NO10G00710, NO10G00710 (gene) Nannochloropsis oceanica

Overview
NameNO10G00710
Unique NameNO10G00710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5660
Alignment locationchr10:233927..239586 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:233927..239586 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0031929TOR signaling
GO:0031929TOR signaling
Vocabulary: Cellular Component
TermDefinition
GO:0031932TORC2 complex
GO:0031932TORC2 complex
Vocabulary: INTERPRO
TermDefinition
IPR028268Pianissimo_fam
IPR029452RICTOR_V
Homology
BLAST of NO10G00710 vs. NCBI_GenBank
Match: EWM19935.1 (hypothetical protein Naga_102914g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 93.6 bits (231), Expect = 6.200e-15
Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 0
Query: 1559 VEDEILSLIIQLSNYVTRKDAQHRLIRLRRKSRYRQKFESLRFFLRVQEVMGVYAFKVPVRRFLTELFGSVDLFSTSGWGGLRERGEGEEGKE 1652
            VE EIL  I++LSNYVTRK AQ +LI+LR    YR+KF SL F++RV+ +MG Y F VPVRRF++ELF  VD  S+  WG +    E E G+E
Sbjct:   14 VEAEILGSIMELSNYVTRKTAQQKLIQLRSIPCYREKFTSLSFYVRVRSLMGRYVFNVPVRRFVSELFAHVDWASSEAWGEVARAREEEGGRE 106          
The following BLAST results are available for this feature:
BLAST of NO10G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM19935.16.200e-1554.84hypothetical protein Naga_102914g1, partial [Nanno... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000929NSK000929Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00710.1NO10G00710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586717gene_4149Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00710.1NO10G00710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00710 ID=NO10G00710|Name=NO10G00710|organism=Nannochloropsis oceanica|type=gene|length=5660bp
ATGGATAGTGAGAGTGACAAAAGGGTGATCCATGGCCAGCAGGGGCACAG
GCGTGGGAACGGCTTCGCTCCTCCTCCTCCTCATCGACTACCATCTCCTG
CTCCCCCCTCCTTCATTCCCTCTTGCAGTCCCCCGCTCAACTTGCTGGAC
CCCTACCTCTCCGTCCTCCTCTCCCTCCTCCTCCAATGTAACATCCTCGA
GGCGCTTACCAGCCTCTGTGTAAGCGGTCCTACCGAAGATCTTTCTCAAG
GAAGAGCGACTGCCCTTCTCGTAGAGATTATGCGTGTCCTCTCCCTTGTC
CTCCCTGGGCACCTCGCCCTCGCTCATCAAGCTATGCCTTCTTTGGTGAA
GATGTGCGACGCCGCTACAGCTGCTCCTGACGTGGCTTTCGCAGGGGAAG
TTGGAGCATCAGGAAAAGACATGGGCGAAGGGGGAGGAGAGAAAAGGGGA
AGAATACGAGGGGTACGGAATTTCTCGACGCTCTCCAGTATCGATGCCCG
TCTTCTCTCCATGCGTGCTTCCGAATTACTGAGGCGCTTGTGTTCCTCCT
CCTCTATGTCCCCTACCTCCTCCTCCTTTCCTTCCTCCATTTGTCCGTCT
TCCCTTCCTTCCTCCTTCGTGCCAAGGGCATGTACTTCTTCCCACGGAGT
