NO10G00160, NO10G00160 (gene) Nannochloropsis oceanica

Overview
NameNO10G00160
Unique NameNO10G00160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4486
Alignment locationchr10:49097..53582 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:49097..53582 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO10G00160 vs. NCBI_GenBank
Match: EWM25224.1 (hypothetical protein Naga_100089g2 [Nannochloropsis gaditana])

HSP 1 Score: 669.5 bits (1726), Expect = 7.100e-189
Identity = 314/408 (76.96%), Postives = 354/408 (86.76%), Query Frame = 0
Query:    5 MMKLLVLMLAGTASAMEGLARCDTSTNEREHIINSAVEKLEATGDFDVIEGTLTFNHRQIGNPAGRYGTVSFPTWSQPMALCKATTFNQTSPIPFSFCSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYASKGSKLSYRFPMDHIVPDVERCLNDPTYAPIFQPVPAWHFPGWPSCDWFSADALYTGLPNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAVAAFEGVRGEEG 413
            M   LVL+LA T   +EG+ RCDT+  ERE I+  A+  L  + DF VI+GTLTFNHRQIGNPAGRYGTVSFPTWSQP+ LCK+TTFNQTSPIPFSFC+IAFTLGPRDA+VWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPAN  TLNSTGG  DP+EKTTM+ STGDRETARHVK AF++AG P+G  NLDVIP+ LARFR+RQ    WV DKSDAFAWQFRVSQFE+ + AEAYF+QTWPVY +RARP YE++G +P+P P AR RGTGQDEAYLHPS+  LEE+II  YASKGSKLSYRFPMDHIVPD+ERCL DP YAPIF+PVPAWHFPGWPSCDWFSADALYTGLP+TTDLSALTFP  RT+VV+GVNQPRL+KSIY+NLM+TAVA FEG++  +G
Sbjct:    9 MAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEGMKACKG 416          
BLAST of NO10G00160 vs. NCBI_GenBank
Match: EWM25225.1 (hypothetical protein Naga_100089g2 [Nannochloropsis gaditana])

HSP 1 Score: 665.2 bits (1715), Expect = 1.300e-187
Identity = 312/401 (77.81%), Postives = 349/401 (87.03%), Query Frame = 0
Query:    5 MMKLLVLMLAGTASAMEGLARCDTSTNEREHIINSAVEKLEATGDFDVIEGTLTFNHRQIGNPAGRYGTVSFPTWSQPMALCKATTFNQTSPIPFSFCSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYASKGSKLSYRFPMDHIVPDVERCLNDPTYAPIFQPVPAWHFPGWPSCDWFSADALYTGLPNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAVAAFE 406
            M   LVL+LA T   +EG+ RCDT+  ERE I+  A+  L  + DF VI+GTLTFNHRQIGNPAGRYGTVSFPTWSQP+ LCK+TTFNQTSPIPFSFC+IAFTLGPRDA+VWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPAN  TLNSTGG  DP+EKTTM+ STGDRETARHVK AF++AG P+G  NLDVIP+ LARFR+RQ    WV DKSDAFAWQFRVSQFE+ + AEAYF+QTWPVY +RARP YE++G +P+P P AR RGTGQDEAYLHPS+  LEE+II  YASKGSKLSYRFPMDHIVPD+ERCL DP YAPIF+PVPAWHFPGWPSCDWFSADALYTGLP+TTDLSALTFP  RT+VV+GVNQPRL+KSIY+NLM+TAVA FE
Sbjct:    9 MAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFE 409          
BLAST of NO10G00160 vs. NCBI_GenBank
Match: EWM25226.1 (hypothetical protein Naga_100089g2 [Nannochloropsis gaditana])

HSP 1 Score: 665.2 bits (1715), Expect = 1.300e-187
