NO09G02900, NO09G02900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_105222169.1 (histone deacetylase [Gloeocapsopsis sp. AAB1 = 1H9]) HSP 1 Score: 256.5 bits (654), Expect = 1.300e-64 Identity = 135/324 (41.67%), Postives = 192/324 (59.26%), Query Frame = 0 Query: 56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH---LKAPT-TTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376 V+YS+ FLEHK +HPE P R+S A L+ + H ++PT T+ A A V ++H P Y++ +R ++ GGG +D DT V+ +Y+V LLA +AW+D + L P+F LTRPPGHHA + MGFC+F+ A IAA YA ++ RVAILD D HHGNG + V P + + S HQ +P TGQ S+ G + N+LN+P+ + + Y PL +EKV+PFL+ F PDL+IVSAGYD DPLA++AL P+D+ E L+ K++FGLEGGY+ ++ ++VATL+ L Sbjct: 4 VIYSDEFLEHKTGRFHPETPKRLSAIATALQQSEFAHQLEWRSPTPVTESQAFALVEQIHTPDYIKLVRYIAKTGGGYLDGDTLVSPRSYDVALLAVSAWLDGVKSVL--------------------TTHNPAFVLTRPPGHHAESDRGMGFCLFSNAAIAAYYALEQPNINRVAILDWDVHHGNGTQAIVENHPQIAFCSLHQSPCYPGTGQ-ASEQGKYNNVLNLPVSPGSTMAVYQPLFEEKVIPFLSNFQPDLLIVSAGYDANAADPLAEIALQPQDYGKFTEYCLQL--TPKVVFGLEGGYDFVALSQSVVATLEKCL 304
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_071190205.1 (histone deacetylase [Trichormus sp. NMC-1]) HSP 1 Score: 256.1 bits (653), Expect = 1.600e-64 Identity = 134/325 (41.23%), Postives = 191/325 (58.77%), Query Frame = 0 Query: 54 VNVLYSERFLEHKARGYHPENPLRVSVPAQVLK---HTPGIHLKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376 + ++YS+ FLEHK YHPE P R++ + LK T I +P TT+ ++ + +VH Y+ +++ ++ GGG +D DT V+ +Y++ LLA +AW+D L P+F L RPPGHHA MGFC+F+ A IA+ YA +K G RVAILD D HHGNG + V T P + Y S HQ ++P TG+ S+ G H N+LN+PI ++IT Y PL + K++PFL+ F PDL+IVSAGYD DDPLA + L P D+ E L KI+FGLEGGY+ ++A+++AT++P L Sbjct: 2 LQIIYSDEFLEHKTGRYHPEKPERLTAIVKALKAASFTEQIEWLSP-TTKPGQMSWIEKVHTARYINKLKEIAATGGGYLDGDTPVSPRSYDIALLAVSAWLDGIDAVL--------------------ATENPAFVLARPPGHHAESDAGMGFCLFSNAAIASVYALEKPGINRVAILDWDVHHGNGTQAIVETHPQIAYCSLHQYPAYPGTGK-ASEKGFHNNVLNLPIPPGSDITEYQPLWESKIIPFLSNFQPDLLIVSAGYDANADDPLASMNLQPEDYGLFTEYCLGL--TRKILFGLEGGYDLPTLSASVIATIEPCL 302
BLAST of NO09G02900 vs. NCBI_GenBank
Match: OWY65622.1 (hypothetical protein B7486_40865 [cyanobacterium TDX16]) HSP 1 Score: 256.1 bits (653), Expect = 1.600e-64 Identity = 133/320 (41.56%), Postives = 190/320 (59.38%), Query Frame = 0 Query: 56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH---LKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373 V+YS+ FLEHK +HPE P R+S A L+HT H ++P T + A+A + +VH P +++ +R LST+GGG +D DT V+ +Y+V LLA AW+D TL P+F L+RPPGHHA + MGFC+F+ A IAA YA ++ RVAILD D HHGNG + V P + + S HQ +P TG ++ G + N+LN+P+ + I Y P+ + +V+PFLT F PDL+IVSAGYD DPLA++ L P+D+ E L+ R I+FGLEGGY+ ++ ++VAT++ Sbjct: 4 VIYSDEFLEHKTGRFHPEKPERISAIASALQHTSFAHKLEWRSPVTDFQRAIAWLKKVHSPHHIQSVRELSTQGGGYLDLDTPVSPRSYDVALLAVNAWLDGIDYTL--------------------ATNNPAFVLSRPPGHHAESDRGMGFCLFSNAAIAAHYALEQPNINRVAILDWDVHHGNGTQAIVENHPQIAFCSLHQSPCYPGTGA-AAETGAYNNVLNLPLPPGSTIADYQPVFETQVMPFLTEFQPDLLIVSAGYDANAADPLAEMYLQPQDYGLFTEFCLKITHR--IVFGLEGGYDLPALSQSVVATIE 300
