NO10G01040, NO10G01040 (gene) Nannochloropsis oceanica

Overview
NameNO10G01040
Unique NameNO10G01040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4343
Alignment locationchr10:316164..320506 +

Link to JBrowse

Properties
Property NameValue
DescriptionPAP/25A-associated
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:316164..320506 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002058PAP_assoc
Homology
BLAST of NO10G01040 vs. NCBI_GenBank
Match: XP_024573172.1 (S-M checkpoint control protein CID1 and related nucleotidyltransferases [Plasmopara halstedii] >CEG36803.1 S-M checkpoint control protein CID1 and related nucleotidyltransferases [Plasmopara halstedii])

HSP 1 Score: 219.2 bits (557), Expect = 7.500e-53
Identity = 157/478 (32.85%), Postives = 240/478 (50.21%), Query Frame = 0
Query:  715 VASVLQAALGNRFVFSCLDAGQRAFLLGAE-ALWCPFNEEFFPSPAAKHAHYLEQW---QVDFIP--TPLDA------IPPSVIEALTVEMNALLPALYPSATFFQ-TREEVRQRIEA-LLPSLGDEIFPPGTRLRVFGSSANNFGNDAADLDMCVTFPNVGEGXXXXXXXXXXXXXXXMIEALAALLEEEGMEDVVPRPTARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRVRALAYTVKHWARARKINNASGGTLSSYAYILMVLHFXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLLPPDWGGREVDRRELLRGRRHLPHVLVKHP---LEGVE--VDTYFY-----TEDREREGGGAELLKQYAKRNEASVGALLVTFFQYYTWEFDYREHVLSVRM--GGLLRKEEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEGSREH 1167
            + +VL A   NR+V   +   Q A +  A+   +C  +  +F +   + A +LE +    +DF P  +  DA        P V  ALT  +      L P  T F+ +R+ +  ++ + ++  L          L VFGSSAN FGN+ +D+DMC+  P+                   +++ L A  +     D   R TARIPIV+F    +G++CD+ +EN LA RNT LL  Y+  DPRVR+LAY +KH+ + R++N A+ GTLSSY Y+LM++HF                           LQ+LPP+W     D         +LP V+ + P   LEG+   ++TYFY      E +++      LL+ Y  RN  +VG L+++FF+YY  +FD    ++SVR      + KEEK +   W   +RL++EDPFE  Y+V H LK  + ++IRQ+F RAY L +    + H
Sbjct:  433 MCNVLNAVEANRYVRELIADDQLAEIAHAQRKRFCQVSGLYFANKDERCAFWLEHFGFASIDFGPSGSKSDAECKVLQTSPFVTRALTQWVEQEASTLIPDRTAFRASRQSIYNQVHSNVIAKLSFT-----CELDVFGSSANEFGNEYSDMDMCLVLPD----DNCPTLEEKQRMLLEVVDHLEARPDLFASVDTT-RLTARIPIVMFVSRASGIECDLCMENRLAQRNTSLLRAYASADPRVRSLAYVLKHFVKQRRMNCAAEGTLSSYGYLLMLIHFLQRQNPPVLPV----------------LQMLPPNWPDESCD---------NLPSVICRGPSDELEGLADGIETYFYDPYAFPEPKDK----LALLRGYCSRNRQTVGELMLSFFRYYGLQFDATRDIVSVRCPDARTMTKEEKRQTCQWRFTTRLSIEDPFEVSYDVAHVLKGSRDKYIRQQFVRAYVLLMNGAIQSH 871          
BLAST of NO10G01040 vs. NCBI_GenBank
Match: OQR99483.1 (hypothetical protein ACHHYP_06019 [Achlya hypogyna])

HSP 1 Score: 218.0 bits (554), Expect = 1.700e-52
Identity = 154/476 (32.35%), Postives = 236/476 (49.58%), Query Frame = 0
Query:  715 VASVLQAALGNRFVFSCL-DAGQRAFLLGAEALWCPFNEEFFPSPAAKHAHYLEQWQVDF-IPTPLDAIPPSVIEALTVEMNALLPALYPS-ATFFQTREEVRQRIEALLPSLGDEIFPPGTRLRVFGSSANNFGNDAADLDMCVTFPNVGEGXXXXXXXXXXXXXXXMIEALAALLEEEGMEDV-VPRPTARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRVRALAYTVKHWARARKINNASGGTLSSYAYILMVLHFXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLLPPDWGG------REVDRRELLRGRRHLPH----VLVKHPLEGV--------EVDTYFYTEDREREGGGAELLKQYAKRNEASVGALLVTFFQYYTWE-FDYREHVLSVRMGGLLRKEEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEGSREHG 1168
            + ++L     NR+V+  L    Q+   +    L+C  ++ +F +  AK  ++  Q  + F +   +D   P+   ALT  ++     L P  A F   R+ + +R+  ++  L  +  P G  L VFGSS N FG   +D+DMC+  P   E                ++ AL + L  +    +   R TARIPIV+F D  +G+DCD+ VEN LALRNT+LL  Y+  DPRVR LAY +K W +AR++NNA+ GTLSSY Y+LM++H+                           LQ LPP W G         D+   +      P+    +  +  ++G         + +TYF+    +        L+ +   N +SVGALL+ FF++Y  E FDY  HV+++RMG  L K EK +   W  + RL +EDPFE  Y+V H +K  + +++RQ+ ARAY L V+     +G