CTCCACCGCCTCCTCTCTTTCTCCTCTCCCCCACTTAGTCGACGGCGGCA
AGGGCAGTAGCAGATATATCTCCTCTCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAAGCGTATTGTGTCCTAGGCACTGTGCGAGAGGAAAT
GTGGGGAGTACGGGCTCGGCTTCGTCGGCAGCACCAGCACCAGCAGCAGC
ACCAGCAGTTCTCGTCCTCCTTTCCTCTTACCTCCCACCACCAAGGCCGC
CGCCGTCAGTGGGACGAGGAGGATGACGAGGAGGCAACCGCGGAAGACTC
CATCCTCCTTATCTTTCCCTTCCTCGATTCCCCCCCAGACCAGTCAATGT
ACGAGATTTGTCTCACCCGAAGCCGTGTCCTTGACACGCAGAACGCGCAA
CTCTGGGAATGGGAGCCCATCCACCTCCTCCTCCACGACATCCTCCCCCA
TCGACCCTTCCTCCTTCACGCCCTCCAGCACCACCCACTCTACTTCCGTC
GCCTGGGGGACAGTTTTCGTCTCCTCCCCGGAGCAGGAGGGGCAGCAGGG
GAAGAAAGTGAAGGGCGCTTCTTGCCGGACCAACCGTGGGACCTGCCCTC
CCTCCCTCGGTACCTCTCTCTCCTCTCAGGCgtctatcgctgcttgtcac
gctatccggaagggaggatcttccttcagactgaagcaaggctcctcaag
ccacttcacgagctcatcttgctcctacagctcaccctccaacggcagtt
cctctccccctcctcttcctccctcccccccatgcccgccctatccattc
tccggaccccctccccccaccatccgcaccctccatccctccttcaccct
cctcctcgcgccgaccccttctatacctccaatccccttctcctctgcct
ccgcctcctcctcttctctcctacccatcatcttccatccacccccccac
cctctccctgctcgatcccgtctcctgcctccggacctttacccgggaat
acctgtccctccttccatccctccctccatccctccttccatccctcttt
ccccttcttcgccagCTCGGTCAACGTCCTGACTTGGCCTACATTTCCCG
TGTCCTCATCCTTCAGTTTCCCCCTTCTGCCTTTCTGAAGAGCTGCGGCA
CCACGACCAGAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGAAAAGTTTCAGGGGCGTAGGAAGGGAATGGCTGGAGAGATGGAT
CGGAAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGGCGTTTCAGT
CCTTGCGATTGATGGCTGTGAATATCCTGAGGGTATTGCTTCTTGACCCT
CCGACGAGAAATGAAGGGGAAGAGGGAGGGAAAGTACAGGGAGAGGATGG
GGTCGAAGAGGAGGACGAGAAAGGAGGGGAAGACGAGTTTGAGGAATGGG
CGATAGGACTGTTGGTCGGGCTAGCACATGCCTTCCCCGAGAATGACGCT
GCTTGTGCGGCAGCTATCTTAGTCTTGGAGGAAATGATTATACGACGACC
TTCCTTCTACCTCCCTCTCATTGCATCCAACTTCCCTTTGTCCTCACCCT
CCTTCCCTCCTTCCCTCTCCAACATGGCGCGGAGGCAGAGCGAGGCGAAG
GAGGAAGGAGGCGTGGCAGTAGTAGTGGCAGCAGCACCCGCAATAGGCGA
AAAGACCATCTCTGCTACCGCCACATCCACTACCACAAGCAAAAGCAGCG
GCAGCAGCAGTAGTAAGAACGACAGGAGCAGTACGACAAACACCTGTGAC
AGCAATTACTACAGAAGGATGCAGCCTCTTTTCCTCCGCTTTCTGGGATG
CGAGGCGGGGATAACATTCCTCAAAAAATCCGGTTGGCTCAATAAAATGA
TGCTTCCACAGGAAGAAGGGGGGAAGGGAGGGATGGGGGGCTGGGCGCTT
GTAACCCCGGGGGAGGGAGAGGGGGGGGGGGGGGGGAAGGAATTTCACGC
AGAGGCAAGGGGAAGGGGAGGTTTATCGATATGTTGCACGAGTGCAGCGG
CAGCTCCTGCGGGCAgtgaatgcgatgagccatctctccttgtcctcctc
ccctccctccccccctttaatcgtcctcaggtgcccccctggtctccttc
ccagtttctctcgaggagaggggggtagaagggagggaggaggacctgtc
actacagcaactgacctccgcactcttctatctttgccctggaacgttca
