NO10G00640, NO10G00640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00640 vs. NCBI_GenBank
Match: EWM25297.1 (splicing factor 3a [Nannochloropsis gaditana]) HSP 1 Score: 720.7 bits (1859), Expect = 3.500e-204 Identity = 432/556 (77.70%), Postives = 473/556 (85.07%), Query Frame = 0 Query: 1 MSGMTLERARASHEDIEAYEAAIVAILEDKPRTNKERIWQQNRVANLIGQIQARSQDLLNIYLDKHGVMKEEVASLRGRDAFPTFYSRLDAAKEYHQKHPNLPVKHHPAVQEEAEPRLSFSGEEVWGKYLDLQALHMEFYSMPQTPKWDYQMYLEKFTDFSAVPSGKKNAAWARYVKNLYDYLFSFIQRTQPLLNIEDVVGGEGXXXXXXXXXXXXXXXXXFEALWQAGELPSGWPKPSTAGEGGREEGXXXKEEARPVDLSKFRAAEDVEVLGMERLKEGLVALGLKCGGTLKERATRLFSTKGKRKEDIDKKLWAGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQCAWVEYKIGLLVGEVLGEVIEATRKFVEKKQT--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLMVPNTKHFHDITTIKDALALYGRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 555 MSG+TLERARA+HEDIEAYEAAIVAILEDKPRT KER+WQQ+RV+NLI QIQ RS+DL IY D HG MKEE+A+LRGRDAFP+FY+R+D AKEYHQKHP++PVKHHP VQEEAEPR+SFSGEEV+GKYLDLQA HMEFY++PQTPKWDYQ YL + DFS VP+GKKNAAWARYV NLY+YL SFIQRTQPLLN+E+++ G FEALWQAG+LP GWP P A GG E+G E + VDL FR A+++EVLGM+RLK GL ALG+KCGGTL+ERA RLF+TKGK+KE+ID KL AG XXXXXXXXXXXXXXXXXXXXXXXX KKQCA E++I LLV EVL EV+EAT+KFVEKKQT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCL +PNTKHFHDITTIKDALALY RIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL Sbjct: 1 MSGLTLERARANHEDIEAYEAAIVAILEDKPRTAKERVWQQHRVSNLIEQIQGRSKDLEGIYEDVHGTMKEELATLRGRDAFPSFYARVDHAKEYHQKHPDVPVKHHPPVQEEAEPRVSFSGEEVFGKYLDLQASHMEFYALPQTPKWDYQTYLSRLADFSVVPAGKKNAAWARYVHNLYNYLLSFIQRTQPLLNVEEILDGN---VDGGEEGATKKAEAAFEALWQAGKLPGGWPVP--AQGGGEEKG---AENTKEVDLRGFRTAKELEVLGMDRLKAGLKALGMKCGGTLEERAARLFATKGKKKEEIDPKLLAG--XXXXXXXXXXXXXXXXXXXXXXXXDKEGGKGGEDGKKQCARWEFRIDLLVKEVLREVVEATKKFVEKKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLKIPNTKHFHDITTIKDALALYDRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 546
BLAST of NO10G00640 vs. NCBI_GenBank
Match: XP_005853408.1 (splicing factor 3A subunit 3 [Nannochloropsis gaditana CCMP526] >EKU22951.1 splicing factor 3A subunit 3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 720.3 bits (1858), Expect = 4.500e-204 Identity = 432/556 (77.70%), Postives = 473/556 (85.07%), Query Frame = 0 Query: 1 