NO10G00630, NO10G00630 (gene) Nannochloropsis oceanica

Overview
NameNO10G00630
Unique NameNO10G00630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3748
Alignment locationchr10:210634..214381 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:210634..214381 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G00630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00630.1NO10G00630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00630.1NO10G00630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00630 ID=NO10G00630|Name=NO10G00630|organism=Nannochloropsis oceanica|type=gene|length=3748bp
ACAGGTTGAGAAGGGGGGAAAAGCTTCCGACGAGCGATATGAAACTCCTC
TCCCGGCTTTCGAAGTCAACCACGGAGCGCCTTCGCAGCAGAAGCAAGAG
CAAGGAGGGGGATGGCAGCGGGAGCGGGAGTGGCGTAAAGGAGGACATTT
TGCAAGgtatgtcgtgcatgcggagacatgaggcaggcacgaatgagtgt
gtacatttgtgcgagtatgtgtgcgtggagagggggaacgtgtgttgctg
ctgtatgcttttgggtagcaagctcacgacaggaaatgcgcggcatgtga
aggagggaaaagtttcagcctgctgcaacgacggtgcatcaagcacacag
tgccattaggcacaacgaatgaaattcagcactacctaaaggcgtgccgc
tgaaacatcaaccatccgacgtcacagacatacgagtcttcccctgcgtg
tgtcgccccacttccctccttccatcttctttcttctccgcgcaacgcct
ccggcccatcgtatgcatccctcctcatccaccttacccctaattctcta
cacagGCAATGCGACAGCCTCAAACGATGATATCGCCCCCAACTCCCCTC
CTCTCCTGCTACCAGGAGAGAGCGAGGGAGGGGGGCAGGACGAGCCACAG
GGCATCACCAAGCTGGAGCAGACCATGAGTGATTTACAAGTACAGGAAGG
GGAGGAGGGGGATGAGGGGATGCAGGAACAGGAAGGGCACAATTTCCCCC
TGGCTCCACCGAAGGGAGAAGGCGTGGAAGGGAGGGAGGATGGGAAGGAG
GACAGTCTCCTGAGGGGGATATCCGGGCTGGAGTTTGAGGGGAGCTTGAG
CTATCTGGCTGCTGTTGGAGGGGGGTCCTTGTCCTCTTCCTCGTCATCGA
TGTTGATGATGGGGAGGGAAGGGGCAGGGCTGGAGAGGCCTGTGAGCGGG
ACGGGATCGGATGTGTCGAGTTTGGTGTTCAAAAGCTCGGGGGGGGAGAG
TGTCTTCCATGTGGAGGGATTGATGGAGGGAGGGCGGGAGGGCGGGAAGG
AGGAGCCAGGGGAGGAAGACTTAGGGCCCGGACTTCCTCCTCTGTTTACG
AGCGATTCGTCGGTGAATGTTTATGTACCGACGAAGTTGCGGAGGGCGGG
TTCGCACACTGCGCCCGGGGGAACGTATGCCGAGGGGACGAATCGGGTTA
AGCAGGAGCAGGGGGGGAGTGGAGGGAGCGGAGGAGGAGCAGGAGACGGT
GGGGGAAGAAAGCAGACTTTGTTGAGAGAGATGGTGGAATTGAGTGGGGA
TAGTCCGGAGGCAGGGGGAGGGAGGGAAGGAGGGAGCAGGCCTATGAGCC
TGTCGACAACTGCAACGGGGGACGAACTCATTAATATGGACAATTTCAAC
AGCAACAATTCTAGCGTTTCCTCCGCGACCCTCTCTCAGCGAGTGCTTCC
GGTGACGGGGGGCTCAGGGGGGAGGGCGTTTGACAGCGTGGGCTCGGGGG
GGCCAGTCTTGGGCTTGTCCTCGATGGGGAGCGCCGGGACTGTGGGAGGA
GGGGGAGGAGGAGGGGGGATGATGGCTTACAGGACAGGATCCAGCTCCTC
CTCGCTCGGCATGGTAAGTCCACCGTCGAGTCTGGATGGGAGGTGCGTCG
ATGCGATCATGCAGCTCGGATCGAGTGGTGGGGATAGCTGCGACCCACAG
CTACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCA
GGTGGGAGGGGGCAAGAAGGAAGGGACTGAATTGCCACCTTTGTCGTCGC
TGACGGGGGGAGGGAGGGAAGGAGGAGGACAGGCCGAAGGAGCGGGAGGC
GTCCCCATCACGGTGGTGGAGGAGGTGAACGATCTGGACGTGAGTGTGGC
GCTTGGGGTCGTTTCCCCAGTTTTTGCCCCCTTGGTGGCCTCCTCCTCCT
CCTCCCTCCCTATTGTCCCATCAGTTGCTTCTTCTTCCACCTTGGGAAAA
GGAGACAGGAGGAGCATGTTACCGCCAGTGCGGAGTATGATGGAGGGAGG
GAGGGAGGAAGAGCCGATTGAGCTTCCGCGCCTATCGCAGAGAGAATTCT
GCAGTAAGAGCAATGAGTGGTTCGCGGGAGGGCTGGCCCCTGGGGAGGGA
GGGAAGGAGGGAGGGCGAGAAGGCGCACAGAGTTTTGTCAACGCTTTTAA
GGACGATTTGGGATCAAGTGGAGGGAGGGGGGAGGGAAGGAGGGAAGGAA