Identity = 312/401 (77.81%), Postives = 349/401 (87.03%), Query Frame = 0
Query:    5 MMKLLVLMLAGTASAMEGLARCDTSTNEREHIINSAVEKLEATGDFDVIEGTLTFNHRQIGNPAGRYGTVSFPTWSQPMALCKATTFNQTSPIPFSFCSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYASKGSKLSYRFPMDHIVPDVERCLNDPTYAPIFQPVPAWHFPGWPSCDWFSADALYTGLPNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAVAAFE 406
            M   LVL+LA T   +EG+ RCDT+  ERE I+  A+  L  + DF VI+GTLTFNHRQIGNPAGRYGTVSFPTWSQP+ LCK+TTFNQTSPIPFSFC+IAFTLGPRDA+VWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPAN  TLNSTGG  DP+EKTTM+ STGDRETARHVK AF++AG P+G  NLDVIP+ LARFR+RQ    WV DKSDAFAWQFRVSQFE+ + AEAYF+QTWPVY +RARP YE++G +P+P P AR RGTGQDEAYLHPS+  LEE+II  YASKGSKLSYRFPMDHIVPD+ERCL DP YAPIF+PVPAWHFPGWPSCDWFSADALYTGLP+TTDLSALTFP  RT+VV+GVNQPRL+KSIY+NLM+TAVA FE
Sbjct:    9 MAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFE 409          
BLAST of NO10G00160 vs. NCBI_GenBank
Match: EWM29110.1 (hypothetical protein Naga_100007g53 [Nannochloropsis gaditana])

HSP 1 Score: 302.0 bits (772), Expect = 3.000e-78
Identity = 161/398 (40.45%), Postives = 232/398 (58.29%), Query Frame = 0
Query:   17 ASAMEGLARCDTSTNEREHIINSAVEKLEATGDFDVIEGTLTFNHRQIGNPAGRYGTVSFPTWSQPMALCKATTFNQTSPIPFSFCSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRF-----SPSVWFPAAELGDPANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKG------PRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTY-ASKGSKLSYRFPMDHIVPDVERCLNDPTYAPIFQPVPAWHFPGW-PSCDWFSADALYTGLPNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAV 402
            AS  +G+  CDT+  +R  ++  A+  L     +++ EG L+F+    GNPAG+YG V F     P AL +A       P+P     ++F +GP+DAV W GCTPPP  YFSIRSY+A+RF     + S + P AELGDP N   + +TGG  DP+ KTT+ VSTGD+     V+ AF++AGLP    NLDV+PS L RFRD      W  D+SD  AWQFRV++F N  +  AY ++ WPV+L+RA+P    +G        PL  P  +TRGTG+ E +L  +++ L E + +     +G  L++ FP+   +PD  RC++D  Y P+  P+P W+     P+CDWF+ D+LY+  P  +D      P  R  +V+GVN   L K+ +TN +VT +
Sbjct:   42 ASEEDGIV-CDTTGAKRHKVLAQALGTL--FDQYEIHEGNLSFH--MGGNPAGKYGVVKFDEALIPKALKRAAKATAGFPVPI---EVSFLMGPQDAVFWYGCTPPPTRYFSIRSYLAYRFPGEGRNISGYMPGAELGDPVNNAVIRTTGGPTDPFGKTTLFVSTGDKVAFHRVREAFAQAGLPGEAANLDVLPSELVRFRDTT--LPWAVDRSDTIAWQFRVNEFINPAEGSAYLDKVWPVFLLRAKPSEGGRGDGGVAPAMPLTAPPLKTRGTGESEEWLRSALEKLVEAVKTRMEVDRGLVLTHSFPLAPCMPDAIRCISDLDYCPVAMPIPQWNLTACNPTCDWFTRDSLYSTPPADSDFINFMIPRDRVLIVVGVNHVLLGKAAFTNFLVTGI 429          
BLAST of NO10G00160 vs. NCBI_GenBank
Match: EWM20787.1 (hypothetical protein Naga_100423g2 [Nannochloropsis gaditana])

HSP 1 Score: 276.9 bits (707), Expect = 1.000e-70
Identity = 177/462 (38.31%), Postives = 239/462 (51.73%), Query Frame = 0