MSGMTLERARASHEDIEAYEAAIVAILEDKPRTNKERIWQQNRVANLIGQIQARSQDLLNIYLDKHGVMKEEVASLRGRDAFPTFYSRLDAAKEYHQKHPNLPVKHHPAVQEEAEPRLSFSGEEVWGKYLDLQALHMEFYSMPQTPKWDYQMYLEKFTDFSAVPSGKKNAAWARYVKNLYDYLFSFIQRTQPLLNIEDVVGGEGXXXXXXXXXXXXXXXXXFEALWQAGELPSGWPKPSTAGEGGREEGXXXKEEARPVDLSKFRAAEDVEVLGMERLKEGLVALGLKCGGTLKERATRLFSTKGKRKEDIDKKLWAGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQCAWVEYKIGLLVGEVLGEVIEATRKFVEKKQT--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLMVPNTKHFHDITTIKDALALYGRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 555 MSG+TLERARA+HEDIEAYEAAIVAILEDKPRT KER+WQQ+RV+NLI QIQ RS+DL IY D HG MKEE+A+LRGRDAFP+FY+R+D AKEYHQKHP++PVKHHP VQEEAEPR+SFSGEEV+GKYLDLQA HMEFY++PQTPKWDYQ YL + DFS VP+GKKNAAWARYV NLY+YL SFIQRTQPLLN+E+++ G FEALWQAG+LP GWP P A GG E+G E + VDL FR A+++EVLGM+RLK GL ALG+KCGGTL+ERA RLF+TKGK+KE+ID KL AG XXXXXXXXXXXXXXXXXXXXXXXX KKQCA E++I LLV EVL EV+EAT+KFVEKKQT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCL +PNTKHFHDITTIKDALALY RIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL Sbjct: 1 MSGLTLERARANHEDIEAYEAAIVAILEDKPRTAKERVWQQHRVSNLIEQIQGRSKDLEGIYEDVHGTMKEELATLRGRDAFPSFYARVDHAKEYHQKHPDVPVKHHPPVQEEAEPRVSFSGEEVFGKYLDLQASHMEFYALPQTPKWDYQTYLSRLADFSVVPAGKKNAAWARYVHNLYNYLHSFIQRTQPLLNVEEILDGN---VDGGEEGATKKAEAAFEALWQAGKLPGGWPVP--AQGGGEEKG---AENTKEVDLRGFRTAKELEVLGMDRLKAGLKALGMKCGGTLEERAARLFATKGKKKEEIDPKLLAG--XXXXXXXXXXXXXXXXXXXXXXXXDKEGGKGGEDGKKQCARWEFRIDLLVKEVLREVVEATKKFVEKKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLKIPNTKHFHDITTIKDALALYDRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 546
BLAST of NO10G00640 vs. NCBI_GenBank
Match: CBJ31751.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 419.1 bits (1076), Expect = 2.200e-113 Identity = 315/562 (56.05%), Postives = 387/562 (68.86%), Query Frame = 0 Query: 1 MSGMTLERARASHEDIEAYEAAIVAILEDKPRTNKERIWQQNRVANLIGQIQARSQDLLNIYLDKHGVMKEEVASLRGRDAFPTFYSRLDAAKEYHQKHPNLPVKHHPAVQEEAEPRLSFSGEEVWGKYLDLQALHMEFYSMPQ--TPKWDYQMYLEKFTDFSAVPSGKK--NAAWARYVKNLYDYLFSFIQRTQPLLNIEDVVGGEGXXXXXXXXXXXXXXXXXFEALWQAGELPSGWP--KPSTAGEGGREEGXXXKEEARPVDLSKFRAAEDVEVLGMERLKEGLVALGLKCGGTLKERATRLFSTKGKRKEDIDKK--LWAGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQCAWVEYKIGLLVGEVLGEVIEATRKFVEKKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLMVPNTKHFHDITTIKDALALYGRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 555 MS LERAR HED+E YE I+ LE KPRT KER+ QQ+R+ANL RSQ L IY D G M+EEVAS+RG+ TFY RL YH HP LPV P ++ E E ++ FSGEE++GK+ DL + + + ++PQ + DY +L+ F +P +K A+A ++ +L +YL F+ RTQPL+++++V+G FE W+AG LP GW + XXX R +DL KF A+++ LGM+RLKE L A+GLKCGGTL++RA RLFS KGK+ E+ID+K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Q A +E K+ L+ EV + +E+T++ V+K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IYNPLNLPLG+DGKPIPYWLYKLHGLGVE+KCEICG+ SY GRR FDRHFQEWRHAHGMRCL +PNTKHFHDI I+DA LY +IK+ L E ++ E EE+ED EGNVLNRRT++DLARQGL+ Sbjct: 1 MSSSLLERARGFHEDLEIYERGIIDQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQKVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLG---------------DTDSSFEEAWEAGTLP-GWTSGRXXXXXXXXXXXXXXXXXXPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLAALETKVKALL-EVQTDTLESTKRQVDK-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 540
BLAST of NO10G00640 vs. NCBI_GenBank
Match: OQR92055.1 (splicing factor 3A [Achlya hypogyna]) HSP 1 Score: 367.5 bits (942), Expect = 7.500e-98 Identity = 224/584 (38.36%), Postives = 297/584 (50.86%), Query Frame = 0 Query: 1 MSGMTLERARASHEDIEAYEAAIVAILEDKPRTNKERIWQQNRVANLIGQIQARSQDLLNIYLDKHGVMKEEVASLRGRDAFPTFYSRLDAAKEYHQKHPNLPVKHHPAVQEEA-EPRLSFSGEEVWGKYLDLQALHMEFYSMP-------------------QTPKW-----DYQMYLEKFTDFSAVPSGKK--NAAWARYVKNLYDYLFSFIQRTQPLLNIEDVVGGEGXXXXXXXXXXXXXXXXXFEALWQAGELPSGWPKPSTAGEGGREEGXXXKEEARPVDLSKFRAAEDVEVLGMERLKEGLVALGLKCGGTLKERATRLFST---KGKRKEDIDKKLWAGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQCAWVEYKIGLLVGEVLGEVIEATRKFVEKKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLMVPNTKHFHDITTIKDALALYGRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 555 MS TLE RA HEDIE++E AIV+IL +KPR +K R+ ++V+ L+ + ARS+D+L +Y DK G K+EV +L GR F +FY L +E+H+K+PN+ V H P+ E A +P + FSGEE +GKY+DL A H +F ++P +TP++ DY YL +F + + +P K ++ + Y+ L YL F +RTQPL++++DVV FE W G++ P T C K+ A+ T KGK+ +L AG +K A +E + L+G +L EV+ AT F+E KQT P YNPLNLPLG+DGKPIPYWLYKLHGLGVE+KCEICGNHSYWGRR FDRHFQ+WRHAHGMRCL +PNTKHFHDIT++ DALALY ++KEQL+ E ++ EEEFEDSEGNVLN++T+QDLARQGLL Sbjct: 1 MSSSTLELLRAGHEDIESFERAIVSILNEKPRNHKARVLHGHKVSQLLDNVTARSRDVLELYEDKEGAFKDEVDALHGRANFTSFYDHLKNIREFHRKYPNVEVIHEPSSLEAAMDPTVEFSGEERFGKYVDLHAYHTQFLNLPVFASVNKMKTADTTKMQRGRTPEYIDAPVDYITYLSRFGNLAKIPEAAKFVDSRYETYLTELRAYLTDFYRRTQPLVDLDDVVN---------------EAQAQFEKSWALGQVKGWAPAADTTA-------------------------------------------STYCKACQKQFASEAVFTGHLKGKKHLKAAAQLAAG-------------------------------GPAPDVRKALANLEVHVKTLIG-LLTEVVHATISFLELKQT----RTPEELQAEILEEEDDALSDVEIDNDNVDDDDEQPFYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGNHSYWGRRDFDRHFQQWRHAHGMRCLGIPNTKHFHDITSMADALALYEKLKEQLEKETWNKANEEEFEDSEGNVLNKKTYQDLARQGLL 490