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_094349716.1 (histone deacetylase [Nostoc sp. 'Peltigera membranacea cyanobiont' 210A] >OYD94635.1 hypothetical protein CDG76_14640 [Nostoc sp. 'Peltigera membranacea cyanobiont' 210A]) HSP 1 Score: 255.8 bits (652), Expect = 2.100e-64 Identity = 134/322 (41.61%), Postives = 191/322 (59.32%), Query Frame = 0 Query: 56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGI-----HLKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373 V+YS+ FL+HK YHPE P R+S A LK H P + Q + +++++R H PAY++++ +++ GGG +D DT V+ +Y+V LLA +AW+D L GS P+F L RPPGHHA MGFC+F+ A IAA +A ++ G RVAILD D HHGNG + V T P + Y S HQ +P TG+ ++ G H N+LN+PI ++IT Y PL + KV+PFL F PDL+IVSAGYD +DPLA + L P D+ + L KI+FGLEGGY+ ++++ ++VAT++ Sbjct: 4 VIYSDEFLDHKTGKYHPEKPERLSAIANALKAATFADQITWHFPTPASEQPSLMSSLVRAHSPAYIKKLWQIASSGGGPLDGDTPVSPRSYDVALLAVSAWLDGVEVVL----------GS----------ANPAFVLARPPGHHAESDAGMGFCLFSNAAIAALFALEQPGINRVAILDWDVHHGNGTQSIVETYPQIAYCSLHQYPCYPGTGR-ATERGFHNNILNLPIPPGSDITVYQPLFENKVVPFLANFQPDLLIVSAGYDANAEDPLASINLQPEDYALFTDYCLGI--TRKILFGLEGGYDFDSLSQSVVATIE 302
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_015154672.1 (histone deacetylase [Chroococcidiopsis thermalis] >AFY88125.1 histone deacetylase superfamily [Chroococcidiopsis thermalis PCC 7203]) HSP 1 Score: 255.0 bits (650), Expect = 3.700e-64 Identity = 132/320 (41.25%), Postives = 189/320 (59.06%), Query Frame = 0 Query: 56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH---LKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373 V+YS+ FLEHK +HPE P R+S A L+HT H ++P T + A+A + +VH P +++ +R L+T+GGG +D DT V+ +Y+V LLA AW+D TL P+F L+RPPGHHA + MGFC+F+ A IAA YA ++ VAILD D HHGNG + V P + + S HQ +P TG ++ G H N+LN+P+ + I Y P+ + +V+PFLT F PDL+IVSAGYD DPLA++ L P+D+ E L+ R I+FGLEGGY+ ++ ++VAT++ Sbjct: 4 VIYSDEFLEHKTGRFHPEKPERISAIASALQHTSFAHQLEWRSPVTDPQRAIAWLEKVHSPHHIQSVRELATQGGGYLDLDTPVSPRSYDVALLAVNAWLDGIDYTL--------------------ATNNPAFVLSRPPGHHAESDRGMGFCLFSNAAIAAHYALEQPNINHVAILDWDVHHGNGTQAIVEHHPQIAFCSLHQSPCYPGTGA-AAETGAHNNVLNLPLPPGSTIADYQPVFETQVIPFLTQFQPDLLIVSAGYDANAADPLAEMYLQPQDYGLFTEFCLKITHR--IVFGLEGGYDLPALSQSVVATIE 300
BLAST of NO09G02900 vs. NCBI_GenBank