Sbjct:  197 IRTLLHVTETNRYVWESLAPTVQKLVSMYQTRLYCGVSDRYFETTEAKQEYW--QGHLGFPLRDSVDPWAPAFDHALTAWLHHKSQELIPDVAAFTAARQAIFERVSNVVSDLQFKGLPIG--LDVFGSSNNFFGTKDSDMDMCLVLPKGSE--------PTAVEKQEILRALVSNLSPDLFAGIDTGRLTARIPIVMFHDVTSGIDCDVCVENALALRNTRLLRTYALADPRVRILAYFIKAWVKAREMNNAAQGTLSSYGYLLMLIHYLQRTSPPVLPV----------------LQSLPPQWQGEIWCRCHREDKATTVDQSATCPYRPCMMKARDQVDGPPLPVVPFGDAETYFFDPVHDEHW---HALRSFGAWNRSSVGALLLGFFKFYGDEGFDYAHHVVTIRMGRTLLKAEKPQ---WKQHHRLVIEDPFELDYDVAHVVKGARFKYVRQQLARAYWLLVQANMDGYG 638          
BLAST of NO10G01040 vs. NCBI_GenBank
Match: OQS03776.1 (hypothetical protein THRCLA_21068 [Thraustotheca clavata])

HSP 1 Score: 216.5 bits (550), Expect = 4.800e-52
Identity = 195/697 (27.98%), Postives = 313/697 (44.91%), Query Frame = 0
Query:  543 SLLYQLEQPE----IALFRLGVASNTNAVISKTIVIKPSXXXXXXXPLSSPSSAKGTLTFYAPRSAGVFVFRMF-DGGDPAATHGTSHAFVVEVQGRDVEGNLRLISTQLRERK---------TVVAGLSQLGVLLKELRPMQP---GRQFNTLLWTCLQWSVKQIKEGGEEEGKEGEKTRSRYPIIAGVASVLQAALGNRFVFSCL-DAGQRAFLLGAEALWCPFNEEFFPSPAAKHAHYLEQWQVDFIPTPLDAIPPSVIEALTVEMNALLPALYPS-ATFFQTREEVRQRIEALLPSLGDEIFPPGTRLRVFGSSANNFGNDAADLDMCVTFPNVGEGXXXXXXXXXXXXXXXMIEALAALLEEEGMEDV-VPRPTARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRVRALAYTVKHWARARKINNASGGTLSSYAYILMVLHFXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLLPPDWGG------REVDRRELLRGRRHLPH----VLVKHPLEGVEV--------DTYFYTEDREREGGGAELLKQYAKRNEASVGALLVTFFQYYTWE---FDYREHVLSVRMGGLLRKEEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEGSREHGGGKGGGLLARICE--EAPDPPMRKQTMEDEE 1197
            +L YQL + E    + LFR+G +     +  +++            PL         L   AP++ G F FR F +   P   + TS    V V  +     L  + +++             + V G+ ++  +L    P Q    G     LL    +    QI E   EE  +G            + ++L     NR+V+  L  + Q+   +    L+C  ++ +F +P AK  ++     + F  +  +   P+  +AL V ++     + P  A F  TR+ + +R+  ++  L  +    G  L VFGSS N FG   +D+DMC+  P+  E                +++ L  +L  +    +   R TARIPIV+F D  + +DCD+ VEN LALRNT+LL  Y+  DPRVR LAY +K W ++R++NNA+ GTLSSY Y+LM++H+                           LQ LPP W G         D    L      P+    +  +  ++G  +        +TYF+    +        L+ +   N  +VG+LL+ FF++Y  E   FDY  H++++RMG  L K EK +   W  + RLA+EDPFET Y+V H +K  + ++IRQ+ +RAY L V+     +G       +  I E   +P   + K+  ED+E
Sbjct:   87 TLPYQLAETEFPLVMGLFRIGHSHQNRPIFLRSL----QFDMRRRMPL-----VVTRLQVKAPKTIGEFEFRAFNEDKGPDTVYATSGPLKVLVDEKYWCEALETLGSRIEAAAEAQDIAMIVSAVLGILRVVEVLPTSFPAQASLFGMHVEHLLGLVFE---VQIWEAESEESLDGWH--------GAIRTLLHVTEINRYVWESLAPSVQKLVSMYQSRLYCGVSDRYFETPEAKKEYWQTHLNIPFQDSVAE-WAPAFEQALDVWLHNKGKEIIPDVAEFTATRQAIFERVSRIVSQLQFKDHLIG--LDVFGSSNNFFGTKDSDMDMCLVLPSGVE--------LSSTEKQDILKMLVDMLPSDLFSSIDTGRLTARIPIVMFHDTTSDIDCDVCVENALALRNTRLLRTYALADPRVRILAYFIKAWVKSREMNNAAQGTLSSYGYLLMLIHYLQRTNPPVLPV----------------LQTLPPQWQGEIWCRCHRQDTTSSLDSSATCPYRPCMMKDRDQVDGPRLPNVPFGNSETYFFDPVHDEHW---HALRSFGSWNRQNVGSLLLGFFKFYGGEGEGFDYAHHIVTIRMGRTLLKAEKPQ---WKQHHRLAIEDPFETEYDVAHVVKGARFKYIRQQMSRAYWLLVQTNMDGYG-------IEEIMEIIMSPIEHVEKEATEDKE 723          
BLAST of NO10G01040 vs. NCBI_GenBank
Match: OEU19807.1 (hypothetical protein FRACYDRAFT_235870 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 214.2 bits (544), Expect = 2.400e-51
Identity = 144/401 (35.91%), Postives = 205/401 (51.12%), Query Frame = 0
Query:  784 SVIEALTVEMNALLPALYPSA-TFFQTREEVRQRIEALLPSLGDEIFPPGTRLRVFGSSANNFGNDAADLDMCVTFPN----VGEGXXXXXXXXXXXXXXXMIEALAALLEEEGMEDV-VPRPTARIPIVLFTDPKTG-----------LDCDISVENPLALRNTQLLHQYSRIDPRVRALAYTVKHWARARKINNASGGTLSSYAYILMVLHF------XXXXXXXXXXXXXXXXXXXXXXXXXXNLQLLPPDWGGREVDRRELLRGRRHLPHVLVKHPL-EGVEVDTYFYTEDREREGGGAELLKQYAKRNEASVGALLVTFFQYYTWEFDYREHVLSV---RMGGLLRKEEKAEEDGWA-VNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAYA 1157
            S+   L+  M  L   +Y +A +  Q RE +R RIE L+     E FPPGT++ +FGSSAN +G+  +DLDMC+  PN    VGE                 +  LA + EE  M DV   R +ARIP++ F  PK             ++CD+S+ NPLA+ NT LL  Y+ I+P  R +A  +K WA+AR INN +  TLSSY YILM+LHF                                NLQ +   W   E          R  P   ++HP  E V+V++YFY  +          L++     + S+  LL +FF YY ++FDY+ HV+S+   +  G++ +E KAE DGW   ++ L +EDPFET+Y+V H L+ G +  IR+EFA AY+