BLAST of NO10G00640 vs. NCBI_GenBank
Match: PIA54849.1 (hypothetical protein AQUCO_00901027v1 [Aquilegia coerulea]) HSP 1 Score: 363.2 bits (931), Expect = 1.400e-96 Identity = 239/563 (42.45%), Postives = 321/563 (57.02%), Query Frame = 0 Query: 1 MSGMTLERARASHEDIEAYEAAIVAILEDKPRTNKERIWQQNRVANLIGQIQARSQDLLNIYLDKHGVMKEEVASL-----RGRDAFPTFYSRLDAAKEYHQKHPNLPVKHHPAVQEE---AEPRLSFSGEEVWGKYLDLQALHMEFYSMPQTPKWDYQMYLEKFTDFSAVPSG-KKNAAWARYVKNLYDYLFSFIQRTQPLLNIEDVVGGEGXXXXXXXXXXXXXXXXXFEALWQAGELPSGWPKPSTAGEGGREEGXXXKEEARPVDLSKFRAAEDVEVLGMERLKEGLVALGLKCGGTLKERATRLFSTKGKRKEDIDKKLWAGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQCAWVEYKIGLLVGEVLGEVIEATRKFVEKKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLMVPNTKHFHDITTIKDALALYGRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 555 MS LE RASHE+IE +E IV L+ +P T++ER+ Q +RV +I I + +Q L+ IY D K+E+A+L +G + F FY RL +EYH++HPN V EE EP + FSGEE GKYLD+ L+ E+ + +Y +YL+ F+ + VP K + Y+++L DYL F QR +PL +++ + FE LW G++ GW E G ++ VDL + E++ +G E+LKEGL ALGLK GGT+K+RA RLF TK +DKK +A +Q A +E K+ + E+L E I T++ VEKKQ XXXXXXXXXXXXXXXXXXXX IYNPL LP+G+DGKPIPYWLYKLHGLG E+KCEICGNHSYWGRRAF+RHF+EWRH HGMRCL +PNTK+F++IT+I++A AL+GRI+E+ + ++EEE+ED EGN+ N++TF DL RQGL+ Sbjct: 1 MSSTLLEVTRASHEEIERFERLIVKDLQKEPSTSRERLSQNHRVRTMIDTITSTTQKLVEIYEDNDNARKDEIAALGGQTEKGTNVFNAFYDRLKEIREYHRRHPNARVIDASEEYEELLKEEPHIEFSGEEGHGKYLDMHELYNEYINSKFGKHIEYSVYLDVFSQPNHVPRNLKLTRTYREYLEHLLDYLIHFFQRIEPLQDLDRIFS---------------KVETEFEELWADGKI-EGWKNKVL------ENGHIPSNDS-VVDLDYYSTVEELMEVGPEKLKEGLAALGLKTGGTVKQRAERLFLTKHTPLAKLDKKHFA------------------KGSRDVGLNGASDASQQTDDVRQIALMETKLKRIC-ELLSETILQTKENVEKKQA------------LTYEEMXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKALWGRIQERQGVNKWRPDLEEEYEDKEGNIYNKKTFTDLQRQGLI 509
BLAST of NO10G00640 vs. NCBI_GenBank
Match: XP_012195042.1 (hypothetical protein SPRG_01439 [Saprolegnia parasitica CBS 223.65] >KDO34251.1 hypothetical protein SPRG_01439 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 359.8 bits (922), Expect = 1.600e-95 Identity = 222/581 (38.21%), Postives = 298/581 (51.29%), Query Frame = 0 Query: 1 