NO10G00210, NO10G00210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO10G00210 vs. NCBI_GenBank
Match: XP_005853831.1 (hypothetical protein NGA_0429201 [Nannochloropsis gaditana CCMP526] >EKU22527.1 hypothetical protein NGA_0429201 [Nannochloropsis gaditana CCMP526] >EWM25246.1 hypothetical protein Naga_100571g2 [Nannochloropsis gaditana]) HSP 1 Score: 278.5 bits (711), Expect = 2.000e-71 Identity = 145/228 (63.60%), Postives = 175/228 (76.75%), Query Frame = 0 Query: 14 VLLVLLALSGTHAFFLPVPAVSSS-MTSTTRLHSGIKGVETFDGAFTLSPESESVLFDFLQCDDMKNEVCKQAKCSGARFTGQLFQPVPYSPGTPIGMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVFAIEGLDPEEKDKIMEKAKARMDLQALSAARLXXXXXXXXXXXXXXXXXXLPFLKGQPVEEDWSKVGASLKEL-MSEEEREAAEEAALDAMVV 240 +LLV LS ++AF +P+PA++S S++ L G++GVETFDGAFTLSPESE VL +++C+DMK EVCKQAKC+ ARFTGQLFQPVPYSPGTP+GMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVF IEGLDP+E+ KI+EKA+ARMDLQA +AA + LKG P EE+W+ VG +L E+ + E+ E +EAALDAMVV Sbjct: 13 LLLVATVLSVSNAFVVPMPAIASKPPASSSTLFGGLRGVETFDGAFTLSPESEGVLVGYMECEDMKKEVCKQAKCTSARFTGQLFQPVPYSPGTPLGMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVFTIEGLDPDEEKKILEKARARMDLQAQAAAH----QPMEEKDDGSEEKRPVTVLKGSPKEENWNGVGKALHEVALGEKAGEEEDEAALDAMVV 236
BLAST of NO10G00210 vs. NCBI_GenBank
Match: CBJ26188.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 123.6 bits (309), Expect = 8.100e-25 Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 0 Query: 44 LHSGIKGVETFDGAFTLSPESESVLFDFLQCDDMKNEVCKQAKCSGARFTGQLFQPVPYSPGTPIGMPREFED-FHLNPSYAICNVPPTVMFKAKIFKPPRLCAVFAIEGLDPEEKDKIMEK 165 L I+ VE+F+ F L ++ + L +L+ DM EVCKQ C A + G++FQPVPYS TP GMP++ E+ F LN Y I N+PP VMF AKIFKP RLCAV+ ++GL + K + E+ Sbjct: 59 LSMAIRAVESFNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKFFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNER 180
BLAST of NO10G00210 vs. NCBI_GenBank
Match: WP_017659898.1 (hypothetical protein [Geitlerinema sp. PCC 7105]) HSP 1 Score: 122.9 bits (307), Expect = 1.400e-24 Identity = 54/101 (53.47%), Postives = 71/101 (70.30%), Query Frame = 0 Query: 48 IKGVETFDGAFTLSPESESVLFDFLQCDDMKNEVCKQAKCSGARFTGQLFQPVPYSPGTPIGMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVF 149 +K V+ FD F+L P ++ LF L+ D ++C+Q C+GA FT QLFQP+PYS TP GMP+EFE +H + SY + NVPP MF+AKIFKP RLCAV+ Sbjct: 3 LKIVQNFDSRFSLEPNAKKTLFQLLKSDRFLEQICQQCCCNGAEFTEQLFQPIPYSIETPKGMPKEFEKYHESDSYLLVNVPPPFMFEAKIFKPSRLCAVY 103
BLAST of NO10G00210 vs. NCBI_GenBank
Match: WP_073071864.1 (hypothetical protein [Phormidesmis priestleyi] >PSB19435.1 hypothetical protein C7B65_10970 [Phormidesmis priestleyi ULC007]) HSP 1 Score: 120.6 bits (301), Expect = 6.900e-24 Identity = 54/102 (52.94%), Postives = 69/102 (67.65%), Query Frame = 0 Query: 47 GIKGVETFDGAFTLSPESESVLFDFLQCDDMKNEVCKQAKCSGARFTGQLFQPVPYSPGTPIGMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVF 149 GIK +E FD +F+L PE ++ LF+ L+ + +V + KC FT LFQPVPY+ TP GMP EFE FH + YAI NVPP MFKAK+FKP RLCA++ Sbjct: 2 GIKIIENFDSSFSLDPEVKTALFELLKSEAFLQQVAQALKCDQVEFTELLFQPVPYTTATPKGMPAEFEKFHNSADYAIVNVPPNFMFKAKVFKPSRLCAIY 103
BLAST of NO10G00210 vs. NCBI_GenBank
Match: WP_015214667.1 (hypothetical protein [Anabaena cylindrica] >AFZ58032.1 hypothetical protein Anacy_2590 [Anabaena cylindrica PCC 7122] >BAY05002.1 hypothetical protein NIES19_42710 [Anabaena cylindrica PCC 7122]) HSP 1 Score: 120.2 bits (300), Expect = 9.000e-24 Identity = 51/101 (50.50%), Postives = 68/101 (67.33%), Query Frame = 0 Query: 48 IKGVETFDGAFTLSPESESVLFDFLQCDDMKNEVCKQAKCSGARFTGQLFQPVPYSPGTPIGMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVF 149 +K V+ FD +FTL+PE++ LF L + +++C+ +C FT LFQPVPYSP TP GMP EFE +H + Y I NVPP MF AKIF+P RLCA++ Sbjct: 3 LKIVQNFDSSFTLAPEAQETLFKLLTSESFLSQICQNWQCEKIEFTEMLFQPVPYSPATPKGMPAEFEQYHKSEDYTIINVPPNFMFNAKIFRPSRLCAIY 103