Sbjct:  904 SIFNQLSTSMGQLYQDVYFTADSILQQRELIRARIEKLVEMC--ECFPPGTKVAIFGSSANGYGSPKSDLDMCLQVPNDVSIVGE------------DGAKAMATLAQIFEENDMLDVDTTRLSARIPVIKFNCPKANGNNVSIDEDPLMECDLSMHNPLAVLNTSLLRTYAEINPVSRVMASVIKRWAKARDINNPARHTLSSYGYILMLLHFLTYHERSGDGLVSPLDKSSRMQNKPQATPLLANLQWMDNSW--PESSAGTPYTEFREPPKQPMQHPREEDVKVNSYFYRPNEM----NLRNLQRLFPGQDLSLAILLASFFHYYAYDFDYKRHVVSLNSTKSYGMVEREVKAELDGWRNYSAALTIEDPFETFYDVAHVLRGGYYHRIRREFAVAYS 1284          
BLAST of NO10G01040 vs. NCBI_GenBank
Match: XP_008878372.1 (hypothetical protein H310_12892 [Aphanomyces invadans] >ETV93099.1 hypothetical protein H310_12892 [Aphanomyces invadans])

HSP 1 Score: 211.8 bits (538), Expect = 1.200e-50
Identity = 188/611 (30.77%), Postives = 280/611 (45.83%), Query Frame = 0
Query:  600 APRSAGVFVFRMFDGGDPAATHGTSHAFVVEVQGRDVEGNLRLISTQL------RERKTVVAGLSQLGVLLKELRPMQP--GRQFNTLLWTCLQ--WSVKQIKEGGEEEGKEGEKTRSRYPIIAGVASVLQAALGNRFVFSCLD-AGQRAFLLGAEALWCPFNEEFFPSPAAKHAHYLEQWQVDFIPTPLDAIPPSVIEALTVEMNALLPALYPS-ATFFQTREEVRQRIEALLPSLGDEIFPPGT--RLRVFGSSANNFGNDAADLDMC-VTFPNVGEGXXXXXXXXXXXXXXXMIEALAALLEEEGMEDV-VPRPTARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRVRALAYTVKHWARARKINNASGGTLSSYAYILMVLHFXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLLPPDW----------------GGREVD-----------RRELLRG----RRHLPHVLVKHPLEGVEV--------DTYFYTEDREREGGGAELLKQYAKRNEASVGALLVTFFQYYTWEFDYREHVLSVRMGGLLRKEEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAY 1156
            AP++ G F FR++D   P +    +    V V     E +   + ++L      ++ +  VA +     +L+ +  + P  G + + LL   L+  W +++  +   ++G E         +   + S L     NR V+  +D A  +A        +C   + +F S AAK   +     V    T L    P++  A  V M+ L   L P  A F  TR+ + +R+ A++ ++     PP T   L VFGSS N FG+ A+D+DMC V  P V +                +++ L A L       V   R TARIPIV+F D  + ++CD+ VEN LALRNT+LL  Y+ IDPRVR LAY +KHW + R INNA+ GTLSSY YIL++LH+                           LQ LPP W                GG  +D           R   LRG    R   P   +   L+   +        +TYF+   ++ +    + L Q+A  N  SV  L +  FQY+   FDY  HV+S+RM   L K EKA+   W  ++RL +EDPFE  Y+V H +K  K +  RQE+A+ +
Sbjct:  148 APKTIGEFEFRVYDELSPESLVLPAMPLTVAVNLPYFEESSNTLESKLDHAVATQDIQAAVAAIMAYARVLEAVPTLYPAHGARLSGLLTRLLELRWDMEEWHDKA-DDGAESS-------VHGALRSFLHTVEANRHVWDIVDPATHQAIDFAQRHEYCGVVDRYFSSFAAKQDFWSVHVGVRPQETTLSTWWPALHVATNVWMDDLCRQLMPDLAAFSATRQTIYERVSAVVQTIPT---PPNTTVALDVFGSSNNFFGSMASDMDMCLVVQPPVQD----------PKIKQRLLQLLIARLPPTQFAHVDTARLTARIPIVMFQDIASTIECDVCVENALALRNTRLLRTYALIDPRVRQLAYLLKHWVKQRGINNAADGTLSSYGYILLLLHYLQRTEPPVLPV----------------LQTLPPTWQGSVWDVSLCFGDVGRGGAWLDSPRRFFHVGAIRCGCLRGDPPCRFRSPTCALTERLDESGLPSVVFQGHETYFFDPVQDMQW---QWLHQFAAANTQSVAQLWLGLFQYFDTSFDYASHVVSIRMARPLFKAEKAQ---WKYHARLMIEDPFELEYDVAHVVKGAKFKLTRQEWAKMH 715          
BLAST of NO10G01040 vs. NCBI_GenBank
Match: XP_002901367.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58894.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 211.8 bits (538), Expect = 1.200e-50
Identity = 201/671 (29.96%), Postives = 307/671 (45.75%), Query Frame = 0
Query:  553 IALFRLGVASNTNAVISKTIVIKPSXXXXXXXPLSSPSSAKGTLTFYAPRSAGVFVFRMFD--------GGDPAATHGTSH-------AFVVEVQGRDVEGNLR-------LISTQLRERKTVVAGLSQLGVLLKELRPMQPGRQFNT-------LLWTCLQWSVKQIKEGGEEEGKEGEKTRS-RYPI---IAGVASVLQAALGNRFVFSCLDAGQRAFLLGAE-ALWCPFNEEFFPSPAAKHAHYLEQWQVDFIPTPL---DAIPPS---VIEALTVEMNALLPALYPSATFFQ-TREEVRQRIEALLPSLGDEIFPPGTRLRVFGSSANNFGNDAADLDMCVTFPNVGEGXXXXXXXXXXXXXXXMIEALAALLEEEGMEDVV--PRPTARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRVRALAYTVKHWARARKINNASGGTLSSYAYILMVLHFXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLLPPDWGGREVDRRELLRGRRHLPHVLVKHPLEGVE-------VDTYFY-----TEDREREGGGAELLKQYAKRNEASVGALLVTFFQYYTWEFDYREHVLSVRM--GGLLRKEEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEGSREH 1167