gGTGCAGGCGTTCAACGAAAGCGTGACTCCCTTAGTGGCCGGGGGAGGGA
GGGGGGGGGGAGGGACGGAGGGAGGGCCTTGATGGGGCTGGCGACGGCAA
GTCATGCAGTAGAGCTGCTGGTGGACACTGCCGTTGATCTTACAGGAGGC
GTTTACCCCCTTTCCTGCTCCACCATTCACGGCAACCAGGACATTGACAA
CAACACCACCACCACCACCACCAGCAGCCAATACAATAATAGCCCACGTT
TCCGCATCCGCGCTCTGCTCCTCGACCCTACCACCGGCAAGCCCACCCCC
TTTCCTCTCTCGTCTGCTCACTCCCTCCGTGCCTGCCTCCGGCTCGGGAA
TTCGTTCGTGGACCGCAACGGGCAACTCATCCACCCCTCCCCCCCTTCCT
CCCTCACTTCATCCATTCCTGCCTCTATGTCCCATCTTGGCTCCTACTCC
AACGCCCCTGGTACTCCTACAGCAGCAGCAGCAGCAGCAGCAGCAGAAAA
GAAGAGAAGAGGCAGTGCCGGCACGCCTCTCTCTCAACGGATAAAGGAAC
GTCTGCTCGCCGGCACCAGCACCAGCAATAGGACCAGCAGCGACTCACAG
GGTCAACGAGACTCCCTCTCCTCCCCTTCCTCCCTCCAGCTCTCCCCCCC
TCCATCCCTATATCGCTGTTCCTCCGATCCCACAGTAGCAATGAATCATC
AGCAGCAGAGATCGCACTTGTCCCCCTGCGGTAACATGATGATAAACGGT
CCTTCCTCCCCTCCCTCCTTCGCTTCCTCCCCGACCTCCTACCTGGGCCC
TGCCGCAGAAGAGGACGAGCACCAAGCCGACTGGTCCGTCTGCCGCCCTT
GGCAACGCATACAGCAGCAGCAGCAGCACGATACGCACGAAGCACAAGGG
GGGGAAAGAGGGGCAGTATTCTACAACGTCACCACCAGAGACGATCCGGG
AACGTGGACTTTTATCTCCCGGGAAGGGGGAGTTGGAGTAGTAGGAAAGG
AGGGAAGGAAGGAGGGAAGGGTGGTTGGAACACCTACAGGTGGAACCGTT
CCGGCAGAGGCAGTTGAACGGGCGGCAGGAACAGCAGAAGGAGAGAGGGA
GGGTGGAGAGGGTTCGGTCTCTCCTGGCTTGAAGCTGCACCGCTCGTTTT
CTTCTGGGCAAGAGGATTCACTTAGCAGCCATAACGGAGGGAGAGAGGGG
GTGGGAGGCATGGAAGGAGGGGGAAAAAGAACACCAAAGGAAGGGATGGA
AGGAGGGAGGGAGGGAGGGCAAGTGCATCAGTTGGTGGCCGTGGAGTTTG
TTGTCGTGTTGGATGACCGAGAAGGAGGCGAGAAAGAGGAGAACGAGAGA
GAAGGGAAGAAGGAAGGAGGGAAGGAGGGGGGAAGGGAGGGGAGGGAGAG
GGAAGGTGTGGTGGCCCCCATGCCGGTACATGCATACGGGGAGTTAGTGA
AGACGGAGATGGGCCGTCTTTTCCTGAGGGAGAGTGGACTCCTTGCGCAG
TTGCTGGCGCATTGCCACCATGATAGTGATGATGGTGACAATTCTACTAC
TGCTGTTCCTGCGGTCGAGGAAGGAGGTAATCACGTGCCCTTCCAAAACA
CAGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCTGTAGGA
AAGAGCGGGCACAGGGACCTGATGTATCCTTCTCCCTCTTCGTCTACCAA
CCCAGCAGCCACAGAGGCCTTGCTGTGGGCCCTTGGACATACCTGCTCAA
CCGACGCCGGCCTCCGCCTCGTCCTCAGTCTCGCTCCTCGAGCGGTCGCC
TTCCTGTGCACAACTGCGGAGACCCACCCGCGTCTCTCCGTGCGAGGGAC
GGGGGTGTGTGTGCTTGGTCTCGTGGCTGGTTCGGAACTGGGTAGGTGGG
AGCTGGCCAAGTGGGGGTGGGAGGGAGGGGGAGAAAGAGGAAGGGGGGCG
ATCGGGGGAAGGCTGGCGTTGCCGAAAGATTTGGGGAGGATGGTCCGAGT
GCGGGAGGGGGGAGAAGGGGAAAAGGAGGAGGATTTGGCGTCGAGTTTGA
CGCGGAGCTTGGGTGTTCCACCGGCGGTGCCATCCCGTCCTTCTCCGTTC
CCAACGCCGTCTCGGTACTTGTCTTCTCCCACCCCGAATTCAGTCGTGCG
TGGAGGGAGGGAAGAAGGAGAAGAAGGGGGAGGGGAAGGTGTCGGAAGGG
AGGACGGGGGGATCGCCGGAACTTCACCCTCTGTCTCTCCACCTCTACCC
CTTCCCCTTCTTCTTCAGCAGCAGCAGCAGCAGCAGTCCTCGCAGCGTCG
TGCCGCCCCTCTGCCAGTTATTATAGAATGCGTTCCCAACAAGGAACAGA
