NO09G02900, NO09G02900 (gene) Nannochloropsis oceanica

Overview
NameNO09G02900
Unique NameNO09G02900
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1128
Alignment locationchr9:849976..851103 -

Link to JBrowse

Properties
Property NameValue
DescriptionHistone deacetylase superfamily
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:849976..851103 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023696Ureohydrolase_domain
IPR023801His_deacetylse_dom
IPR000286His_deacetylse
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO09G02900 vs. NCBI_GenBank
Match: EWM27517.1 (histone deacetylase superfamily [Nannochloropsis gaditana])

HSP 1 Score: 484.2 bits (1245), Expect = 3.700e-133
Identity = 241/358 (67.32%), Postives = 285/358 (79.61%), Query Frame = 0
Query:    7 RPRSLLSSLLVSLFIVTFPVCAFLPVYPIPAHNSRLIPIHATVAGTGVNVLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIHLKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGD-EEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENV 364
            R +++    L+ L +  F V AF+     PA   RL+P  A     GVNV+YSERFLEHKARGYHPENPLRVSVPAQ+LKHTPG+ L  P  ++E ALA +L+VHD  YVEE+++LS RGGG++DADT+VN ATY+VCLLAA AWMDC  +TL G+ EE   E G      V   IRRPSFALTRPPGHHA   QAMGFCIFNFA +AA YA D+LGC++VAILDLDAHHGNG++  VRT PS+CYASFHQ+D+FPMTG DP D+GPHGNLL+VPI AY+ + +YLPLLD+KVLPFLTAF PDL+IVS GYDCLVDDPLAQLALGP+DF AVG+RLLRAFGR KI+FGLEGGY+P+NV
Sbjct:    5 RTKTIFFVWLLHLSLAAFVVHAFVTNVAKPALR-RLLPRCA----AGVNVIYSERFLEHKARGYHPENPLRVSVPAQLLKHTPGVRLYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYDPDNV 357          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_075601228.1 (histone deacetylase [Leptolyngbya sp. 'hensonii'] >OLP15679.1 hypothetical protein BST81_24925 [Leptolyngbya sp. 'hensonii'])

HSP 1 Score: 268.9 bits (686), Expect = 2.400e-68
Identity = 141/326 (43.25%), Postives = 187/326 (57.36%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTP-GIHL-----KAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            ++Y++ FL H    +HPE+P R+S    VL+  P   HL      +P    +  L  +  +H   YVE ++ ++ +GGGN+D DT V+  TYEV LLA  AW+D   + L  D                    RP F L RPPGHHA R + MGFCIFN   IA+ YA  + GCQRVAILD D HHGNG +  V+  PS+ Y S HQ   FP TG+  +D GP GN+LN+P+   + I  Y P  + +V+PFL+ F PDL+IVSAGYD    DPLA + L P DF       L    R  I+FGLEGGY+P  +A ++VAT++P L
Sbjct:    4 IIYTDEFLLHDPGNFHPESPARLSAITTVLRTLPWKEHLDWRSPSSPEVRGDMLLHIIYHIHTEGYVEAVKQVAHQGGGNLDPDTVVSPHTYEVALLAVNAWLDGVDEALIAD--------------------RPVFVLARPPGHHALRDRGMGFCIFNHEAIASHYALTQPGCQRVAILDWDVHHGNGTQTLVQHHPSIAYCSLHQSPLFPGTGRS-NDRGPFGNVLNIPMLPQSSIADYKPAFERQVVPFLSNFQPDLLIVSAGYDACTTDPLADICLEPEDFGLFTRYCLPITRR--IVFGLEGGYDPPALAQSVVATIEPCL 306          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_066377486.1 (histone deacetylase [Anabaena sp. CA = ATCC 33047])