            + LFRLG  +N   +  K ++ +                    +TF APRS G F FR+F+        G  P   H  SH       + V   +   ++  L        L +T  + ++ VV G + L VL   L  M+   Q  T       LL   L+  +  ++   E+  +    T +  +P+      + +VL A   N++V   +   Q A +   +   +C  +  +F + A + A +LE +   F P  +   D +  S   V  ALT  +      L P  T F+ +R+ +  ++ A + S           L VFGSSAN FGN+ +D+DMC+  P V                  ++E +A L     +   V   R TARIPIV+F    +G++CD+ VEN LA RNT LL  Y+  DPRVR LAY +K + + R++N A+ GTLSSY Y+L+++HF                           LQ LPP+W        EL      LP VL + P E ++       +DTYFY      E +E+      +L++Y  RN  +VG LL+ F +YY  +FD    V+SVR    G + K++K     W   +RL++EDPFE  Y+V H LK  + ++IRQ+F RAY L + +G+ +H
Sbjct:  337 VGLFRLGQPTNDKPIFVKQVLFENKLHRNYRY-------LNTRITFRAPRSPGEFEFRVFEDKSHGHQSGKRPGDDHHDSHHHGKVSYSNVTIARSNRLKVCLEYSHFIDTLRATHDKFQQGVVDGDAGL-VLSALLALMRLVDQVETVFLHGHALLGDLLEACLGLLERRAEDIARSFTATETIPHPMETFHGTLRNVLNAIEANKYVRELVADDQLADIARIQRERFCQVSGLYFANSADRCAFWLEHF--GFAPIEMGSEDGVLHSCEFVTRALTQWVEREAAVLMPDRTTFRASRQSIYDQLHAEVISK----LSFTCELDVFGSSANEFGNEHSDMDMCLVLPEVA-------TPTVEDKQRMLMEVVACLEARPDLFTSVDTTRLTARIPIVMFVSRASGIECDLCVENRLAQRNTSLLRAYASADPRVRMLAYVLKQFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQDPPVLPV----------------LQALPPNW-------PEL--PSEPLPTVLSRGPSEELDPSDGKSGIDTYFYDPFAFQEPKEK----LAVLREYCSRNTQTVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDDKRHTCQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLLM-DGAIQH 956          
BLAST of NO10G01040 vs. NCBI_GenBank
Match: XP_009837124.1 (hypothetical protein, variant 2 [Aphanomyces astaci] >ETV73247.1 hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 209.9 bits (533), Expect = 4.500e-50
Identity = 176/586 (30.03%), Postives = 275/586 (46.93%), Query Frame = 0
Query:  600 APRSAGVFVFRMFDGGDPAATHGTSHAFVVEVQGRDVEGNLRLISTQL------RERKTVVAGLSQLGVLLKELRPMQP--GRQFNTLLWTCLQ--WSVKQIKEGGEEEGKEGEKTRSRYPIIAGVASVLQAALGNRFVFSCLD-AGQRAFLLGAEALWCPFNEEFFPSPAAKHAHYLEQWQVDFIPTPLDAIPPSVIEALTVEMNALLPALYPS-ATFFQTREEVRQRIEALLPSLGDEIFPPGT--RLRVFGSSANNFGNDAADLDMC-VTFPNVGEGXXXXXXXXXXXXXXXMIEALAALLEEEGMEDV-VPRPTARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRVRALAYTVKHWARARKINNASGGTLSSYAYILMVLHFXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLLPPDWGGREVDRRELLRG-----RRHLPHVLVKHPLEGVE---------VDTYFYTEDREREGGGAELLKQYAKRNEASVGALLVTFFQYYTWEFDYREHVLSVRMGGLLRKEEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAY 1156
            AP++ G F FR+FD   P A    S    V V     E +   + T+L      ++ + VV+ +     +L+ +  + P  G + + LL   L+  W + +  +  ++         +   +   + S       NR V+  +     +A        +C   + +F S A+K  ++     V    TP+ A  P +++A    M A    L P  A+F  TR+ + +R+ A++ ++     PP T   L VFGSS N FG+ A+D+DMC V  P V +                +++ L A L  +  +++   R TARIPIV+F D  + ++CD+ VEN LALRNT+LL  Y+  DPRVR LAY +KHW + R INNA+ GTLSSY YI+M+LH+                           LQ L P W G    R   LRG     R   P   +   ++             +TYF+   ++ +    + L Q+   N  S+  L +  F+Y+   FDY  HV+S+RM   L K EK +   W  ++RL +EDPFE  Y+V H +K  K + +RQE+A+ +
Sbjct:  138 APKTIGEFEFRVFDELSPDALVLPSMPLAVLVDLPYFEESSTTLDTKLDHAATSQDIQVVVSAIMAYARVLEAVPTLYPTHGSRLSGLLTRLLELRWDMDEWHDKADD---------AESSVHGALRSFFHTVEANRHVWDIVSPTTHQAIDFAQRHEYCGVFDRYFSSFASKQDYWSVHLGVRPQETPVSAWWPPLLDAANQWMAATCQQLMPDLASFSATRQAIYERVSAVVHTIPT---PPNTTVALDVFGSSNNFFGSMASDMDMCLVVQPPVQD----------PKIKQRLLQLLVARLPPDQFDNLDTARLTARIPIVMFRDIPSTIECDVCVENALALRNTRLLRTYALADPRVRQLAYLLKHWVKQRGINNAADGTLSSYGYIIMLLHYLQRTEPPVIPV----------------LQTLSPAWQGE--IRCGCLRGGVEGCRFRSPACALSERMDDTPGLPSVKFQGHETYFFDPVQDVQW---QWLHQFGAANTQSLAELWLGLFRYFDSTFDYATHVVSIRMARPLFKAEKPQ---WKYHARLMIEDPFELDYDVAHVVKGAKFKLMRQEWAKMH 677          
BLAST of NO10G01040 vs. NCBI_GenBank
