NO10G00910, NO10G00910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00910 vs. NCBI_GenBank
Match: XP_009526435.1 (hypothetical protein PHYSODRAFT_346157 [Phytophthora sojae] >EGZ17377.1 hypothetical protein PHYSODRAFT_346157 [Phytophthora sojae] >ETI45489.1 hypothetical protein F443_09921 [Phytophthora parasitica P1569] >ETK85441.1 hypothetical protein L915_09718 [Phytophthora parasitica] >ETL38885.1 hypothetical protein L916_09622 [Phytophthora parasitica] >ETL91990.1 hypothetical protein L917_09545 [Phytophthora parasitica] >ETM45288.1 hypothetical protein L914_09588 [Phytophthora parasitica] >ETO74148.1 hypothetical protein F444_10016 [Phytophthora parasitica P1976] >ETP15313.1 hypothetical protein F441_09870 [Phytophthora parasitica CJ01A1] >ETP43389.1 hypothetical protein F442_09824 [Phytophthora parasitica P10297]) HSP 1 Score: 294.7 bits (753), Expect = 2.200e-76 Identity = 152/194 (78.35%), Postives = 167/194 (86.08%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDS-TVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKA--TKRGCC 203 + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LED TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TN +SF GAKSWVKELQRRGDP+V+IALAGNKADL +RRKVE +EA +YA +N +LH+ETSAK A NVK LFV IAKRLPK EREAFPI P+A +K GCC Sbjct: 5 KTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKADL-EARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPITPPQASKSKSGCC 197
BLAST of NO10G00910 vs. NCBI_GenBank
Match: XP_024586814.1 (rab family gtpase [Plasmopara halstedii] >CEG50445.1 rab family gtpase [Plasmopara halstedii]) HSP 1 Score: 293.9 bits (751), Expect = 3.800e-76 Identity = 152/194 (78.35%), Postives = 167/194 (86.08%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDS-TVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKA--TKRGCC 203 R CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LED TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TN +SF GAKSWVKELQRRGDP+V+IALAGNKADL +RRKVE +EA +YA +N +LH+ETSAK + NVK LFV IAKRLPK EREAFPI P+A +K GCC Sbjct: 5 RTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFVGAKSWVKELQRRGDPNVVIALAGNKADL-EARRKVEYEEAHQYAEDNDILHMETSAKTSVNVKDLFVAIAKRLPKNPPQPEREAFPITPPQASKSKSGCC 197
BLAST of NO10G00910 vs. NCBI_GenBank
Match: CCA18260.1 (Rab5 family GTPase putative [Albugo laibachii Nc14]) HSP 1 Score: 290.0 bits (741), Expect = 5.500e-75 Identity = 148/193 (76.68%), Postives = 166/193 (86.01%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDST-VKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATK-RGCC 203 + CHFKLVLLGDTAVGKSCLVVRFVR+EFFEYQEPTIGAAFLTQ V L+D VKFEIWDTAGQERYRSLAPMYYRGA+AA+VVYD+TN +SF GAKSWVKELQRRGDP+V+IALAGNKADL SRRKV+ +EA++YA +N +LHLETSAK A NV+ LF+ IAKRLPK + ERE FPI P TK RGCC Sbjct: 20 KTCHFKLVLLGDTAVGKSCLVVRFVRNEFFEYQEPTIGAAFLTQTVDLDDEVMVKFEIWDTAGQERYRSLAPMYYRGAAAAVVVYDVTNKDSFIGAKSWVKELQRRGDPNVVIALAGNKADL-ESRRKVDSEEARQYALDNDILHLETSAKTANNVQDLFIAIAKRLPKNLPQQERETFPITPPITTKQRGCC 211
BLAST of NO10G00910 vs. NCBI_GenBank
Match: XP_008869324.1 (hypothetical protein H310_06152 [Aphanomyces invadans] >ETW02719.1 hypothetical protein H310_06152 [Aphanomyces invadans]) HSP 1 Score: 290.0 bits (741), Expect = 5.500e-75 Identity = 148/195 (75.90%), Postives = 167/195 (85.64%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDS-TVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAP---KATKRGCC 203 + CHFKLVL+GDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V ++D TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TN +SF GA SWVKELQRRGDP+VIIALAGNKADL SRR V+ +EA++YA++NG+LH+ETSAK A NVK LFV IA+RLPK EREAFPI AP K + GCC Sbjct: 5 KTCHFKLVLIGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSMDDGVTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAMSWVKELQRRGDPNVIIALAGNKADL-ESRRTVDFEEARQYASDNGILHMETSAKTAANVKDLFVAIAERLPKNPPQPEREAFPITAPPSQKPARGGCC 198
BLAST of NO10G00910 vs. NCBI_GenBank
Match: XP_009844965.1 (hypothetical protein H257_17771 [Aphanomyces astaci] >ETV65477.1 hypothetical protein H257_17771 [Aphanomyces astaci]) HSP 1 Score: 289.7 bits (740), Expect = 7.200e-75 Identity = 148/195 (75.90%), Postives = 166/195 (85.13%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDS-TVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAP---KATKRGCC 203 + CHFKLVL+GDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V ++D TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TN +SF GA SWVKELQRRGDP+VIIALAGNKADL SRR VE +EA++YA +NG+LH+ETSAK A NVK LFV IA++LPK EREAFPI AP K + GCC Sbjct: 5 KTCHFKLVLIGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSMDDGVTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAMSWVKELQRRGDPNVIIALAGNKADL-ESRRTVEFEEARQYANDNGILHMETSAKTAANVKDLFVAIAEKLPKNPTQPEREAFPITAPPSQKPARGGCC 198
