NO09G03500, NO09G03500 (gene) Nannochloropsis oceanica

Overview
NameNO09G03500
Unique NameNO09G03500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4060
Alignment locationchr9:999909..1003968 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:999909..1003968 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO09G03500 vs. NCBI_GenBank
Match: EWM27454.1 (hypothetical protein Naga_100107g5 [Nannochloropsis gaditana])

HSP 1 Score: 710.3 bits (1832), Expect = 9.900e-201
Identity = 460/1063 (43.27%), Postives = 578/1063 (54.37%), Query Frame = 0 
Query:  108 FSDPVADWMHTGLLLQAVGKSPVLNKFITDLSKDYYGQVLLQVHGSEDEDFKSVLVQHATN-RCMAGAVG-ANTAGNYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLTWSNTHTSLLKDPVNGAWEACKLYAPPLGPASLVSSINFSPEATDTYTKLHILANYKAFSPLLNLDVTSNAANLAQEWVSSMEWMKKEGRMKFDEALTTLTALLEGMAQVYPSVRHALPPTLAALQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSAAAAVAALQTAMDGEGAEVGDVVRVLKKQGEEAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK---SLEGDRDDKERWEAHLKYHPGLREPVVAQVLGFRQHLKDGRARDIIREVLRTFQDHQRGTSPLLPVEIHTLQENLAMAAVVLGNPTLALSAIQKALPGNASXXXXXXXXXXXXSPSLPPCFSYCPSALRVKVLALESKGEEPKSKGVKEG-GKERDLAAGHPTYAALNALEGMKEGDTLKEDSARRVTYLTTLAVYLYHQLKRLGGG-GEDGREGGVIQTAVKQGLGYLKEAVGMFGKEEXXXXXXXXXXXXXXVDKKWVRLSRKGEPMLWIQTNRLLAVFYAEDCLSPFLPQHFDLSIEAYQVSLHHAALLLQRVPKKQIPEVNSLINTLRFELARGYARRKKDETDEMACFTLLSQAEAALLHTQKEELGRLLHFEGTLWEEKGRRQ---RGREGGEEELRKAVGTYEKXXXXXXXXXXXXXXXXXXXXXXHLVGLYKSIGSIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLSPAEQAIRNADLEKAINKFTHAYALLSKYMEAGGKTSFEAGQVAFAIGDLYLKRKKEKRAKNLESGIGWFEKAEMGIRKSASDRTDAAGRYLPLYTQLWGKLSVMWRERAGLRKKEGGGEK-KVKEDLEKSEKYGLLYQNARRNYEKRTEALMAGKMEQLNLGDEGKERGE 1160
            FS P+ DW+ TG LLQA G S VLNKF+TDLSK+Y+GQ+LLQV   + +  + VL+QHA   R  A  VG   T  N G                                            L+W NT  S LK PV GAWEA K+Y PPLGP  L  S   +PE +D   KL +L  YKAFSP+L+  +T+ AA  AQEWV S  WMKK+G  +FD+AL  L+ALL GMA VYPSVR ALP  L  LQ                                                            +A  A+ ALQTAMD E  +VGD VR  +K+ E  