Match: ETI41782.1 (hypothetical protein F443_13013 [Phytophthora parasitica P1569] >ETK81815.1 hypothetical protein L915_12714 [Phytophthora parasitica] >ETL35225.1 hypothetical protein L916_12619 [Phytophthora parasitica] >ETM41717.1 hypothetical protein L914_12533 [Phytophthora parasitica] >ETP11519.1 hypothetical protein F441_12971 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 207.2 bits (526), Expect = 2.900e-49
Identity = 194/677 (28.66%), Postives = 301/677 (44.46%), Query Frame = 0
Query:  553 IALFRLGVASNTNAVISKTIVIKPSXXXXXXXPLSSPSSAKGTLTFYAPRSAGVFVFRMF------------------DGGDPAATHG-TSHAFVVEVQGRDVEGNLR-------LISTQLRERKTVVAGLSQLGVLLKELRPMQPGRQFNT-------LLWTCLQWSVKQIKEGGEEEGKEGEKTRS-RYPI---IAGVASVLQAALGNRFVFSCLDAGQRAFLLGAE-ALWCPFNEEFFPSPAAKHAHYLEQWQVDFIPTPLDAIPPS------------VIEALTVEMNALLPALYPSATFFQ-TREEVRQRIEALLPSLGDEIFPPGTRLRVFGSSANNFGNDAADLDMCVTFPNVGEGXXXXXXXXXXXXXXXMIEALAALLEEEGMEDVV--PRPTARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRVRALAYTVKHWARARKINNASGGTLSSYAYILMVLHFXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLLPPDWGGREVDRRELLRGRRHLPHVLVKHPLEGVE-------VDTYFYTEDRERE-GGGAELLKQYAKRNEASVGALLVTFFQYYTWEFDYREHVLSVRM--GGLLRKEEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEGSREH 1167
            + LFRLG  +N   +  K ++ +                    +TF APRS G F FR+F                  D       HG  S++ V   +   ++  L        L +T  + ++ V  G + L VL   L  M+   Q  T       LL   L+  ++ ++   E+  +    T +  +P+      + +VL A   N+FV   +   Q A +   +   +C  +  +F + A + A +LE +   F P  + A                V  ALT  +      L P  T F+ +R+ +  ++ A + S           L VFGSSAN FGN+ +D+DMC+  P                    ++E +A L     +   V   R TARIPIV+F    +G++CD+ VEN LA RNT LL  Y+  DPRVR LAY +K + + R++N A+ GTLSSY Y+L+++HF                           LQ LPP+W     ++         LP VL + P + ++       ++TYFY     +E      +L++Y  RN  +VG LL+ F +YY  +FD    V+SVR    G + K+EK     W   +RL++EDPFE  Y+V H LK  + ++IRQ+F RAY L + +G+ +H
Sbjct:  366 VGLFRLGQPTNDKPIFVKQVLFENKLHRNYRF-------LNTRITFRAPRSPGEFEFRVFEDKSGHGHQNGKRQGHSNDDXXXXXXHGKVSYSNVTIARSNRLKVCLEYSHFIDTLRATHDKFQQGVADGDAGL-VLSALLALMRLVDQVETVFLHGHALLGDLLEACLRLLERRAEDIARSFTATETIPHPMETFHGTLRNVLNAIEANKFVRELIADDQLADIARIQRERFCQVSGLYFANDADRCAFWLEHF--GFAPIEIAASGSEDGEGEMLHSSAFVTRALTQWVEREAAVLMPDRTAFRASRQSIYDQLHAEVISK----LSFTCELDVFGSSANEFGNEHSDMDMCLVLPEAA-------TPTVEEKQRMLMEVVARLEARPDLFTSVDTTRLTARIPIVMFVSRASGIECDLCVENRLAQRNTSLLRAYASADPRVRMLAYVIKRFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQDPPVVPV----------------LQALPPNWPDLPSEK---------LPSVLCRGPSDELDPSDGHSGIETYFYDPFAFQEPNEKLAILRKYCSRNTQTVGELLLGFLRYYGLQFDATRDVVSVRRPDAGSVTKDEKRHSCQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLLM-DGAIQH 995          
BLAST of NO10G01040 vs. NCBI_GenBank
Match: ETL88465.1 (hypothetical protein L917_12459 [Phytophthora parasitica])

HSP 1 Score: 207.2 bits (526), Expect = 2.900e-49
Identity = 194/677 (28.66%), Postives = 301/677 (44.46%), Query Frame = 0
Query:  553 IALFRLGVASNTNAVISKTIVIKPSXXXXXXXPLSSPSSAKGTLTFYAPRSAGVFVFRMF------------------DGGDPAATHG-TSHAFVVEVQGRDVEGNLR-------LISTQLRERKTVVAGLSQLGVLLKELRPMQPGRQFNT-------LLWTCLQWSVKQIKEGGEEEGKEGEKTRS-RYPI---IAGVASVLQAALGNRFVFSCLDAGQRAFLLGAE-ALWCPFNEEFFPSPAAKHAHYLEQWQVDFIPTPLDAIPPS------------VIEALTVEMNALLPALYPSATFFQ-TREEVRQRIEALLPSLGDEIFPPGTRLRVFGSSANNFGNDAADLDMCVTFPNVGEGXXXXXXXXXXXXXXXMIEALAALLEEEGMEDVV--PRPTARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRVRALAYTVKHWARARKINNASGGTLSSYAYILMVLHFXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLLPPDWGGREVDRRELLRGRRHLPHVLVKHPLEGVE-------VDTYFYTEDRERE-GGGAELLKQYAKRNEASVGALLVTFFQYYTWEFDYREHVLSVRM--GGLLRKEEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEGSREH 1167