Match: OIP71086.1 (hypothetical protein AUK48_12910 [Oscillatoriales cyanobacterium CG2_30_44_21]) HSP 1 Score: 255.0 bits (650), Expect = 3.700e-64 Identity = 133/329 (40.43%), Postives = 194/329 (58.97%), Query Frame = 0 Query: 56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHT---PGIHLKAPTTTQEA------ALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376 V+YS+ FLEH YHPEN R++ A LK + P + ++PT+ ++ L V R H Y++ +++ RGGG ID DT + TYEV LLA + W+D + + RP+F L RPPGHHA + MGFCIF A IAA A D+L +RVAILD D HHGNG ++AV P + Y S HQ+ +PMTG+ ++ G HGN+LN+P+R+ + + YLP+ + +++PFL +F PDL+IVSAG+D DDPLA + L P DF A + +L KI+FGLEGGY+ +++ ++++ ++ L Sbjct: 22 VIYSDFFLEHDTGSYHPENSGRLTAIANALKTSHIAPQLQWRSPTSMEKLKELHFDILQEVRRFHTQEYIDSVKAKCDRGGGYIDEDTVASRHTYEVALLAVSGWLD--------------------GVDIVLETGRPAFVLARPPGHHARAASGMGFCIFGNAAIAAMSACDRLNLRRVAILDWDVHHGNGTQDAVWDRPDIAYISTHQEHFYPMTGR-KNETGAHGNILNIPMRSGSAMLEYLPVFENQIIPFLKSFKPDLLIVSAGFDANADDPLASILLKPEDFGAFTKLVLEV--TPKILFGLEGGYDYASLSRSVISVIEQCL 327
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_067768040.1 (MULTISPECIES: histone deacetylase [Nostoc] >BAT53134.1 Histone deacetylase superfamily protein [Nostoc sp. NIES-3756] >BAY39140.1 histone deacetylase superfamily protein [Nostoc sp. NIES-2111]) HSP 1 Score: 254.6 bits (649), Expect = 4.800e-64 Identity = 134/327 (40.98%), Postives = 189/327 (57.80%), Query Frame = 0 Query: 54 VNVLYSERFLEHKARGYHPENPLRVSVPAQVLK---HTPGIHLKAPTTTQE--AALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376 ++V+YS+ FL+HK YHPE P R+ Q LK I + PT E + + ++ VH P Y+ +I+ ++T GGG +D DT V+ +Y+V LLA +AW+D L + P+F L RPPGHHA MGFC+F+ A IAA YA + G RVAI+D D HHGNG + V T P + Y S HQ +P TG+ ++ G H N+LN+P+ ++I+ Y PL ++KV+PFLT F PDL+IVSAGYD DDPLA + L P+D+ L KI+FGLEGGY+ + ++ ++VAT+ L Sbjct: 2 LSVIYSDEFLDHKTGNYHPEKPERLKAIVQALKDAAFAEKIVWREPTPALENSSVMQLLVNVHSPGYINKIKEIATTGGGYLDGDTPVSPRSYDVALLAVSAWLDGINTVLTSE--------------------NPAFVLARPPGHHAESDAGMGFCLFSNAAIAAYYALEMQGINRVAIIDWDVHHGNGTQAIVETNPQIAYCSLHQYPCYPGTGR-ATERGFHNNVLNLPVPPGSDISVYQPLWEKKVVPFLTEFQPDLLIVSAGYDANADDPLASVNLQPQDYGLFTNYCLGI--TRKILFGLEGGYDLDTLSQSVVATINSCL 305
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_017661223.1 (histone deacetylase [Geitlerinema sp. PCC 7105]) HSP 1 Score: 253.8 bits (647), Expect = 8.200e-64 Identity = 139/324 (42.90%), Postives = 188/324 (58.02%), Query Frame = 0 Query: 56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIHL---KAPTT-TQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376 + YS+ FLEHK +HPE P R+ V + LK HL + PT + A ++ +VH +YV+ +R ++ RGGG++D DT V+ TYEV LLA +AW+D + + E G +P+F L RPPGHHA R + MGFCIF IAA Y G RVAILD D HHGNG + ++T P + Y S HQ +P TG + + G + N+LN+PI T + Y L EK LPFL F PDL+I+SAGYD L DDPLA L L P D+ + E+ L+ I+FGLEGGY+ + +A A+V T++P L Sbjct: 27 IFYSDAFLEHKTGVFHPERPERLKVVVERLKSQRWAHLLQWETPTPFDRPAVFDSLSQVHPLSYVDRVRRIAERGGGHLDPDTPVSPRTYEVALLAVSAWIDGVDRVV--------ETG------------KPAFVLARPPGHHATRDRGMGFCIFANEAIAALYGLKHFGIDRVAILDWDVHHGNGTQSIIQTHPQLAYCSLHQSHCYPGTGFE-DERGCYNNVLNIPISVGTVSSVYQELFREKALPFLRDFRPDLLIISAGYDALKDDPLAGLYLNPEDYTELTEQCLQI--TEHILFGLEGGYDLDALAEAVVRTIEPCL 327