I                                     +   S      ++  WEAHLK+H GL + V +++  FRQ L+DG+A+D+IR+VL   + HQ   + LLPV++H LQENL  AA+V+GNPTLALSA+ KA                  +P+LPPC  YCP ALR+K LALE KGEE  +K  +EG   E+     H T  AL+ L  +++ D  + DS RR +YLT+ AV+ YH+LKRL  G G  G      +  V++GLG L++A GMF  +               VD KWV LS+ G+ MLWIQTNRLLA+FYAE CL+P LP H DLSI AYQ +L  A  LL         E +S+++TLRFELAR YARR K+E DE  C  LL +AEAALL +Q+EE+GRLLH+ G L EEKGR++       GGE+ELR+A+  + +                      +++GL KS+  IY                             XXXXXXXXXXX                  +LSP +QAI NADLEKAIN++T+AY LLS     GGK SFEAGQVAFAIGDLYL+R+KEKRA+N+E+ I WFEKAE  IR+SA DR DA+GRYLPLYTQL+GKL+ +W ERAGLRKKEGGG   KVKEDL K E YG+L+ NARRNYE R + L     + L + +EGK+RG+
Sbjct:  116 FSAPILDWLSTGFLLQAAGASTVLNKFLTDLSKEYFGQILLQVQRQDAKGLREVLMQHAQEPRATALGVGMCATENNSGIKSKLVKSKDKITKRNGNETEQVGLTGPSSVLGPV--------ALSWENTALSRLKHPVKGAWEAAKVYGPPLGPTPLALSGQATPETSDPDLKLAVLTKYKAFSPVLDPSLTATAAATAQEWVESTTWMKKDGGGRFDKALDNLSALLSGMAAVYPSVRAALPTALEGLQKVQEVRNSLRSGEEGRGMGKEEVEGLIRWRVRRLLCQAWAGRKAKEKGEVL---------AAENALTALQTAMDAEDVQVGDFVRACRKEEETKIETADTKGQGGNDSEGVVDGRGELSERAVRNKEEEVEERTSMSAAESMSEQRAWEAHLKHHSGLSQAVASRIAAFRQWLQDGKAQDVIRDVLLLLRQHQHKETCLLPVDVHVLQENLGKAALVVGNPTLALSALDKA--------GKVGVCTEGDNPTLPPCVEYCPLALRLKALALEVKGEEEATK--REGSAAEKTEDEPHATELALDVLGDLRKEDIERNDSVRRASYLTSAAVHTYHRLKRLSNGEGGQGEAPEKTRVVVERGLGLLEQARGMFDADR-NEEGTEGGRWVSLVDPKWVSLSQDGDAMLWIQTNRLLAIFYAEPCLAPSLPHHHDLSIAAYQAALLPATRLLDGT-----LEAHSMVHTLRFELARAYARRGKNEQDEATCLALLREAEAALLPSQREEMGRLLHYTGRLLEEKGRKKVEDENEGGGEKELREAIELFGR--AVEAFEGVRAKPKGEEERLNYMIGLNKSMAGIY-------------VTLMKSMDKGCEGRSDXXXXXXXXXXXKNGQQQLSGKPSLFPSSPSLSPPKQAIWNADLEKAINRYTNAYTLLSAVAGGGGKASFEAGQVAFAIGDLYLQRRKEKRARNVENAIAWFEKAERDIRRSAPDRKDASGRYLPLYTQLYGKLAGLWHERAGLRKKEGGGSSGKVKEDLRKGEAYGVLFTNARRNYELRADVLAGRMADGLRVEEEGKDRGK 1130
The following BLAST results are available for this feature:
BLAST of NO09G03500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27454.19.900e-20143.27hypothetical protein Naga_100107g5 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR076ncniR076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010896NSK010896Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03500.1NO09G03500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100107g5gene3104Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03500.1NO09G03500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03500 ID=NO09G03500|Name=NO09G03500|organism=Nannochloropsis oceanica|type=gene|length=4060bp
ATGCCACCCAAGAAAGGAGGCGCACCAGGCGGCGCAGACCAAGTCAGCAA
GCACAAAGCAGCACCCGGCAAAGTCCCGTTGCCTCCCCCCCCACCTCCGG
CTGCTCCTGCTTCTGCCAAAAAAACAAACGGCAGAAACAGCAATGGCGGC
GGTGGAGTGAGGGAGACGAAGGCACATCCGCCTCCTACTCCTCTCGCCAC
CGCCGGGGCGCCTCCTGCGCCCGCAGCACCTGCGAAGAAAGAAGCAACAG
CGTTGGCCGCCGCAACCAAGAATAAGAATAAGAATAAGGCCACTTCCTCT
CACACTACCAGCCGCAAGTCCTTCTCGGACCCCGTCGCCGACTGGATGCA
CACGGGCCTCTTGCTGCAAGCAGTGGGTAAATCCCCGGTCCTCAACAAAT
TCATCACAGACCTGTCAAAAGATTACTATGGCCAGGTCCTCTTGCAGGTG
CATGGAAGCGAGGACGAAGACTTCAAGTCCGTGTTGGTGCAACACGCGAC
GAATAGGTGTATGGCGGGGGCAGTTGGTGCTAATACTGCTGGGAATTATG
GCAGCAGCAAGAACAGCAGCAGCAGCAGCAGCAAGAAAGTATTGACAGGA
AAGACGAATGGCGCGACAGCAGCCAGCAGCAGCAGCAGTAATAATCGTAA
GAACAGCAGCAGCGTTGGCAGTAGCACACCTTTACTGACATGGAGCAACA
CCCACACCTCGTTACTCAAAGACCCCGTCAACGGCGCCTGGGAGGCCTGC
AAGCTCTATGCTCCCCCCTTGGGCCCTGCCTCCCTCGTGTCCTCCATCAA
TTTCTCTCCTGAGGCCACAGACACGTACACCAAACTTCATATCCTAGCCA
ATTACAAGGCGTTTTCACCTTTGTTGAACCTCGATGTGACGAGCAACGCT
GCGAATTTGGCCCAGGAATGGGTGTCGAGCATGGAGTGGATGAAGAAGGA
GGGGAGGATGAAGTTTGATGAGGCTCTTACGACATTGACGGCACTGCTGG
AGGGGATGGCTCAGGTCTACCCCTCTGTCCGACACGCCCTCCCTCCCACC
CTCGCTGCGCTCCAGGCCATCAAGGCGGCCAAGGAGGGTGGGAAGGAGGG
TGGGAAGGACGGTGGGAAGGAGGAGGGGAAGAAGGCGGCCCTGCTCACAG
ACGACGTGGTTCGAGAGCTGATTCAAGCGAGGCTGTCGCCATTGCTGAAC
GAAGGCTGGGCGGGAGGGCGGGCGGGAAGCAAGGCACGAGTCCACTCAGC
AGCAGCGGCAGTGGCAGCGTTACAGACTGCCATGGACGGGGAGGGGGCAG
AAGTGGGAGATGTGGTGAGAGTATTGAAAAAGCAGGGCGAGGAAGCAATT
GTGGAGGAGGAGAAGCTGGAGAAGCACAAGGAGAAGGAGGAGTCACAGGC
AACGACAGAAGCAGCCGACGGAACAGCAGCGGCAGCAGCAGAAAAAGCAA
GAAGCGAGGAGAAGAGCCTCGAGGGTGACAGGGACGATAAAGAAAGATGG
GAGGCCCATCTAAAATATCACCCGGGGCTACGCGAACCCGTTGTTGCCCA
