NO09G03300, NO09G03300 (gene) Nannochloropsis oceanica

Overview
NameNO09G03300
Unique NameNO09G03300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1863
Alignment locationchr9:948778..950640 +

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Properties
Property NameValue
DescriptionProtein phosphatase 2c ptc1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:948778..950640 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0006470protein dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036457PPM-type_dom_sf
IPR015655PP2C
IPR001932PPM-type_phosphatase_dom
Homology
BLAST of NO09G03300 vs. NCBI_GenBank
Match: XP_009041078.1 (hypothetical protein AURANDRAFT_67405 [Aureococcus anophagefferens] >EGB04227.1 hypothetical protein AURANDRAFT_67405 [Aureococcus anophagefferens])

HSP 1 Score: 98.2 bits (243), Expect = 9.500e-17
Identity = 63/138 (45.65%), Postives = 79/138 (57.25%), Query Frame = 0
Query:  480 TWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLI------LASDGVWDVVDNQEAVKVV-GHFIS---------VSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNL 602
            +WR  + GLAMSRSFGDS VH  G S EPE+ ++R+         E D FLI       A+DGVWDV+DN +A ++V  H  S           T     GEWD  EAA  L   AR+RW+ +SP MIDDIT +VV+L
Sbjct:   23 SWR--QMGLAMSRSFGDSIVHGLGVSCEPEITDHRID--------ESDAFLIWLESIYSATDGVWDVIDNNQAAQIVHSHLTSRYARPLSQPQHTTDCRSGEWDPSEAAHMLCMSARRRWESLSP-MIDDITALVVDL 149          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: XP_013233526.1 (protein phosphatase 2C, putative [Eimeria tenella] >CDJ42776.1 protein phosphatase 2C, putative [Eimeria tenella])

HSP 1 Score: 97.4 bits (241), Expect = 1.600e-16
Identity = 108/392 (27.55%), Postives = 138/392 (35.20%), Query Frame = 0
Query:  217 AVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDP-------LPAFRLMQNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTD--WRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVV 600
            +VLDGHG  GHLVS  V Q LP  LV   + P       L A  L  N  +    +D+ CSG+TCV+ + R               L V N+GDSR +LGR    +  W                                                                              A+PLT DHKP+   E +RI A GG++   Q                                                GP R+W     D  GLAMSRS GD+     G  ++PEV  + V         E D  L+LASDGVW+ + N+EA+K V  F  V  G   GG         ALV  ARK+W+      IDDIT ++V
Sbjct:  137 SVLDGHGPSGHLVSAFVNQRLPR-LVGESWRPQGDLQKALSAGFLAANQELKRGNIDILCSGTTCVVCVLRE------------RTLYVANVGDSRAILGRGPSPEGPWT-----------------------------------------------------------------------------AVPLTTDHKPELETERQRIVAAGGRIAPLQ-----------------------------------------EEDGSPCGPLRVWLR-TDDVPGLAMSRSLGDTLASNVGVVAQPEVGTFSVG--------EGDRCLLLASDGVWEFLSNEEALKTVKPF--VLKGDPAGG-------CSALVNKARKKWEE-EDGAIDDITALLV 378          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: PHJ19763.1 (protein phosphatase 2c containing protein [Cystoisospora suis])

HSP 1 Score: 97.1 bits (240), Expect = 2.100e-16
Identity = 105/401 (26.18%), Postives = 144/401 (35.91%), Query Frame = 0
Query:  216 YAVLDGHGEQGHLVSQRVRQHLPHYLVQ-TQFD-----PLPAFRLMQNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKE---AAIALVRIARKRWKRVSPQMIDDITCIVVNLQVKDKN 608
            ++V+DGHG  GH VS  VR+ LP  + +  +F+      L       N  V    +DV  SG+TC+  +             +G  L   N+GDSR ++ R                                                                        N+GR S      A  L+ DHKPDRPDE +RI A  G+VG                                                  LGP R+W     D  GLAMSRS GDS   + G + EPE+           G    D F++LASDGVW+ + N+E V++V  F            W+AK+   A  AL+  A +RW R    +IDD T +VV L V  ++
Sbjct:   39 FSVMDGHGVNGHQVSDVVRRALPKNVQECPEFNKDMKQALEKGFFRTNCEVFQRGMDVMMSGTTCIACVV------------QGTTLYTANVGDSRAIMAR------------------------------------------------------------------------NNGRGSWT----AFALSQDHKPDRPDEEKRILANDGRVG-----------------------------------------ALKGPNGEPLGPPRVWRK-DCDAPGLAMSRSLGDSLAASVGVTGEPEIFV--------TGLTPNDDFIVLASDGVWEFMSNEEVVEIVSRF------------WEAKDPLGACDALIEEATRRW-RQEDDVIDDTTALVVFLDVGSRH 288          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: CDW78154.1 (protein phosphatase 2c containing protein [Stylonychia lemnae])