GTACGACGTCTGAACCACTAATAAGCACAGCGGATGAGGGGGTTGCTTCC
TCCCCTTCTTCCCTCAGCACCCCATCAGTCTCCTCCCAGGCTACTTCTCT
CCGCTCCCCTCCCCCTCCTCGTCCTCCCCATCGTTGGCAAGGTGGCGGAG
GGTGCGGAGGCGGCGGTGGAGGGGGGGCCGTGCTACCTCCCCGCGGCTAC
CATCAGCAGCTACAGCAGGGGCAGTTTGTAATGCCGGTGGCCCTCCCTCA
GGGCTTTGCTCCTCCTCCTCATTATGCGCCTGTCATGCCACCAGCTTCTT
TACCATATCTATACGAGAGAGGGAGGGAAGGTGGCTATGGAGGGGTTCGC
CAGATGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAACA
GCAGCAACAGCAACAGCAGCAACAGCAGCAACAGCAACAGCAGCCAGGGA
TGACGGACATAGTGATGGAGGGAGGAGGGCGAGGAGGAGGGATGGAGGGA
GGAAGGAGAGGAGGTGGAGAAGGAGGGGGCGAAGGAGGAAGAGGAGGGCG
GTATAATGCCCGGGCTCCCTACGGAGGGAGCAGTGTCCTGACCGTTGGTC
GTACTGAAGATGAATGGACGGAAGGGGAGGGGGCTAGGGAAGGGGGAGGA
GTCCCTGGCAGTGCTGATAAGAAGGGTGGACGTTACAAATGCCGTTTTTG
TGGCGAGATTAAACGGCAGCACATATGCCCGGCTCTAATCGACATCCCTA
GGGCGAGCAGTGGAACGCAGGTTGACTTGGCGTTGACGGGAGGGTTTGGA
GGGGTGCCTTTCATACCGCTTGAACTGCATGGATGTCACTTTTTAACGGT
CAAGGGGTGCGGGGGAGGGGGGGAGGGAGGGGTAGTGGGAGGGGAAGGAA
GTGGGGCGGAGGTGACGAGAGAGCTCCCGTTGATGCCGTTGCCTTGTAAT
ATGCAAACTCCTCAGCAGGGAGGGTTAGAGGAAGTGGGTTTTGAGGGACG
GGGGGAGAGTTTGACAATGCAAATTCCGGTTGTGCCGCCGCTGGGAGTGC
CCCCGATGATGCCGGGGTTTCAGTCGCAGCAGCTGCTGCAGCAGCAGCAG
TATGATCCGCAGCTGTATGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCC
ACCGTATGCTTATATACCTGTCGACCACCAGCAGCAAGAAGGGCAACACC
GATTGTAGAAAGGAATGAAAGAGTTAAGGGAAAAGAGGGGAAAACAGGGA
AAAGGAGAGGTCGAGTGTAAAATTGTGGACGTTCGTGGGACGCAGGGCAT
GTATCACGACTGAGTGGAGTGATGTAGGCGATGTGCGTGTCTGGGTGTGT
GTCTGAGAAAAAGAGGCCGGTCATCCTAGATGATTGCGGGTGATATAATT
TTTGGGAGCATGTAATAAAGTATGGCTCAAGGCAGCGTCAAAAGAGAGTG
AGTGATAAAAGAATGAACCAATTTGCTAAACATTGAAGAGGTGTGTGG
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protein sequence of NO10G00630.1

>NO10G00630.1-protein ID=NO10G00630.1-protein|Name=NO10G00630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1007bp
MKLLSRLSKSTTERLRSRSKSKEGDGSGSGSGVKEDILQGNATASNDDIA
PNSPPLLLPGESEGGGQDEPQGITKLEQTMSDLQVQEGEEGDEGMQEQEG
HNFPLAPPKGEGVEGREDGKEDSLLRGISGLEFEGSLSYLAAVGGGSLSS
SSSSMLMMGREGAGLERPVSGTGSDVSSLVFKSSGGESVFHVEGLMEGGR
EGGKEEPGEEDLGPGLPPLFTSDSSVNVYVPTKLRRAGSHTAPGGTYAEG
TNRVKQEQGGSGGSGGGAGDGGGRKQTLLREMVELSGDSPEAGGGREGGS
RPMSLSTTATGDELINMDNFNSNNSSVSSATLSQRVLPVTGGSGGRAFDS
VGSGGPVLGLSSMGSAGTVGGGGGGGGMMAYRTGSSSSSLGMVSPPSSLD
GRCVDAIMQLGSSGGDSCDPQLPQQQQQQQQQQQQQQQVGGGKKEGTELP
PLSSLTGGGREGGGQAEGAGGVPITVVEEVNDLDVSVALGVVSPVFAPLV
ASSSSSLPIVPSVASSSTLGKGDRRSMLPPVRSMMEGGREEEPIELPRLS
QREFCSKSNEWFAGGLAPGEGGKEGGREGAQSFVNAFKDDLGSSGGRGEG
RREGSTTSEPLISTADEGVASSPSSLSTPSVSSQATSLRSPPPPRPPHRW
QGGGGCGGGGGGGAVLPPRGYHQQLQQGQFVMPVALPQGFAPPPHYAPVM
PPASLPYLYERGREGGYGGVRQMQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQPGMTDIVMEGGGRGGGMEGGRRGGGEGGGEGGRGGRYNARAPYGGSSV
LTVGRTEDEWTEGEGAREGGGVPGSADKKGGRYKCRFCGEIKRQHICPAL
IDIPRASSGTQVDLALTGGFGGVPFIPLELHGCHFLTVKGCGGGGEGGVV
GGEGSGAEVTRELPLMPLPCNMQTPQQGGLEEVGFEGRGESLTMQIPVVP
PLGVPPMMPGFQSQQLLQQQQYDPQLYEQQQQQQQQQPPYAYIPVDHQQQ
EGQHRL*
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Synonyms
Publications