NO10G00110, NO10G00110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00110 vs. NCBI_GenBank
Match: XP_005854194.1 (transcriptional coactivator pterin dehydratase [Nannochloropsis gaditana CCMP526] >XP_005855923.1 transcriptional coactivator pterin dehydratase [Nannochloropsis gaditana CCMP526] >EKU20438.1 transcriptional coactivator pterin dehydratase [Nannochloropsis gaditana CCMP526] >EKU22166.1 transcriptional coactivator pterin dehydratase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 235.3 bits (599), Expect = 1.300e-58 Identity = 118/167 (70.66%), Postives = 136/167 (81.44%), Query Frame = 0 Query: 12 IVIATAAAFLSS------ATXXXNSMSE--------TCSRDAHKHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVPAVYSPKWLKEHPEAESTAAK 165 +++A +AAF S +T NSMSE +C+RDA KHC+PCEGGLPA+ +ERVQAVLPSLPLW+ S DHKRLSR+F AKNFAAALAF++AVGAVAE EGHHPDLHLTSYREVE+VLYTHAVGGLTENDLIMA LID +PA YSPKWLKEHPEA +AA+ Sbjct: 12 VLVAVSAAFQVSFSPAALSTSYCNSMSESAPEVSPPSCTRDAKKHCLPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTIPASYSPKWLKEHPEAGKSAAR 178
BLAST of NO10G00110 vs. NCBI_GenBank
Match: EWM25234.1 (transcriptional coactivator pterin dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 234.6 bits (597), Expect = 2.200e-58 Identity = 119/167 (71.26%), Postives = 135/167 (80.84%), Query Frame = 0 Query: 12 IVIATAAAFLSS------ATXXXNSMSE--------TCSRDAHKHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVPAVYSPKWLKEHPEAESTAAK 165 +++A +AAF S +T SMSE +C+RDA KHCVPCEGGLPA+ +ERVQAVLPSLPLW+ S DHKRLSR+F AKNFAAALAF++AVGAVAE EGHHPDLHLTSYREVE+VLYTHAVGGLTENDLIMA LID VPA YSPKWLKEHPEA +AA+ Sbjct: 32 VLVAVSAAFQVSFSPAALSTSYCQSMSESAPEVSPPSCTRDAKKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVPASYSPKWLKEHPEAGKSAAR 198
BLAST of NO10G00110 vs. NCBI_GenBank
Match: OLP79970.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Symbiodinium microadriaticum]) HSP 1 Score: 130.2 bits (326), Expect = 6.000e-27 Identity = 60/113 (53.10%), Postives = 77/113 (68.14%), Query Frame = 0 Query: 46 CEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVPAVYSPKWLKEHPEA 159 C P + E V A +P LPLW S D +SR F+AKN+AAA++FLN V +AE EGHHPD+H+TSYR V + L THA+GGL+ D ++A +D + YSPKWLKEHP A Sbjct: 295 CGKDTPGLSREEVLARIPLLPLWVLSPDGASISRCFVAKNWAAAMSFLNEVSVLAEQEGHHPDVHITSYRNVRVELSTHAIGGLSLPDFVLAAKMDQIKVEYSPKWLKEHPVA 407
BLAST of NO10G00110 vs. NCBI_GenBank
Match: CBJ27919.1 (heme peroxidase-related protein [Ectocarpus siliculosus]) HSP 1 Score: 129.4 bits (324), Expect = 1.000e-26 Identity = 61/119 (51.26%), Postives = 80/119 (67.23%), Query Frame = 0 Query: 41 KHCVPCEG----GLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVPAVYSPKWLKEH 156 K C PCEG GL ++ L SLPLW ++ + + R+F+AKNF +A+AFLN V VAE +GHHPDLHLT YR VEI L TH++GG+T+ND+ A L D +P YSPKW +E+ Sbjct: 158 KVCAPCEGGSESGLNVYTTRELEKELASLPLWTSTPNGDFIIRSFVAKNFVSAMAFLNEVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTQNDIAEARLFDQLPVTYSPKWQREN 276
BLAST of NO10G00110 vs. NCBI_GenBank
Match: PNH09126.1 (putative pterin-4-alpha-carbinolamine dehydratase [Tetrabaena socialis]) HSP 1 Score: 124.4 bits (311), Expect = 3.300e-25 Identity = 60/118 (50.85%), Postives = 75/118 (63.56%), Query Frame = 0 Query: 46 CEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVPAVYSPKWLKEHPEAESTAA 164 C P V +Q + +LP W+ S D LSR F AKNF AA+ F N V VAEAEGHHPDLHL ++REVE+ L THAVGG+T DL++A +DA+ YSPKW K+ E + A Sbjct: 63 CTRDTPKVAPAELQGYMRALPAWQVSSDQAMLSRTFTAKNFMAAIRFFNKVAEVAEAEGHHPDLHLRNFREVEVNLSTHAVGGITLPDLVLAAKLDALEVEYSPKWAKQQEERMAAEA 180