AAGGAGAAAGGGAGGGGGAAAGGGAGAAAGGGAGCAGTGACAGCGTGGAA
GACGAAATTCTATCACTGATAATTCAATTATCTAATTACGTCACGCGAAA
AGACGCCCAACATCGGTTGATTCGGCTACGGCGAAAAAGTCGGTACCGGC
AAAAATTTGAGTCGTTGCGGTTCTTTTTACGCGTGCAGGAAGTGATGGGC
GTGTATGCGTTTAAGGTTCCAGTGAGACGGTTTTTGACTGAGTTGTTTGG
GAGTGTGGACCTGTTTTCAACATCTGGATGGGGGGGGTTAAGGGAGAGAG
GGGAGGGGGAGGAGGGAAAGGAGTGATTGGTGATGGGTGTGTATTTGTTT
GAGAAAATAGTGGTAGAGGAGAGGATTAATGATGAAAGAATGAAGGGGAA
GAAAGGAAGA
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protein sequence of NO10G00710.1

>NO10G00710.1-protein ID=NO10G00710.1-protein|Name=NO10G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1652bp
MDSESDKRVIHGQQGHRRGNGFAPPPPHRLPSPAPPSFIPSCSPPLNLLD
PYLSVLLSLLLQCNILEALTSLCVSGPTEDLSQGRATALLVEIMRVLSLV
LPGHLALAHQAMPSLVKMCDAATAAPDVAFAGEVGASGKDMGEGGGEKRG
RIRGVRNFSTLSSIDARLLSMRASELLRRLCSSSSMSPTSSSFPSSICPS
SLPSSFVPRACTSSHGVSTASSLSPLPHLVDGGKGSSRYISSQQQQQQQQ
QQQQQAYCVLGTVREEMWGVRARLRRQHQHQQQHQQFSSSFPLTSHHQGR
RRQWDEEDDEEATAEDSILLIFPFLDSPPDQSMYEICLTRSRVLDTQNAQ
LWEWEPIHLLLHDILPHRPFLLHALQHHPLYFRRLGDSFRLLPGAGGAAG
EESEGRFLPDQPWDLPSLPRYLSLLSGLGQRPDLAYISRVLILQFPPSAF
LKSCGTTTRKQQQQQQQQQQQQQQKSFRGVGREWLERWIGKEGGREGGRE
GEAFQSLRLMAVNILRVLLLDPPTRNEGEEGGKVQGEDGVEEEDEKGGED
EFEEWAIGLLVGLAHAFPENDAACAAAILVLEEMIIRRPSFYLPLIASNF
PLSSPSFPPSLSNMARRQSEAKEEGGVAVVVAAAPAIGEKTISATATSTT
TSKSSGSSSSKNDRSSTTNTCDSNYYRRMQPLFLRFLGCEAGITFLKKSG
WLNKMMLPQEEGGKGGMGGWALVTPGEGEGGGGGKEFHAEARGRGGLSIC
CTSAAAAPAGSAGVQRKRDSLSGRGREGGGRDGGRALMGLATASHAVELL
VDTAVDLTGGVYPLSCSTIHGNQDIDNNTTTTTTSSQYNNSPRFRIRALL
LDPTTGKPTPFPLSSAHSLRACLRLGNSFVDRNGQLIHPSPPSSLTSSIP
ASMSHLGSYSNAPGTPTAAAAAAAAEKKRRGSAGTPLSQRIKERLLAGTS
TSNRTSSDSQGQRDSLSSPSSLQLSPPPSLYRCSSDPTVAMNHQQQRSHL
SPCGNMMINGPSSPPSFASSPTSYLGPAAEEDEHQADWSVCRPWQRIQQQ
QQHDTHEAQGGERGAVFYNVTTRDDPGTWTFISREGGVGVVGKEGRKEGR
VVGTPTGGTVPAEAVERAAGTAEGEREGGEGSVSPGLKLHRSFSSGQEDS
LSSHNGGREGVGGMEGGGKRTPKEGMEGGREGGQVHQLVAVEFVVVLDDR
EGGEKEENEREGKKEGGKEGGREGREREGVVAPMPVHAYGELVKTEMGRL
FLRESGLLAQLLAHCHHDSDDGDNSTTAVPAVEEGGNHVPFQNTAAAAAA
AAAAAAAAVGKSGHRDLMYPSPSSSTNPAATEALLWALGHTCSTDAGLRL
VLSLAPRAVAFLCTTAETHPRLSVRGTGVCVLGLVAGSELGRWELAKWGW
EGGGERGRGAIGGRLALPKDLGRMVRVREGGEGEKEEDLASSLTRSLGVP
PAVPSRPSPFPTPSRYLSSPTPNSVVRGGREEGEEGGGEGVGREDGGIAG
TSPSVSPPLPLPLLLQQQQQQQSSQRRAAPLPVIIECVPNKEQKGEREGE
REKGSSDSVEDEILSLIIQLSNYVTRKDAQHRLIRLRRKSRYRQKFESLR
FFLRVQEVMGVYAFKVPVRRFLTELFGSVDLFSTSGWGGLRERGEGEEGK
E*
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Synonyms
Publications