AGTGCTCGGCTTCCGCCAGCATCTCAAGGACGGACGAGCCAGGGACATCA
TCCGTGAAGTTCTAAGAACCTTCCAAGACCACCAACGCGGCACCTCTCCT
CTCCTTCCCGTCGAGATCCACACCCTACAAGAAAATCTAGCCATGGCAGC
AGTAGTACTAGGCAACCCCACCCTTGCTCTCTCAGCGATACAGAAAGCTT
TACCGGGCAATGCGAGCAGCAGCAGCAGCAGCAGTTGCAGTGGAAGTGAC
GATTCACCATCCCTCCCGCCCTGCTTCTCCTACTGTCCTTCGGCGTTGCG
TGTTAAGGTCTTGGCTTTGGAAAGCAAGGGAGAGGAGCCGAAGAGTAAGG
GGGTGAAGGAGGGAGGGAAAGAGAGGGACCTGGCGGCTGGGCACCCTACG
TACGCGGCATTGAACGCGTTGGAAGGGATGAAGGAAGGGGATACACTGAA
AGAGGACAGTGCACGACGAGTGACTTATTTGACCACCCTCGCCGTTTATC
TTTACCATCAGTTGAAGAGATTGGGAGGGGGAGGGGAAGACGGGAGGGAG
GGAGGGGTGATCCAGACGGCGGTGAAGCAAGGATTGGGCTATTTGAAGGA
GGCGGTGGGAATGTTCGGAAAGGAGGAGGGGGAGGAAGAGGGAGAAGAGG
AGAACGGTATTGAGGGAGAGGTGGACAAGAAGTGGGTGCGTTTGTCTAGG
AAAGGAGAACCGATGCTCTGGATTCAGACGAATCGCTTGCTGGCTGTGTT
TTATGCAGAAGACTGCCTCTCTCCTTTCCTCCCTCAACACTTCGATCTTT
CGATTGAGGCATACCAGGTTTCGCTTCACCACGCCGCCCTTCTCTTGCAG
CGGGTCCCGAAGAAGCAGATTCCGGAAGTAAACAGTTTAATTAACACTTT
GCGGTTCGAGCTGGCGCGGGGGTATGCGCGGAGGAAGAAGGACGAGACGG
ATGAAATGGCATGTTTTACTTTGTTATCCCAAGCGGAAGCCGCGCTCTTG
CATACACAGAAGGAGGAACTGGGGAGGCTTTTGCATTTTGAAGGGACTCT
ATGGGAGGAGAAAGGGCGGAGGCAGAGGGGGAGGGAGGGGGGGGAGGAGG
AGCTGAGGAAGGCGGTGGGGACGTACGAAAAAGCCTTGGAAGCGTTCGAG
GGGGCGAGGACGGGAGGGAGGGAAGGAGGGGAGGAGGCGAAGGTGGCCCA
TTTGGTGGGGTTGTACAAGAGTATTGGGAGTATATACATGGCCTTGGTGG
AAAGAAGAGAGGAAGGGGAGGAGGGCCGGCCATCGGCGGCGGCGGCACCG
GCAGCCGAAGGAGAGGAACGCAGTAGCCCACCAGCAACGTCACCACGTAC
AACAAAAGCAGAAGCAGCAGTAACAGCAGCAACAGCAACAACAGCAGCAA
ATACACCACCTACACTTTCCCCCGCAGAGCAAGCGATTCGAAATGCCGAC
TTAGAGAAGGCCATAAATAAATTCACGCATGCCTATGCCCTCCTGAGTAA
ATACATGGAGGCGGGTGGCAAGACCTCGTTTGAGGCCGGGCAGGTTGCGT
TTGCGATTGGCGATCTGTACTTGAAGAGGAAGAAGGAGAAGAGGGCGAAG
AATCTCGAGAGTGGCATTGGCTGGTTTGAGAAAGCAGAGATGGGCATTAG
GAAAAGTGCCTCGGATCGGACGGATGCGGCGGGGAGGTACTTGCCGTTGT
ACACCCAGTTATGGGGGAAGTTGAGTGTGATGTGGCGGGAGAGAGCGGGG
CTGAGGAAGAAGGAAGGAGGGGGGGAGAAGAAGGTGAAGGAGGACTTGGA
GAAGAGCGAGAAGTACGGGCTGTTGTATCAGAATGCTCGGAGAAATTACG
AGAAGCGAACGGAGGCGTTGATGGCAGGGAAGATGGAGCAGTTGAATCTG
GGGGACGAAGGGAAGGAGAGGGGGGAGGGAGGGAAGAGGGAGGAGGGGGA
TTAAGAGAAGAGGTAGGAGCGTGTGGGTTTCGAATGATAGAATATCATAG
