NO09G03780, NO09G03780 (gene) Nannochloropsis oceanica

Overview
NameNO09G03780
Unique NameNO09G03780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1708
Alignment locationchr9:1084375..1086082 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1084375..1086082 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR006342FkbM_mtfrase
Homology
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_012229501.1 (PREDICTED: uncharacterized protein LOC105676311 isoform X3 [Linepithema humile])

HSP 1 Score: 105.1 bits (261), Expect = 4.300e-19
Identity = 70/200 (35.00%), Postives = 108/200 (54.00%), Query Frame = 0
Query:  153 GFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEK-LKANAPRRPNSDLLNV--APSCEKFEFVNLLKQANTGISLHESVYEEEGQLSW---QIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVK-LKSQVLEVLASNGF----VEDTSINVKSSKVFLKQ 342
            GFF+E G +DG T +NT F E   GWSGLLIEA P++F K L+ N     +   L+V  +PS E F     + + +   +  +        +++    I+ QC PLS Y+  LGV  +D+ SLDVE  E  VL TI F  +D+KVL VE     Y  N +K +K +K  +++++   G+      + S N+ +  +F+K+
Sbjct:   89 GFFIECGAYDGETRSNTLFLERFNGWSGLLIEADPINFTKMLQKNRRAYLSPTCLSVINSPSVEFFLMAKNVGRLHEPENTTQDAPTNSPDVAYTGKHIRVQCFPLSVYIAALGVKTVDYFSLDVEGNEIDVLETIPFNEVDIKVLSVE-----YIHNAKKDIKDIKQYMIDMMKQRGYYVYKFVERSDNLANDIIFVKR 283          
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_015365247.1 (PREDICTED: uncharacterized protein LOC107162747 [Diuraphis noxia])

HSP 1 Score: 102.1 bits (253), Expect = 3.600e-18
Identity = 63/154 (40.91%), Postives = 86/154 (55.84%), Query Frame = 0
Query:  153 GFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCEKF----EFVNLLKQANTGISLHESVYEEE-------GQLSWQIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVE 296
            GFF+E G  DG T +NT +FE   GW+GLLIEA PL+F K+  N  RR       ++P+C       E V+ L+++N G   ++ V E+E        + S  +  QC P   YL  L VT ID+ SLDVE  E  VL+TI F  +D++ L VE
Sbjct:  119 GFFIECGALDGETRSNTLYFERYYGWTGLLIEADPLNFVKM-LNKGRR-----AYLSPTCLSVNPYPEIVSFLQRSNMGRIANDEVVEDEVISNDFGXKKSSVVNVQCFPFYTYLLALNVTVIDYFSLDVEGSELNVLKTIPFDKIDIRTLSVE 266          
BLAST of NO09G03780 vs. NCBI_GenBank
Match: EJK44166.1 (hypothetical protein THAOC_37316 [Thalassiosira oceanica])

HSP 1 Score: 100.1 bits (248), Expect = 1.400e-17
Identity = 69/201 (34.33%), Postives = 103/201 (51.24%), Query Frame = 0
Query:   95 YVPRLAGAIPPVIPAEAQAACLES---WTTANEAGTERSRFDEDLLIYHKY---FADRPGDAAP---GFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSC-EKFEFVNLLKQANTGISLHESVYEEEGQLSWQIKAQCGPLSFYLREL-GVTKIDFLSLDVEAFEYYVLRTIDF 285
            Y  R  G +P +        C +S   +       TERSRF ED +IY  +      R G+  P   G ++ELG F+G  E+NT FF+ CLGW GLLIEA   S++++  N   RP++  ++ +P+C E+ E   +     +   + +      G+ +  ++  CGPL   L+++ G   I F SLDVE  E  VL TIDF
Sbjct:   23 YASRYHGLLPSINQETPDDVCGDSPDFFPFFQLPKTERSRFSEDYIIYGLFKNTTLPRRGETLPLPRGAYVELGAFNGRDESNTMFFDRCLGWKGLLIEAQAQSYQQVIEN---RPHAIKMSFSPTCHEEGETAKIYDYPLSNNGMEDLAKSYTGKET--VEIPCGPLGPVLQDVFGTDGIAFFSLDVEGAELLVLETIDF 218          
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_014261527.1 (protein Star-like [Cimex lectularius])

