NO09G03310, NO09G03310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03310 vs. NCBI_GenBank
Match: ETM45383.1 (hypothetical protein L914_09543 [Phytophthora parasitica]) HSP 1 Score: 238.4 bits (607), Expect = 2.200e-59 Identity = 121/234 (51.71%), Postives = 154/234 (65.81%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWI-------------TDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESI 223 RY + G +LYRGL P L+ + PKAGIRFG+ + K+ L DENGK + +N AG+ AG+IE+ F TP+ET+KTKLI N G K I+AKEG+ G+YQGL ATI+KQ +NQGLRFM+F+E++ + N S +GGM+AG FS NNP DV+KTRMQGL A KY N LDC RQ+ EG G F G+VPRLGRV+PGQG+IFMS++SI Sbjct: 53 RYHIQTDGVGSLYRGLAPVLVGSIPKAGIRFGAFDFIKRRLEDENGKTSAMRNLAAGMMAGSIEATFTTTPIETLKTKLIGANAGMWEGTKMILAKEGIRGIYQGLWATILKQSTNQGLRFMWFSEFQKRVNPEFLERHGIISDAQNMTGSQRASLSLIGGMTAGIFSVFGNNPFDVVKTRMQGLQAQKYKNTLDCFRQMLLYEGVGSFYAGVVPRLGRVIPGQGVIFMSYDSI 286
BLAST of NO09G03310 vs. NCBI_GenBank
Match: KUF79519.1 (Tricarboxylate transport protein [Phytophthora nicotianae]) HSP 1 Score: 238.4 bits (607), Expect = 2.200e-59 Identity = 121/234 (51.71%), Postives = 154/234 (65.81%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWI-------------TDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESI 223 RY + G +LYRGL P L+ + PKAGIRFG+ + K+ L DENGK + +N AG+ AG+IE+ F TP+ET+KTKLI N G K I+AKEG+ G+YQGL ATI+KQ +NQGLRFM+F+E++ + N S +GGM+AG FS NNP DV+KTRMQGL A KY N LDC RQ+ EG G F G+VPRLGRV+PGQG+IFMS++SI Sbjct: 53 RYHIQTDGVGSLYRGLAPVLVGSIPKAGIRFGAFDFIKRXLEDENGKTSAMRNLAAGMMAGSIEATFTTTPIETLKTKLIGANAGMWEGTKMILAKEGIRGIYQGLWATILKQSTNQGLRFMWFSEFQKRVNPEFLERHGIISDAQNMTGSQRASLSLIGGMTAGIFSVFGNNPFDVVKTRMQGLQAQKYKNTLDCFRQMLLHEGVGSFYAGVVPRLGRVIPGQGVIFMSYDSI 286
BLAST of NO09G03310 vs. NCBI_GenBank
Match: XP_008880362.1 (hypothetical protein H310_14313 [Aphanomyces invadans] >ETV90973.1 hypothetical protein H310_14313 [Aphanomyces invadans]) HSP 1 Score: 237.7 bits (605), Expect = 3.700e-59 Identity = 120/239 (50.21%), Postives = 159/239 (66.53%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWI--------TDNGKVPLT--PITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESIQNKLVEVL 231 RY + G L+LYRGL P I++ PKAG+RFG+ K+ L D+ GK TP +N AG+ AG IE+I + TP ET+KTKLI N + GV+ I+ +EG+ G+YQGL AT+MKQ +N GLRF++F+EYK + D+ + T I SF+GGM+AG FST NNP DV+KT+MQGL +Y N LDCA + K +G F G+VPRLGRVVPGQGIIFMS+++I + L Sbjct: 90 RYHIQTGGALSLYRGLAPVFIASLPKAGLRFGAFDSIKQWLADDQGKSTPLRNMAAGMSAGAIEAILITTPTETIKTKLIDANTGVLYGVQTILQREGVRGLYQGLTATVMKQATNTGLRFLWFSEYKARVPGLLAQRGIDHNALTSTESAIVSFVGGMTAGIFSTFGNNPFDVVKTQMQGLQGTRYVNTLDCAMTILKRDGIAGFYAGVVPRLGRVVPGQGIIFMSYDTISTHVASFL 328
BLAST of NO09G03310 vs. NCBI_GenBank
Match: OQS01949.1 (tricarboxylate transporter [Thraustotheca clavata]) HSP 1 Score: 237.3 bits (604), Expect = 4.900e-59 Identity = 123/234 (52.56%), Postives = 154/234 (65.81%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWI-------------TDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESI 223 RY +AN G +ALYRGL P +I + PKAGIRFG Y K+ +G N AG+ AG+IE+ TP+ETVKTKLI N V GV++IV +EG+ G+YQGL ATIMKQ SN GLRFM+F EYK I D K L + S +GGM+AG FST NNP DV+KT+MQGL A+Y++ DCA+Q+ K EGF F G +PRLGRV+PGQG+IFMS++SI Sbjct: 55 RYHLANDGVIALYRGLMPVVIGSLPKAGIRFGVYDYLKRQFAGADGTTNAFGNLTAGIIAGSIEATLATTPIETVKTKLIDANCGMVRGVRNIVQQEGIRGLYQGLTATIMKQASNHGLRFMWFGEYKQRIPDFLESRGIVENYDDISKTQLA-LVSLVGGMTAGIFSTFGNNPFDVLKTKMQGLKGAQYASTWDCAKQIMKNEGFLGFYAGTIPRLGRVIPGQGVIFMSYDSI 287
