NO10G00590, NO10G00590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00590 vs. NCBI_GenBank
Match: XP_005855049.1 (signal peptidase I [Nannochloropsis gaditana CCMP526] >EKU21310.1 signal peptidase I [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 407.1 bits (1045), Expect = 4.000e-110 Identity = 200/259 (77.22%), Postives = 217/259 (83.78%), Query Frame = 0 Query: 2 RTSSPWVVLGHR-RSSSLSGLSSGNGRRPPLPPSYLAFHQLFSS-XXXXXXXXXXXXXXXXXGSLVDKVKAFFADAENRKDTTLFAVSFLVSLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPTRGYQEYVSQDPYITDKSKINEALIKRIIAKEGDVVEVKDGLLYINGAAQDEKYIAEGPAYVWGPSRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGKAICKYWPPWRLGLVEGP 259 R S +V +G SS++ LS+GNGRRPP PPS F LF+S GSL+DK K+FF+D ENRKDTTLF SFL+SLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPT+GYQEYVS+DPYITDKS+INEALIKRIIAK GDVVEVKDG L++NG AQ+EKYIAEGPAYVWGP RVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIG+AICKYWPPWRLGLVEGP Sbjct: 32 RGLSSYVAVGRLCPKSSITSLSNGNGRRPPFPPSRTIFPPLFASDSGNSGEGKEEEEGGAEEGSLLDKAKSFFSDPENRKDTTLFVTSFLISLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPTQGYQEYVSRDPYITDKSRINEALIKRIIAKGGDVVEVKDGQLFVNGVAQEEKYIAEGPAYVWGPRRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGRAICKYWPPWRLGLVEGP 290
BLAST of NO10G00590 vs. NCBI_GenBank
Match: EWM25296.1 (signal peptidase i [Nannochloropsis gaditana]) HSP 1 Score: 396.4 bits (1017), Expect = 7.100e-107 Identity = 195/254 (76.77%), Postives = 212/254 (83.46%), Query Frame = 0 Query: 2 RTSSPWVVLGHR-RSSSLSGLSSGNGRRPPLPPSYLAFHQLFSS-XXXXXXXXXXXXXXXXXGSLVDKVKAFFADAENRKDTTLFAVSFLVSLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPTRGYQEYVSQDPYITDKSKINEALIKRIIAKEGDVVEVKDGLLYINGAAQDEKYIAEGPAYVWGPSRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGKAICKYWPPWRLG 254 R S +V +G SS++ LS+GNGRRPP PPS F LF+S GSL+DK K+FF+D ENRKDTTLF SFL+SLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPT+GYQEYVS+DPYITDKS+INEALIKRIIAK GDVVEVKDG L++NG AQ+EKYIAEGPAYVWGP RVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIG+AICKYWPPWRLG Sbjct: 32 RGLSSYVAVGRLCPKSSITSLSNGNGRRPPFPPSRTIFPPLFASDSGNSGEGKEEEEGGAEEGSLLDKAKSFFSDPENRKDTTLFVTSFLISLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPTQGYQEYVSRDPYITDKSRINEALIKRIIAKGGDVVEVKDGQLFVNGVAQEEKYIAEGPAYVWGPRRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGRAICKYWPPWRLG 285
BLAST of NO10G00590 vs. NCBI_GenBank
Match: EJK52462.1 (hypothetical protein THAOC_28255 [Thalassiosira oceanica]) HSP 1 Score: 216.5 bits (550), Expect = 1.000e-52 Identity = 105/191 (54.97%), Postives = 130/191 (68.06%), Query Frame = 0 Query: 63 SLVDKVKAFFADAENRKDTTLFAVSFLVSLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPTRGYQEYVSQDPYITDKSKINEALIKRIIAKEGDVVEVKDGLLYINGAAQDEKYIAEGPAYVWGPSRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGKAICKYWPPWRLG 254 S ++V+ +FA E ++D + S ++L +R I+EPRYIPSLSMYPTF VGDQLAVEKVTK + R +VVVFNP ++E V K EALIKRI+A EGD VEV G L++NG QDE + AE Y +GP VP G +VLGDNRNHSLD HIWGFLP EN+IG+A+ YWPPWR+G Sbjct: 96 SFFEQVQEWFASEEGKEDVRTYTTSLGIALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRIRPLNRNEVVVFNPPTSFKEIVGD-----TSRKAKEALIKRIVATEGDKVEVMGGKLFVNGKEQDEPFTAEDAQYEFGPVLVPAGEVLVLGDNRNHSLDGHIWGFLPAENVIGRAVFVYWPPWRVG 281
BLAST of NO10G00590 vs. NCBI_GenBank