MSGMTLERARASHEDIEAYEAAIVAILEDKPRTNKERIWQQNRVANLIGQIQARSQDLLNIYLDKHGVMKEEVASLRGRDAFPTFYSRLDAAKEYHQKHPNLPVKHHPAVQEEA-EPRLSFSGEEVWGKYLDLQALHMEFYSMP-------------------QTPKW-----DYQMYLEKFTDFSAVPSGKK--NAAWARYVKNLYDYLFSFIQRTQPLLNIEDVVGGEGXXXXXXXXXXXXXXXXXFEALWQAGELPSGWPKPSTAGEGGREEGXXXKEEARPVDLSKFRAAEDVEVLGMERLKEGLVALGLKCGGTLKERATRLFSTKGKRKEDIDKKLWAGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQCAWVEYKIGLLVGEVLGEVIEATRKFVEKKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLMVPNTKHFHDITTIKDALALYGRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 555 MS TLE RA HEDIE++E AIV+IL +KPR +K R+ ++V+ L+ + ARS+++L++Y DK G KEE+ +L GR F +FY +L +E+H+K+PN+ V H P+ + A +P + FSGEE +GKYLDL A H +F ++P +TP++ DY YL +F F +P K + + Y+ +L YL F +RTQPL++++DVV FE W A GW + + A D G + K+ +K LK+R G+ D +K A +E +I LVG +L EV+ AT F+E KQT P YNPLNLPLG+DGKPIPYWLYKLHGLGVE+ CEICGNHSYWGRR FDRHFQ+WRHAHGMRCL +PNTKHFHDIT++ DALALY ++KEQL+ E + EEE+EDSEGNVLN++T++DL+RQGLL Sbjct: 1 MSSSTLELLRAGHEDIESFERAIVSILNEKPRNHKARVLHGHKVSQLLDNVTARSREVLDLYDDKEGAFKEEIDTLHGRANFTSFYDQLKNIREFHRKYPNVEVSHEPSSLDAAMDPTVEFSGEERFGKYLDLHAFHTQFLNLPVFASVNKMKTADTSKVQRGRTPEYIDAPVDYISYLGRFAQFHKIPEAAKLSDTRYEAYLNDLLAYLKDFYRRTQPLVDLDDVVN---------------DAQTQFEKDW-ARHTVQGWATSVNT------------SSSTYCKACNKQFASDAVFNGHLKGKK-----HIKAAEQLKQR-----EATGEPAND--------------------------------------------SRKGLAHLEAQIKTLVG-LLAEVVHATISFLELKQT----RTPEELQAEILEEEDDALSDVEIDNDKVDDDDEQPFYNPLNLPLGWDGKPIPYWLYKLHGLGVEFTCEICGNHSYWGRRDFDRHFQQWRHAHGMRCLGIPNTKHFHDITSMADALALYEKLKEQLEKETWSKANEEEYEDSEGNVLNKKTYEDLSRQGLL 494
BLAST of NO10G00640 vs. NCBI_GenBank
Match: XP_008611950.1 (hypothetical protein SDRG_07871 [Saprolegnia diclina VS20] >EQC34544.1 hypothetical protein SDRG_07871 [Saprolegnia diclina VS20]) HSP 1 Score: 358.6 bits (919), Expect = 3.500e-95 Identity = 223/581 (38.38%), Postives = 297/581 (51.12%), Query Frame = 0 Query: 1 MSGMTLERARASHEDIEAYEAAIVAILEDKPRTNKERIWQQNRVANLIGQIQARSQDLLNIYLDKHGVMKEEVASLRGRDAFPTFYSRLDAAKEYHQKHPNLPVKHHPAVQEEA-EPRLSFSGEEVWGKYLDLQALHMEFYSMP-------------------QTPKW-----DYQMYLEKFTDFSAVPSGKK--NAAWARYVKNLYDYLFSFIQRTQPLLNIEDVVGGEGXXXXXXXXXXXXXXXXXFEALWQAGELPSGWPKPSTAGEGGREEGXXXKEEARPVDLSKFRAAEDVEVLGMERLKEGLVALGLKCGGTLKERATRLFSTKGKRKEDIDKKLWAGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQCAWVEYKIGLLVGEVLGEVIEATRKFVEKKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLMVPNTKHFHDITTIKDALALYGRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 