NO09G03340, NO09G03340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03340 vs. NCBI_GenBank
Match: EWM27468.1 (dihydrolipoyllysine-residue acetyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 203.0 bits (515), Expect = 8.100e-49 Identity = 102/166 (61.45%), Postives = 122/166 (73.49%), Query Frame = 0 Query: 10 GRCACRRPPARPPPCFSSTRSSGPTPSSLLLVPLPKLAPHMTSGKVRWLKAEGEAFACYDIIAEVSTSTLVEEAYRDGKFKGEVTLLIEAQEDGYLARIFQHDHTNDIPVGTPVGVLCEEINELADTAAVAAVAQVGSALPKDLYSPEAQQKWRVWGGWQAYLKDG 176 GR +P AR S+G S+L+L+PLPKLAPHM SG++ WLKA GEAF CYDI+AEV+TSTLVEEA+R+G+F GEVTLL+EAQEDGYLA F D + +PVGT +G+LCEE EL +T AVA + V LPKDLY PE QQKWR+W GWQAYLK G Sbjct: 12 GRYTRHQPVARCVTSSGPQVSTGCISSNLVLIPLPKLAPHMKSGRINWLKAPGEAFLCYDIVAEVTTSTLVEEAHREGEFAGEVTLLLEAQEDGYLACTFHSDPSKTLPVGTLIGILCEEEAELPETMAVATASDV-KKLPKDLYDPEVQQKWRIWNGWQAYLKKG 176
BLAST of NO09G03340 vs. NCBI_GenBank
Match: GAX84838.1 (hypothetical protein CEUSTIGMA_g12259.t1 [Chlamydomonas eustigma]) HSP 1 Score: 95.9 bits (237), Expect = 1.400e-16 Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 0 Query: 26 SSTRSSGPTPSSLLLVPLPKLAPHMTSGK-VRWLKAEGEAFACYDIIAEVSTSTLVEEAYRDGKFKGEVTLLIEAQEDGYLARIFQHDHTNDIPVGTPVGVLCEEINEL 134 +S+ ++ P+ +S +V LPKL+ MT GK ++WLK+ G+ YD++ EV T LVE ++ G F GEVTLL+E+QE+GYLA I + +PVG PV VL E +L Sbjct: 67 ASSVAASPSTASHQIVTLPKLSHQMTQGKLIKWLKSPGDHIHMYDVLMEVETEELVENVFKVGDFAGEVTLLVESQEEGYLAEILVDAGPSLVPVGRPVAVLVESQEDL 175
BLAST of NO09G03340 vs. NCBI_GenBank
Match: XP_002945888.1 (hypothetical protein VOLCADRAFT_86312 [Volvox carteri f. nagariensis] >EFJ52883.1 hypothetical protein VOLCADRAFT_86312 [Volvox carteri f. nagariensis]) HSP 1 Score: 92.0 bits (227), Expect = 2.000e-15 Identity = 49/131 (37.40%), Postives = 80/131 (61.07%), Query Frame = 0 Query: 38 LLLVPLPKLAPHMTSGKV-RWLKAEGEAFACYDIIAEVSTSTLVEEAYRDGKFKGEVTLLIEAQEDGYLARIFQHDHTNDIPVGTPVGVLCEEINELADTAAVAAVAQVGS-----------ALPKDLYSP 157 ++++P+PKL+ MTSG++ +W EG + YD++ V T TLVEEAYR +F G+V LL+E+QE+G++AR+ + ++PVG P+ +LCE +E+ A A++G LP +Y+P Sbjct: 29 VIVLPMPKLSHAMTSGRIAKWHVEEGASVNTYDVLLTVETETLVEEAYRLDQFAGKVALLVESQEEGFVARLLAAE-GEEVPVGKPIALLCEREDEVPAARASIEWARLGDVYDSTCNPREVGLPGGVYTP 158
BLAST of NO09G03340 vs. NCBI_GenBank