BLAST of NO10G00210 vs. NCBI_GenBank
Match: PPT05944.1 (hypothetical protein CKA32_002447 [Geitlerinema sp. FC II]) HSP 1 Score: 120.2 bits (300), Expect = 9.000e-24 Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = 0 Query: 48 IKGVETFDGAFTLSPESESVLFDFLQCDDMKNEVCKQAKCSGARFTGQLFQPVPYSPGTPIGMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVF 149 +K V+ FD F+L P ++ LF L+ D ++C+Q C+G FT QLFQPVPYS TP GMP+EFE +H + SY + NVPP MF++KIFKP RLCAV+ Sbjct: 3 LKIVQNFDSRFSLEPNAKKTLFQLLKSDRFLAQICQQCGCNGVEFTEQLFQPVPYSIETPKGMPKEFEKYHESDSYLLVNVPPPFMFESKIFKPSRLCAVY 103
BLAST of NO10G00210 vs. NCBI_GenBank
Match: WP_006099972.1 (hypothetical protein [Coleofasciculus chthonoplastes] >EDX77015.1 hypothetical protein MC7420_2018 [Coleofasciculus chthonoplastes PCC 7420]) HSP 1 Score: 119.8 bits (299), Expect = 1.200e-23 Identity = 54/101 (53.47%), Postives = 67/101 (66.34%), Query Frame = 0 Query: 48 IKGVETFDGAFTLSPESESVLFDFLQCDDMKNEVCKQAKCSGARFTGQLFQPVPYSPGTPIGMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVF 149 +K V FDG+F L P++++ LF L + + +V Q C FT LFQPVPYS GTP GMPREFE +H + YAI NVPP MFKAKIF P RLCA++ Sbjct: 4 LKIVNNFDGSFVLEPDAQTHLFSLLNGESFRQQVAGQLHCQDLEFTELLFQPVPYSEGTPKGMPREFEQYHESDDYAIINVPPNFMFKAKIFNPSRLCAIY 104
BLAST of NO10G00210 vs. NCBI_GenBank
Match: WP_096558725.1 (hypothetical protein [Nostoc sp. NIES-4103] >BAZ53311.1 hypothetical protein NIES4103_59850 [Nostoc sp. NIES-4103]) HSP 1 Score: 119.8 bits (299), Expect = 1.200e-23 Identity = 54/101 (53.47%), Postives = 67/101 (66.34%), Query Frame = 0 Query: 48 IKGVETFDGAFTLSPESESVLFDFLQCDDMKNEVCKQAKCSGARFTGQLFQPVPYSPGTPIGMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVF 149 IK V++FD +FTL PE + LF L + N++C+Q +C FT LFQPVPYS TP GMP EFE +H + Y I NVPP MF AKIFKP RLCA++ Sbjct: 3 IKIVQSFDSSFTLEPELQETLFKLLTSESFVNQMCQQLQCEKVEFTKLLFQPVPYSLATPKGMPTEFEQYHESDDYIIINVPPNFMFSAKIFKPSRLCAIY 103
BLAST of NO10G00210 vs. NCBI_GenBank
Match: WP_015160325.1 (hypothetical protein [Chamaesiphon minutus] >AFY94184.1 hypothetical protein Cha6605_3170 [Chamaesiphon minutus PCC 6605]) HSP 1 Score: 119.4 bits (298), Expect = 1.500e-23 Identity = 54/101 (53.47%), Postives = 67/101 (66.34%), Query Frame = 0 Query: 48 IKGVETFDGAFTLSPESESVLFDFLQCDDMKNEVCKQAKCSGARFTGQLFQPVPYSPGTPIGMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVF 149 IK +E FDG+FTL ++ S+LF L + +V +QA C FT LFQPVPYS GTP GMP E E +H +P Y I NVPP MF AKIF+P RLCA++ Sbjct: 3 IKVIENFDGSFTLDQQARSILFGLLTSEKFLQQVAEQANCQSLTFTEILFQPVPYSAGTPKGMPAEIERYHQSPEYLIINVPPNFMFAAKIFQPSRLCAIY 103
BLAST of NO10G00210 vs. NCBI_GenBank
Match: WP_096830444.1 (hypothetical protein [Tychonema bourrellyi] >PHX54025.1 hypothetical protein CP500_018300 [Tychonema bourrellyi FEM_GT703]) HSP 1 Score: 119.4 bits (298), Expect = 1.500e-23 Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = 0 Query: 47 GIKGVETFDGAFTLSPESESVLFDFLQCDDMKNEVCKQAKCSGARFTGQLFQPVPYSPGTPIGMPREFEDFHLNPSYAICNVPPTVMFKAKIFKPPRLCAVFAI 151 G+K +E++DG+F + PE+++VL L + ++ Q KCS FT LFQPVPYS TP GMP EFE +H +AI NVPP MF+AK+FKP RLCA++ + Sbjct: 2 GLKIIESYDGSFVIEPEAKAVLLSLLTAESFLQQIASQLKCSRLEFTDLLFQPVPYSSETPKGMPAEFEKYHGKSDFAIVNVPPNFMFQAKVFKPSRLCAIYRV 105 The following BLAST results are available for this feature:
BLAST of NO10G00210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00210 ID=NO10G00210|Name=NO10G00210|organism=Nannochloropsis oceanica|type=gene|length=1495bpback to top protein sequence of NO10G00210.1 >NO10G00210.1-protein ID=NO10G00210.1-protein|Name=NO10G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=240bpback to top Synonyms
Publications
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