NO09G02900, NO09G02900 (gene) Nannochloropsis oceanica

Overview
NameNO09G02900
Unique NameNO09G02900
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1128
Alignment locationchr9:849976..851103 -

Link to JBrowse

Properties
Property NameValue
DescriptionHistone deacetylase superfamily
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:849976..851103 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023696Ureohydrolase_domain
IPR023801His_deacetylse_dom
IPR000286His_deacetylse
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_105222169.1 (histone deacetylase [Gloeocapsopsis sp. AAB1 = 1H9])

HSP 1 Score: 256.5 bits (654), Expect = 1.300e-64
Identity = 135/324 (41.67%), Postives = 192/324 (59.26%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH---LKAPT-TTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            V+YS+ FLEHK   +HPE P R+S  A  L+ +   H    ++PT  T+  A A V ++H P Y++ +R ++  GGG +D DT V+  +Y+V LLA +AW+D  +  L                        P+F LTRPPGHHA   + MGFC+F+ A IAA YA ++    RVAILD D HHGNG +  V   P + + S HQ   +P TGQ  S+ G + N+LN+P+   + +  Y PL +EKV+PFL+ F PDL+IVSAGYD    DPLA++AL P+D+    E  L+     K++FGLEGGY+   ++ ++VATL+  L
Sbjct:    4 VIYSDEFLEHKTGRFHPETPKRLSAIATALQQSEFAHQLEWRSPTPVTESQAFALVEQIHTPDYIKLVRYIAKTGGGYLDGDTLVSPRSYDVALLAVSAWLDGVKSVL--------------------TTHNPAFVLTRPPGHHAESDRGMGFCLFSNAAIAAYYALEQPNINRVAILDWDVHHGNGTQAIVENHPQIAFCSLHQSPCYPGTGQ-ASEQGKYNNVLNLPVSPGSTMAVYQPLFEEKVIPFLSNFQPDLLIVSAGYDANAADPLAEIALQPQDYGKFTEYCLQL--TPKVVFGLEGGYDFVALSQSVVATLEKCL 304          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_071190205.1 (histone deacetylase [Trichormus sp. NMC-1])

HSP 1 Score: 256.1 bits (653), Expect = 1.600e-64
Identity = 134/325 (41.23%), Postives = 191/325 (58.77%), Query Frame = 0
Query:   54 VNVLYSERFLEHKARGYHPENPLRVSVPAQVLK---HTPGIHLKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            + ++YS+ FLEHK   YHPE P R++   + LK    T  I   +P TT+   ++ + +VH   Y+ +++ ++  GGG +D DT V+  +Y++ LLA +AW+D     L                        P+F L RPPGHHA     MGFC+F+ A IA+ YA +K G  RVAILD D HHGNG +  V T P + Y S HQ  ++P TG+  S+ G H N+LN+PI   ++IT Y PL + K++PFL+ F PDL+IVSAGYD   DDPLA + L P D+    E  L      KI+FGLEGGY+   ++A+++AT++P L
Sbjct:    2 LQIIYSDEFLEHKTGRYHPEKPERLTAIVKALKAASFTEQIEWLSP-TTKPGQMSWIEKVHTARYINKLKEIAATGGGYLDGDTPVSPRSYDIALLAVSAWLDGIDAVL--------------------ATENPAFVLARPPGHHAESDAGMGFCLFSNAAIASVYALEKPGINRVAILDWDVHHGNGTQAIVETHPQIAYCSLHQYPAYPGTGK-ASEKGFHNNVLNLPIPPGSDITEYQPLWESKIIPFLSNFQPDLLIVSAGYDANADDPLASMNLQPEDYGLFTEYCLGL--TRKILFGLEGGYDLPTLSASVIATIEPCL 302          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: OWY65622.1 (hypothetical protein B7486_40865 [cyanobacterium TDX16])

