NO10G00110, NO10G00110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00110 vs. NCBI_GenBank
Match: WP_074315501.1 (4a-hydroxytetrahydrobiopterin dehydratase [Singulisphaera sp. GP187] >SIO60002.1 4a-hydroxytetrahydrobiopterin dehydratase [Singulisphaera sp. GP187]) HSP 1 Score: 119.8 bits (299), Expect = 8.100e-24 Identity = 55/111 (49.55%), Postives = 72/111 (64.86%), Query Frame = 0 Query: 34 TCSRDAHKHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVP 145 T K C PCEGG+P VP++ +A L L W+ + D R+ + AKNF AA+ F N V +AE +GHHPDLHL YR V IVL+THA+GGL+END I+A I+ +P Sbjct: 5 TADELVRKTCSPCEGGIPPVPVDEAKAYLTHLEGWELAADGTRIKHTWTAKNFMAAIDFFNKVAELAELDGHHPDLHLEGYRNVTIVLWTHAIGGLSENDFILAAKINQIP 115
BLAST of NO10G00110 vs. NCBI_GenBank
Match: WP_068846097.1 (4a-hydroxytetrahydrobiopterin dehydratase [Planctopirus sp. JC280] >ODA34626.1 pterin-4-alpha-carbinolamine dehydratase [Planctopirus sp. JC280]) HSP 1 Score: 118.6 bits (296), Expect = 1.800e-23 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 0 Query: 41 KHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLID 142 K C+PCEGG+P + + LP +P W+ SDD+K +SR++ A+NF +A+ LNA+ +AEAE HHPDLHLTSYR + + L+THA+ GL+ENDLI+A I+ Sbjct: 30 KKCLPCEGGIPRLGPAEIATQLPLVPGWQVSDDNKMISRSWRARNFVSAMEQLNALADMAEAEQHHPDLHLTSYRHIRVDLWTHAIDGLSENDLILAAKIN 130
BLAST of NO10G00110 vs. NCBI_GenBank
Match: WP_068130565.1 (4a-hydroxytetrahydrobiopterin dehydratase [Roseimaritima ulvae]) HSP 1 Score: 118.6 bits (296), Expect = 1.800e-23 Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 0 Query: 41 KHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAV 144 K C+PCEGG+PA+ ++V L ++P W+ DD + R + KNF A+ L VG +AEAE HHPDLHLT YR V IVL THA+GGL+END I+A IDA+ Sbjct: 9 KRCLPCEGGVPAMTKDQVARHLQAVPNWQVDDDQSAIRRTWKLKNFVEAMRLLQRVGELAEAEQHHPDLHLTGYRHVAIVLTTHAIGGLSENDFIVAAKIDAL 111
BLAST of NO10G00110 vs. NCBI_GenBank
Match: WP_013564010.1 (4a-hydroxytetrahydrobiopterin dehydratase [Isosphaera pallida] >ADV61721.1 pterin-4-alpha-carbinolamine dehydratase [Isosphaera pallida ATCC 43644]) HSP 1 Score: 118.2 bits (295), Expect = 2.300e-23 Identity = 51/104 (49.04%), Postives = 72/104 (69.23%), Query Frame = 0 Query: 41 KHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVP 145 K CVPCEGG+P + + +A+ P W S+D +++ R ++ +NF A + FLN V A+AE EGHHPDLHL YR + I ++THA+ GL+END I+A IDA+P Sbjct: 13 KRCVPCEGGVPKLDRAQAEALRAQTPNWTLSEDGRKIRREWVVRNFMAGMDFLNKVAALAEEEGHHPDLHLVGYRHLAIEIWTHAIDGLSENDFILAAKIDALP 116
BLAST of NO10G00110 vs. NCBI_GenBank
Match: WP_008666959.1 (4a-hydroxytetrahydrobiopterin dehydratase [Rhodopirellula europaea] >EMI26654.1 pterin-4-alpha-carbinolamine dehydratase [Rhodopirellula europaea SH398]) HSP 1 Score: 117.1 bits (292), Expect = 5.200e-23 Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 0 Query: 32 SETCSRDAHKHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAV 144 S+T + + +HCVPCEGG+ + +E + L LP W ++ K++SR +F A+ LNA+ +AEAE HHPDLHLT YR + IVL THA+GGL+END +MA ID V Sbjct: 4 SKTSTDWSSRHCVPCEGGIDRIAVETAKQYLTELPNWSLDEEGKQISRKLNTGDFQTAVRHLNAIAELAEAEQHHPDLHLTGYRHLRIVLTTHAIGGLSENDFVMAARIDQV 115
BLAST of NO10G00110 vs. NCBI_GenBank