Match: OEU22583.1 (LexA/Signal peptidase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 215.3 bits (547), Expect = 2.300e-52 Identity = 102/191 (53.40%), Postives = 135/191 (70.68%), Query Frame = 0 Query: 63 SLVDKVKAFFADAENRKDTTLFAVSFLVSLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPTRGYQEYVSQDPYITDKSKINEALIKRIIAKEGDVVEVKDGLLYINGAAQDEKYIAEGPAYVWGPSRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGKAICKYWPPWRLG 254 S++++ + + AE + D + VS ++L +R I+EPRYIPSLSM+PTF VGDQLAVEKVTK + R +VVVFNP +++ + D Y ++ EALIKRI+A EGD VEVK G L++NG QDE + AE Y +GP +VP +VLGDNRNHSLD HIWGFLPK+N+IG+A+ YWPPWR+G Sbjct: 91 SIIEQFQRWLKSAEGQDDVKTYFVSLFIALALRFTIIEPRYIPSLSMFPTFDVGDQLAVEKVTKRISPFYRQEVVVFNPPESFRDIIVGD-YGQSTARAKEALIKRIVAIEGDEVEVKGGKLFVNGDEQDEPFTAEDAKYEFGPVKVPPENVLVLGDNRNHSLDGHIWGFLPKKNVIGRAVFIYWPPWRVG 280
BLAST of NO10G00590 vs. NCBI_GenBank
Match: CBN75099.1 (Signal peptidase I (SPase I) (Leader peptidase I) [Ectocarpus siliculosus]) HSP 1 Score: 210.3 bits (534), Expect = 7.300e-51 Identity = 99/184 (53.80%), Postives = 132/184 (71.74%), Query Frame = 0 Query: 74 DAENRKDTTLFAVSFLVSLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKV-TKTYKNYERGDVVVFNPTRGYQEYVSQDPYITDKSKINEALIKRIIAKEGDVVEVKDGLLYINGAAQDEKYIAEGPAYVWGPSRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGKAICKYWPPWRLGLVE 257 + + + D ++ S ++L +R+ +EPR+IPSLSM+PTF +GDQLAV+K+ +K + Y+R DVVVF P ++E+ +D+ K +ALIKR+IA GD V++KDG L++NG Q E Y E P Y WGP VP+GM MVLGDNRNHSLDSHIWGFLP EN+IG+AI KYWPPWR G +E Sbjct: 108 ERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREF-------SDRGK-KDALIKRVIAVGGDAVQIKDGSLFVNGQEQFEDYTFEEPEYSWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRAGTIE 283
BLAST of NO10G00590 vs. NCBI_GenBank
Match: XP_002289348.1 (thylakoidal processing peptidase, partial [Thalassiosira pseudonana CCMP1335] >EED92885.1 thylakoidal processing peptidase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 208.8 bits (530), Expect = 2.100e-50 Identity = 102/183 (55.74%), Postives = 126/183 (68.85%), Query Frame = 0 Query: 71 FFADAENRKDTTLFAVSFLVSLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPTRGYQEYVSQDPYITDKSKINEALIKRIIAKEGDVVEVKDGLLYINGAAQDEKYIAEGPAYVWGPSRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGKAICKYWPPWRLG 254 +FA E ++D + VS V+L +R I+EPRYIPSLSM+PTF VGDQLAVEKVTK + + R +VVVF+P ++E V K EALIKRI+A EGD VEV G L++NG Q+E + AE Y +GP VP G +VLGDNRNHSLD HIWGFLP EN+IG+A+ YWPPWR G Sbjct: 2 WFASDEGKEDVKTYTVSLGVALLLRLLIIEPRYIPSLSMFPTFEVGDQLAVEKVTKRIRPFSRNEVVVFHPPMKFREIVGD-----TSRKAKEALIKRIVATEGDKVEVMGGKLFVNGVEQEEPFTAEDAEYDFGPVVVPPGNVLVLGDNRNHSLDGHIWGFLPTENVIGRAVFVYWPPWRCG 179
BLAST of NO10G00590 vs. NCBI_GenBank
Match: XP_005535222.1 (similar to signal peptidase [Cyanidioschyzon merolae strain 10D] >BAM78936.1 similar to signal peptidase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 205.3 bits (521), Expect = 2.300e-49 Identity = 101/186 (54.30%), Postives = 131/186 (70.43%), Query Frame = 0 Query: 80 DTTLFAVSFLVSLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVT-KTYKNYERGDVVVFNPTRGYQEYVSQDPYITDKS--------KINEALIKRIIAKEGDVVEVKDGLLYINGAAQDEKYIAEGPAYVWGPSRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGKAICKYWPPWRLGLVE 257 D +F SFL ++ IRAF+VEPRYIPSLSMYPTF VGDQL V+KVT K ++ +RGDVVVF P E + + + +A+IKR++A GDVVE++DG LY+NG AQ E YIAE P Y WGP +VPDG +VLGDNR++SLDSH+WGFLP+ N+IG+A+ +YWP R+G +E Sbjct: 150 DVRVFTASFLAAVFIRAFVVEPRYIPSLSMYPTFDVGDQLLVDKVTLKLGRHIQRGDVVVFYPPPALIEASKETAKALNAAGETGAHQYGARDAMIKRVVALGGDVVEIRDGRLYVNGEAQIETYIAESPDYQWGPVQVPDGYLVVLGDNRSNSLDSHVWGFLPERNVIGRAVFRYWPLTRVGTIE 335