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_019503101.1 (histone deacetylase [Pseudanabaena sp. PCC 6802]) HSP 1 Score: 253.4 bits (646), Expect = 1.100e-63 Identity = 136/324 (41.98%), Postives = 193/324 (59.57%), Query Frame = 0 Query: 56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTP---GIHLKAPT-TTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376 ++YS+ FLEH+ +HPE P R++ L+ +P + + PT +Q L V R H P YV +++ + GGG +D DT V+ TY+V LLA +AW+D + E +G +P++ + RPPGHHA MGFCIF A IAA YA D+ +RVAILD D HHGNG +EAV P + Y S HQ +P TG P + G HGN+LN+PI A T + YLP +++VLPFL F PDL+IVSAG+D DDPLA + L P+D+ + + L+ KI+FGLEGGY+ E+++A+++A ++ L Sbjct: 8 IIYSDTFLEHQTGSFHPETPGRLTAIVSALQQSPWQEQLEWRQPTPISQRPILKEVQRFHTPEYVAQVKQICESGGGYLDGDTVVSSQTYDVALLAVSAWLD--------GIDLVEASG------------QPAWVIARPPGHHARARTGMGFCIFANAAIAAFYALDRPNIERVAILDWDVHHGNGTQEAVWEHPQIAYISTHQAPFYPGTGW-PQETGAHGNILNLPIAANTSMEEYLPTFEQQVLPFLVKFKPDLLIVSAGFDANRDDPLANICLLPQDYGTLTKLCLQ--HTRKILFGLEGGYDFESLSASVLAVVEQCL 308
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_028090714.1 (histone deacetylase [Dolichospermum circinale]) HSP 1 Score: 253.4 bits (646), Expect = 1.100e-63 Identity = 133/324 (41.05%), Postives = 186/324 (57.41%), Query Frame = 0 Query: 54 VNVLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH-----LKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373 + V+YS++FL+HK YHPE P R++ LK L P ++ + ++ + VH Y+ ++++++ GGG +D DT V+ +Y+V LLA +AW+D A + + P+F L RPPGHHA MGFC+F+ A IAA YA + G +RVAILD D HHGNG E V T P + Y S HQ ++P TG D S G H N+LN+PI ++IT Y PL + +LPFL F PDL+IVSAGYD +DPLA + L P DF E L KIMFGLEGGY+ ++A +++AT++ Sbjct: 2 LQVIYSDQFLDHKTGIYHPEKPARLTAIVDALKTASFAEKITWKLPTPVISKPSLMSCIESVHSTTYINKVKNIAANGGGYLDRDTPVSPRSYDVALLAVSAWLD--------------------AVDIVLNTADPAFVLARPPGHHAVSDTGMGFCLFSNAAIAAFYALQQPGIKRVAILDWDVHHGNGTEAIVETHPQIAYISLHQYPAYPGTG-DASQQGLHNNVLNLPISPGSDITVYQPLWENHILPFLNNFSPDLLIVSAGYDANANDPLASVNLQPEDFSLFTEYCLSI--TRKIMFGLEGGYDLPSLAKSVIATIQ 302 The following BLAST results are available for this feature:
BLAST of NO09G02900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02900 ID=NO09G02900|Name=NO09G02900|organism=Nannochloropsis oceanica|type=gene|length=1128bpback to top protein sequence of NO09G02900.1 >NO09G02900.1-protein ID=NO09G02900.1-protein|Name=NO09G02900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=376bpback to top Synonyms
Publications
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