Match: XP_002506409.1 (hypothetical protein MICPUN_64545 [Micromonas commoda] >ACO67667.1 hypothetical protein MICPUN_64545 [Micromonas commoda]) HSP 1 Score: 116.7 bits (291), Expect = 6.800e-23 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 0 Query: 46 CEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVPAVYSPKWLKEHPE 158 C P + E VQ L ++P W +SR+F AKN+ A+ F+NA+ AVAE EGHHPD+HLT+YR+V + THA+GGL+ +D ++A +D + YSPKWL+E+ E Sbjct: 98 CSRDTPKLTAEEVQIRLKAVPTWTLDPSGAAISRSFTAKNWQCAVDFVNALSAVAEEEGHHPDVHLTNYRDVRVTASTHAIGGLSLHDFVLAAKLDTIDVTYSPKWLRENAE 209
BLAST of NO10G00110 vs. NCBI_GenBank
Match: WP_076349719.1 (4a-hydroxytetrahydrobiopterin dehydratase [Paludisphaera borealis] >APW63366.1 Putative pterin-4-alpha-carbinolamine dehydratase [Paludisphaera borealis]) HSP 1 Score: 116.7 bits (291), Expect = 6.800e-23 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 0 Query: 41 KHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVP 145 K CVPCEG +P + + +A+L ++ W S D +R+ R +IAKNF A + F V A+AE+EGHHPDLHL YR V I L+THA GGLTEND I+A I+ +P Sbjct: 12 KKCVPCEGDVPPLSPDEAKALLEAVADWSLSHDGQRIRREWIAKNFMAGIDFFEKVAALAESEGHHPDLHLEGYRNVAIELWTHAAGGLTENDFILAAKINEIP 115
BLAST of NO10G00110 vs. NCBI_GenBank
Match: WP_092048364.1 (4a-hydroxytetrahydrobiopterin dehydratase [Planctomicrobium piriforme] >SFH82427.1 4a-hydroxytetrahydrobiopterin dehydratase [Planctomicrobium piriforme]) HSP 1 Score: 116.3 bits (290), Expect = 8.900e-23 Identity = 53/104 (50.96%), Postives = 69/104 (66.35%), Query Frame = 0 Query: 41 KHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVP 145 KHCVPCEGG+P V + +L LP W+ + D + R + KNF A + FL+ V VAEAE HHPD+HLT YR V + L THA+GGL+END I+A I+ +P Sbjct: 12 KHCVPCEGGVPKVDRPAAERLLKELPGWELASDGNLIRRKWTVKNFVAGMNFLSKVADVAEAEQHHPDIHLTGYRNVSVELMTHAIGGLSENDFILAAKINDLP 115
BLAST of NO10G00110 vs. NCBI_GenBank
Match: PIQ85812.1 (pterin-4-alpha-carbinolamine dehydratase [Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26] >PIW65503.1 pterin-4-alpha-carbinolamine dehydratase [Candidatus Omnitrophica bacterium CG12_big_fil_rev_8_21_14_0_65_45_16]) HSP 1 Score: 115.9 bits (289), Expect = 1.200e-22 Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 0 Query: 41 KHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVP 145 K C+PCEGG+P + + + L S+P W+ + D ++ ++ K+F AAL F+NA+G +AE EGHHPDLHLT YR + I L THA+GGL+END I+A I+ +P Sbjct: 12 KKCLPCEGGVPKLTKAQAEQYLSSVPGWQLNRDGTSMNAQYVMKDFQAALNFINAIGKIAEDEGHHPDLHLTGYRRLSIDLNTHAIGGLSENDFILAAKINQLP 115
BLAST of NO10G00110 vs. NCBI_GenBank
Match: XP_005785851.1 (hypothetical protein EMIHUDRAFT_59448, partial [Emiliania huxleyi CCMP1516] >EOD33422.1 hypothetical protein EMIHUDRAFT_59448, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 115.2 bits (287), Expect = 2.000e-22 Identity = 55/98 (56.12%), Postives = 70/98 (71.43%), Query Frame = 0 Query: 46 CEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAV 144 C P +P + V A LP LP W SDD K +SR+F+AKN+ AA+AF+NA V E EGHHPDLHLT++R+V +VL THAVGGLT DL++A +D V Sbjct: 1 CGRDTPLLPADVVAARLPFLPDWALSDDGKAISRSFVAKNWGAAMAFINAASEVCEDEGHHPDLHLTNWRDVRVVLSTHAVGGLTLPDLVLAAKLDTV 98 The following BLAST results are available for this feature:
BLAST of NO10G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00110 ID=NO10G00110|Name=NO10G00110|organism=Nannochloropsis oceanica|type=gene|length=495bpback to top protein sequence of NO10G00110.1 >NO10G00110.1-protein ID=NO10G00110.1-protein|Name=NO10G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=165bpback to top Synonyms
Publications
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