSS I+ ++ +L+ A ++E E W +W D +L +L PNI RT E+ QAF Y F+ +++ +++ GA M+ + KKKYNI DER AL++AL +W +G+K PFL G PN+ DL V+ +RA+ GLD + D++ T I PW+TR+ +G SS Sbjct: 106 VVLYQYEPCPYCCKVKAVLDYLKIPYEVVEVNPLTKKETKAFTDYRKVPVVRINDEVVVDSSAIISRLRELVEVPKDAQSEEA----LKEEEEWRQWVDKKLILLTPPNIYRTVPEALQAFDYCLTEGKFTPMERRMSKYAGAVIMYLIAKRSKKKYNIDDEREALYSALNSWVDAIGDKRPFLGGDEPNMADLSVFGVLRAMHGLDTYNDMMRETNIEPWFTRMTAKVGPSS 334
BLAST of NO10G01180 vs. NCBI_GenBank
Match: XP_024584333.1 (prostaglandin e [Plasmopara halstedii] >CEG47964.1 prostaglandin e [Plasmopara halstedii]) HSP 1 Score: 226.1 bits (575), Expect = 2.000e-55 Identity = 109/233 (46.78%), Postives = 153/233 (65.67%), Query Frame = 0 Query: 171 ITLYQYKICPFCCKVKAVLDYYKIPYETMDVNPLTKAEIKFSADYRKVPIARIGDEVVIDSSIIVGKIMDLLRAAHVAPAKELDAFFAPEATRWAEWADMELAVLLFPNITRTFGESYQAFSYVKDVPHFSMLDKLTNQWIGATAMWAAQGKIKKKYNITDERAALFAALETWSSEVGN-KPFLSGSTPNVGDLCVYACIRAIEGLDAHKDLLANTGIGPWYTRVEHAIGASS 403 + LYQY+ CP+CCKVKAVLDYYKIPYE ++VNPLTK E K DYRKVPIARI +EV++DSS I+ K+ +L+ + K+ D E W +W D +L VL PNI RT E+ QAF Y +F++L++ ++ GA M+ + KKKYN+ DER A+++AL +W +G+ + FL G PN+ DL V+ +RA+ GLD + D++ T I PW+TR+ +GASS Sbjct: 82 VVLYQYEPCPYCCKVKAVLDYYKIPYEVVEVNPLTKKETKAFTDYRKVPIARINNEVIVDSSAIISKLRELMNES--KSLKQSDE-ARVEEDHWRQWVDQKLIVLAPPNIYRTVPEALQAFDYCLTEGNFTLLERRVAKYAGAMIMYIIAKRSKKKYNVDDERQAIYSALTSWIKAIGDEREFLGGHEPNMADLSVFGVLRAMHGLDTYNDIMRETNIEPWFTRMTAKVGASS 311
BLAST of NO10G01180 vs. NCBI_GenBank
Match: XP_002774063.1 (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >EER05879.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 224.6 bits (571), Expect = 5.700e-55 Identity = 111/237 (46.84%), Postives = 159/237 (67.09%), Query Frame = 0 Query: 171 ITLYQYKICPFCCKVKAVLDYYKIPYETMDVNPLTKAEIKFSADYRKVPIARIGDEVVIDSSIIVGKIMDLLRAAHVAPAKELDAFFAPEATRWAEWADMELAVLLFPNITRTFGESYQAFSYVKDVPHFSMLDKLTNQWIGATAMWAAQGKIKKKYNITDERAALFAALETWSSEVGNK--PFLSGSTPNVGDLCVYACIRAIEGLDAHKDLLAN-TGIGPWYTRVEHAIGASSCV 405 + +YQY+ICP+C KVKA LD+ ++PY+TMDVNPLTK EI+FS DYRKVPIA I V DS+ I+ K++++L +V + DA E ++W +W D +LAVLLFPN+TRTFGES++AF Y+ ++PH + K+ N+ +G AMW A KI+KKY+I DER L ++ W+ ++ + F G +P++ D+ VY CIR++EG H LL N T + WY R+ A+ SS V Sbjct: 21 VNIYQYEICPYCNKVKAFLDWQQVPYKTMDVNPLTKGEIRFSKDYRKVPIAFIDGVQVNDSAEIIKKLVEVLGRENVTKQMQ-DA----EISKWVDWTDNKLAVLLFPNLTRTFGESFEAFGYIMNIPHMWLPMKMVNRLLGGWAMWMANDKIRKKYDIDDEREDLLKCIDEWTLDLAARGGKFHGGPSPDLADVAVYGCIRSLEGFTTHHWLLRNHTDLLAWYNRMFRAMPKSSRV 252 The following BLAST results are available for this feature:
BLAST of NO10G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01180 ID=NO10G01180|Name=NO10G01180|organism=Nannochloropsis oceanica|type=gene|length=1401bpback to top protein sequence of NO10G01180.1 >NO10G01180.1-protein ID=NO10G01180.1-protein|Name=NO10G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=408bpback to top Synonyms
Publications
|