BLAST of NO10G00110 vs. NCBI_GenBank
Match: XP_001692301.1 (heme peroxidase-related protein [Chlamydomonas reinhardtii]) HSP 1 Score: 123.2 bits (308), Expect = 7.300e-25 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = 0 Query: 46 CEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVPAVYSPKWLKEHPEAESTA 163 C P V + + + SLP W+ + D +SR+F+AKNF AA+AF N V VAEA+GHHPDLHL ++REVE+V+ THAVGG+T DL +A +ID + YSPKW K E + A Sbjct: 68 CNKDTPKVEPADLASYMRSLPAWRLNADSTAISRSFVAKNFMAAIAFFNKVAEVAEAQGHHPDLHLRNFREVEVVVSTHAVGGITLPDLALAAMIDGIEVDYSPKWAKAEVERMAAA 184
BLAST of NO10G00110 vs. NCBI_GenBank
Match: WP_015246352.1 (4a-hydroxytetrahydrobiopterin dehydratase [Singulisphaera acidiphila] >AGA27203.1 pterin-4a-carbinolamine dehydratase [Singulisphaera acidiphila DSM 18658]) HSP 1 Score: 123.2 bits (308), Expect = 7.300e-25 Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 0 Query: 41 KHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVP 145 K C PCEGG+P VP + +A+L + WK +DD R+ R++ AKNF AA+ F N V +AE +GHHPDLHL YR V I L+THA+GGL+END I+A I+ +P Sbjct: 12 KKCSPCEGGIPPVPADEARALLTHIEGWKLADDGTRIKRSWTAKNFMAAIDFFNKVAELAEQDGHHPDLHLEGYRNVSIELWTHAIGGLSENDFILAAKINQLP 115
BLAST of NO10G00110 vs. NCBI_GenBank
Match: PNW84164.1 (hypothetical protein CHLRE_04g223800v5 [Chlamydomonas reinhardtii] >PNW84165.1 hypothetical protein CHLRE_04g223800v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 123.2 bits (308), Expect = 7.300e-25 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = 0 Query: 46 CEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVPAVYSPKWLKEHPEAESTA 163 C P V + + + SLP W+ + D +SR+F+AKNF AA+AF N V VAEA+GHHPDLHL ++REVE+V+ THAVGG+T DL +A +ID + YSPKW K E + A Sbjct: 27 CNKDTPKVEPADLASYMRSLPAWRLNADSTAISRSFVAKNFMAAIAFFNKVAEVAEAQGHHPDLHLRNFREVEVVVSTHAVGGITLPDLALAAMIDGIEVDYSPKWAKAEVERMAAA 143
BLAST of NO10G00110 vs. NCBI_GenBank
Match: WP_068419222.1 (4a-hydroxytetrahydrobiopterin dehydratase [Planctomyces sp. SH-PL62] >AMV39701.1 Putative pterin-4-alpha-carbinolamine dehydratase [Planctomyces sp. SH-PL62]) HSP 1 Score: 121.3 bits (303), Expect = 2.800e-24 Identity = 55/104 (52.88%), Postives = 74/104 (71.15%), Query Frame = 0 Query: 41 KHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVP 145 K CVPCEGG+P + + V A++ ++P W +D KR+ R + A+NF A L FL+ VG +AE EGHHPDLHL YR V I + THA+GGL+END I+A I+A+P Sbjct: 12 KKCVPCEGGVPPLEPDVVDALIRTVPGWTLDEDGKRIHRGWTARNFVAGLHFLDKVGELAEEEGHHPDLHLEGYRNVAIEITTHAIGGLSENDFILAAKINAIP 115
BLAST of NO10G00110 vs. NCBI_GenBank
Match: OJW26967.1 (pterin-4-alpha-carbinolamine dehydratase [Planctomycetales bacterium 71-10]) HSP 1 Score: 121.3 bits (303), Expect = 2.800e-24 Identity = 56/104 (53.85%), Postives = 72/104 (69.23%), Query Frame = 0 Query: 41 KHCVPCEGGLPAVPLERVQAVLPSLPLWKASDDHKRLSRAFIAKNFAAALAFLNAVGAVAEAEGHHPDLHLTSYREVEIVLYTHAVGGLTENDLIMAGLIDAVP 145 + CVPCEGG+P + E V+ +L ++ W S D KR+ R + AKNF A L F + VG +AEAEGHHPDL LT YR V + + THA+GGL+END I+A ID VP Sbjct: 12 RKCVPCEGGVPPLAREEVEELLKAVAGWSLSSDGKRIRREWTAKNFVAGLRFFDKVGELAEAEGHHPDLSLTGYRNVAVEITTHAIGGLSENDFILAAKIDEVP 115 The following BLAST results are available for this feature:
BLAST of NO10G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00110 ID=NO10G00110|Name=NO10G00110|organism=Nannochloropsis oceanica|type=gene|length=495bpback to top protein sequence of NO10G00110.1 >NO10G00110.1-protein ID=NO10G00110.1-protein|Name=NO10G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=165bpback to top Synonyms
Publications
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