BLAST of NO09G03310 vs. NCBI_GenBank
Match: ETL92084.1 (hypothetical protein L917_09504 [Phytophthora parasitica]) HSP 1 Score: 236.1 bits (601), Expect = 1.100e-58 Identity = 120/234 (51.28%), Postives = 153/234 (65.38%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWI-------------TDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESI 223 RY + G +LYRGL P L+ + PKAGIRFG+ + K+ L DENGK + +N AG+ AG+IE+ TP+ET+KTKLI N G K I+AKEG+ G+YQGL ATI+KQ +NQGLRFM+F+E++ + N S +GGM+AG FS NNP DV+KTRMQGL A KY N LDC RQ+ EG G F G+VPRLGRV+PGQG+IFMS++SI Sbjct: 53 RYHIQTDGVGSLYRGLAPVLVGSIPKAGIRFGAFDFIKRRLEDENGKTSAMRNLAAGMMAGSIEATLTTTPIETLKTKLIGANAGMWEGTKMILAKEGIRGIYQGLWATILKQSTNQGLRFMWFSEFQKRVNPEFLERHGIISDAQNMTGSQRASLSLIGGMTAGIFSVFGNNPFDVVKTRMQGLQAQKYKNTLDCFRQMLLHEGVGSFYAGVVPRLGRVIPGQGVIFMSYDSI 286
BLAST of NO09G03310 vs. NCBI_GenBank
Match: XP_012198393.1 (hypothetical protein SPRG_04591 [Saprolegnia parasitica CBS 223.65] >KDO30689.1 hypothetical protein SPRG_04591 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 232.3 bits (591), Expect = 1.600e-57 Identity = 119/231 (51.52%), Postives = 153/231 (66.23%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYK----NWITDNGKV------PLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESI 223 RY VA G +LYRGL P ++ + PKAGIRFG+ Y K+ D NG N AG+ AG+IE+ TP+ET+KTKLI N + GV+ I+A+EG G+YQGL ATI+KQ SNQGLRFM+F+EYK ++ G V S +GGMSAG FST NNP DV+KT+MQGL A+Y++ DCA+ + +TEG F G +PRLGRV+PGQGIIFMS++SI Sbjct: 53 RYHVATDGVGSLYRGLLPVVVGSLPKAGIRFGAYDYLKRQFADANGTTNAFGNLAAGMLAGSIEATVATTPIETLKTKLIDANAGMLHGVRRILAEEGARGLYQGLTATILKQASNQGLRFMWFSEYKVRVPGFLEQRGVVYSELSEAKLAAVSMVGGMSAGIFSTFGNNPFDVLKTKMQGLHGAQYASTWDCAKHIVRTEGLKGFYAGTIPRLGRVIPGQGIIFMSYDSI 283
BLAST of NO09G03310 vs. NCBI_GenBank
Match: OQR97791.1 (tricarboxylate transporter [Achlya hypogyna]) HSP 1 Score: 230.3 bits (586), Expect = 6.000e-57 Identity = 123/240 (51.25%), Postives = 157/240 (65.42%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWI---TDNGKVPLTPIT-------SFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESIQNKLVEVLL 232 RY VA G ALYRGL P +I + PKAGIRFG+ Y K+ ++G N AG+ AG IE+ TP+ETVKTKLI N + GV+ I+A+EG+ G+YQGL ATIMKQ SNQGLRFM+F EYK I + + + ++ S +GGM+AG FST NNP DV+KT+MQGL KY+N DCA+ + + EGF F G VPRLGRV+PGQG+IFMS++SI +LV L Sbjct: 55 RYHVAADGVGALYRGLLPVVIGSIPKAGIRFGAYDYLKRQFASKDGTTNALGNLGAGMLAGAIEATVATTPIETVKTKLIDANAGMIQGVRRIIAQEGIGGLYQGLTATIMKQASNQGLRFMWFAEYKARIPALLERRGIVYSELSEAQHAGVSMVGGMTAGIFSTFGNNPFDVLKTKMQGLGGTKYANTWDCAKHIMQREGFRGFYAGTVPRLGRVIPGQGVIFMSYDSI-TRLVSAYL 293
BLAST of NO09G03310 vs. NCBI_GenBank