Query:    8 LLVLMLAGTASAMEGLARCDTSTNEREHIINSAVEKLEATGDFDVIEGTLTFNHRQIGNPAGRYGTVSFP-TWSQPMALCKATTFNQTSPIPFSFCSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANLYTLNSTG--------------GALD----PYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRY------------------------------------------EQKGPR-PLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYA-SKGSKLSYRFPMDHIVPDVERCLNDPTYAPIFQPVPAWHFPGWPSCDWFSADALYTGL-PNTT---DLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAVA 403
            LL+ +++G  +      +CDT+  ER  ++   +E LE   +++ + G+L+F       PAGRYG V+F      P ALC+ T+   T P     C+ +F LGPRDAVV L CTPPP  YFS+RSY  FRF P  W PA EL DP N  T N+TG              G+ +    P+ +T   VSTGD  TAR V+ A + AG      NLDV+ +  A FRD +  P W  D+SDAF   +RVSQ  +      YF  ++P Y++R RP                                            ++  PR PL  P  R RGTGQDE+YL P++  LEE + +    S+G+ L  R+ M+HI+PD +RCL +P Y PI   VP W+  G+ +C +FS D LYT L P TT   D   LTFP  R++V LG NQ  LEK  Y+N+ +TA A
Sbjct:   12 LLLNVISGFQAYARQTTKCDTTEAERAEVMRRTLESLE--NEYEFLPGSLSF--PPFAQPAGRYGLVAFDGKVVNPPALCEITSRVDT-PYGPGLCNYSFVLGPRDAVVGLFCTPPPVKYFSLRSYTGFRFRPQAWLPAVELADPDNNLTFNTTGRLPREGPYLQGKREGSAESDAAPFCRTAAFVSTGDGVTARDVRRALANAGWAATATNLDVVSAEKAYFRDVR-RP-WAIDRSDAFVINYRVSQPIDSAAVAPYFASSYPFYMLRHRPEVSSATSNRELGNASGAPAQATLPTSGYLNMAPGGNLGHLPDIEDENAPREPLTTPPLRPRGTGQDESYLLPTLARLEEAVTAYMGRSRGAVLHARWEMEHILPDTQRCLTEPDYFPIAASVPEWNLTGFATCGFFSRDCLYTFLSPPTTGKVDYGDLTFPRNRSFVFLGANQVGLEKVTYSNIFMTATA 466          
BLAST of NO10G00160 vs. NCBI_GenBank
Match: XP_005854962.1 (hypothetical protein NGA_0379900 [Nannochloropsis gaditana CCMP526] >EKU21402.1 hypothetical protein NGA_0379900 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 242.7 bits (618), Expect = 2.100e-60
Identity = 148/367 (40.33%), Postives = 191/367 (52.04%), Query Frame = 0
Query:  102 CSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANLYTLNSTG--------------GALD----PYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRY------------------------------------------EQKGPR-PLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYA-SKGSKLSYRFPMDHIVPDVERCLNDPTYAPIFQPVPAWHFPGWPSCDWFSADALYTGL-PNTT---DLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAVA 403
            C+ +F LGPRDAVV L CTPPP  YFS+RSY  FRF P  W PA EL DP N  T N+TG              G+ +    P+ +T   VSTGD  TAR V+ A + AG      NLDV+ +  A FRD +  P W  D+SDAF   +RVSQ  +      YF  ++P Y++R RP                                            ++  PR PL  P  R RGTGQDE+YL P++  LEE + +    S+G+ L  R+ M+HI+PD +RCL +P Y PI   VP W+  G+ +C +FS D LYT L P TT   D   LTFP  R++V LG NQ  LEK  Y+N+ +TA A