Match: XP_013895221.1 (hypothetical protein MNEG_11761 [Monoraphidium neglectum] >KIY96201.1 hypothetical protein MNEG_11761 [Monoraphidium neglectum]) HSP 1 Score: 87.4 bits (215), Expect = 4.900e-14 Identity = 56/126 (44.44%), Postives = 71/126 (56.35%), Query Frame = 0 Query: 56 RWLKAEGEAFACYDIIAEVSTSTLVEEAYRDGKFKGEVTLLIEAQEDGYLARIFQHDHTNDIPVGTPVGVLCEEINELADTAAV----AAVAQVGSALPKDLYSPEAQQKWRVWGGWQAYLKDGGD 178 RWLKAEG+ YD++ EV T LVEEAYR G F G VTLLIE+QEDG LAR + +PVG P+ V+ EE A A+ + KD+Y E+Q RV WQ+YLK+ + Sbjct: 8 RWLKAEGKRVQQYDLLCEVDTQQLVEEAYRLGDFAGSVTLLIESQEDGVLARRLAPEGAT-LPVGAPIAVVWEESGXXXXXXXXXXXRLAAARRHTPPTKDVYD-ESQPSVRVL-EWQSYLKESSE 130
BLAST of NO09G03340 vs. NCBI_GenBank
Match: KXZ45833.1 (hypothetical protein GPECTOR_50g627 [Gonium pectorale]) HSP 1 Score: 84.3 bits (207), Expect = 4.200e-13 Identity = 52/134 (38.81%), Postives = 77/134 (57.46%), Query Frame = 0 Query: 50 MTSGKV-RWLKAEGEAFACYDIIAEVSTSTLVEEAYRDGKFKGEVTLLIEAQEDGYLARIFQHDHTNDIPVGTPVGVLCEEINELADTAAVAAVAQVGSA-LPKDLYSPEAQQKWRVWGGWQAYLKDGGDGGDC 182 MTSG++ +W EG A + YD++ V T +LVEEA++ +F G V LL+E+QE+G++A + + +++PVG PV VLCE + ELA A VGS L + + S R+ WQ+YL G C Sbjct: 1 MTSGRITKWHVTEGAAVSMYDVLMTVETESLVEEAFKVDQFAGTVALLVESQEEGFVAGLLAAE-GDEVPVGRPVAVLCERLEELA-----AVREAVGSGELLRGVDSVYESAPMRLL-EWQSYLAQGPKSSGC 127
BLAST of NO09G03340 vs. NCBI_GenBank
Match: XP_001697986.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 75.9 bits (185), Expect = 1.500e-10 Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 0 Query: 32 GPTPSS-LLLVPLPKLAPHMTSGKV-RWLKAEGEA-----------FACYDIIAEVSTSTLVEEAYRDGKFKGEVTLLIEAQEDGYLARIFQHDHTNDIPVGTPVGVLCEEINELADTAAVAAVAQVG 147 G P+ L+ +P+PKL+ MT G++ +W + ++ + YDI+ V T +LVEEAYR +F G V+LL+E+QE+ ++A + + ++ VG P+ VLCE+ + A + AA+A+ G Sbjct: 86 GSVPADRLIWLPMPKLSHEMTHGRIAKWHVGDSDSGSGADPGRPTHVSEYDILLTVDTDSLVEEAYRLDQFAGTVSLLVESQEEAHVAGLLVAE-GEEVEVGRPIAVLCEDPEDAAAVRSAAAIAETG 212
BLAST of NO09G03340 vs. NCBI_GenBank
Match: XP_009139473.1 (PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial isoform X1 [Brassica rapa]) HSP 1 Score: 74.7 bits (182), Expect = 3.300e-10 Identity = 44/136 (32.35%), Postives = 79/136 (58.09%), Query Frame = 0 Query: 30 SSGPTPSSLLLVPLPKLAPHMTSGKV-RWLKAEGEAFACYDIIAEVSTSTLVEEAYRDGKFKGEVTLLIEAQEDGYLARIFQHDHTNDIPVGTPVGVLCEEINELADTAAVAAVAQVG---SALPKDLYSPEAQQK 162 SSGPTP ++L +P L+P M+ G + +WLK EG+ D++ E+ T + T+ +E+QE+G+LA+I + + DIPV P+ ++ EE +++ + +AV QVG ++ P+++ S E+ Q+ Sbjct: 81 SSGPTPQTVL--TMPALSPTMSHGNIAKWLKKEGDKVEVGDVLCEIETD--------------KATVELESQEEGFLAKIVVTEGSKDIPVNAPIAIMVEEEDDIQNVSAVEG-GQVGKEETSAPQEMKSEESTQQ 199
BLAST of NO09G03340 vs. NCBI_GenBank