555 MS TLE RA HEDIE++E AIV+IL +KPR +K R+ ++V+ L+ + ARS+++L++Y DK G KEE+ +L GR F +FY +L +E+H+K+P + V H P+ + A +P + FSGEE +GKYLDL A H +F ++P +TP++ DY YL +F F +P K + + Y+ +L YL F +RTQPL++++DVV FE W A GW A + A D G + K+ +K LK+R G+ D +K A +E +I LVG +L EV+ AT F+E KQT P YNPLNLPLG+DGKPIPYWLYKLHGLGVE+ CEICGNHSYWGRR FDRHFQ+WRHAHGMRCL +PNTKHFHDIT++ DALALY ++KEQL+ E + EEEFEDSEGNVLN++T++DL+RQGLL Sbjct: 1 MSSSTLELLRAGHEDIESFERAIVSILNEKPRNHKARVLHGHKVSQLLDNVTARSREVLDLYDDKEGAFKEEIDTLHGRANFTSFYDQLKNIREFHRKYPTVEVSHEPSSLDAAMDPTVEFSGEERFGKYLDLHAFHTQFLNLPVFASVNKMKTADTTKVQRGRTPEYIDAPVDYISYLGRFAQFHKIPEAAKLSDTRYEAYLNDLLAYLKDFYRRTQPLVDLDDVV---------------LDAQTQFEKDW-ARHTVQGWATSLNT------------SSATYCKACNKQFASDAVFNGHLKGKK-----HIKAAEQLKQR-----EATGEPASD--------------------------------------------SRKGLAHLEAQIRTLVG-LLTEVVHATISFLELKQT----RTPEELQAEILEEEDDALSDVEVDNDKVDDDDEQPFYNPLNLPLGWDGKPIPYWLYKLHGLGVEFTCEICGNHSYWGRRDFDRHFQQWRHAHGMRCLGIPNTKHFHDITSMADALALYEKLKEQLEKETWSKANEEEFEDSEGNVLNKKTYEDLSRQGLL 494
BLAST of NO10G00640 vs. NCBI_GenBank
Match: XP_011012040.1 (PREDICTED: splicing factor 3A subunit 3-like [Populus euphratica]) HSP 1 Score: 356.3 bits (913), Expect = 1.700e-94 Identity = 233/564 (41.31%), Postives = 324/564 (57.45%), Query Frame = 0 Query: 1 MSGMTLERARASHEDIEAYEAAIVAILEDKPRTNKERIWQQNRVANLIGQIQARSQDLLNIYLDKHGVMKEEVASLRGRDA-----FPTFYSRLDAAKEYHQKHPNLPV----KHHPAVQEEAEPRLSFSGEEVWGKYLDLQALHMEFYSMPQTPKWDYQMYLEKFTDFSAVPSGKK-NAAWARYVKNLYDYLFSFIQRTQPLLNIEDVVGGEGXXXXXXXXXXXXXXXXXFEALWQAGELPSGWPKPSTAGEGGREEGXXXKEEARPVDLSKFRAAEDVEVLGMERLKEGLVALGLKCGGTLKERATRLFSTKGKRKEDIDKKLWAGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQCAWVEYKIGLLVGEVLGEVIEATRKFVEKKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLMVPNTKHFHDITTIKDALALYGRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 555 MS LE RASHE++E E IV L+++P NK+R++Q +RV N+I I ++ L+ IY DK ++E+A+L G+ A F FY RL +EYH++HP V + + A+ +E EP + F+GEE +GKYLD+ L+ ++ ++ +Y YL+ F+ + VP K + + Y++NL +YL F QRT+PL +++ + FE W+ + GW K S RE G + +DL + E+++ +G E+LKE L ALGLK GGTL++RA RLF TK E +DKK + K+ A +E KI L ++L E I T++ V KKQ XXXXXXXXXXXXXXXXXXX IYNPL LP+G+DGKPIPYWLYKLHGLG E+KCEICGN+SYWGRRAF+RHF+EWRH HGMRCL +PNTK+F++IT+IK+A L+ RI+E+ + ++EEE+ED EGN+ NR+T+ DL RQGL+ Sbjct: 1 