Sbjct:   22 CNYSFVLGPRDAVVGLFCTPPPVKYFSLRSYTGFRFRPQAWLPAVELADPDNNLTFNTTGRLPREGPYLQGKREGSAESDAAPFCRTAAFVSTGDGVTARDVRRALANAGWAATATNLDVVSAEKAYFRDVR-RP-WAIDRSDAFVINYRVSQPIDSAAVAPYFASSYPFYMLRHRPEVSSATSNRELGNASSAPAQATLPTSGYLNMAPGGNLGHLPDIEDENAPREPLTTPHLRPRGTGQDESYLLPTLARLEEAVTAYMGRSRGAVLHARWEMEHILPDTQRCLTEPDYFPIAASVPEWNLTGFATCGFFSRDCLYTFLSPPTTGKVDYGDLTFPRNRSFVFLGANQVGLEKVTYSNIFMTATA 386          
BLAST of NO10G00160 vs. NCBI_GenBank
Match: EWM26101.1 (hypothetical protein Naga_100014g81 [Nannochloropsis gaditana])

HSP 1 Score: 109.4 bits (272), Expect = 2.800e-20
Identity = 110/427 (25.76%), Postives = 180/427 (42.15%), Query Frame = 0
Query:   25 RCDTSTNEREHIINSAVEKLEATGDFDVIEGTLTFNHR-----QI-GNPAGRYGTVSF---------PTWSQPMALCKATTFNQTSPI--PFSFCSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRF------------SPSVWFPAAELGDPANLYTLNSTGGA------LDP---YEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRA--RPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYASKGSKLSYRFPMDHIVPD----VERCLNDPTYAPIFQPVPAWHFPGWPSCDWFSADALYTGLPNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTAVAAFEGV 408
            +CD     R  I   A+E L+   DF V++  +   HR     Q+ GNP   Y   +F         P +         ++ N  SP   P S   +  ++   +A+V L CTPPPA YF + SYV  R             S  V  P AE+ +P N   +N+T G       +DP   +   ++ V +  RE  + +  AF +AGL +   N   + +   R  DR     W  +  D  +   RVS FE+K  A+A+ +  WP + ++A   P Y+    R +P     +  +G+ E    P++  L   II+   + G     R      VP+      +CLN+ ++     P+          C + + D  Y     T+      F L + ++V+GV   RL  S Y+++M+T+   +E +
Sbjct:   41 QCDVDRESRATIALKALEILK-MNDFTVVKPGIFAGHRPSNGEQVGGNPNTLYMLAAFNDTDRLLTPPDYPPAEWPFDPSSDNGPSPPPGPVSDQLMGVSIQRGEAIVLLFCTPPPAKYFGLTSYVTNRVLFNDTGGGRGDASLVVHMPLAEISNPLNYLVMNTTKGTATAARKVDPSSFFNSLSLAVFSPSREVYQTITEAFVQAGLAERASNFYPLSAQTIRLHDRSKPFEW--NYPDRLSVLCRVSYFEDKAAADAWASHPWPAFFIKAPDLPHYQ----RSVPEQRLLSDISGESEQTYLPTIHSLLAAIIANKTASGHARLLRQEQIVAVPNDRGTRNQCLNNNSFIAAVDPLMM-----AGGCGFGTTDCRY----GTSAALDQPFGLDKFFIVVGVQHERLGHSSYSSIMLTSQLGYEEI 451          
BLAST of NO10G00160 vs. NCBI_GenBank
Match: KOO34667.1 (hypothetical protein Ctob_009281 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 104.8 bits (260), Expect = 7.000e-19
Identity = 80/264 (30.30%), Postives = 124/264 (46.97%), Query Frame = 0
Query:  146 AELGDPANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPR--YEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYASKGSKL-----SYRFPMDHIVPDVERCLNDPTYAPIFQPVPAWHFPGWPSCDWFSADALYTGL--PNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTA 401
            +E GD  N   LN++  A  P+  T+ ++ + D  T +    A   AGL     N DVI ++L      + H   + D+ D      RV++  + +    Y N +WPV L+RAR    +EQ    PL     R   TG +E+ L P +  L E +++ Y ++   L       ++ +D  + D  RCL DP++ P   P+          C   + D LYTG+  P+T  L++      R  V+LGVN  R  KS Y NLM++A