HSP 1 Score: 261.9 bits (668), Expect = 3.000e-66
Identity = 135/325 (41.54%), Postives = 196/325 (60.31%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHT---PGIHLKAPTTTQE--AALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            V+YS+ FL+HK   YHPENP R++     LK +     +  ++PT   E  + ++ V + H PAY+++++ ++  GGG +D DT V+  +Y+V LLA +AW+D    T+   E                    P+F L+RPPGHHA     MGFC+F+ A IAA YA ++    RVAILD D HHGNG +  V   P + Y S HQ   +P TG+  ++HG H N+LN+P+   ++IT Y PL+++K++PFL  F PDL+IVSAGYD   DDPLA + L PRD+  + +  L      KI+FGLEGGY+ E +A +++AT+ P L
Sbjct:    4 VIYSDEFLDHKTGRYHPENPERLTAIVNALKKSELAEKLTWQSPTPASENLSLMSLVTKAHSPAYIKKLQEIAATGGGYLDGDTPVSPRSYDVALLAVSAWLD-GVDTVLNSE-------------------NPAFVLSRPPGHHAESDTGMGFCLFSNAAIAAFYALEQPAVNRVAILDWDVHHGNGTQAIVEMHPQIAYCSLHQYPCYPGTGR-ATEHGFHNNVLNLPVPPGSDITVYQPLVEQKIVPFLAEFQPDLLIVSAGYDANADDPLASINLQPRDYAVLTDYCLGI--TRKILFGLEGGYDFETLAQSVIATIAPCL 305          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_106167591.1 (histone deacetylase [Chroococcidiopsis cubana] >PSB63620.1 histone deacetylase [Chroococcidiopsis cubana CCALA 043])

HSP 1 Score: 261.5 bits (667), Expect = 3.900e-66
Identity = 135/320 (42.19%), Postives = 192/320 (60.00%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH---LKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373
            V+YS+ FLEHK   +HPE P R+SV A  L+HT   H    ++P T  + A+A + +VH P +++ +R L+T+GGG +D DT V+  +Y+V LLA  AW+D    TL                        P+F L+RPPGHHA   + MGFC+F+ A IAA YA +K   +RVAILD D HHGNG +  V   P + + S HQ   +P TG   ++ G H N+LN+P+   + I  Y P+ + +V+PFLT F PDL+IVSAGYD    DPLA++ L P+D+    E  L+   R  I+FGLEGGY+   ++ ++VAT++
Sbjct:    4 VIYSDEFLEHKTGRFHPEKPERISVIASALQHTSFAHQLEWRSPVTDPQRAIAWLEKVHSPHHIQSVRELATQGGGYLDLDTPVSPRSYDVALLAVNAWLDGIDYTL--------------------ATNNPAFVLSRPPGHHAESDRGMGFCLFSNAAIAAHYALEKPNIERVAILDWDVHHGNGTQAIVENHPQIAFCSLHQSPCYPGTG-TAAETGAHNNVLNLPLPPGSTIADYQPVFETQVMPFLTQFQPDLLIVSAGYDANAADPLAEMYLQPQDYGLFTEFCLKITHR--IVFGLEGGYDLPALSQSVVATIE 300          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_066425351.1 (histone deacetylase [Anabaena sp. 4-3])

HSP 1 Score: 260.4 bits (664), Expect = 8.700e-66
Identity = 134/325 (41.23%), Postives = 196/325 (60.31%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHT---PGIHLKAPTTTQE--AALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            V+YS+ FL+HK   YHPENP R++     LK +     +  ++PT   E  + ++ + + H PAY+++++ ++  GGG +D DT V+  +Y+V LLA +AW+D    T+   E                    P+F L+RPPGHHA     MGFC+F+ A IAA YA ++    RVAILD D HHGNG +  V   P + Y S HQ   +P TG+  ++HG H N+LN+P+   ++IT Y PL+++K++PFL  F PDL+IVSAGYD   DDPLA + L PRD+  + +  L      KI+FGLEGGY+ E +A +++AT+ P L
Sbjct:    4 VIYSDEFLDHKTGRYHPENPERLTAIVNALKKSELAEKLTWQSPTPASENLSLMSLLSKAHSPAYIKKLQEIAATGGGYLDGDTPVSPRSYDVALLAVSAWLD-GVDTVLNSE-------------------NPAFVLSRPPGHHAESDTGMGFCLFSNAAIAAFYALEQPAVNRVAILDWDVHHGNGTQAIVEMHPQIAYCSLHQYPCYPGTGR-ATEHGFHNNVLNLPVPPGSDITVYQPLVEQKIVPFLAEFQPDLLIVSAGYDANADDPLASINLQPRDYAVLTDYCLGI--TRKILFGLEGGYDFETLAQSVIATIAPCL 305          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_099701762.1 (histone deacetylase [Chroococcales cyanobacterium IPPAS B-1203] >PIG92650.1 hypothetical protein CSQ79_13760 [Chroococcales cyanobacterium IPPAS B-1203])