Match: GAX92141.1 (tricarboxylate transporter, putative [Pythium insidiosum]) HSP 1 Score: 229.6 bits (584), Expect = 1.000e-56 Identity = 118/234 (50.43%), Postives = 155/234 (66.24%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWIT-------------DNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESI 223 +Y + G ++LYRGL P L+ + PKAGIRFG+ +FK +G+ TP +N AG+ AG IE+ + TP+ET+KTKLI N G K I+AKEG+ G+YQGL ATI+KQ SNQGLRFM+F EYK +T N + S +GG+SAG FS NNP DV+KTRMQGL AA+Y N LDC RQ+ + EG VF G+VPRLGRV+PGQG+IFM+++++ Sbjct: 18 QYHLRTGGPISLYRGLAPVLVGSIPKAGIRFGAFDFFKHRFAGAHGE-TPLRNLAAGMLAGAIEATLMTTPIETLKTKLISANAGVWQGTKMILAKEGIRGIYQGLFATILKQSSNQGLRFMWFTEYKRRVTPETLERYNIIRDAKNMTTTQHALYSLVGGVSAGIFSVFGNNPFDVVKTRMQGLQAAQYKNTLDCMRQMVRQEGPLVFYSGVVPRLGRVIPGQGVIFMTYDAV 250
BLAST of NO09G03310 vs. NCBI_GenBank
Match: XP_002896999.1 (tricarboxylate transporter, putative [Phytophthora infestans T30-4] >EEY66480.1 tricarboxylate transporter, putative [Phytophthora infestans T30-4]) HSP 1 Score: 228.8 bits (582), Expect = 1.700e-56 Identity = 121/240 (50.42%), Postives = 155/240 (64.58%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWIT-------------DNGKVPLTPITSFLGGMSAGCFSTLCNN------PLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESI 223 RY V G +LYRGL P L+ + PKAGIRFG Y K+ L DENGK + +N AG+ AG+IE+ TP+ET+KTKLI N G + I+AKEG+SG+YQGL ATI+KQ +NQGLRFM+F+E++ ++ N S +GGM+AG FS NN P DV+KTRMQGL+A KY + LDC RQ+ EG G F G+VPRLGRV+PGQG+IFMS++SI Sbjct: 53 RYHVQTDGVGSLYRGLAPVLLGSIPKAGIRFGVFDYIKQRLADENGKTSAMRNLAAGMIAGSIEATLATTPIETLKTKLIGANAGMWEGTRMILAKEGISGIYQGLWATILKQSTNQGLRFMWFSEFQKRVSPEFLERHGIITDAQNMTGSQRASLSLVGGMTAGIFSVFGNNRTFWRSPFDVVKTRMQGLEAQKYKSTLDCFRQMLFHEGVGSFYAGVVPRLGRVIPGQGVIFMSYDSI 292
BLAST of NO09G03310 vs. NCBI_GenBank
Match: XP_008607921.1 (hypothetical protein SDRG_04048 [Saprolegnia diclina VS20] >EQC38329.1 hypothetical protein SDRG_04048 [Saprolegnia diclina VS20]) HSP 1 Score: 228.4 bits (581), Expect = 2.300e-56 Identity = 119/241 (49.38%), Postives = 159/241 (65.98%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWI-----------TDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESIQNKLVEVLL 232 RY VA G +LYRGL P ++ + PK+GIRFG+ Y K+ D NG + N AG+ AG IE+ TP+ET+KTKLI N + GV+ I+A+EG G+YQGL ATI+KQ SNQGLRFM+F+EYK + ++ + L + S +GGMSAG FST NNP DV+KT+MQGL +Y++ DCA+ + +TEG F G +PRLGRV+PGQGIIFMS++SI ++LV L Sbjct: 106 RYHVATDGVGSLYRGLLPVVVGSLPKSGIRFGAYDYLKRQFADVNGTTSALGNLAAGMLAGAIEATVATTPIETLKTKLIDANAGMLHGVRRILAEEGARGLYQGLTATILKQASNQGLRFMWFSEYKVRVPGLLERHGVVYSELSEAKLAAV-SMVGGMSAGIFSTFGNNPFDVLKTKMQGLHGTQYASTWDCAKHIARTEGLKGFYAGTIPRLGRVIPGQGIIFMSYDSI-SRLVSTYL 344 The following BLAST results are available for this feature:
BLAST of NO09G03310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03310 ID=NO09G03310|Name=NO09G03310|organism=Nannochloropsis oceanica|type=gene|length=3864bpback to top protein sequence of NO09G03310.2 >NO09G03310.2-protein ID=NO09G03310.2-protein|Name=NO09G03310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=232bpback to top protein sequence of NO09G03310.1 >NO09G03310.1-protein ID=NO09G03310.1-protein|Name=NO09G03310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=307bpback to top Synonyms
Publications
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