Sbjct:   45 SEYGDTLNHVVLNTS--ARRPWNSTSAIIVSADVRTIQQTSAALVAAGLESSAHNFDVINASLLHL--ERPHVPGLVDRPDFLQTFVRVAEPASAEQLTEYLNVSWPVLLLRAREEAAFEQHAVPPL-----RNLKTGVNESALAPPLAQLREAVLAHYGARNRSLLSAEPVQQYHLDADLSDDLRCLVDPSFDPEPLPLDPNATTNRTGCGAATRDCLYTGVMAPSTLFLTS-----GRVLVLLGVNHRRTRKSAYGNLMLSA 294          
BLAST of NO10G00160 vs. NCBI_GenBank
Match: OGO58434.1 (hypothetical protein A2025_03095, partial [Chloroflexi bacterium RBG_19FT_COMBO_47_15])

HSP 1 Score: 102.8 bits (255), Expect = 2.700e-18
Identity = 84/309 (27.18%), Postives = 143/309 (46.28%), Query Frame = 0
Query:    6 MKLLVLMLAGTASAMEGLARCDTS----TNEREHIINSAVEKLEATGDFDVIEGTLTFNHRQIGNPAGRYGTVSFPTWSQPMALCKATTF-NQTSPIPFSFC---SIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAA---ELGDPANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIISTYA 304
            + LL++++  T      +  C  +    T+  +  I + ++ L+  G F V EG  ++        AG   T        P    K      QT+P  F+     + ++ L P +A++ +G TPP + YF+ +SY++FR++ +          LGD  N  T+N+ G   +P+++  + ++T D+     V+ A   AG P G+ N DVIPS++          + + +  D F +  RV+  ++KD  +AY N      L R  P+   K   P P P  R RGTG  E  L P+V  L   I++ Y+
Sbjct:    5 INLLLVLIVSTLLIFTTIVSCTVNEPSPTSATDGDIETLLDVLDKAG-FYVQEGEYSYTDAIALCNAGVIKTCQGNNVGAPYLAYKLPPAPEQTTPNMFADSRGWAYSYRLRPDEAILQIGRTPPESRYFAYQSYLSFRYNATTKHYIQMFDSLGDTVNPLTINTKGKEDNPFDQPVIFITTADKGIDTRVRTAVENAGYPSGIINTDVIPSSVVN--------MGLENDDDLFQFLSRVALPKDKDSLDAYINNPGSTVL-RLTPKTPPK-LDPFPTPELRVRGTGNTEMDLLPAVDDLRAAILAKYS 302          
BLAST of NO10G00160 vs. NCBI_GenBank
Match: WP_014587387.1 (hypothetical protein [Methanosaeta harundinacea] >AET65208.1 hypothetical protein Mhar_1851 [Methanosaeta harundinacea 6Ac])

HSP 1 Score: 97.8 bits (242), Expect = 8.500e-17
Identity = 89/311 (28.62%), Postives = 139/311 (44.69%), Query Frame = 0
Query:   13 LAGTASAMEGLARCDTSTNEREHIINSAVE--------KLEATGDFDVIEGTLTFNHRQIGNPAGRYGTVSFPTWSQPMALCKATTFNQTSPIPFS---FCSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSP---SVWFPAAELGDPANLYTLN-STGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDNLDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQTWPVYLVRARPRYEQKGPRPLPPPVARTRGTGQ-DEAYLHPSVQLLEEKIISTYASKGS 308
            L GT S  +G+AR D    +    I +  E        +L+    FD++   + F+    GN AG +    +  +  P A        Q +P PF      SI + LGP +A+V++G TPP   YFS +++  F + P           +GD  NL T N S      P+++  M+VST DR     VK A   AG    + N +++PS++ R        + +   SDAF +  R++ F+N+     Y  +T P  ++R  P  +   P P P P  R RG G   E  L P++  L   I+  Y  + +