HSP 1 Score: 256.1 bits (653), Expect = 1.600e-64
Identity = 133/320 (41.56%), Postives = 190/320 (59.38%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH---LKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373
            V+YS+ FLEHK   +HPE P R+S  A  L+HT   H    ++P T  + A+A + +VH P +++ +R LST+GGG +D DT V+  +Y+V LLA  AW+D    TL                        P+F L+RPPGHHA   + MGFC+F+ A IAA YA ++    RVAILD D HHGNG +  V   P + + S HQ   +P TG   ++ G + N+LN+P+   + I  Y P+ + +V+PFLT F PDL+IVSAGYD    DPLA++ L P+D+    E  L+   R  I+FGLEGGY+   ++ ++VAT++
Sbjct:    4 VIYSDEFLEHKTGRFHPEKPERISAIASALQHTSFAHKLEWRSPVTDFQRAIAWLKKVHSPHHIQSVRELSTQGGGYLDLDTPVSPRSYDVALLAVNAWLDGIDYTL--------------------ATNNPAFVLSRPPGHHAESDRGMGFCLFSNAAIAAHYALEQPNINRVAILDWDVHHGNGTQAIVENHPQIAFCSLHQSPCYPGTGA-AAETGAYNNVLNLPLPPGSTIADYQPVFETQVMPFLTEFQPDLLIVSAGYDANAADPLAEMYLQPQDYGLFTEFCLKITHR--IVFGLEGGYDLPALSQSVVATIE 300          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_094349716.1 (histone deacetylase [Nostoc sp. 'Peltigera membranacea cyanobiont' 210A] >OYD94635.1 hypothetical protein CDG76_14640 [Nostoc sp. 'Peltigera membranacea cyanobiont' 210A])

HSP 1 Score: 255.8 bits (652), Expect = 2.100e-64
Identity = 134/322 (41.61%), Postives = 191/322 (59.32%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGI-----HLKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373
            V+YS+ FL+HK   YHPE P R+S  A  LK          H   P + Q + +++++R H PAY++++  +++ GGG +D DT V+  +Y+V LLA +AW+D     L          GS            P+F L RPPGHHA     MGFC+F+ A IAA +A ++ G  RVAILD D HHGNG +  V T P + Y S HQ   +P TG+  ++ G H N+LN+PI   ++IT Y PL + KV+PFL  F PDL+IVSAGYD   +DPLA + L P D+    +  L      KI+FGLEGGY+ ++++ ++VAT++
Sbjct:    4 VIYSDEFLDHKTGKYHPEKPERLSAIANALKAATFADQITWHFPTPASEQPSLMSSLVRAHSPAYIKKLWQIASSGGGPLDGDTPVSPRSYDVALLAVSAWLDGVEVVL----------GS----------ANPAFVLARPPGHHAESDAGMGFCLFSNAAIAALFALEQPGINRVAILDWDVHHGNGTQSIVETYPQIAYCSLHQYPCYPGTGR-ATERGFHNNILNLPIPPGSDITVYQPLFENKVVPFLANFQPDLLIVSAGYDANAEDPLASINLQPEDYALFTDYCLGI--TRKILFGLEGGYDFDSLSQSVVATIE 302          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_015154672.1 (histone deacetylase [Chroococcidiopsis thermalis] >AFY88125.1 histone deacetylase superfamily [Chroococcidiopsis thermalis PCC 7203])

HSP 1 Score: 255.0 bits (650), Expect = 3.700e-64
Identity = 132/320 (41.25%), Postives = 189/320 (59.06%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH---LKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373
            V+YS+ FLEHK   +HPE P R+S  A  L+HT   H    ++P T  + A+A + +VH P +++ +R L+T+GGG +D DT V+  +Y+V LLA  AW+D    TL                        P+F L+RPPGHHA   + MGFC+F+ A IAA YA ++     VAILD D HHGNG +  V   P + + S HQ   +P TG   ++ G H N+LN+P+   + I  Y P+ + +V+PFLT F PDL+IVSAGYD    DPLA++ L P+D+    E  L+   R  I+FGLEGGY+   ++ ++VAT++
Sbjct:    4 VIYSDEFLEHKTGRFHPEKPERISAIASALQHTSFAHQLEWRSPVTDPQRAIAWLEKVHSPHHIQSVRELATQGGGYLDLDTPVSPRSYDVALLAVNAWLDGIDYTL--------------------ATNNPAFVLSRPPGHHAESDRGMGFCLFSNAAIAAHYALEQPNINHVAILDWDVHHGNGTQAIVEHHPQIAFCSLHQSPCYPGTGA-AAETGAHNNVLNLPLPPGSTIADYQPVFETQVIPFLTQFQPDLLIVSAGYDANAADPLAEMYLQPQDYGLFTEFCLKITHR--IVFGLEGGYDLPALSQSVVATIE 300          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: OIP71086.1 (hypothetical protein AUK48_12910 [Oscillatoriales cyanobacterium CG2_30_44_21])

