NO09G03310, NO09G03310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03310 vs. NCBI_GenBank
Match: EWM27463.1 (mitochondrial tricarboxylate transport protein [Nannochloropsis gaditana]) HSP 1 Score: 422.5 bits (1085), Expect = 8.200e-115 Identity = 204/231 (88.31%), Postives = 218/231 (94.37%), Query Frame = 0 Query: 1 MRYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWITDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESIQNKLVEVLL 232 MRYTV NHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKK LMD+ GKLTPGKNFLAGVGAG IESIFVVTPVETVKTKLIHLNM F GGVKHIVA EG++GVYQGLGATIMKQGSNQGLRFMFFNEYKNW+T+NG+ LTP+TSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKY NALDCA+QL + EG GVFL+GL+PRLGRVVPGQGIIFMSFE+IQNKLV++LL Sbjct: 105 MRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETIQNKLVDILL 335
BLAST of NO09G03310 vs. NCBI_GenBank
Match: OEU07818.1 (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 310.1 bits (793), Expect = 5.900e-81 Identity = 145/226 (64.16%), Postives = 178/226 (78.76%), Query Frame = 0 Query: 1 MRYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWITDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESIQNKL 227 ++YT+ GF +LYRGL PTLI + PKAGIRFG N+ K+ L D++GKL GKNF+AG+GAG E++ +V PVETVKTK+I +NM F+ G+KHI+ EG GVYQG AT +KQGSNQGLRFM+FNEYKN +T+ G++PLTPI GGMSAGCFSTL NNP DV+KTRMQG +A++Y LDC +Q+ EGFG F G+VPRLGRVVPGQGIIFMSFESIQ+ L Sbjct: 55 LKYTIETTGFFSLYRGLAPTLIGSIPKAGIRFGLNSVIKEKLRDKDGKLGAGKNFVAGLGAGVSEALLIVAPVETVKTKVIEMNMPFLEGLKHIIKTEGFGGVYQGAFATALKQGSNQGLRFMWFNEYKNRVTNEGEIPLTPIMGLFGGMSAGCFSTLGNNPFDVVKTRMQGTNASQYKGTLDCFQQIISKEGFGAFYAGVVPRLGRVVPGQGIIFMSFESIQSWL 280
BLAST of NO09G03310 vs. NCBI_GenBank
Match: XP_002287803.1 (mitochondriale tricarboxylate carrier protein [Thalassiosira pseudonana CCMP1335] >EED95246.1 mitochondriale tricarboxylate carrier protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 302.4 bits (773), Expect = 1.200e-78 Identity = 143/226 (63.27%), Postives = 171/226 (75.66%), Query Frame = 0 Query: 1 MRYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWITDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESIQNKL 227 + Y + GF +LYRGL PTLI + PKAGIRFG NA K L D +GKLTPGKNF+AG+GAG E++ +V PVETVKTK I LNM FV G +HI+A EG+ GVYQG AT MKQGSNQGLRFM+FNEYK +TD+G+ LTP+ GGMSAGCFST+ NNP DV+KTRMQG +++Y+ LDC +Q+ EG G F G+VPRLGRVVPGQGIIFMSFE+I L Sbjct: 45 LSYYIRTTGFFSLYRGLAPTLIGSIPKAGIRFGLNARIKDRLRDSDGKLTPGKNFVAGLGAGVAEALIIVAPVETVKTKCIELNMPFVAGFRHILATEGMGGVYQGAAATAMKQGSNQGLRFMWFNEYKRIVTDDGEKKLTPLMGLFGGMSAGCFSTIGNNPFDVVKTRMQGTKSSQYAGTLDCFKQVFANEGIGAFYAGVVPRLGRVVPGQGIIFMSFETIVQNL 270
BLAST of NO09G03310 vs. NCBI_GenBank
Match: GAX17566.1 (solute carrier family 25 (mitochondrial citrate transporter), member 1 [Fistulifera solaris]) HSP 1 Score: 300.8 bits (769), Expect = 3.600e-78 Identity = 142/226 (62.83%), Postives = 170/226 (75.22%), Query Frame = 0 Query: 1 MRYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWITDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESIQNKL 227 + YTV GFL+LYRGL PTLI + PKAGIRFG N+ K+ L D NG LTP KNF+AG+GAG E++ +VTPVET+KT+ I N F G++ I+ KEG G+YQG AT +KQGSNQGLRFM+FNEYK +T++G P+TP+ LGGMSAGCFSTL NNP DVIKTRMQG +A +Y N LDC Q+ K EG G+VPRLGRVVPGQGIIFMSFE+IQN L Sbjct: 58 LAYTVRETGFLSLYRGLAPTLIGSIPKAGIRFGLNSIIKEQLRDTNGNLTPAKNFVAGLGAGVAEALIIVTPVETIKTRCIEKNQPFRAGMQEILRKEGWKGIYQGASATALKQGSNQGLRFMWFNEYKRIVTNDGTTPMTPLLGLLGGMSAGCFSTLGNNPFDVIKTRMQGTEARRYKNTLDCFLQILKNEGVAALYSGVVPRLGRVVPGQGIIFMSFETIQNTL 283