Sbjct:   47 LNGT-SPEDGMARGDLGGGDILAFIEALEEDGFTVQLGELKTQNVFDLVNEGIVFSCN--GNNAGAF----YKAYVLPRAP------GQIAPNPFEDKMNLSIGYRLGPDEAIVYIGKTPPSCTYFSYQTFQYFHYYPIEGKFKKIFGNVGDTINLLTANISRESEGSPFDEAIMMVSTADRGVDERVKAAAISAGYDPEIFNTEILPSSILR--------MGLDAYSDAFIFLQRMTYFQNETSGADYLKET-PGVVLRITPN-QSVEPDPFPMPELRVRGNGDATELDLMPALFELRAAILEKYGEENA 334          
The following BLAST results are available for this feature:
BLAST of NO10G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25224.17.100e-18976.96hypothetical protein Naga_100089g2 [Nannochloropsi... [more]
EWM25225.11.300e-18777.81hypothetical protein Naga_100089g2 [Nannochloropsi... [more]
EWM25226.11.300e-18777.81hypothetical protein Naga_100089g2 [Nannochloropsi... [more]
EWM29110.13.000e-7840.45hypothetical protein Naga_100007g53 [Nannochlorops... [more]
EWM20787.11.000e-7038.31hypothetical protein Naga_100423g2 [Nannochloropsi... [more]
XP_005854962.12.100e-6040.33hypothetical protein NGA_0379900 [Nannochloropsis ... [more]
EWM26101.12.800e-2025.76hypothetical protein Naga_100014g81 [Nannochlorops... [more]
KOO34667.17.000e-1930.30hypothetical protein Ctob_009281 [Chrysochromulina... [more]
OGO58434.12.700e-1827.18hypothetical protein A2025_03095, partial [Chlorof... [more]
WP_014587387.18.500e-1728.62hypothetical protein [Methanosaeta harundinacea] >... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL055nonsL055Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR091ncniR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007675NSK007675Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00160.1NO10G00160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO10G00160.2NO10G00160.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|612928gene_10808Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100089g2gene5265Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00160.1NO10G00160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO10G00160.2NO10G00160.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00160 ID=NO10G00160|Name=NO10G00160|organism=Nannochloropsis oceanica|type=gene|length=4486bp
ACAGCTACGAGCAGAGACTGCAGAGGAAAGGTCAGCACTGTCGGGGACGA
GACGGCGTGGTTGTAGTATTTGTACCGCTATTCTACCCCAAACAACAAGT
TCCCGATGATCCCAATGATGATGAAGCTCCTTGTCCTAATGCTGGCGGGT
ACAGCCAGCGCGATGGAGGGCTTGGCACGCTGTGACACGTCCACCAACGA
GCGCGAGCACATCATCAATAGCGCCGTGGAAAAGCTGGAAGCCACGGGGG
ACTTTGATGTGATCGAGgtgagaagggagggatggagagaggggggagag
acatacaacataggagagtgatggtcgtctgtgtttttttttgtggtccc
tgagtccctacggcgtcgcgctgcatacggcactctctggaagcctgggc
tactttgtcaagtaaagcgtcggtagggaaagagaaggatcgagagagtt
ggctagggctgtggttgtctgaatcagaagacatgttacctcccttcttc
tagaatacgtcccagaggcacaagggaatgcatgaagaccgccaagcagc
gtctcaaccatagcttatgtcagcaattttcttgatatgttcaatccaag
ctaataacgccggtagtgtgatgtatcctggtcccctcaagccaaatcaa
atcgaattcccgttcccacctgcactgcgctaagtgtcccttcctccctc