            + LFRLG  +N   +  K ++ +                    +TF APRS G F FR+F                  D       HG  S++ V   +   ++  L        L +T  + ++ V  G + L VL   L  M+   Q  T       LL   L+  ++ ++   E+  +    T +  +P+      + +VL A   N+FV   +   Q A +   +   +C  +  +F + A + A +LE +   F P  + A                V  ALT  +      L P  T F+ +R+ +  ++ A + S           L VFGSSAN FGN+ +D+DMC+  P                    ++E +A L     +   V   R TARIPIV+F    +G++CD+ VEN LA RNT LL  Y+  DPRVR LAY +K + + R++N A+ GTLSSY Y+L+++HF                           LQ LPP+W     ++         LP VL + P + ++       ++TYFY     +E      +L++Y  RN  +VG LL+ F +YY  +FD    V+SVR    G + K+EK     W   +RL++EDPFE  Y+V H LK  + ++IRQ+F RAY L + +G+ +H
Sbjct:  366 VGLFRLGQPTNDKPIFVKQVLFENKLHRNYRF-------LNTRITFRAPRSPGEFEFRVFEDKSGHGHQNGKRQGHSNDDXXXXXXHGKVSYSNVTIARSNRLKVCLEYSHFIDTLRATHDKFQQGVADGDAGL-VLSALLALMRLVDQVETVFLHGHALLGDLLEACLRLLERRAEDIARSFTATETIPHPMETFHGTLRNVLNAIEANKFVRELIADDQLADIARIQRERFCQVSGLYFANDADRCAFWLEHF--GFAPIEIAASGSEDGEGEMLHSSAFVTRALTQWVEREAAVLMPDRTAFRASRQSIYDQLHAEVISK----LSFTCELDVFGSSANEFGNEHSDMDMCLVLPEAA-------TPTVEEKQRMLMEVVARLEARPDLFTSVDTTRLTARIPIVMFVSRASGIECDLCVENRLAQRNTSLLRAYASADPRVRMLAYVIKRFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQDPPVVPV----------------LQALPPNWPDLPSEK---------LPSVLCRGPSDELDPSDGHSGIETYFYDPFAFQEPNEKLAILRKYCSRNTQTVGELLLGFLRYYGLQFDATRDVVSVRRPDAGSVTKDEKRHSCQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLLM-DGAIQH 995          
BLAST of NO10G01040 vs. NCBI_GenBank
Match: XP_008894020.1 (hypothetical protein PPTG_03093 [Phytophthora parasitica INRA-310] >ETN19992.1 hypothetical protein PPTG_03093 [Phytophthora parasitica INRA-310])

HSP 1 Score: 207.2 bits (526), Expect = 2.900e-49
Identity = 194/677 (28.66%), Postives = 301/677 (44.46%), Query Frame = 0
Query:  553 IALFRLGVASNTNAVISKTIVIKPSXXXXXXXPLSSPSSAKGTLTFYAPRSAGVFVFRMF------------------DGGDPAATHG-TSHAFVVEVQGRDVEGNLR-------LISTQLRERKTVVAGLSQLGVLLKELRPMQPGRQFNT-------LLWTCLQWSVKQIKEGGEEEGKEGEKTRS-RYPI---IAGVASVLQAALGNRFVFSCLDAGQRAFLLGAE-ALWCPFNEEFFPSPAAKHAHYLEQWQVDFIPTPLDAIPPS------------VIEALTVEMNALLPALYPSATFFQ-TREEVRQRIEALLPSLGDEIFPPGTRLRVFGSSANNFGNDAADLDMCVTFPNVGEGXXXXXXXXXXXXXXXMIEALAALLEEEGMEDVV--PRPTARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRVRALAYTVKHWARARKINNASGGTLSSYAYILMVLHFXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLLPPDWGGREVDRRELLRGRRHLPHVLVKHPLEGVE-------VDTYFYTEDRERE-GGGAELLKQYAKRNEASVGALLVTFFQYYTWEFDYREHVLSVRM--GGLLRKEEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEGSREH 1167
            + LFRLG  +N   +  K ++ +                    +TF APRS G F FR+F                  D       HG  S++ V   +   ++  L        L +T  + ++ V  G + L VL   L  M+   Q  T       LL   L+  ++ ++   E+  +    T +  +P+      + +VL A   N+FV   +   Q A +   +   +C  +  +F + A + A +LE +   F P  + A                V  ALT  +      L P  T F+ +R+ +  ++ A + S           L VFGSSAN FGN+ +D+DMC+  P                    ++E +A L     +   V   R TARIPIV+F    +G++CD+ VEN LA RNT LL  Y+  DPRVR LAY +K + + R++N A+ GTLSSY Y+L+++HF                           LQ LPP+W     ++         LP VL + P + ++       ++TYFY     +E      +L++Y  RN  +VG LL+ F +YY  +FD    V+SVR    G + K+EK     W   +RL++EDPFE  Y+V H LK  + ++IRQ+F RAY L + +G+ +H
Sbjct:  366 VGLFRLGQPTNDKPIFVKQVLFENKLHRNYRF-------LNTRITFRAPRSPGEFEFRVFEDKSGHGHQNGKRQGHSNDDXXXXXXHGKVSYSNVTIARSNRLKVCLEYSHFIDTLRATHDKFQQGVADGDAGL-VLSALLALMRLVDQVETVFLHGHALLGDLLEACLRLLERRAEDIARSFTATETIPHPMETFHGTLRNVLNAIEANKFVRELIADDQLADIARIQRERFCQVSGLYFANDADRCAFWLEHF--GFAPIEIAASGSEDGEGEMLHSSAFVTRALTQWVEREAAVLMPDRTAFRASRQSIYDQLHAEVISK----LSFTCELDVFGSSANEFGNEHSDMDMCLVLPEAA-------TPTVEEKQRMLMEVVARLEARPDLFTSVDTTRLTARIPIVMFVSRASGIECDLCVENRLAQRNTSLLRAYASADPRVRMLAYVIKRFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQDPPVVPV----------------LQALPPNWPDLPSEK---------LPSVLCRGPSDELDPSDGHSGIETYFYDPFAFQEPNEKLAILRKYCSRNTQTVGELLLGFLRYYGLQFDATRDVVSVRRPDAGSVTKDEKRHSCQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLLM-DGAIQH 995          