HSP 1 Score: 99.0 bits (245), Expect = 3.100e-17
Identity = 61/146 (41.78%), Postives = 83/146 (56.85%), Query Frame = 0
Query:  153 GFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSF-EKLKAN--APRRPNSDLLNVAPSCEKFEFVNLLKQANTGISLHESVYEEEGQLSWQIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVE 296
            GFF+E+G  DG T +NT +FE  L W+GLLIE  PL+F E L+ N  A   P    +N  P   +FE     +  N G  +   V  ++ + +  +  QC PL  YL  L  T+ID+ SLDVE  E  VL+TI F+ALD++ L VE
Sbjct:  113 GFFIEVGALDGETRSNTLYFERYLNWTGLLIEPDPLNFAEMLRKNRRAWLSPCCVSINPYPEIVQFE-----QNKNMGKIVGTGVNNDKKESTSTVDVQCFPLYSYLLALNRTRIDYFSLDVEGAELAVLKTIPFQALDIQTLSVE 253          
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_005818722.1 (hypothetical protein GUITHDRAFT_98750, partial [Guillardia theta CCMP2712] >EKX31742.1 hypothetical protein GUITHDRAFT_98750, partial [Guillardia theta CCMP2712])

HSP 1 Score: 98.6 bits (244), Expect = 4.000e-17
Identity = 66/194 (34.02%), Postives = 88/194 (45.36%), Query Frame = 0
Query:  129 RSRFDEDLLIYHKYFA---DRPGDAAPGFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCEKFEFVNLLKQANTGISLHESVYEEEGQLSWQ-----IKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVKLKSQ 315
            RS+  ED   Y  +F+        A  G F+ELG  DGLT +NT  FE   GW GLLIEA P +F KL ++ P    S +L  A  C     V+ +   +  +         +    W       K  C PL + L    +  +D LSLDVE  E  VL+TIDF++    V+LVE          E    L+SQ
Sbjct:   18 RSQSGEDEFAYRNFFSASIKHKRLAGNGTFVELGALDGLTFSNTHAFEKSFGWHGLLIEADPSNFAKLVSHRP----SQILVHAAVCSNLSVVDYVTSGHPAVKGILQFMSPQFLRGWHRTYQLTKILCVPLEYVLNMFAIVHVDMLSLDVEGGELEVLKTIDFESHTFSVILVEAEGLDRQKEREVIAFLQSQ 207          
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_017887714.1 (PREDICTED: uncharacterized protein LOC108629500 [Ceratina calcarata])

HSP 1 Score: 98.2 bits (243), Expect = 5.300e-17
Identity = 67/193 (34.72%), Postives = 97/193 (50.26%), Query Frame = 0
Query:  149 DAAPGFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSC---EKFEFVNLLKQANTGISLHESVYEEE--------GQLSWQIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVKLKSQVLEVLASNGFVEDTSI 331
            +A  GFF+E G +DG T +NT   E   GW+GLLIEA P++F K+      R N   L ++PSC     +  VN    A+    LHE   E+               IK QC P +  +  L VT ID+ SLD+E  E  VL+TI F  +D+  L VE S+   +S+ E       ++ + + S G++  TS+
Sbjct:  147 NAKNGFFVECGAYDGETRSNTLVLERFFGWTGLLIEADPINFSKMV-----RKNRRAL-LSPSCLAVHPYPSVNTFLMADNVGRLHEPNEEDRHRQNSADVAYTGQHIKVQCIPFAHLMAALNVTAIDYFSLDIEGSELEVLKTIPFDKIDITALSVEFSH--IESDVE-------ELNQFMDSKGYIISTSL 324          
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_011135245.1 (PREDICTED: uncharacterized protein LOC105180701 isoform X1 [Harpegnathos saltator])

HSP 1 Score: 97.4 bits (241), Expect = 9.000e-17
Identity = 57/154 (37.01%), Postives = 82/154 (53.25%), Query Frame = 0
Query:  149 DAAPGFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEK-LKANAPRRPNSDLLNVA---PSCEKFEFVNLLKQANTGISLHESVYEEEGQLSW---QIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVE 296
            D   GFF+E G +DG T +NT + E   GWSGLLIEA P++F K L+ N     +   L+VA   P+   F     L + +   +    +      +++    I  QC PL+ Y+  LG+  +D+LSLDVE  E  +L TI F  +D+K L VE
Sbjct:  150 DKRNGFFIECGAYDGETRSNTLYLERFRGWSGLLIEADPINFTKMLQKNRRAYLSPTCLSVAKESPTLASFLMARNLGRLHVADNTTGDISSNTADVAYTGQHIHVQCFPLTLYIAALGIKTVDYLSLDVEGNEIEILETIPFNEVDIKALSVE 303          
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_018015797.1 (PREDICTED: uncharacterized protein LOC108672609 [Hyalella azteca])