HSP 1 Score: 255.0 bits (650), Expect = 3.700e-64
Identity = 133/329 (40.43%), Postives = 194/329 (58.97%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHT---PGIHLKAPTTTQEA------ALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            V+YS+ FLEH    YHPEN  R++  A  LK +   P +  ++PT+ ++        L  V R H   Y++ +++   RGGG ID DT  +  TYEV LLA + W+D                       + +   RP+F L RPPGHHA  +  MGFCIF  A IAA  A D+L  +RVAILD D HHGNG ++AV   P + Y S HQ+  +PMTG+  ++ G HGN+LN+P+R+ + +  YLP+ + +++PFL +F PDL+IVSAG+D   DDPLA + L P DF A  + +L      KI+FGLEGGY+  +++ ++++ ++  L
Sbjct:   22 VIYSDFFLEHDTGSYHPENSGRLTAIANALKTSHIAPQLQWRSPTSMEKLKELHFDILQEVRRFHTQEYIDSVKAKCDRGGGYIDEDTVASRHTYEVALLAVSGWLD--------------------GVDIVLETGRPAFVLARPPGHHARAASGMGFCIFGNAAIAAMSACDRLNLRRVAILDWDVHHGNGTQDAVWDRPDIAYISTHQEHFYPMTGR-KNETGAHGNILNIPMRSGSAMLEYLPVFENQIIPFLKSFKPDLLIVSAGFDANADDPLASILLKPEDFGAFTKLVLEV--TPKILFGLEGGYDYASLSRSVISVIEQCL 327          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_067768040.1 (MULTISPECIES: histone deacetylase [Nostoc] >BAT53134.1 Histone deacetylase superfamily protein [Nostoc sp. NIES-3756] >BAY39140.1 histone deacetylase superfamily protein [Nostoc sp. NIES-2111])

HSP 1 Score: 254.6 bits (649), Expect = 4.800e-64
Identity = 134/327 (40.98%), Postives = 189/327 (57.80%), Query Frame = 0
Query:   54 VNVLYSERFLEHKARGYHPENPLRVSVPAQVLK---HTPGIHLKAPTTTQE--AALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            ++V+YS+ FL+HK   YHPE P R+    Q LK       I  + PT   E  + +  ++ VH P Y+ +I+ ++T GGG +D DT V+  +Y+V LLA +AW+D     L  +                     P+F L RPPGHHA     MGFC+F+ A IAA YA +  G  RVAI+D D HHGNG +  V T P + Y S HQ   +P TG+  ++ G H N+LN+P+   ++I+ Y PL ++KV+PFLT F PDL+IVSAGYD   DDPLA + L P+D+       L      KI+FGLEGGY+ + ++ ++VAT+   L
Sbjct:    2 LSVIYSDEFLDHKTGNYHPEKPERLKAIVQALKDAAFAEKIVWREPTPALENSSVMQLLVNVHSPGYINKIKEIATTGGGYLDGDTPVSPRSYDVALLAVSAWLDGINTVLTSE--------------------NPAFVLARPPGHHAESDAGMGFCLFSNAAIAAYYALEMQGINRVAIIDWDVHHGNGTQAIVETNPQIAYCSLHQYPCYPGTGR-ATERGFHNNVLNLPVPPGSDISVYQPLWEKKVVPFLTEFQPDLLIVSAGYDANADDPLASVNLQPQDYGLFTNYCLGI--TRKILFGLEGGYDLDTLSQSVVATINSCL 305          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_017661223.1 (histone deacetylase [Geitlerinema sp. PCC 7105])