cctccctccctccctccctcccttcctccttctttttctgccacacagGG
CACCCTCACCTTCAATCACCGCCAGATTGGCAACCCCGCCGGTCGGTACG
GCACGGTCTCTTTTCCCACCTGGTCCCAGCCGATGgtcagtatccatccc
gcacgtgtggagggagggagtgagggaggaaaggagaaaattggcgattt
tttagatgcacctatgtgcattgattgactgacaccttcctttttccctc
cttgccccgcccctcctactccctcgacgaaacccagGCGCTGTGTAAAG
CGACGACGTTCAACCAAACGTCCCCGATCCCTTTTTCCTTCTGCTCGATC
GCCTTCACCCTCGGTCCGCGCGATGCGGTCGTATGGCTCGGCTGCACCCC
TCCCCCGGCCGCCTACTTCTCCgtaagtgatccacgcctcttctcttgtc
cctgcttgcctctctccctccatctcttcccatttcgttctccctcgagc
gtttcacgtgtgacccctcatctcccgcacttccccttcacacaccccat
ctccctccctccctccctccctccctcccttcctccctccctccctccct
cccccttttccctccctccctttcttctcctctccctctctcagATCCGC
TCGTACGTGGCCTTCCGCTTCTCTCCTTCGGTCTGGTTCCCTGCCGCGGA
GCTGGGCGACCCCGCCAACCTATACACCCTCAACAGCACGGgtgagaggg
agggaaggaaggaatgcgggcgtgagagaggggaatgcagctgaggtaaa
actcacgattgaaatccaacgtttgcagGCGGGGCATTGGACCCCTACGA
GAAGACGACTATGCTCGTCTCGACGGGCGACCGGGAGACGGCGCGTCACG
TCAAGgtacgcaggcccctcctttcctccctcctttcctccctccttttc
ttctttcttctcccccccccccccaccggcccgcgctgttgcttcttgtt
tattatattcttcacagacatctacccctgctctctctatattcatccct
cctgtcctctcaccctcttcaaacctaatctaatctaattaatctgctga
tacccctatcatgcctaaacccactctaatttaattaacctgattaccct
tagAACGCCTTCTCCGAGGCCGGCCTCCCCAAGGGCGTGGACAACCTGGA
CGTCATCCCCTCCACCCTCGCCCGCTTCCGgtacgtcccctccctccttc
cctcccccctcccctccctccttccatccctcccctccttccctcttacc
tctggatacatctccctctccgctcttccctccctccctccctctctcca
cgtttgttgaggttggttctagttattttgttcgtcctccctcccccttc
ggagtaatatctaatcctccttcccccctccctccctccctccctccgtc
tccagTGACCGGCAGGGTCACCCCCTGTGGGTGACGGACAAGAGCGACGC
CTTCGCGTGGCAGTTCCGAGTCTCGCAATTCGAGAACAAGGACGATGCCG
AGgtacggtgtttcgtgtccgcccgccctccctccctccctccctccctc
cctctgtgccggcggcagtcgccggtcgacccatttggaattaaccaacc
ctcaccttctccccttccttcccttccccccttccccccttccccttccc
ccctaagGCCTACTTCAACCAGACCTGGCCGGTCTATCTGGTGCGCGCTC
GTCCGCGTTACGAGCAGAAGGGCCCGAGGCCCCTGCCACCCCCAGTGGCG
CGCACCCGAGgtaaggaagatgcacggaggaaggagggagggaaaggagg
agcaagaaccttattaaaccctcagaatcaattatgaacaactcgttccc
tcccaccctccttccctcccgccccccttccacagGCACGGGTCAAGACG
AGGCCTACCTGCATCCGTCCGTCCAGTTGCTGGAAGAGAAGATCATCAGT
ACGTACGCCAGCAAGGGGAGCAAGCTCTCCTACCGCTTTCCCATGGACCA
TATTGTCCCTGACGTGGAGAGGTGTCTCAACGACCCAACCTACGCACCGA
TCTTCCAGCCGGTGCCTGCCTGGCATTTCCCGGGGTGGCCCAGgtaggtg
ggatgggagggagggagggagggagggagggagggagggagggagggagg
gaggggggtaaggggggagcagtttcctttctttccaccgaccagcctat
ttctttttcctactaaacgctcaacgccaccctccttcctcctgcatagC
TGCGACTGGTTCTCCGCCGACGCCTTGTACACGGGCCTGCCCAACACCAC
CGACCTCTCTGCCCTTACCTTCCCCCTCACGAGGACCTACGTAGTGCTGG
GCGTCAACCAGCCCCGGCTGGAGAAATCAATTTATACCAATCTGATGGTC
ACGGCGGTGGCGGCATTTGAAGGTGTGCGGGGGGAGGAAGGATGGGAAGG
AGTGGGAAGGATGACAGGCAGGGACGATCATGTTAATGCTTGAGGTTGCT
TGAGGGTTTGTGGTCATATCTTATCTCTCTCCTTTTCATTCTTTCCCTGT