BLAST of NO10G00590 vs. NCBI_GenBank
Match: XP_002177521.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51984.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 205.3 bits (521), Expect = 2.300e-49 Identity = 100/175 (57.14%), Postives = 125/175 (71.43%), Query Frame = 0 Query: 79 KDTTLFAVSFLVSLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPTRGYQEYVSQDPYITDKSKINEALIKRIIAKEGDVVEVKDGLLYINGAAQDEKYIAEGPAYVWGPSRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGKAICKYWPPWRLG 254 +D + +S ++L +R I+EPR+IPSLSMYPTF VGDQLAVEKVTK K + R +VVVF P + +++ V DKSK EALIKRI+A EGD VE+K+G L IN Q+E Y AE Y +GP RVP +VLGDNRNHSLD HIWGFLP +N+IG+A+ YWPPWR+G Sbjct: 1 EDVKTYFISLFLALLLRFTIIEPRFIPSLSMYPTFEVGDQLAVEKVTKRIKPFYRTEVVVFQPPQAFRDIVENQ--YGDKSKGKEALIKRIVAVEGDKVEIKNGKLLINDIEQEEAYTAEDAQYAFGPVRVPPENVLVLGDNRNHSLDGHIWGFLPTKNVIGRAVFVYWPPWRVG 173
BLAST of NO10G00590 vs. NCBI_GenBank
Match: XP_005826622.1 (hypothetical protein GUITHDRAFT_154393 [Guillardia theta CCMP2712] >EKX39642.1 hypothetical protein GUITHDRAFT_154393 [Guillardia theta CCMP2712]) HSP 1 Score: 204.5 bits (519), Expect = 4.000e-49 Identity = 100/194 (51.55%), Postives = 133/194 (68.56%), Query Frame = 0 Query: 63 SLVDKVKAFFADAENRKDTTLFAVSFLVSLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPTRGYQEYVSQDPYITDKSKINEALIKRIIAKEGDVVEVKDGLLYINGAAQDEKYIAEGPAYVWGPSRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGKAICKYWPPWRLGLVE 257 S++D + +F E R++ + ++F++++ R F+VEPRYIPSLSM+PTF VGD LAVEK+T ++ Y+R DVVVF + +YV D+SK NE LIKRIIA EGD +++ G +YIN E +I P Y +GP VP G +VLGDNRN SLDSHIWGFLPKENIIG+A+ KYWP R+ LV+ Sbjct: 103 SVIDGLIKWFKSDEGREEALQWTITFVIAISFRVFVVEPRYIPSLSMFPTFHVGDMLAVEKITHYFRPYQRDDVVVFRAPPAFADYV-------DESKANEDLIKRIIAVEGDTIKITKGKVYINEQEVKEPFINGPPNYDFGPVTVPAGCVLVLGDNRNASLDSHIWGFLPKENIIGRAVFKYWPLNRVSLVQ 289
BLAST of NO10G00590 vs. NCBI_GenBank
Match: CEL93256.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 201.4 bits (511), Expect = 3.400e-48 Identity = 95/181 (52.49%), Postives = 128/181 (70.72%), Query Frame = 0 Query: 86 VSFLVSLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVTKTYKNYERGDVVVFNPTR------GYQEYVSQDPYITDKSKINEALIKRIIAKEGDVVEVKDGLLYINGAAQDEKYIAEGPAYVWGPSRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGKAICKYWPPWRLGLVEGPFQ 261 ++F +SL IR F+ EPR+IPSLSMYPT VGD + VEKV+K ++ RGDV+VF P + G ++ S + + K + A IKR +A GD VEVK+G L++NG Q+EK+I E P Y++GP +VPD M M+LGDNRN SLDSH+WGFLP +N+IG+A+ KYWPPWR G + PF+ Sbjct: 172 IAFFISLMIRIFVAEPRFIPSLSMYPTLDVGDNVVVEKVSKYWREPHRGDVLVFVPPQEALSLSGSKDDSSAFARLLNGGKSDRAFIKRCVAVGGDTVEVKNGRLFVNGDLQEEKFINEAPRYMFGPFKVPDSMVMMLGDNRNQSLDSHVWGFLPADNVIGRAVFKYWPPWRAGTI--PFE 350 The following BLAST results are available for this feature:
BLAST of NO10G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00590 ID=NO10G00590|Name=NO10G00590|organism=Nannochloropsis oceanica|type=gene|length=792bpback to top protein sequence of NO10G00590.1 >NO10G00590.1-protein ID=NO10G00590.1-protein|Name=NO10G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=264bpback to top Synonyms
Publications
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