BLAST of NO09G03310 vs. NCBI_GenBank
Match: XP_002186029.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65499.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 295.4 bits (755), Expect = 1.500e-76 Identity = 142/225 (63.11%), Postives = 170/225 (75.56%), Query Frame = 0 Query: 3 YTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMD-ENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWITDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESIQNKL 227 YTV GF +LYRGL PTL+ + PKAGIRFG N+ K L D + G LTP KNF+AG+GAG E++ +V PVETVKTK I +NM F+ G +HI+ EGL+GVYQG AT +KQGSNQGLRFM+FNEYK +T +GK P+TP+ GGMSAGCFSTL NNP DV+KTRMQG AA+Y+ LDC +Q+ EG G G+VPRLGRVVPGQGIIFMSFE+IQN L Sbjct: 53 YTVNTTGFFSLYRGLAPTLLGSIPKAGIRFGLNSVIKDSLRDKDTGGLTPAKNFIAGLGAGVSEALLIVAPVETVKTKCIEMNMAFLQGFRHILKHEGLAGVYQGAAATALKQGSNQGLRFMWFNEYKVIVTKDGKEPMTPLLGLFGGMSAGCFSTLGNNPFDVVKTRMQGTKAAQYNGTLDCFKQIVSKEGVGALYAGVVPRLGRVVPGQGIIFMSFETIQNAL 277
BLAST of NO09G03310 vs. NCBI_GenBank
Match: CBJ48720.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 285.0 bits (728), Expect = 2.000e-73 Identity = 140/224 (62.50%), Postives = 172/224 (76.79%), Query Frame = 0 Query: 1 MRYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLM-DENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWITDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESIQ 224 + YTV GF +LYRGL PTL+ + PKAGIRFG N+ KK+L EN KL+ G+ FLAG GAG +E+IF VTP+ETVKTK I N F+ GV+ I+ EG +G+YQG+ ATI KQGSNQGLRFM+FN+YK ++D+G PL+ I + LGGMSAGCFSTL NNP DV+KTRMQG+DAAKY + +DC RQ+ K EG +G+VPRLGRVVPGQGIIFMS+E IQ Sbjct: 57 LTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKILAGKENKKLSSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIVSDDGARPLSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQIIKDEGAKGLYKGVVPRLGRVVPGQGIIFMSYERIQ 280
BLAST of NO09G03310 vs. NCBI_GenBank
Match: GAX18003.1 (hypothetical protein FisN_18Hh216 [Fistulifera solaris]) HSP 1 Score: 251.9 bits (642), Expect = 1.900e-63 Identity = 117/193 (60.62%), Postives = 144/193 (74.61%), Query Frame = 0 Query: 1 MRYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWITDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEG 194 + YTV GFL+LYRGL PTLI + PKAGIRFG N+ K+ L D NG LTP KNF+AG+GAG E++ +VTPVET+KT+ I N F G++ I+ KEG G+YQG AT +KQGSNQGLRFM+FNEYK +T +G P+TP+ LGGMSAGCFSTL NNP DVIKTRMQG +A +Y N LDC +Q+ + EG Sbjct: 57 LAYTVRETGFLSLYRGLAPTLIGSIPKAGIRFGLNSIIKEQLRDTNGNLTPAKNFVAGLGAGVAEALIIVTPVETIKTRCIEQNQPFRAGMQEILRKEGWKGIYQGASATALKQGSNQGLRFMWFNEYKRIVTKDGATPMTPLLGLLGGMSAGCFSTLGNNPFDVIKTRMQGTEARRYKNTLDCFQQILRHEG 249
BLAST of NO09G03310 vs. NCBI_GenBank
Match: GBG28276.1 (Tricarboxylate transport protein, mitochondrial [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 247.3 bits (630), Expect = 4.700e-62 Identity = 119/222 (53.60%), Postives = 156/222 (70.27%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWIT-DNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESI 223 R TVA +G LYRGL P +I + PKAGIRFG Y + L E+G +TP +N AG+ AG +E++ VTP+ET+KTKLIH N FV GV IV EG+ G+Y+G+ ATI KQ SNQGLRFM F +YK ++T D+ PL S +GGM +GCFST+CNNP D++K+RMQGL A+Y+ +DC R++ EG +G +PRL RVVPGQG+IFMS+E+I Sbjct: 52 RQTVAENGVKGLYRGLVPVVIGSIPKAGIRFGCFNYIQSQLRLEDGSITPLRNLAAGMSAGALEAVVAVTPIETMKTKLIHSNQGFVSGVMQIVRTEGVGGLYKGVWATIGKQSSNQGLRFMAFGQYKIFMTRDDPSRPLKAYESLIGGMMSGCFSTICNNPFDMVKSRMQGLHGAEYNGFIDCFRKVVSNEGILALWKGTLPRLSRVVPGQGVIFMSYETI 273
