NO09G03030, NO09G03030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03030 vs. NCBI_GenBank
Match: KUF77866.1 (RER1 protein [Phytophthora nicotianae] >KUF98052.1 RER1 protein [Phytophthora nicotianae]) HSP 1 Score: 220.7 bits (561), Expect = 3.700e-54 Identity = 106/168 (63.10%), Postives = 133/168 (79.17%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAG 175 +P F+ +V+VS++RKWQ++LD+ST++V RW + + +L LY +RVFY+N + IVTYGLGIYLLN FIGFLSPQMD ES+GPLLP + EE+RPF RR+PEF+FWY KAT V+ MT FDVPV+WPILL+YFI LF LTMKRQI+HM KH YVPW +GK Y G Sbjct: 605 EPPFIARVSVSIKRKWQYLLDKSTIHVYGRWGVALGLLALYLVRVFYLNAFHIVTYGLGIYLLNLFIGFLSPQMDMESDGPLLPHKQSEEFRPFTRRVPEFQFWYSTFKATIVSLLMTLSSAFDVPVFWPILLIYFIVLFALTMKRQIKHMWKHNYVPWDHGKQVYKG 772
BLAST of NO09G03030 vs. NCBI_GenBank
Match: XP_024582120.1 (protein rer1a [Plasmopara halstedii] >CEG45751.1 protein rer1a [Plasmopara halstedii]) HSP 1 Score: 219.9 bits (559), Expect = 6.400e-54 Identity = 106/168 (63.10%), Postives = 132/168 (78.57%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAG 175 +P F+ +V+VS++RKWQH+LD+ST+YV RW + + +L LY +RVFY+N + IVTYGLGIYLLN FIGFLSPQ+D E +GPLLP + EE+RPF RR+PEF FWY KAT V+ MT FDVPV+WPILL+YFI LF LTMKRQI+HM KH YVPW++GK Y G Sbjct: 519 EPPFIARVSVSIKRKWQHLLDKSTIYVYGRWSVALGLLLLYLVRVFYLNAFHIVTYGLGIYLLNLFIGFLSPQVDAEIDGPLLPHKQSEEFRPFTRRVPEFHFWYSTFKATVVSLLMTLSSAFDVPVFWPILLIYFIVLFALTMKRQIKHMWKHNYVPWNHGKQVYKG 686
BLAST of NO09G03030 vs. NCBI_GenBank
Match: XP_009534178.1 (hypothetical protein PHYSODRAFT_518489 [Phytophthora sojae] >EGZ11433.1 hypothetical protein PHYSODRAFT_518489 [Phytophthora sojae]) HSP 1 Score: 219.5 bits (558), Expect = 8.300e-54 Identity = 105/168 (62.50%), Postives = 132/168 (78.57%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAG 175 +P F+ +V+VS++RKWQ++LD+ST++V RW + + +L LY +RVFY+N + IVTYGLGIYLLN FIGFLSPQ+D ESEGPLLP + EE+RPF RR+PEF+FWY KA V+ MT FDVPV+WPILL+YFI LF LTMKRQI+HM KH YVPW +GK Y G Sbjct: 11 EPPFIARVSVSIKRKWQYLLDKSTIHVYARWGVALGLLALYLVRVFYLNAFHIVTYGLGIYLLNLFIGFLSPQVDMESEGPLLPHKQSEEFRPFTRRVPEFQFWYSTFKAAIVSLLMTLSSAFDVPVFWPILLIYFIVLFALTMKRQIKHMWKHNYVPWDHGKQVYKG 178
BLAST of NO09G03030 vs. NCBI_GenBank