HSP 1 Score: 97.4 bits (241), Expect = 9.000e-17
Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 0
Query:  153 GFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKA-NAPRRPNSDLLNVAPSCEKFEFVNLLKQANTGISLHESVYEEEGQLSWQIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVKLKSQVLEVLASNGFVEDTSI----NVKSSKVFLK 341
            GFF+E GG DG   +NT FFE   GW GL+IEA P++F ++K  N     +   L+   + EK  F    + +N G  +++    ++      +  QC P   Y++ L VT +D+ SLDVE  EY VL++I +  +D+K L VE     +D      V+ K+ + ++L +NG+   T +    N+ +  +F+K
Sbjct:  119 GFFVECGGLDGELRSNTLFFERFRGWKGLVIEADPVNFAQMKTKNRKAYISPSCLSTTSNPEKVVFA---QNSNRG-HIYDVESYDDAPAKGLVNVQCFPFISYMKALNVTTVDYFSLDVEGAEYKVLQSIPWDDVDIKTLSVEY---LHD------VEGKAAIRKLLLANGYSVFTEVSAAFNLANDFIFVK 298          
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_022161109.1 (LOW QUALITY PROTEIN: protein Star-like [Myzus persicae])

HSP 1 Score: 97.4 bits (241), Expect = 9.000e-17
Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 0
Query:  153 GFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCEKF----EFVNLLKQANTGISLHESVYEEE--GQLSWQIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVE 296
            GFF+E G  DG T +NT   E   GW+GLLIEA PL+F K+     R        ++P+C       E V+ L+++N G   ++ V E++   + S  +  QC P   Y+  L +T ID+ SLDVE  E  VL+TI F  +D++ L VE
Sbjct:  102 GFFIECGALDGETRSNTLXLERYYGWTGLLIEADPLNFAKMLKKGRR------AYLSPTCLSVNPYPEIVSFLQRSNMGRIANDEVVEDDIFRRKSPSVNVQCFPFYTYILALNITVIDYFSLDVEGSELNVLKTIPFDKVDIRTLSVE 244          
BLAST of NO09G03780 vs. NCBI_GenBank
Match: NP_001164122.1 (star protein [Acyrthosiphon pisum] >BAH72647.1 ACYPI002776 [Acyrthosiphon pisum])