HSP 1 Score: 96.7 bits (239), Expect = 2.800e-16
Identity = 66/213 (30.99%), Postives = 101/213 (47.42%), Query Frame = 0
Query:  393 IYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVV-GHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNLQVK 605
            I   PL  DHK   PDE +RI   GG++   +    P+                                         LGP R+W+    +  GLAMSRSFGD A    G  +EPE++E  +        +E+D F+++ASDGVW+ + N E V+++  H+ + S          A++AA AL+R + KRWK+    ++DDITCI++ L ++
Sbjct:  942 ISGFPLNRDHKASEPDEEKRILNAGGRI---ESFKDPS--------------------------------------GRQLGPLRVWH-MHENIPGLAMSRSFGDHAAAEVGVIAEPEILEMNL--------IEDDKFIVIASDGVWEFLSNDEVVRIIYPHYKNNS----------AEKAAEALIRESLKRWKQ-EENVVDDITCIIIFLSIQ 1093          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: XP_001434013.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK66616.1 unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 96.3 bits (238), Expect = 3.600e-16
Identity = 67/214 (31.31%), Postives = 99/214 (46.26%), Query Frame = 0
Query:  386 RSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVV 600
            R  SN    AI L+NDHKPD P E RRI   GG+V    YI +                                          +LGPAR+W     D  GLAMSRSFGD    + G   EPE++ Y+++        E D+F++LASDGVW+ + N++ + ++  + +   G           A + +V+ + K WK ++  +IDDIT ++V
Sbjct:  285 RQQSNGSRSAISLSNDHKPDLPQEKRRIEQKGGRV--EPYIDF---------------------------------------DGSSLGPARVWLKTE-DIPGLAMSRSFGDKVAASCGVICEPEILAYKMQ--------EGDLFMVLASDGVWEFLSNEQVIDMIYPYYAQDEG---------NAACVRIVKESIKLWK-LNDTVIDDITVVIV 438          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: XP_001434563.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK67166.1 unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 96.3 bits (238), Expect = 3.600e-16
Identity = 105/441 (23.81%), Postives = 155/441 (35.15%), Query Frame = 0
Query:  167 TAQGLKSSHANWINQDNFILLDAEQQQQTSHSVSLPSSSLLPSSHPVSIYAVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDP-------LPAFRLMQNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVG-HFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVV 600
            T QG  +S+ N  NQD FI                  ++++   H   +++V DGHG+ GH VSQ VR H    L              + +  L+ N +   P  D   SG+T   +I ++           G  L   N+GDSR ++                                                                            G+  +N++    PL+ DHKP    E+ RI   GG+V                                                  ++GPAR+W    G+  GLAMSRS GD    + G SS PE+ EY++          +D F+IL SDGVW+ +DNQ  V +VG H+I          + D + A   L++I+ K W      ++DDIT IV+
Sbjct:  201 TRQGQLASNPNKTNQDTFIC----------------ETNIVSDMH---LFSVCDGHGQNGHFVSQYVRDHFTKILXXXXXXKQHPRQAIVKSISLLANLINQQP-FDTQFSGTTMNSIIIQD-----------GGHLICSNVGDSRAII----------------------------------------------------------------------------GKLGNNQKFKPFPLSIDHKPCLEKEMNRIHMHGGRV-----------------------------------------DTYYDDQGNSIGPARVWVR-DGNYPGLAMSRSLGDQIAQSVGVSSVPEIFEYQL--------TPQDKFIILGSDGVWEFIDNQSVVDIVGKHYI----------QGDLEGACDELMQISYKMWTLEDDSVVDDITLIVI 474          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: XP_013436141.1 (protein phosphatase 2C, putative [Eimeria necatrix] >CDJ67674.1 protein phosphatase 2C, putative [Eimeria necatrix])

