jgi.p|Nanoce1779_2|554375, gene_4113 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|554375
Unique Namegene_4113
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:867200..870204 -

Link to JBrowse

Properties
Property NameValue
TranscriptId554461
ProteinId554375
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:867200..870204 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050265RNA uridylyltransferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01040NO10G01040Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554375mRNA_4113-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554375mRNA_4113Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|554375

>mRNA_4113-protein ID=mRNA_4113-protein|Name=jgi.p|Nanoce1779_2|554375|organism=Nannochloropsis oceanica|type=polypeptide|length=854bp
MAAAAAAATTTATTASAIAPTAPSPLCPAPPSPLPPPSPPLSCNTNKCCS
KVYPPPPSTLPPSHDIPTESLSAPAAAATTITTTPPITAAATTTTTTTTA
EEGGRIFRPRRVTKGQVGRLWVVDTYSRQQAGRVRPKADLMVQWEAPYSL
LYQLEQPEIALFRLGVASNTNAVISKTIVIKPSPPPPPSGPLSSPSSAKG
TLTFYAPRSAGVFVFRMFDGGDPAATHGTSHAFVVEVQGRDVEGNLRLIS
TQLRERKTVVAGLSQLGVLLKELRPMQPGRQFNTLLWTCLQWSVKQIKEG
GEEEGKEGEKTRSRYPIIAGVASVLQAALGNRFVFSCLDAGQRAFLLGAE
ALWCPFNEEFFPSPAAKHAHYLEQWQVDFIPTPLDAIPPSVIEALTVEMN
ALLPALYPSATFFQTREEVRQRIEALLPSLGDEIFPPGTRLRVFGSSANN
FGNDAADLDMCVTFPNVGEGGEGGARAGGAAGAGDMIEALAALLEEEGME
DVVPRPTARIPIVLFTDPKTGLDCDISVENPLALRNTQLLHQYSRIDPRV
RALAYTVKHWARARKINNASGGTLSSYAYILMVLHFLQNGLEPVPVVPNL
QLLPPDWGGREVDRRELLRGRRHLPHVLVKHPLEGVEVDTYFYTEDRERE
GGGAELLKQYAKRNEASVGALLVTFFQYYTWEFDYREHVLSVRMGGLLRK
EEKAEEDGWAVNSRLAVEDPFETWYNVTHFLKEGKHRHIRQEFARAYALC
VEEGSREHGGGKGGGLLARICEEAPDPPMRKQTMEDEEGLLLASMQALGI
GGEGGEKGKGKGEREGEGEIKVVGDGDGEGGQAVASIGLPVNAAEGEVPL
AVA*
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Synonyms
Publications