HSP 1 Score: 97.1 bits (240), Expect = 1.200e-16
Identity = 59/154 (38.31%), Postives = 83/154 (53.90%), Query Frame = 0
Query:  153 GFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCEKF----EFVNLLKQANTGISLHESVYEEE-------GQLSWQIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVE 296
            GFF+E G  DG T +NT +FE   GW GLLIEA PL+F K+     R        ++P+C       E V+ L+++N G   ++ V E+E        + S  +  QC P   YL  L +T ID+ SLDVE  E  VL+TI F  ++++ L VE
Sbjct:  122 GFFIECGALDGETRSNTLYFERYYGWVGLLIEADPLNFVKMLKKGRR------AYLSPTCLSVNPYPEIVSFLQRSNMGRIANDEVVEDEVISDDYGKKKSPIVNVQCFPFYTYLLALNITVIDYFSLDVEGSELNVLKTIPFDKINIRTLSVE 269          
The following BLAST results are available for this feature:
BLAST of NO09G03780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_012229501.14.300e-1935.00PREDICTED: uncharacterized protein LOC105676311 is... [more]
XP_015365247.13.600e-1840.91PREDICTED: uncharacterized protein LOC107162747 [D... [more]
EJK44166.11.400e-1734.33hypothetical protein THAOC_37316 [Thalassiosira oc... [more]
XP_014261527.13.100e-1741.78protein Star-like [Cimex lectularius][more]
XP_005818722.14.000e-1734.02hypothetical protein GUITHDRAFT_98750, partial [Gu... [more]
XP_017887714.15.300e-1734.72PREDICTED: uncharacterized protein LOC108629500 [C... [more]
XP_011135245.19.000e-1737.01PREDICTED: uncharacterized protein LOC105180701 is... [more]
XP_018015797.19.000e-1732.64PREDICTED: uncharacterized protein LOC108672609 [H... [more]
XP_022161109.19.000e-1738.26LOW QUALITY PROTEIN: protein Star-like [Myzus pers... [more]
NP_001164122.11.200e-1638.31star protein [Acyrthosiphon pisum] >BAH72647.1 ACY... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR056ncniR056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03780.1NO09G03780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|607426gene_9705Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03780.1NO09G03780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03780 ID=NO09G03780|Name=NO09G03780|organism=Nannochloropsis oceanica|type=gene|length=1708bp
ACAGACACATCCATCGTCATTGTGCAAACGCGTCGCTTACACGGTTAGAG
GTACAGCATCGGATCATCCGACAGCGTGGCCAGCTTTTTTTCGCTGTGGC
CGTGAGTGAGGATCGACGCATCTGCACCTGTAACTGTCTCTGCGGCCCCC
AATCACGCTGCCATCAGCATCCCCTGCCTGAACGCGAAATCAGGGAATGA
GGAAAACTCTTTCTGCGCCTTGGCGCATGACCACAAAAGCGGCGTCCAGG
TCACGGCCATCCCTCATTTTTGCCATGATGCTCAGTTTTGGCCTTGCCTA
CCATTATTTTGGGCCAGAATATGGCAGCGGTCACAGCATGATTGCGGCAA
TTTTCTCAACACCAACCACGGTGCTTGCGGCCGACGCTTCCCCCCCGAGA
CCCCAAGGCTTTCGCAGTGTTAACGAAATACACTGCAACGATGCAGCGAA
GGAGAATGCTTGCCAAGGGGCCTTCGAGTACGTGCCTCGTCTTGCCGGCG
CTATTCCACCTGTAATCCCCGCCGAGGCGCAGGCAGCTTGCTTGGAAAGC
TGGACGACGGCAAACGAAGCCGGGACTGAAAGGAGCCGTTTCGATGAGGA
TCTCCTAATTTATCACAAATATTTCGCCGACCGCCCTGGCGATGCTGCAC
CAGGCTTCTTTCTCGAGCTTGGTGGCTTCGACGGGTTGACCGAAACGAAC
ACTCGCTTCTTTGAGGCGTGTTTGGGCTGGTCTGGACTGCTCATCGAGGC
ATCACCGCTCAGCTTCGAAAAGCTGAAGGCGAATGCCCCGAGGCGACCAA
ACAGTGACTTGCTGAACGTTGCCCCGTCCTGCGAAAAATTTGAGTTTGTG
AACCTTCTCAAGCAAGCTAATACAGGTATATCTTTGCATGAGTCCGTGTA
CGAAGAAGAAGGCCAATTGTCATGGCAAATCAAGGCGCAATGCGGGCCAC
TGAGCTTTTACTTGCGGGAGTTGGGCGTGACCAAGATTGACTTTTTGAGT
TTGGACGTGGAGGCATTTGAATATTATGTGCTGCGCACCATTGATTTTAA
GGCTCTCGACGTAAAAGTGTTGCTGGTAGAAGTGTCCAATCGCTTTTACG
ACTCCAACACGGAGAAATTCGTCAAGCTGAAGTCGCAGGTCCTGGAGGTG
TTGGCCAGCAATGGCTTCGTGGAAGACACGAGCATTAACGTGAAATCGAG
CAAGGTATTTTTGAAACAGGGTGACCTATAGAAAATGATTTCAATGGCCC
AAATAGGAGTCGTGCAGAGCAAGTACTGGCGTGTCTCGGGTTTTCCTCCT
TCTCTTTTTATCCCCTTCTAAAGGATAGCCACGGAGATGTTGTCGTGAAT
CAGCCAGGAAACCGAACAAGGATGATATACACACGTACATGTGCGTGAGC
GATGTCCCATTGATTGGATCATGCGCCCGGCGGGCGTACTGTGGGCCGTG
AATTTATAAAAGACGATGATTACGTGGCCAAGGGTATGTGATTGAGTGCC
TGTTGCACGTGCAGACGTTAGATGTCTACTCTTCTGCACATTCTACGTGT
TTCCATTTATAGACTTGCATGAATCTACGTTCGCGAGTTGTGTTGAATTT
GCCTGTGGAATGTCTTATTATGGCTGCATGCGAGCTTGACTTCGGCGGAA
ACTACCGAGTCAAACCTCGAACCTTGAAAGTAGATTAACAACAAAGTAGC
TGTCGAGA
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protein sequence of NO09G03780.1

>NO09G03780.1-protein ID=NO09G03780.1-protein|Name=NO09G03780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bp
MRKTLSAPWRMTTKAASRSRPSLIFAMMLSFGLAYHYFGPEYGSGHSMIA
AIFSTPTTVLAADASPPRPQGFRSVNEIHCNDAAKENACQGAFEYVPRLA
GAIPPVIPAEAQAACLESWTTANEAGTERSRFDEDLLIYHKYFADRPGDA
APGFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRR
PNSDLLNVAPSCEKFEFVNLLKQANTGISLHESVYEEEGQLSWQIKAQCG
PLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRF
YDSNTEKFVKLKSQVLEVLASNGFVEDTSINVKSSKVFLKQGDL*
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Synonyms
Publications