HSP 1 Score: 95.9 bits (237), Expect = 4.700e-16
Identity = 107/392 (27.30%), Postives = 139/392 (35.46%), Query Frame = 0
Query:  217 AVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDP-------LPAFRLMQNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTD--WRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVV 600
            +VLDGHG  GHLVS  V + LP  LV   + P       L A  L  N+ +    +D+ CSG+TCV  + +               L V N+GDSR +LGR    +  W                                                                              A+PLT DHKP+   E +RI A GG++   Q                                                GP R+W     D  GLAMSRS GDS     G  ++PEV  + +R        E D  L+LASDGVW+ + N+EA+K V  F  V  G   GG         ALV  ARK+W+      IDDIT ++V
Sbjct:  137 SVLDGHGPSGHLVSGFVNRRLPR-LVGESWGPQGGLQKALFAGYLAANEELKKGNIDIFCSGTTCVACVLQE------------RTLYVANVGDSRAILGRGPSPEGPWT-----------------------------------------------------------------------------AVPLTTDHKPELETERKRILAAGGRIAPLQ-----------------------------------------EEDGSPCGPLRVWLP-TDDVPGLAMSRSLGDSLAANVGVVAQPEVGTFSLR--------EGDRCLLLASDGVWEFLSNEEALKTVKPF--VLKGDPAGG-------CTALVNKARKKWEE-EDGAIDDITALLV 378          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: CEO99367.1 (hypothetical protein PBRA_001274 [Plasmodiophora brassicae])

HSP 1 Score: 95.9 bits (237), Expect = 4.700e-16
Identity = 74/218 (33.94%), Postives = 100/218 (45.87%), Query Frame = 0
Query:  385 GRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQV-GYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNL 602
            GR ++   + AIPL+ DHKPDR DE  RI    G+V   R  +  P                                          +GPAR+W  +  D  GLAM+RSFGD+   + G  +EPEV      E  RD   E D FL++A+DGVW+ +D+Q+AV +V    +            A EA  AL+  + KRWK     +IDDIT +VV L
Sbjct:  179 GRGTAEGSVVAIPLSVDHKPDRADEKERIVRNRGRVQPCRGPLGEP------------------------------------------VGPARVW-LYHQDIPGLAMTRSFGDTVAKSIGVIAEPEVT-----ETARD---EADRFLVIATDGVWEFIDSQQAVDIVARCAT------------AGEACRALLEESTKRWK-AEEDVIDDITVVVVTL 332          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: PFH38758.1 (protein phosphatase 2c containing protein [Besnoitia besnoiti])

HSP 1 Score: 95.9 bits (237), Expect = 4.700e-16
Identity = 104/403 (25.81%), Postives = 149/403 (36.97%), Query Frame = 0
Query:  219 LDGHGEQGHLVSQRVRQHLPHYLVQ--TQFD-----PLPAFRLMQNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNLQVKDKNEEGEGRR 615
            +DGHG  GHLVS  VR H+ H  VQ   +F+      L       N  +  P +D+  SG+TCV  +             +G +L   N+GDSR ++GR                                                                         +G+        ++ L++DHKPDRPDE +RI A  G+VG  +  +  A                                         LGPAR+W     D  GLAMSRS GDS   + G   EPE+    +          +D F+++ASDG+W+ + NQE V+VV  F+            D   A   L+  A +RWK +   ++DD T +V+ L V  K   G+ RR
Sbjct:    1 MDGHGMNGHLVSDAVR-HILHKNVQECPEFNKDLKQALQKGFFRTNCELFQPGIDITMSGTTCVSCVI------------QGTMLYTANVGDSRAIMGRA------------------------------------------------------------------------NGKGGWT----SLSLSHDHKPDRPDEEKRILAADGRVGALKGPNGEA-----------------------------------------LGPARVWRK-DCDAPGLAMSRSLGDSLAASVGVIGEPEITITPL--------TPQDEFIVIASDGLWEFITNQEVVEVVSRFLD---------SRDPVGACDTLIEEANRRWK-LEDDVVDDTTVVVIFLDVPRKG-LGDKRR 253          
BLAST of NO09G03300 vs. NCBI_GenBank
Match: XP_003879578.1 (hypothetical protein NCLIV_000410 [Neospora caninum Liverpool] >CBZ49543.1 hypothetical protein NCLIV_000410 [Neospora caninum Liverpool] >CEL64122.1 TPA: protein phosphatase 2c containing protein [Neospora caninum Liverpool])