Match: XP_009139474.1 (PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial isoform X2 [Brassica rapa]) HSP 1 Score: 74.7 bits (182), Expect = 3.300e-10 Identity = 44/136 (32.35%), Postives = 79/136 (58.09%), Query Frame = 0 Query: 30 SSGPTPSSLLLVPLPKLAPHMTSGKV-RWLKAEGEAFACYDIIAEVSTSTLVEEAYRDGKFKGEVTLLIEAQEDGYLARIFQHDHTNDIPVGTPVGVLCEEINELADTAAVAAVAQVG---SALPKDLYSPEAQQK 162 SSGPTP ++L +P L+P M+ G + +WLK EG+ D++ E+ T + T+ +E+QE+G+LA+I + + DIPV P+ ++ EE +++ + +AV QVG ++ P+++ S E+ Q+ Sbjct: 79 SSGPTPQTVL--TMPALSPTMSHGNIAKWLKKEGDKVEVGDVLCEIETD--------------KATVELESQEEGFLAKIVVTEGSKDIPVNAPIAIMVEEEDDIQNVSAVEG-GQVGKEETSAPQEMKSEESTQQ 197
BLAST of NO09G03340 vs. NCBI_GenBank
Match: XP_003059500.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH56632.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 73.9 bits (180), Expect = 5.700e-10 Identity = 51/137 (37.23%), Postives = 66/137 (48.18%), Query Frame = 0 Query: 26 SSTRSSGPTPSSLLLVPLPKLAPHMTSGKV-RWLKAEGEAFACYDIIAEVSTSTLVEEAYRDGKFKGEVTLLIEAQEDGYLARIFQHDHTNDIPVGTPVGVLCEE---INELADTAAVAAVAQVGSALPKDLYSPEA 159 SS SS PS +VP P L+P MT G + W K EGE A DI+AE+ T + T+ +E+ EDG++A+I + D+PVG PV VLCEE + D A A A P D S A Sbjct: 61 SSAASSDDLPSH-QIVPFPSLSPTMTHGGIAAWKKKEGEFVAAGDILAEIQTD--------------KATMEMESMEDGWVAKILVAEGAEDVPVGKPVAVLCEEQDAVGAFKDYVPPAEDASPSGASPADAASASA 182
BLAST of NO09G03340 vs. NCBI_GenBank
Match: XP_013742727.1 (dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like [Brassica napus]) HSP 1 Score: 73.6 bits (179), Expect = 7.400e-10 Identity = 43/136 (31.62%), Postives = 79/136 (58.09%), Query Frame = 0 Query: 30 SSGPTPSSLLLVPLPKLAPHMTSGKV-RWLKAEGEAFACYDIIAEVSTSTLVEEAYRDGKFKGEVTLLIEAQEDGYLARIFQHDHTNDIPVGTPVGVLCEEINELADTAAVAAVAQVG---SALPKDLYSPEAQQK 162 S+GPTP ++L +P L+P M+ G + +WLK EG+ D++ E+ T + T+ +E+QE+G+LA+I + + DIPV P+ ++ EE +++ + +AV QVG ++ P+++ S E+ Q+ Sbjct: 81 STGPTPQTVL--TMPALSPTMSHGNIAKWLKKEGDKVEVGDVLCEIETD--------------KATVELESQEEGFLAKIVVTEGSKDIPVNAPIAIMVEEEDDIQNVSAVEG-GQVGKEETSAPQEMKSEESTQQ 199 The following BLAST results are available for this feature:
BLAST of NO09G03340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03340 ID=NO09G03340|Name=NO09G03340|organism=Nannochloropsis oceanica|type=gene|length=1371bpback to top protein sequence of NO09G03340.1 >NO09G03340.1-protein ID=NO09G03340.1-protein|Name=NO09G03340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=184bpback to top Synonyms
Publications
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