MSSTLLEMTRASHEEVERLERLIVKDLQNEPANNKDRLFQSHRVRNMIDNIITTTEKLVEIYEDKDNARRDEIAALGGQTAMGTNVFSAFYDRLKEIREYHRRHPAARVVDANEDYEAMLKE-EPVIEFTGEEAFGKYLDMHELYNQYNNLKFEKPIEYSTYLDIFSQPNIVPRKLKFSRQYREYMENLLEYLVYFFQRTEPLQDLDRIFS---------------KVTTEFEEQWE-NDAVQGWEKTS------RENGHLSADHT-VIDLDFYSTVEELKEVGPEKLKEALAALGLKSGGTLQQRAERLFLTKDTPLEKLDKKHFV------------------KGSRGSEPNGGAATSKEVDNSKEIALMEAKINKLC-DLLDETIVRTKENVVKKQA------------LTYDEMEXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAQELWKRIQERQGVNKWRPDLEEEYEDKEGNIYNRKTYTDLQRQGLI 509
BLAST of NO10G00640 vs. NCBI_GenBank
Match: XP_011012255.1 (PREDICTED: splicing factor 3A subunit 3-like [Populus euphratica]) HSP 1 Score: 356.3 bits (913), Expect = 1.700e-94 Identity = 233/564 (41.31%), Postives = 324/564 (57.45%), Query Frame = 0 Query: 1 MSGMTLERARASHEDIEAYEAAIVAILEDKPRTNKERIWQQNRVANLIGQIQARSQDLLNIYLDKHGVMKEEVASLRGRDA-----FPTFYSRLDAAKEYHQKHPNLPV----KHHPAVQEEAEPRLSFSGEEVWGKYLDLQALHMEFYSMPQTPKWDYQMYLEKFTDFSAVPSGKK-NAAWARYVKNLYDYLFSFIQRTQPLLNIEDVVGGEGXXXXXXXXXXXXXXXXXFEALWQAGELPSGWPKPSTAGEGGREEGXXXKEEARPVDLSKFRAAEDVEVLGMERLKEGLVALGLKCGGTLKERATRLFSTKGKRKEDIDKKLWAGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQCAWVEYKIGLLVGEVLGEVIEATRKFVEKKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLMVPNTKHFHDITTIKDALALYGRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 555 MS LE RASHE++E E IV L+++P NK+R++Q +RV N+I I ++ L+ IY DK ++E+A+L G+ A F FY RL +EYH++HP V + + A+ +E EP + F+GEE +GKYLD+ L+ ++ ++ +Y YL+ F+ + VP K + + Y++NL +YL F QRT+PL +++ + FE W+ + GW K S RE G + +DL + E+++ +G E+LKE L ALGLK GGTL++RA RLF TK E +DKK + K+ A +E KI L ++L E I T++ V KKQ XXXXXXXXXXXXXXXXXXX IYNPL LP+G+DGKPIPYWLYKLHGLG E+KCEICGN+SYWGRRAF+RHF+EWRH HGMRCL +PNTK+F++IT+IK+A L+ RI+E+ + ++EEE+ED EGN+ NR+T+ DL RQGL+ Sbjct: 1 MSSTLLEMTRASHEEVERLERLIVKDLQNEPANNKDRLFQSHRVRNMIDNIITTTEKLVEIYEDKDNARRDEIAALGGQTAMGTNVFSAFYDRLKEIREYHRRHPAARVVDANEDYEAMLKE-EPVIEFTGEEAFGKYLDMHELYNQYNNLKFEKPIEYSTYLDIFSQPNIVPRKLKFSRQYREYMENLLEYLVYFFQRTEPLQDLDRIFS---------------KVTTEFEEQWE-NDTVQGWEKTS------RENGHLSADHT-VIDLDFYSTVEELKEVGPEKLKEALAALGLKSGGTLQQRAERLFLTKDTPLEKLDKKHFV------------------KGSRGSEPNGGAATSKEVDNSKEIALMEAKINKLC-DLLDETIVRTKENVVKKQA------------LTYDEMEXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAQELWKRIQERQGVNKWRPDLEEEYEDKEGNIYNRKTYTDLQRQGLI 509
BLAST of NO10G00640 vs. NCBI_GenBank