HSP 1 Score: 95.5 bits (236), Expect = 6.100e-16
Identity = 99/410 (24.15%), Postives = 144/410 (35.12%), Query Frame = 0
Query:  216 YAVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDPLPAFR-----------LMQNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVNLGDSRCVLGRRKMTDWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHTNNIHINSGRSSSNRRIYAIPLTNDHKPDRPDELRRIAAIGGQVGYRQYISYPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITLGPARIWYTWRGDRNGLAMSRSFGDSAVHAAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVVGHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVNLQVKDKNEEGEGRR 615
            ++V+DGHG  GHLVS  VRQ     ++       PAF               N  +  P +D+  SG+TCV  +              G  L   N+GDSR ++                                                                            GRS+      ++ L++DHKPDRPDE +RI A  G+V                                                   LGPAR+W     D  GLAMSRS GDS   + G   EPE++   +          +D F+++ASDG+W+ + N+E  ++V  F+            D   A  AL+  + +RW R+   +IDD T +V+ L V  + + GE RR
Sbjct:  115 FSVMDGHGMNGHLVSDVVRQ-----ILYKNVQECPAFNRDLKQALQKGFFRTNCELFQPGIDITMSGTTCVACVL------------HGTTLYSANVGDSRAIM----------------------------------------------------------------------------GRSNGKGGWTSLSLSHDHKPDRPDEEKRILAAEGRVA-----------------------------------------ALKGPNGEPLGPARVWRK-DCDAPGLAMSRSLGDSLAASVGVIGEPEILVASL--------TPQDDFIVIASDGLWEFMTNEEVAQIVSRFLESK---------DPMGACDALIEESNRRW-RLEDDVIDDTTVVVIFLDV-GRKDAGEKRR 370          
The following BLAST results are available for this feature:
BLAST of NO09G03300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009041078.19.500e-1745.65hypothetical protein AURANDRAFT_67405 [Aureococcus... [more]
XP_013233526.11.600e-1627.55protein phosphatase 2C, putative [Eimeria tenella]... [more]
PHJ19763.12.100e-1626.18protein phosphatase 2c containing protein [Cystois... [more]
CDW78154.12.800e-1630.99protein phosphatase 2c containing protein [Stylony... [more]
XP_001434013.13.600e-1631.31hypothetical protein [Paramecium tetraurelia strai... [more]
XP_001434563.13.600e-1623.81hypothetical protein [Paramecium tetraurelia strai... [more]
XP_013436141.14.700e-1627.30protein phosphatase 2C, putative [Eimeria necatrix... [more]
CEO99367.14.700e-1633.94hypothetical protein PBRA_001274 [Plasmodiophora b... [more]
PFH38758.14.700e-1625.81protein phosphatase 2c containing protein [Besnoit... [more]
XP_003879578.16.100e-1624.15hypothetical protein NCLIV_000410 [Neospora caninu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03300.1NO09G03300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|527976gene_4215Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03300.1NO09G03300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03300 ID=NO09G03300|Name=NO09G03300|organism=Nannochloropsis oceanica|type=gene|length=1863bp
ATGACGGAGGGAGGAAAGGTGGTGGAAGAGATAGACGAGAAAATGGATGA
GGACAGGCAGACTGATAGGTCAGGCATTGATAATGAGGAACAACAGCAAC
ACCATCAGCAGCAGCACCAGCAGCAGCACCAGCAGCAGCAGCAACACCAG
CAGCAGCAGCATTATCCCTACGTAGCGTCATCGCAACAGCACATCAGCAG
CAGTACAAGCACCACCGACACAACCAGCAGCACGAGTATCACAGAAGGGA
TGGCTCACCATAAAATGGGCCACGGATCCAAGCGCCTGGACATATCCTGG
CAAGCTGCTGCCCGGCTAATCGCTCCTGGCCCTACCCCTCGTGTCCACGT
CCGGGGCTCTCGTGGAGCTCACTCCATCTCCATGGGGAGTGTCGATTTGC
TCGCCCGCCCTCTCTTCACACCGAGATCGGCCTTTCTCCAGCACGTACAC
GACCCGGAGGATTGCTACTCCCTCTCGGGATCAGTGAGTGGGATGTGCAC
TGCTCAAGGGCTCAAGTCATCACATGCCAACTGGATCAACCAAGATAATT
TCATCCTCCTCGACGCAGAGCAGCAGCAGCAGACTTCGCACTCTGTTTCC
TTGCCTTCTTCGTCGTTGTTGCCGTCTTCCCATCCCGTGTCAATTTATGC
AGTTTTGGACGGGCACGGCGAGCAGGGGCATCTGGTCAGCCAGCGCGTGA
GGCAGCACCTCCCGCATTATCTCGTCCAGACACAGTTTGACCCCCTTCCG
GCGTTTCGATTGATGCAGAACGACCTGGTCATGTGTCCCTTACTCGACGT
GGCGTGCTCTGGGTCCACGTGCGTGATGGTCATAGCGCGCAACGTGGAGG
GAGAGGGGAAGGGAGGGAGTGAGAGAGGGATGATATTGACAGTGGTAAAT
TTGGGGGACTCCCGGTGTGTGTTGGGAAGAAGAAAGATGACAGATTGGCG
GCGGCAGCAGCAGCAGCAGCAGCAGCAGCCTTGGGGACAGAATGAGGGAG
AGGGGCAGGATCAGAAGCAGCAAGAGGAGAAGCGAGAGGGGAAAGAGCAG
TCAGATGAAAGCCTCGTCAGTTATCACCTTCAATCATCATCCTCTCCCTC
TCCCTCCGCCTCTCCCTACGACCACCACACCAACAATATTCATATCAACA
GCGGCAGGAGTAGCAGTAATAGGCGCATCTACGCCATCCCCCTCACCAAC
GATCATAAGCCCGACCGTCCAGATGAACTCCGCCGAATTGCCGCCATAGG
TGGTCAAGTCGGATATCGTCAATACATCTCATACCCCGCTATCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTCCTCTTCCTCCACCTCC
TCCTCCTCCTCCTTCAACCATAATCGCTCCTCCACGCACCCTCTTCCCAC
TCCTTCCATTACCTTGGGGCCGGCGCGGATATGGTACACATGGCGAGGGG
ATCGGAACGGGCTGGCGATGAGTCGCTCCTTCGGGGACAGCGCCGTGCAC
GCGGCCGGTGGCAGTAGCGAGCCAGAGGTGGTGGAATATCGAGTGAGGGA
AAGAGGGAGGGATGGCGAGGTAGAGGAAGATATGTTCTTGATCTTGGCGA
GCGACGGGGTGTGGGATGTGGTTGACAATCAGGAGGCTGTTAAGGTAGTG
GGGCACTTTATCAGTGTATCGACGGGAGGGAGGGAGGGAGGGGAGTGGGA
TGCAAAGGAGGCGGCGATAGCTTTGGTGAGAATTGCGAGGAAACGGTGGA
AGAGGGTGTCGCCGCAAATGATCGACGATATCACTTGTATCGTTGTAAAC
CTCCAAGTAAAGGATAAAAACGAGGAAGGGGAGGGGAGGAGATTCATAGG
TAGCAGAGAATGA
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protein sequence of NO09G03300.1