Match: OWY96674.1 (Protein RER1A [Phytophthora megakarya]) HSP 1 Score: 218.8 bits (556), Expect = 1.400e-53 Identity = 105/168 (62.50%), Postives = 132/168 (78.57%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAG 175 +P F+ +V+VS++RKWQ++LD+ST++V RW + + +L LY +RVFY+N + IVTYGLGIYLLN FIGFLSPQ+D ESEGPLLP + EE+RPF RR+PEF+FWY KA V+ MT FDVPV+WPILL+YFI LF LTMKRQI+HM KH YVPW +GK Y G Sbjct: 11 EPPFIARVSVSIKRKWQYMLDKSTIHVYARWGVAIGLLLLYLVRVFYLNAFHIVTYGLGIYLLNLFIGFLSPQVDMESEGPLLPHKQSEEFRPFTRRVPEFQFWYSTFKAALVSLLMTLSSAFDVPVFWPILLIYFIVLFALTMKRQIKHMWKHNYVPWDHGKQVYKG 178
BLAST of NO09G03030 vs. NCBI_GenBank
Match: CBN76594.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 217.2 bits (552), Expect = 4.100e-53 Identity = 104/174 (59.77%), Postives = 133/174 (76.44%), Query Frame = 0 Query: 2 MESDGDPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGG 176 ME G S ++ + ++R +Q+ LDRS +Y RW +F V + L+ LR++ + GWFIVTYGLGI+LLNN IGFLSPQ+DPESEGP LPT+ +E+RPF+RRLPEF+FW K +AFGMTFF FD+PV+WPILL+YFI L LTMKRQ++HMIKH+YVPW+ GKA Y GG Sbjct: 1 MEDPGS-SKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGG 173
BLAST of NO09G03030 vs. NCBI_GenBank
Match: GBG30379.1 (Protein RER1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 216.9 bits (551), Expect = 5.400e-53 Identity = 107/173 (61.85%), Postives = 135/173 (78.03%), Query Frame = 0 Query: 6 GDP---SFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPT--NEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYA 174 GDP S VE+ + R++QH+LD+STV++ RW F +L Y +RV+ +NGWFIVTYGLGIYLLN FIGFLSPQ+DPE+EGP+LPT + EEYRPF RR+PEFKFW++ A V+ GMTFF FFD+PV+WPILL+YFI LFV+TM++QI HMIKH+YVP S GK Y+ Sbjct: 4 GDPRPASAVEKFWAQVGRQYQHLLDKSTVHLKARWAAFAGLLLFYLIRVYMLNGWFIVTYGLGIYLLNMFIGFLSPQVDPETEGPVLPTAGRDTEEYRPFNRRVPEFKFWHKATVAVVVSIGMTFFSFFDIPVFWPILLVYFILLFVMTMRKQIAHMIKHKYVPVSWGKKTYS 176
BLAST of NO09G03030 vs. NCBI_GenBank
Match: CCA23199.1 (protein RER1A putative [Albugo laibachii Nc14]) HSP 1 Score: 216.1 bits (549), Expect = 9.200e-53 Identity = 101/171 (59.06%), Postives = 132/171 (77.19%), Query Frame = 0 Query: 7 DPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGGGE 178 +PSF+ +V S+ RKWQH+LDRST+YV RW + ++L Y++RV Y+N + IVTYGLGIYLLN IGFLSPQ+D E EGPLLP+ + EE+RPF R++PEF+FWY AKAT+V+ +TF FD+PV+WP+LL+YFI LF +TMKRQI+HM K+ YVPW+ GK Y E Sbjct: 423 EPSFISRVTASIGRKWQHMLDRSTIYVSTRWTLAFLLLTTYSIRVLYLNAFHIVTYGLGIYLLNMLIGFLSPQID-EYEGPLLPSRQSEEFRPFTRKVPEFQFWYSVAKATFVSLLLTFNSTFDIPVFWPVLLIYFIILFAMTMKRQIKHMWKYNYVPWNRGKKVYGKASE 592
BLAST of NO09G03030 vs. NCBI_GenBank