Match: XP_022736047.1 (splicing factor SF3a60 homolog [Durio zibethinus]) HSP 1 Score: 356.3 bits (913), Expect = 1.700e-94 Identity = 237/564 (42.02%), Postives = 323/564 (57.27%), Query Frame = 0 Query: 1 MSGMTLERARASHEDIEAYEAAIVAILEDKPRTNKERIWQQNRVANLIGQIQARSQDLLNIYLDKHGVMKEEVASLRGRDA-----FPTFYSRLDAAKEYHQKHPNLPV----KHHPAVQEEAEPRLSFSGEEVWGKYLDLQALHMEFYSMPQTPKWDYQMYLEKFTDFSAVP-SGKKNAAWARYVKNLYDYLFSFIQRTQPLLNIEDVVGGEGXXXXXXXXXXXXXXXXXFEALWQAGELPSGWPKPSTAGEGGREEGXXXKEEARPVDLSKFRAAEDVEVLGMERLKEGLVALGLKCGGTLKERATRLFSTKGKRKEDIDKKLWAGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQCAWVEYKIGLLVGEVLGEVIEATRKFVEKKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLMVPNTKHFHDITTIKDALALYGRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 555 MS LE RA+HED+E E IV L+++P T K+R++Q +RV N I I A ++ L+ IY DK K+E+A+L G+ A F FY RL +EYH+KHP V + A+ +E EP + FSGEE G+YLDL L ++ + K +Y YL+ F+ +P K + Y++NL +YL F QRT+PL +++ + FE W G++ GW K G+E G ++A +DL + E++ +G E+LKE L ALGLK GGT+++RA RLF TK E +DKK +A K A +E K+ L ++L + IE T++ V KKQ XXXXXXXXXXXXXXXXXXXX IYNPL LP+G+DGKPIPYWLYKLHGLG E+KCEICGN+SYWGRRAF+RHF+EWRH HGMRCL +PNTK+F++IT I++A L+GRI+E+ + ++EEE+ED EGN+ N++T+ DL RQGL+ Sbjct: 1 MSSTLLEVTRAAHEDVERLERLIVKDLQNEPPTGKDRLYQSHRVRNNIDTIIATTEKLIEIYEDKDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPAARVVDANEEFEALLKE-EPVIEFSGEEALGRYLDLHELFNQYINSKFGAKIEYSAYLDVFSQPHNIPWKLKSTRQYREYMENLLEYLIYFFQRTEPLQDLDRIFS---------------KVEAEFEEQWADGQV-QGWEKQ------GQENGDDPAQDA-VIDLDYYSTVEELMEVGPEKLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDKKHFA------------------KGSRGPEQNGSTVVPQDINNLKDVASIEAKMKKLC-DLLSKTIEQTKENVVKKQA------------LTYEEMXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITNIEEAKELWGRIQERQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 509 The following BLAST results are available for this feature:
BLAST of NO10G00640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00640 ID=NO10G00640|Name=NO10G00640|organism=Nannochloropsis oceanica|type=gene|length=3070bpback to top protein sequence of NO10G00640.2 >NO10G00640.2-protein ID=NO10G00640.2-protein|Name=NO10G00640.2|organism=Nannochloropsis oceanica|type=polypeptide|length=487bpback to top protein sequence of NO10G00640.1 >NO10G00640.1-protein ID=NO10G00640.1-protein|Name=NO10G00640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=555bpback to top Synonyms
Publications
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