>NO09G03300.1-protein ID=NO09G03300.1-protein|Name=NO09G03300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=621bp
MTEGGKVVEEIDEKMDEDRQTDRSGIDNEEQQQHHQQQHQQQHQQQQQHQ
QQQHYPYVASSQQHISSSTSTTDTTSSTSITEGMAHHKMGHGSKRLDISW
QAAARLIAPGPTPRVHVRGSRGAHSISMGSVDLLARPLFTPRSAFLQHVH
DPEDCYSLSGSVSGMCTAQGLKSSHANWINQDNFILLDAEQQQQTSHSVS
LPSSSLLPSSHPVSIYAVLDGHGEQGHLVSQRVRQHLPHYLVQTQFDPLP
AFRLMQNDLVMCPLLDVACSGSTCVMVIARNVEGEGKGGSERGMILTVVN
LGDSRCVLGRRKMTDWRRQQQQQQQQPWGQNEGEGQDQKQQEEKREGKEQ
SDESLVSYHLQSSSSPSPSASPYDHHTNNIHINSGRSSSNRRIYAIPLTN
DHKPDRPDELRRIAAIGGQVGYRQYISYPAISSSSSSSSSSSSTSSSSTS
SSSSFNHNRSSTHPLPTPSITLGPARIWYTWRGDRNGLAMSRSFGDSAVH
AAGGSSEPEVVEYRVRERGRDGEVEEDMFLILASDGVWDVVDNQEAVKVV
GHFISVSTGGREGGEWDAKEAAIALVRIARKRWKRVSPQMIDDITCIVVN
LQVKDKNEEGEGRRFIGSRE*
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Synonyms
Publications