HSP 1 Score: 260.0 bits (663), Expect = 1.100e-65
Identity = 137/324 (42.28%), Postives = 193/324 (59.57%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH---LKAPTTTQEA-ALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            V+YS+ FLEHK   +HPE P R+S  A  L+ +   H    ++PT   E+ ALA V R+H P Y+E +R ++  GGG ++ADT V+  +Y+V LLA +AW+D                       + +    P+F LTRPPGHHA   + MGFC+F+ A IAA YA ++    RVAILD D HHGNG +  V   P + + S HQ   +P TGQ  S+ G + N+LN+P+   + +  Y PL +EKV+PFL+ F PDL+IVSAGYD    DPLA++AL P D+    E  L+     K++FGLEGGY+   ++ ++VATL+  L
Sbjct:    4 VIYSDEFLEHKTGRFHPETPKRLSAIATALQQSKFAHHLEWRSPTPVNESPALAFVERIHTPKYIELVRYIANTGGGYLEADTLVSPRSYDVALLAVSAWLD--------------------GVSIVLENHNPAFVLTRPPGHHAESDRGMGFCLFSNAAIAAHYALEQPDINRVAILDWDVHHGNGTQAIVENHPQIAFCSLHQSPCYPGTGQ-ASEQGKYNNVLNLPVSPGSTMAVYQPLFEEKVVPFLSNFQPDLLIVSAGYDANAADPLAEIALQPHDYSKFTEYCLQL--TPKVVFGLEGGYDFAALSQSVVATLEKCL 304          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_106216077.1 (histone deacetylase [Cyanosarcina burmensis] >PSB49673.1 histone deacetylase [Cyanosarcina cf. burmensis CCALA 770])

HSP 1 Score: 258.5 bits (659), Expect = 3.300e-65
Identity = 133/320 (41.56%), Postives = 191/320 (59.69%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH---LKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373
            V+YS+ FLEHK   +HPE P R+S  A  L+HT   H    ++P T  + A+A + +VH P +++ +R L+T+GGG +D DT V+  +Y+V LLA  AW+D    TL                        P+F L+RPPGHHA   + MGFC+F+ A IAA YA +K   +RVAILD D HHGNG +  V   P + + S HQ   +P TG   ++ G H N+LN+P+   + I  Y P+ + +V+PFL+ F PDL+IVSAGYD    DPLA++ L P+D+    E  L+   R  I+FGLEGGY+   ++ ++VAT++
Sbjct:    4 VIYSDEFLEHKTGRFHPEKPERISAIASALQHTSFAHQLEWRSPVTDPQRAIAWLEKVHSPHHIQSVRELATQGGGYLDLDTPVSPRSYDVALLAVNAWLDGIDYTL--------------------ATNNPAFVLSRPPGHHAESDRGMGFCLFSNAAIAAHYALEKPNIERVAILDWDVHHGNGTQAIVENHPQIAFCSLHQSPCYPGTG-TAAETGAHNNVLNLPLPPGSTIADYQPVFETQVMPFLSQFQPDLLIVSAGYDANAADPLAEMYLQPQDYGLFTEFCLKITHR--IVFGLEGGYDLPALSQSVVATIE 300          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_106544506.1 (histone deacetylase [Chroococcidiopsis sp. CCALA 051] >PSM50536.1 histone deacetylase [Chroococcidiopsis sp. CCALA 051])

HSP 1 Score: 258.1 bits (658), Expect = 4.300e-65
Identity = 133/320 (41.56%), Postives = 191/320 (59.69%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIH---LKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373
            V+YS+ FLEHK   +HPE P R+S  A  L+HT   H    ++P T  + A+A + +VH P +++ +R L+T+GGG +D DT V+  +Y+V LLA  AW+D    TL                        P+F L+RPPGHHA   + MGFC+F+ A IAA YA ++   +RVAILD D HHGNG +  V   P + + S HQ   +P TG   ++ G H N+LN+P+   + I  Y P+ + +V+PFLT F PDL+IVSAGYD    DPLA++ L P+D+    E  L+   R  I+FGLEGGY+   ++ ++VAT++
Sbjct:    4 VIYSDEFLEHKTGRFHPEKPERISAIASALQHTSFAHQLEWRSPVTDPQRAIAWLEKVHSPHHIQSVRELATQGGGYLDLDTPVSPRSYDVALLAVNAWLDGIDYTL--------------------ATNNPAFVLSRPPGHHAESDRGMGFCLFSNAAIAAHYALEQPNIERVAILDWDVHHGNGTQAIVENHPHIAFCSLHQSPCYPGTG-TAAETGAHNNVLNLPLPPGSTIADYQPVFETQVMPFLTQFQPDLLIVSAGYDANAADPLAEMYLQPQDYGLFTEFCLKISHR--IVFGLEGGYDLPALSQSVVATIE 300          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_015202034.1 (histone deacetylase [Crinalium epipsammum] >AFZ11912.1 histone deacetylase superfamily [Crinalium epipsammum PCC 9333])