HSP 1 Score: 253.8 bits (647), Expect = 8.200e-64
Identity = 139/324 (42.90%), Postives = 188/324 (58.02%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIHL---KAPTT-TQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            + YS+ FLEHK   +HPE P R+ V  + LK     HL   + PT   + A   ++ +VH  +YV+ +R ++ RGGG++D DT V+  TYEV LLA +AW+D   + +        E G            +P+F L RPPGHHA R + MGFCIF    IAA Y     G  RVAILD D HHGNG +  ++T P + Y S HQ   +P TG +  + G + N+LN+PI   T  + Y  L  EK LPFL  F PDL+I+SAGYD L DDPLA L L P D+  + E+ L+      I+FGLEGGY+ + +A A+V T++P L
Sbjct:   27 IFYSDAFLEHKTGVFHPERPERLKVVVERLKSQRWAHLLQWETPTPFDRPAVFDSLSQVHPLSYVDRVRRIAERGGGHLDPDTPVSPRTYEVALLAVSAWIDGVDRVV--------ETG------------KPAFVLARPPGHHATRDRGMGFCIFANEAIAALYGLKHFGIDRVAILDWDVHHGNGTQSIIQTHPQLAYCSLHQSHCYPGTGFE-DERGCYNNVLNIPISVGTVSSVYQELFREKALPFLRDFRPDLLIISAGYDALKDDPLAGLYLNPEDYTELTEQCLQI--TEHILFGLEGGYDLDALAEAVVRTIEPCL 327          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_019503101.1 (histone deacetylase [Pseudanabaena sp. PCC 6802])

HSP 1 Score: 253.4 bits (646), Expect = 1.100e-63
Identity = 136/324 (41.98%), Postives = 193/324 (59.57%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTP---GIHLKAPT-TTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            ++YS+ FLEH+   +HPE P R++     L+ +P    +  + PT  +Q   L  V R H P YV +++ +   GGG +D DT V+  TY+V LLA +AW+D          +  E +G            +P++ + RPPGHHA     MGFCIF  A IAA YA D+   +RVAILD D HHGNG +EAV   P + Y S HQ   +P TG  P + G HGN+LN+PI A T +  YLP  +++VLPFL  F PDL+IVSAG+D   DDPLA + L P+D+  + +  L+     KI+FGLEGGY+ E+++A+++A ++  L
Sbjct:    8 IIYSDTFLEHQTGSFHPETPGRLTAIVSALQQSPWQEQLEWRQPTPISQRPILKEVQRFHTPEYVAQVKQICESGGGYLDGDTVVSSQTYDVALLAVSAWLD--------GIDLVEASG------------QPAWVIARPPGHHARARTGMGFCIFANAAIAAFYALDRPNIERVAILDWDVHHGNGTQEAVWEHPQIAYISTHQAPFYPGTGW-PQETGAHGNILNLPIAANTSMEEYLPTFEQQVLPFLVKFKPDLLIVSAGFDANRDDPLANICLLPQDYGTLTKLCLQ--HTRKILFGLEGGYDFESLSASVLAVVEQCL 308          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_028090714.1 (histone deacetylase [Dolichospermum circinale])