The following BLAST results are available for this feature:
BLAST of NO10G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_024573172.17.500e-5332.85S-M checkpoint control protein CID1 and related nu... [more]
OQR99483.11.700e-5232.35hypothetical protein ACHHYP_06019 [Achlya hypogyna... [more]
OQS03776.14.800e-5227.98hypothetical protein THRCLA_21068 [Thraustotheca c... [more]
OEU19807.12.400e-5135.91hypothetical protein FRACYDRAFT_235870 [Fragilario... [more]
XP_008878372.11.200e-5030.77hypothetical protein H310_12892 [Aphanomyces invad... [more]
XP_002901367.11.200e-5029.96conserved hypothetical protein [Phytophthora infes... [more]
XP_009837124.14.500e-5030.03hypothetical protein, variant 2 [Aphanomyces astac... [more]
ETI41782.12.900e-4928.66hypothetical protein F443_13013 [Phytophthora para... [more]
ETL88465.12.900e-4928.66hypothetical protein L917_12459 [Phytophthora para... [more]
XP_008894020.12.900e-4928.66hypothetical protein PPTG_03093 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000973NSK000973Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01040.1NO10G01040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554375gene_4113Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100196g2gene5167Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01040.1NO10G01040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01040 ID=NO10G01040|Name=NO10G01040|organism=Nannochloropsis oceanica|type=gene|length=4343bp
ATGCACCACCAGCGGTGGCGTGGGGGTGGCGGGAAGAGTGATGAGgtgtg
tgcgactctgttgatgtgtgttgattcaggaagccgctggaagcttgccc
gccttgctccccgtacatcagtgttataaaagatgcgagtcccggcacat
ttacacgcgtgacgcctacctctagtccctacttttcaaatctatcctct
ttcttggtggagtcagcgccgtgccatggacgcagaagcattccatatta
tccccatctaacatcactccacacgactaccctacataatgacactctag
GACGTACTCATCGCTTTCATGAAGCTCGTGCGAGAAGGACACCCCGTGGC
AGTAGAGGCTCAAAATAGATATCAACGGGACAATGATCAACAGACATTCC
TGGCCACGGCTCGAGCGCTCCTCGACGGAGGGGGTGGAGAAGCTGGAACG
GCCCCCCCCCCGCAACAACAACAACAGCAGCAACAGCAGCAGCAGCAGAA
TGGCGGCGAGGATTTTGCGGTACAGCAGCATCAGCTACAGCAGCCACCAC
GCTCTTCTATCTCGGTCCTTGAGGCTTTACGCGGAGGTGGAGGAGGAGAT
GGAGGGGAAGAGCAGCAGCAGCAGCAGCAGCTGCAACACCAACAGCAACA
GCCCCAGCAGCCGCCCCACTCGATGGGACTTTTGGGGAATGGTGAAGGTA
ATCTGCCAGGCTTTGATCTCTTCTCTGCAATGGCAGCAGAAGCTTCGGGG
CAACAAGGGCCAGGAGGGCGAGGAGTGGTTGAAGGAGGGCAAGCTCCATC
GCTACCACCACCAAACCTGTTGGGAAATATGATGCTTGGCAACTATCAGC
TGCCCCCTTTTCTCCCGCAGGAAGAACAACAAGGCGCCTCATCGATATCG
CAGCAGCAGCAACCTTCCCCTTTCGCTTACCTACCGCAGGGGCAGCAAAA
GCTGCAGCCACCGCAGTCACATATGATGTTGAATGTCCCTTCTCACTTGC
ATACAGGCCATGGCATGATGGGGATGTCGCCATCTGGAGAAGGAAGAGAG
GGAAGAGGAGGAAGTTTTGAAATGGGGGAAGGGCCACCGCATCCTCACAT
GTTTATGCACCCGCCGAATCCTATTCCTCCTCACTTGTTGGCCGGGTTGT
TGGGACCCGGGGCAGGAGGAGGGGAAGGAGGAGGGGAGGGAGGGGGAGGA
GGAGGCTTGCCGGGGAGCGGTGCTGGGGGAAGGGGGCGGGATAGAGAAAA
TGGAGAACACCACCAACTGTTCCAACAGCGAGGAGAATACCAGCAGCAGC
AGCAGCAGCTGTACAGTCAACAGCAGCAGCGGCAGCAGCAGCAGCTGTAC
AATCAACAGCAACAGCAGTCGCCATCCCTGCCTCCGCTTTTAGGGGAAGG
GTCTCCTTACGATTGTCCTTCACGGATTAATCAGCTACAGCAATGGCAGC
AGCTACAGCAATTGCAGCAGCTACAGCACCTACTACAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGTTGAGACAGCAGCAACATTCGGAGGGACCCTC
GAGCCTGCTTCAGCAATTGTTAATGGGCGGCGATGGCAGCAGCAGCAGCA
GCAGCAACAACAACAGCAACAACAGCATCAGCCATAGCACCCACAGCCCC
CTCACCGCTCTGTCCGGCTCCTCCTTCTCCACTCCCTCCCCCCTCTCCTC
CCCTCTCCTGCAATACCAACAAATGCTGCTCCAAGgtctacccccccccc
ttccaccctccctccctctcacgacatcccgaccgagtctctttctgctc
cagcggcagcagcaacaacaataacgacgacaccgccgataacagcagca
gcaacgacaacaacaacaaccacaacagCGGAAGAAGGAGGGAGGATTTT
CAGGCCTCGAAGGGTAACGAAGGGCCAGGTTGGGAGATTGTGGGTGGTGG
ATACGTATAGTCGACAACAAGCAGgtgagcagggagggaggaatggaggg
aggcatggagggagggcggggaatacgataacgagaaacagcgaagcgaa
tacgtaagggcgggatggcgggagggattgcggggaggagaaagagtatc
gttcatctctcacacctgcgcgtgcttggacagGTCGGGTGAGGCCCAAG