BLAST of NO09G03310 vs. NCBI_GenBank
Match: XP_009839525.1 (hypothetical protein H257_13640 [Aphanomyces astaci] >ETV70862.1 hypothetical protein H257_13640 [Aphanomyces astaci]) HSP 1 Score: 244.6 bits (623), Expect = 3.100e-61 Identity = 125/239 (52.30%), Postives = 164/239 (68.62%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWITD----NG--KVPLTP----ITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESIQNKLVEVL 231 RY + G L+LYRGL P L+ + PKAG+RFG+ K++L DE+G+ TP +N AG+ AG IE+I V TP ETVKTKLI N + G+K I+ +G+ G+YQGL ATIMKQ +N GLRFM+F+EYK + D NG L+P I SF+GGM+AG FST NNP DV+KT+MQGL+ A+Y N DCA + K +G F G+VPRLGRV+PGQGIIFMS+++I + + L Sbjct: 60 RYHIQTGGVLSLYRGLAPVLVGSLPKAGLRFGAFDSIKQLLADEHGQSTPLRNLAAGMSAGAIEAILVTTPTETVKTKLIDANAGMLHGIKRILETDGIRGLYQGLTATIMKQATNTGLRFMWFSEYKARVPDLLARNGVNYDTLSPGELAIVSFVGGMTAGIFSTFGNNPFDVVKTKMQGLEGARYPNTWDCAMTILKRDGVAGFYAGVVPRLGRVIPGQGIIFMSYDTISMHVAKYL 298
BLAST of NO09G03310 vs. NCBI_GenBank
Match: XP_008892909.1 (hypothetical protein PPTG_01385 [Phytophthora parasitica INRA-310] >ETI45572.1 hypothetical protein F443_09877 [Phytophthora parasitica P1569] >ETK85524.1 hypothetical protein L915_09675 [Phytophthora parasitica] >ETL38963.1 hypothetical protein L916_09579 [Phytophthora parasitica] >ETN21078.1 hypothetical protein PPTG_01385 [Phytophthora parasitica INRA-310] >ETO74216.1 hypothetical protein F444_09971 [Phytophthora parasitica P1976] >ETP15380.1 hypothetical protein F441_09827 [Phytophthora parasitica CJ01A1] >ETP43467.1 hypothetical protein F442_09782 [Phytophthora parasitica P10297]) HSP 1 Score: 238.4 bits (607), Expect = 2.200e-59 Identity = 121/234 (51.71%), Postives = 154/234 (65.81%), Query Frame = 0 Query: 2 RYTVANHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKMLMDENGKLTPGKNFLAGVGAGTIESIFVVTPVETVKTKLIHLNMEFVGGVKHIVAKEGLSGVYQGLGATIMKQGSNQGLRFMFFNEYKNWI-------------TDNGKVPLTPITSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYSNALDCARQLTKTEGFGVFLRGLVPRLGRVVPGQGIIFMSFESI 223 RY + G +LYRGL P L+ + PKAGIRFG+ + K+ L DENGK + +N AG+ AG+IE+ F TP+ET+KTKLI N G K I+AKEG+ G+YQGL ATI+KQ +NQGLRFM+F+E++ + N S +GGM+AG FS NNP DV+KTRMQGL A KY N LDC RQ+ EG G F G+VPRLGRV+PGQG+IFMS++SI Sbjct: 53 RYHIQTDGVGSLYRGLAPVLVGSIPKAGIRFGAFDFIKRRLEDENGKTSAMRNLAAGMMAGSIEATFTTTPIETLKTKLIGANAGMWEGTKMILAKEGIRGIYQGLWATILKQSTNQGLRFMWFSEFQKRVNPEFLERHGIISDAQNMTGSQRASLSLIGGMTAGIFSVFGNNPFDVVKTRMQGLQAQKYKNTLDCFRQMLLHEGVGSFYAGVVPRLGRVIPGQGVIFMSYDSI 286 The following BLAST results are available for this feature:
BLAST of NO09G03310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03310 ID=NO09G03310|Name=NO09G03310|organism=Nannochloropsis oceanica|type=gene|length=3864bpback to top protein sequence of NO09G03310.2 >NO09G03310.2-protein ID=NO09G03310.2-protein|Name=NO09G03310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=232bpback to top protein sequence of NO09G03310.1 >NO09G03310.1-protein ID=NO09G03310.1-protein|Name=NO09G03310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=307bpback to top Synonyms
Publications
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