CTCCTTCCCCCCCTCCTAGATCCGCTGCACAGTGTGAACCTGACCGCCAC
GGAGCTCCAAGGCTCGGCCGGCGTGTTCGCTCCAGATgtaggtggagacc
acgaggggagagaaggagggagggctgctgaaggatcacttagtggctag
caactgctgcttcttgagaaaagattcgaatgcctacatgtctcaccctt
cctccctcccttccttccttcagATTGACTATCCTGACGACCTCTGGGCC
TACTCCTTCTCCCGTGACTGCTCTTCTGGCGAGCTGGGACAAGGCGGACC
TTTATTCTGCCGGACCGTCACTCCCAGCATGATCAACGAGACAGAGTTTT
TGTTTGTGGTGGAGAGGAAATACCTGGAGTTGGCCACCAAGACGGGCCCG
TCCCCGCAGGAGGTGATGCCTCCCACGGTGCTAATATTCGATAAGGTGGA
GACGGACGAAGACGAGGACGAGAAAGAGCACGAGGAGTTGCTGTGGCAGG
ACGAGGCGGTGAGTCGCCCGGCGTTGCGGCGGAGTATGTAAGCCAGAGAG
ATTGAAATTTAAGGGAGAGAAATGAATAAGTGTAGCGACCAACGCTGAAT
TTTCCTGACCTCTATGTCTCTTTACTTTTTTGACATGGGTCGAAACGCTG
AAGCACTCTTGGTTCTAAAAAGGTATATATAAGTTGTAGAGTGACTACTC
TTCTCGTGTAAAGCAGAGAAGCAGAGGAATAGGTGACGGGTAACATGCAA
ATAAACTCACAAAAAACAACTTTTAAATACAAATTGTGTCGTGTCCTATC
CACATTTCCCCTTCTTCCATTCCCACACCGTGTCGTAATTTCGTGCGGAG
GTATGGCGTGGCTTCTTACGCCCTGCCTTGTCTCGTTGATGCGCTTCGAC
CAAGCATAATAATGTGTCACTGTAAGCCTCTCGTGCAAAGCAGGCATTCT
GTGAATGATGTCTTGTCCTCCTGCTGGTTTCCAGGACGAACGAACGAGCG
TACCAGGGGTATTGTGAGCGCAAACAGCATTATGTGCAGCCAGCAAAATT
CCCGTCTCAGCCTCTTCCCTGACGTCTTTATCTCGCAACATACACAAGTG
AGAATCATGCGAATGATCGAGAAGCCACATTGGAAATTTAAAGTCATCAA
GAGCATTGAAAACCACGCAGGACATGCGAATACCAC
back to top

protein sequence of NO10G00160.1

>NO10G00160.1-protein ID=NO10G00160.1-protein|Name=NO10G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=534bp
MIPMMMKLLVLMLAGTASAMEGLARCDTSTNEREHIINSAVEKLEATGDF
DVIEGTLTFNHRQIGNPAGRYGTVSFPTWSQPMALCKATTFNQTSPIPFS
FCSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGD
PANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDN
LDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQT
WPVYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIIS
TYASKGSKLSYRFPMDHIVPDVERCLNDPTYAPIFQPVPAWHFPGWPSCD
WFSADALYTGLPNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTA
VAAFEDPLHSVNLTATELQGSAGVFAPDIDYPDDLWAYSFSRDCSSGELG
QGGPLFCRTVTPSMINETEFLFVVERKYLELATKTGPSPQEVMPPTVLIF
DKVETDEDEDEKEHEELLWQDEAVSRPALRRSM*
back to top

protein sequence of NO10G00160.2

>NO10G00160.2-protein ID=NO10G00160.2-protein|Name=NO10G00160.2|organism=Nannochloropsis oceanica|type=polypeptide|length=429bp
MIPMMMKLLVLMLAGTASAMEGLARCDTSTNEREHIINSAVEKLEATGDF
DVIEGTLTFNHRQIGNPAGRYGTVSFPTWSQPMALCKATTFNQTSPIPFS
FCSIAFTLGPRDAVVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGD
PANLYTLNSTGGALDPYEKTTMLVSTGDRETARHVKNAFSEAGLPKGVDN
LDVIPSTLARFRDRQGHPLWVTDKSDAFAWQFRVSQFENKDDAEAYFNQT
WPVYLVRARPRYEQKGPRPLPPPVARTRGTGQDEAYLHPSVQLLEEKIIS
TYASKGSKLSYRFPMDHIVPDVERCLNDPTYAPIFQPVPAWHFPGWPSCD
WFSADALYTGLPNTTDLSALTFPLTRTYVVLGVNQPRLEKSIYTNLMVTA
VAAFEGVRGEEGWEGVGRMTGRDDHVNA*
back to top
Synonyms
Publications