HSP 1 Score: 253.4 bits (646), Expect = 1.100e-63
Identity = 133/324 (41.05%), Postives = 186/324 (57.41%), Query Frame = 0
Query:   54 VNVLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH-----LKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373
            + V+YS++FL+HK   YHPE P R++     LK           L  P  ++ + ++ +  VH   Y+ ++++++  GGG +D DT V+  +Y+V LLA +AW+D                    A  + +    P+F L RPPGHHA     MGFC+F+ A IAA YA  + G +RVAILD D HHGNG E  V T P + Y S HQ  ++P TG D S  G H N+LN+PI   ++IT Y PL +  +LPFL  F PDL+IVSAGYD   +DPLA + L P DF    E  L      KIMFGLEGGY+  ++A +++AT++
Sbjct:    2 LQVIYSDQFLDHKTGIYHPEKPARLTAIVDALKTASFAEKITWKLPTPVISKPSLMSCIESVHSTTYINKVKNIAANGGGYLDRDTPVSPRSYDVALLAVSAWLD--------------------AVDIVLNTADPAFVLARPPGHHAVSDTGMGFCLFSNAAIAAFYALQQPGIKRVAILDWDVHHGNGTEAIVETHPQIAYISLHQYPAYPGTG-DASQQGLHNNVLNLPISPGSDITVYQPLWENHILPFLNNFSPDLLIVSAGYDANANDPLASVNLQPEDFSLFTEYCLSI--TRKIMFGLEGGYDLPSLAKSVIATIQ 302          
The following BLAST results are available for this feature:
BLAST of NO09G02900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_105222169.11.300e-6441.67histone deacetylase [Gloeocapsopsis sp. AAB1 = 1H9... [more]
WP_071190205.11.600e-6441.23histone deacetylase [Trichormus sp. NMC-1][more]
OWY65622.11.600e-6441.56hypothetical protein B7486_40865 [cyanobacterium T... [more]
WP_094349716.12.100e-6441.61histone deacetylase [Nostoc sp. 'Peltigera membran... [more]
WP_015154672.13.700e-6441.25histone deacetylase [Chroococcidiopsis thermalis] ... [more]
OIP71086.13.700e-6440.43hypothetical protein AUK48_12910 [Oscillatoriales ... [more]
WP_067768040.14.800e-6440.98MULTISPECIES: histone deacetylase [Nostoc] >BAT531... [more]
WP_017661223.18.200e-6442.90histone deacetylase [Geitlerinema sp. PCC 7105][more]
WP_019503101.11.100e-6341.98histone deacetylase [Pseudanabaena sp. PCC 6802][more]
WP_028090714.11.100e-6341.05histone deacetylase [Dolichospermum circinale][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR022ncniR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010823NSK010823Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02900.1NO09G02900.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02900.1NO09G02900.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02900 ID=NO09G02900|Name=NO09G02900|organism=Nannochloropsis oceanica|type=gene|length=1128bp
ATGCATATAATCAGGGCAAGACCAAGATCGCTATTATCTAGCTTGCTCGT
TTCCCTATTTATCGTCACGTTTCCAGTCTGCGCTTTTCTTCCCGTCTATC
CCATCCCTGCCCACAACTCTCGCCTCATTCCCATCCACGCCACCGTCGCC
GGCACGGGCGTCAATGTCCTCTACTCTGAGCGCTTTCTAGAACACAAAGC
ACGAGGCTACCATCCGGAAAATCCTTTACGGGTTTCGGTCCCAGCGCAAG
TCCTTAAGCACACTCCAGGGATTCATCTAAAGGCGCCCACCACGACTCAA
GAGGCGGCGTTGGCCGCAGTCCTGCGAGTCCACGACCCGGCTTACGTGGA
GGAAATCAGATCCTTATCCACGCGAGGTGGAGGAAATATCGATGCAGATA
CGTTTGTCAATGGTGCGACATATGAGGTGTGTTTGTTGGCAGCGACTGCT
TGGATGGATTGCGCCAGACAGACCTTGTTTGGGGACGAGGAAGAGGAGGA
GGAGGCAGGGTCGCTTGCGGCTACGCCCGTCCGGGTTCCCATCCGACGAC
CTTCTTTTGCCTTGACTCGGCCACCGGGTCATCATGCAGGACGCTCACAG
GCAATGGGCTTCTGCATCTTCAACTTTGCTGTGATTGCCGCCCGGTATGC
ATTCGACAAGTTGGGTTGCCAACGAGTGGCGATTTTGGATTTGGACGCTC
ACCACGGGAATGGGAATGAGGAGGCGGTCCGTACAGAACCTTCCATGTGC
TATGCATCATTCCACCAGCAAGATTCATTTCCGATGACGGGCCAAGATCC
GAGCGATCACGGGCCTCACGGGAATCTGCTCAATGTCCCTATCCGTGCCT
ACACCGAAATTACATCTTACCTGCCCCTGCTGGACGAGAAGGTCCTTCCC
TTCTTAACGGCGTTCGGGCCTGACCTTGTTATTGTCTCGGCGGGCTATGA
TTGTTTGGTGGACGATCCACTGGCACAGTTGGCCTTGGGTCCCCGGGATT
TTGAGGCGGTGGGGGAGAGGCTGTTGAGAGCGTTCGGAAGAGGGAAGATT
ATGTTTGGATTGGAAGGAGGATACGAGCCGGAGAATGTGGCGGCAGCGAT
TGTGGCGACGTTGAAACCATTTCTATAG
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protein sequence of NO09G02900.1

>NO09G02900.1-protein ID=NO09G02900.1-protein|Name=NO09G02900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=376bp
MHIIRARPRSLLSSLLVSLFIVTFPVCAFLPVYPIPAHNSRLIPIHATVA
GTGVNVLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIHLKAPTTTQ
EAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATA
WMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQ
AMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMC
YASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLP
FLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKI
MFGLEGGYEPENVAAAIVATLKPFL*
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Synonyms
Publications