GAGAAGGCTGAGGAAGAAGTACCTAGGAACGTAGGGGTTTGTTTTGTTTT
GTGGTGATGCTTGCGTGGAGGTCGAAGTGCGGGAATATCAGCAGGATGCA
GAAGGAGATGATGATGTTCATGTGTTAGTGCGTACTATTAGAAGGAAAAC
TAATGGGAGTAGAGACAAGAAAACGGATATGAAAAATAGATGAGTATCAT
AAAGAGGGCGAAAGCGCCGCGCGAAACGAGAGTTGGTGAGTGGTGAGCTT
GATGTGTCACTAGATCAGATTTAGCTATCTACACCAGAAGCAAGATCGAG
AGACCCTGGCATTATGCGAATTTTAATTAAGCTCTTCAGCCGAGCAAGCT
AGAGGAAGAAAAAGCGAGATTTAAGAGAAAGGAAACTAAATTTAAAGACA
AAGACCACTGTGACAAGCATGCCAAAGCTGACAGCAAGAAAAGAATAGAA
TAAATAAGCGACCATAAAGAAAAACAACAGCCCCTAACCCTGCAAAAACA
AATATGGAAA
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protein sequence of NO09G03500.1

>NO09G03500.1-protein ID=NO09G03500.1-protein|Name=NO09G03500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1168bp
MPPKKGGAPGGADQVSKHKAAPGKVPLPPPPPPAAPASAKKTNGRNSNGG
GGVRETKAHPPPTPLATAGAPPAPAAPAKKEATALAAATKNKNKNKATSS
HTTSRKSFSDPVADWMHTGLLLQAVGKSPVLNKFITDLSKDYYGQVLLQV
HGSEDEDFKSVLVQHATNRCMAGAVGANTAGNYGSSKNSSSSSSKKVLTG
KTNGATAASSSSSNNRKNSSSVGSSTPLLTWSNTHTSLLKDPVNGAWEAC
KLYAPPLGPASLVSSINFSPEATDTYTKLHILANYKAFSPLLNLDVTSNA
ANLAQEWVSSMEWMKKEGRMKFDEALTTLTALLEGMAQVYPSVRHALPPT
LAALQAIKAAKEGGKEGGKDGGKEEGKKAALLTDDVVRELIQARLSPLLN
EGWAGGRAGSKARVHSAAAAVAALQTAMDGEGAEVGDVVRVLKKQGEEAI
VEEEKLEKHKEKEESQATTEAADGTAAAAAEKARSEEKSLEGDRDDKERW
EAHLKYHPGLREPVVAQVLGFRQHLKDGRARDIIREVLRTFQDHQRGTSP
LLPVEIHTLQENLAMAAVVLGNPTLALSAIQKALPGNASSSSSSSCSGSD
DSPSLPPCFSYCPSALRVKVLALESKGEEPKSKGVKEGGKERDLAAGHPT
YAALNALEGMKEGDTLKEDSARRVTYLTTLAVYLYHQLKRLGGGGEDGRE
GGVIQTAVKQGLGYLKEAVGMFGKEEGEEEGEEENGIEGEVDKKWVRLSR
KGEPMLWIQTNRLLAVFYAEDCLSPFLPQHFDLSIEAYQVSLHHAALLLQ
RVPKKQIPEVNSLINTLRFELARGYARRKKDETDEMACFTLLSQAEAALL
HTQKEELGRLLHFEGTLWEEKGRRQRGREGGEEELRKAVGTYEKALEAFE
GARTGGREGGEEAKVAHLVGLYKSIGSIYMALVERREEGEEGRPSAAAAP
AAEGEERSSPPATSPRTTKAEAAVTAATATTAANTPPTLSPAEQAIRNAD
LEKAINKFTHAYALLSKYMEAGGKTSFEAGQVAFAIGDLYLKRKKEKRAK
NLESGIGWFEKAEMGIRKSASDRTDAAGRYLPLYTQLWGKLSVMWRERAG
LRKKEGGGEKKVKEDLEKSEKYGLLYQNARRNYEKRTEALMAGKMEQLNL
GDEGKERGEGGKREEGD*
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Synonyms
Publications