BLAST of NO10G00910 vs. NCBI_GenBank
Match: CCI45927.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 288.9 bits (738), Expect = 1.200e-74 Identity = 149/193 (77.20%), Postives = 166/193 (86.01%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVL-EDSTVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKATK-RGCC 203 + CHFKLVLLGDTAVGKSCLVVRFVR+EFFEYQEPTIGAAFLTQ V L E+ VKFEIWDTAGQERYRSLAPMYYRGA+AA+VVYD+TN +SF GAKSWVKELQRRGDP+V+IALAGNKADL SRRKV+ +EA++YA +N +LHLETSAK A NV+ LFV IAKRLPK + ERE FPI P TK RGCC Sbjct: 5 KTCHFKLVLLGDTAVGKSCLVVRFVRNEFFEYQEPTIGAAFLTQTVDLDEEVMVKFEIWDTAGQERYRSLAPMYYRGAAAAVVVYDVTNKDSFIGAKSWVKELQRRGDPNVVIALAGNKADL-ESRRKVDSEEARQYALDNDILHLETSAKTANNVQDLFVAIAKRLPKNLPQQERETFPITPPITTKQRGCC 196
BLAST of NO10G00910 vs. NCBI_GenBank
Match: XP_008613680.1 (Ras-like protein Rab-5A [Saprolegnia diclina VS20] >EQC32994.1 Ras-like protein Rab-5A [Saprolegnia diclina VS20]) HSP 1 Score: 286.6 bits (732), Expect = 6.100e-74 Identity = 148/193 (76.68%), Postives = 165/193 (85.49%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDS-TVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPII-APKATKRGCC 203 + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L+D TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TN +SF GAKSWVKELQRRGDP+VIIALAGNKADL +RRKV+L+EA++YA EN +LH+ETSAK A NVK LFV IA++LPK ER+AFPI K GCC Sbjct: 5 KTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSLDDGMTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVIIALAGNKADL-EARRKVDLEEARQYAEENEILHMETSAKTAVNVKDLFVAIAQKLPKNPQQPERDAFPITPVTPPKKNGCC 196
BLAST of NO10G00910 vs. NCBI_GenBank
Match: OQR81164.1 (Rab5 family GTPase [Achlya hypogyna]) HSP 1 Score: 285.4 bits (729), Expect = 1.400e-73 Identity = 148/193 (76.68%), Postives = 164/193 (84.97%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDS-TVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPII-APKATKRGCC 203 + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L+D TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TN +SF GAKSWVKELQRRGDP+VIIALAGNKADL +RRKV+L+EA+ YA EN +LH+ETSAK A NVK LFV IA++LPK ER+AFPI K GCC Sbjct: 5 KTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSLDDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVIIALAGNKADL-EARRKVDLEEARAYAEENEILHMETSAKTAVNVKDLFVAIAQKLPKNPQQPERDAFPITPVTPPKKNGCC 196
BLAST of NO10G00910 vs. NCBI_GenBank
Match: OQS00159.1 (Rab5 family GTPase [Thraustotheca clavata]) HSP 1 Score: 285.4 bits (729), Expect = 1.400e-73 Identity = 147/193 (76.17%), Postives = 165/193 (85.49%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDS-TVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPII-APKATKRGCC 203 + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L+D TVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TN +SF GAKSWVKELQRRGDP+VIIALAGNKADL +RRKV+L+EA++YA EN +LH+ETSAK A NVK LFV IA++LPK +R+AFPI K GCC Sbjct: 5 KTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSLDDGMTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVIIALAGNKADL-EARRKVDLEEARQYAEENEILHMETSAKTAVNVKDLFVAIAQKLPKNPQQPDRDAFPIAPVTPPKKNGCC 196
BLAST of NO10G00910 vs. NCBI_GenBank
Match: XP_002895829.1 (Rab5 family GTPase, putative [Phytophthora infestans T30-4] >EEY54592.1 Rab5 family GTPase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 278.9 bits (712), Expect = 1.300e-71 Identity = 147/194 (75.77%), Postives = 163/194 (84.02%), Query Frame = 0 Query: 12 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDS-TVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLASSRRKVELKEAQEYAAENGLLHLETSAKDAQNVKALFVEIAKRLPKAVVPVEREAFPIIAPKA--TKRGCC 203 + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LED TVKFEIWDTAGQ +LAPMYYRGA+AAIVVYD+TN +SF GAKSWVKELQRRGDP+V+IALAGNKADL +RRKVE +EA +YA +N +LH+ETSAK A NVK LFV IAKRLPK EREAFPI P+A +K GCC Sbjct: 5 KTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWDTAGQ---GNLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKADL-EARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPITPPQASKSKSGCC 194 The following BLAST results are available for this feature:
BLAST of NO10G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00910 ID=NO10G00910|Name=NO10G00910|organism=Nannochloropsis oceanica|type=gene|length=1178bpback to top protein sequence of NO10G00910.1 >NO10G00910.1-protein ID=NO10G00910.1-protein|Name=NO10G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=203bpback to top Synonyms
Publications
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