Match: XP_024402818.1 (protein RER1A-like [Physcomitrella patens] >PNR35552.1 hypothetical protein PHYPA_023452 [Physcomitrella patens]) HSP 1 Score: 214.9 bits (546), Expect = 2.100e-52 Identity = 105/172 (61.05%), Postives = 132/172 (76.74%), Query Frame = 0 Query: 3 ESDGDPSFVEQVAVSLQRKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAG 175 E D + + + + R++Q+ LD+ST + G+RWV +V+ +Y LR +Y+ G++IVTYGLGIYLLN IGFLSPQ+DPESEGP LPT +E++PF RRLPEFKFWY KA VAF +TFF FDVPV+WPILLLY+I LFVLTMKRQIRHMIK+RYVP+S GK +Y G Sbjct: 8 EGDASSNALLKWRNQMGRRFQYYLDKSTPHAGMRWVATLVVAAIYCLRAYYVKGFYIVTYGLGIYLLNLLIGFLSPQVDPESEGPALPTKGSDEFKPFIRRLPEFKFWYAFTKALIVAFTLTFFSIFDVPVFWPILLLYWIVLFVLTMKRQIRHMIKYRYVPFSLGKQRYTG 179
BLAST of NO09G03030 vs. NCBI_GenBank
Match: OQR92589.1 (protein RER1A [Achlya hypogyna]) HSP 1 Score: 214.9 bits (546), Expect = 2.100e-52 Identity = 101/159 (63.52%), Postives = 128/159 (80.50%), Query Frame = 0 Query: 20 RKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAGGGEK 179 RKWQH+LD+ST++V RW+ V++ +Y RV IN + IVTYGLGIYLLN FIGFLSPQ+DPE+EGP+LP+ + EE+RPF+RR+PEFKFWY KAT+ A MTFF+ F++PV+WPILL+YFI LF LTMKRQI+HM KH YVPW++GK Y G +K Sbjct: 46 RKWQHLLDQSTIHVTGRWIFSAVLIFVYLARVLSINSFHIVTYGLGIYLLNLFIGFLSPQIDPETEGPVLPSAKSEEFRPFSRRVPEFKFWYATTKATFYALLMTFFEIFNIPVFWPILLMYFIVLFTLTMKRQIKHMWKHNYVPWNHGKQVYKGKAQK 204
BLAST of NO09G03030 vs. NCBI_GenBank
Match: KOO34716.1 (rer1a protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 214.5 bits (545), Expect = 2.700e-52 Identity = 97/155 (62.58%), Postives = 128/155 (82.58%), Query Frame = 0 Query: 20 RKWQHILDRSTVYVGLRWVIFVVMLGLYALRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTNEREEYRPFARRLPEFKFWYQCAKATWVAFGMTFFDFFDVPVYWPILLLYFISLFVLTMKRQIRHMIKHRYVPWSNGKAKYAG 175 RKWQH++D+S + RW++ ++++ +Y LRV++++GW+I+TYGLGIY+LN IGFLSPQ+DPE+EGP LPT +E+RPF RRLPEFKFWY KA VAF MTFF F++PV+WPILLLYFI+LF LTMKRQI+HM+K+RYVP+S GK +Y G Sbjct: 21 RKWQHLMDQSAPHTVPRWILTLLIVIIYCLRVYFLHGWYIITYGLGIYVLNLLIGFLSPQVDPEAEGPTLPTTRDDEFRPFIRRLPEFKFWYSLTKAFCVAFVMTFFSVFNIPVFWPILLLYFIALFALTMKRQIKHMVKYRYVPFSLGKTRYQG 175 The following BLAST results are available for this feature:
BLAST of NO09G03030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03030 ID=NO09G03030|Name=NO09G03030|organism=Nannochloropsis oceanica|type=gene|length=2020bpback to top protein sequence of NO09G03030.1 >NO09G03030.1-protein ID=NO09G03030.1-protein|Name=NO09G03030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=184bpback to top Synonyms
Publications
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