GCGGATTTGATGGTGCAATGGGAAGCGCCGTATTCCCTCCTCTACCAGCT
CGAGCAGCCGGAAATTGCCTTGTTTCGGCTGGGGGTAGCAAGCAACACCA
ACGCCGTCATCAGCAAAACCATTGTCATCAAACCCTCTCCCCCTCCTCCT
CCTTCGGGCCCCCTCTCCAGCCCTTCCTCCGCCAAAGGCACGCTGACATT
CTACGCTCCCCGGTCAGCAGGTGTTTTTGTTTTCAGAATGTTTGATGGTG
GAGACCCCGCGGCTACCCATGGCACATCCCATGCTTTTGTTGTGGAGGTG
CAGGGGAGGGACGTGGAGGGGAATTTACGGTTGATTTCCACTCAGTTAAG
GGAGAGGAAGACGGTCGTGGCGGGTTTGTCACAGCTGGGGGTGTTGCTAA
AGGAATTACGGCCCATGCAGCCAGGGAGGCAATTTAACACCTTGCTGTGG
ACATGCCTGCAGTGGTCGGTGAAGCAAATCAAAGAGGGTGGGGAGGAAGA
GGGGAAGGAAGGAGAGAAGACGAGGAGTCGATATCCAATCATAGCAGGGG
TGGCCTCAGTGTTGCAGGCGGCGTTAGGGAATCGATTTGTGTTTTCGTGT
CTTGATGCCGGTCAACGGGCGTTCCTCCTGGGAGCAGAAGCACTCTGGTG
TCCATTCAATGAAGAATTTTTCCCCTCTCCGGCGGCCAAGCACGCGCATT
ACCTTGAGCAGTGGCAGGTGGATTTTATTCCCACCCCTCTTGATGCCATC
CCTCCCTCCGTGATTGAAGCTCTGACTGTGGAAATGAATGCCCTCCTTCC
CGCCCTTTACCCTTCCGCCACTTTTTTCCAAACCCGAGAGGAAGTGAGGC
AGAGGATTGAGGCGTTGCTCCCTTCTCTCGGTGACGAAATATTTCCGCCA
GGTACTCGCTTACGTGTGTTTGGGTCGAGTGCCAATAATTTCGGAAACGA
CGCGGCGGATCTGGATATGTGTGTCACGTTTCCAAACGTTGGAGAAGGAG
GAGAGGGAGGAGCAAGAGCAGGAGGTGCAGCAGGAGCAGGGGACATGATT
GAGGCGCTGGCGGCCTTGTTGGAGGAGGAAGGGATGGAGGACGTGGTTCC
GAGGCCGACGGCACGAATCCCGATTGTGCTCTTCACGGACCCCAAGACCG
GCTTGGATTGCGACATCTCCGTGGAGAATCCCCTGGCATTGAGAAACACC
CAGTTACTTCACCAGTACAGTCGCATCGATCCCCGCGTTCGGGCTTTGGC
ATATACAGTGAAGCATTGGGCCCGTGCCCGGAAGATAAACAATGCAAGTG
GAGGGACGTTATCGTCGTACGCGTACATATTGATGGTACTGCATTTTCTG
CAGAGTGCTGCGGCGGGCGTTGGGGGTGGGGGTAAGGGAGGAAGAGACGG
ACTAGAGCCGGTGCCGGTTGTGCCAAATTTGCAGTTGTTGCCCCCTGATT
GGGGAGGGAGGGAGGTGGATAGACGGGAATTGCTGAGAGGACGAAGGCAT
TTGCCCCATGTGCTGGTAAAGCACCCCTTGGAGGGGGTAGAAGTTGACAC
ATATTTTTACACAGAGGACAGAGAAAGGGAAGGAGGGGGAGCAGAGTTGT
TGAAGCAATATGCGAAGAGAAATGAGGCATCGGTGGGGGCGTTGCTGGTG
ACGTTTTTCCAGTATTACACTTGGGAATTTGACTACCGAGAACATGTGCT
TAGTGTGAGGATGGGGGGGTTGCTGAGGAAGGAGGAGAAGGCGGAGGAGG
ATGGGTGGGCGGTGAATTCCAGGTTGGCCGTCGAAGATCCGTTTGAGACG
TGGTATAACGTAACGCATTTTTTGAAGGAAGGAAAGCATCGGCACATCCG
GCAGGAGTTCGCAAGGGCGTATGCATTGTGTGTGGAGGAAGGGAGTAGGG
AACACGGCGGGGGGAAAGGAGGAGGGCTGTTGGCCAGAATATGTGAGGAG
GCTCCTGATCCGCCCATGAGGAAGCAAACCATGGAGGATGAGGAAGGGTT
ATTGCTGGCATCTATGCAGGCGTTGGGGATCGGGGGGGAAGGGGGCGAGA
AAGGGAAGGGAAAAGGAGAAAGAGAAGGAGAGGGAGAAATAAAAGTAGTT
GGAGACGGGGACGGAGAAGGGGGACAGGCGGTAGCGTCGATTGGTCTGCC
TGTAAATGCAGCGGAGGGGGAAGTGCCATTGGCAGTAGCGTAG
back to top

protein sequence of NO10G01040.1

>NO10G01040.1-protein ID=NO10G01040.1-protein|Name=NO10G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1262bp
MHHQRWRGGGGKSDEDVLIAFMKLVREGHPVAVEAQNRYQRDNDQQTFLA
TARALLDGGGGEAGTAPPPQQQQQQQQQQQQNGGEDFAVQQHQLQQPPRS
SISVLEALRGGGGGDGGEEQQQQQQLQHQQQQPQQPPHSMGLLGNGEGNL
PGFDLFSAMAAEASGQQGPGGRGVVEGGQAPSLPPPNLLGNMMLGNYQLP
PFLPQEEQQGASSISQQQQPSPFAYLPQGQQKLQPPQSHMMLNVPSHLHT
GHGMMGMSPSGEGREGRGGSFEMGEGPPHPHMFMHPPNPIPPHLLAGLLG
PGAGGGEGGGEGGGGGGLPGSGAGGRGRDRENGEHHQLFQQRGEYQQQQQ
QLYSQQQQRQQQQLYNQQQQQSPSLPPLLGEGSPYDCPSRINQLQQWQQL
QQLQQLQHLLQQQQQQQQQQQLRQQQHSEGPSSLLQQLLMGGDGSSSSSS
NNNSNNSISHSTHSPLTALSGSSFSTPSPLSSPLLQYQQMLLQAEEGGRI
FRPRRVTKGQVGRLWVVDTYSRQQAGRVRPKADLMVQWEAPYSLLYQLEQ
PEIALFRLGVASNTNAVISKTIVIKPSPPPPPSGPLSSPSSAKGTLTFYA
PRSAGVFVFRMFDGGDPAATHGTSHAFVVEVQGRDVEGNLRLISTQLRER
KTVVAGLSQLGVLLKELRPMQPGRQFNTLLWTCLQWSVKQIKEGGEEEGK
EGEKTRSRYPIIAGVASVLQAALGNRFVFSCLDAGQRAFLLGAEALWCPF
NEEFFPSPAAKHAHYLEQWQVDFIPTPLDAIPPSVIEALTVEMNALLPAL
YPSATFFQTREEVRQRIEALLPSLGDEIFPPGTRLRVFGSSANNFGNDAA
DLDMCVTFPNVGEGGEGGARAGGAAGAGDMIEALAALLEEEGMEDVVPRP
TARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRVRALAYT
VKHWARARKINNASGGTLSSYAYILMVLHFLQSAAAGVGGGGKGGRDGLE
PVPVVPNLQLLPPDWGGREVDRRELLRGRRHLPHVLVKHPLEGVEVDTYF
YTEDREREGGGAELLKQYAKRNEASVGALLVTFFQYYTWEFDYREHVLSV
RMGGLLRKEEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQE
FARAYALCVEEGSREHGGGKGGGLLARICEEAPDPPMRKQTMEDEEGLLL
ASMQALGIGGEGGEKGKGKGEREGEGEIKVVGDGDGEGGQAVASIGLPVN
AAEGEVPLAVA*
back to top
Synonyms
Publications