HSP 1 Score: 256.9 bits (655), Expect = 9.600e-65
Identity = 132/325 (40.62%), Postives = 192/325 (59.08%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGI-----HLKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLKPFL 376
            V+YS+ FL HK   +HPE P R++   + LK  P        +  P  T++  +  + +VH  +Y+E +  ++  GGG++DADT V+  +Y++ LLA +AW+D   + L  +                     P+F L+RPPGHHA R+  MGFC+F+ A IAA YA D+ G  RVAILD D HHGNG +  V T+P + Y S HQ   +P TG+  ++ G H N+LN+P+   + I  Y PL ++K++PFL  F PDL+IVSAGYD    DPLA +AL P D+    E  L+   R  I+FGLEGGY+  ++A +++ T+KP L
Sbjct:    4 VIYSDEFLNHKTGRFHPERPERLTAIVEALKAAPWADQIEWQIPTPLVTRQ-VMPLLQQVHSQSYIETVARIAQSGGGSLDADTAVSPQSYDIALLAISAWLDGVDRVLANN--------------------NPAFVLSRPPGHHAERNTGMGFCLFSNAAIAAYYALDQQGINRVAILDWDVHHGNGTQAIVETDPRIAYCSLHQSPCYPGTGK-ANEQGKHHNVLNLPLSPGSNIEVYQPLFEQKIIPFLKNFQPDLLIVSAGYDATAADPLAGMALQPEDYGLFTEYCLQLTRR--ILFGLEGGYDLNSLAQSVLQTIKPCL 304          
BLAST of NO09G02900 vs. NCBI_GenBank
Match: WP_099102776.1 (histone deacetylase [Nostoc sp. 'Peltigera malacea cyanobiont' DB3992] >PHM07606.1 hypothetical protein CK516_26060 [Nostoc sp. 'Peltigera malacea cyanobiont' DB3992])

HSP 1 Score: 256.9 bits (655), Expect = 9.600e-65
Identity = 134/322 (41.61%), Postives = 192/322 (59.63%), Query Frame = 0
Query:   56 VLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGI-----HLKAPTTTQEAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATAWMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQAMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMCYASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLPFLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKIMFGLEGGYEPENVAAAIVATLK 373
            V+YS+ FL+HK   YHPE P R+S  A  LK          HL  P + Q + ++++++ H PAY++++  +++ GGG +D DT V+  +Y+V LLA + W+D     L          GS            P+F L RPPGHHA     MGFC+F+ A IAA +A ++ G  RVAILD D HHGNG +  V T P + Y S HQ  S+P TG+  ++ G H N+LN+PI   ++IT Y PL + KV+PFL  F PDL+IVSAGYD   +DPLA + L P D+    +  L      KI+FGLEGGY+ ++++ ++VAT++
Sbjct:    4 VIYSDEFLDHKTGKYHPEKPERLSAIANALKAATFADQITWHLPTPASEQPSLMSSLVKAHSPAYIKKLWQIASSGGGPLDGDTPVSPRSYDVALLAVSGWLDGVEVVL----------GS----------ANPAFVLARPPGHHAESDAGMGFCLFSNAAIAALFALEQSGINRVAILDWDVHHGNGTQSIVETYPQIAYCSLHQYPSYPGTGR-ATERGFHNNILNLPIPPGSDITVYQPLFENKVVPFLANFQPDLLIVSAGYDANAEDPLASINLQPEDYALFTDYCLGI--TRKILFGLEGGYDFDSLSQSVVATIE 302          
The following BLAST results are available for this feature:
BLAST of NO09G02900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27517.13.700e-13367.32histone deacetylase superfamily [Nannochloropsis g... [more]
WP_075601228.12.400e-6843.25histone deacetylase [Leptolyngbya sp. 'hensonii'] ... [more]
WP_066377486.13.000e-6641.54histone deacetylase [Anabaena sp. CA = ATCC 33047][more]
WP_106167591.13.900e-6642.19histone deacetylase [Chroococcidiopsis cubana] >PS... [more]
WP_066425351.18.700e-6641.23histone deacetylase [Anabaena sp. 4-3][more]
WP_099701762.11.100e-6542.28histone deacetylase [Chroococcales cyanobacterium ... [more]
WP_106216077.13.300e-6541.56histone deacetylase [Cyanosarcina burmensis] >PSB4... [more]
WP_106544506.14.300e-6541.56histone deacetylase [Chroococcidiopsis sp. CCALA 0... [more]
WP_015202034.19.600e-6540.62histone deacetylase [Crinalium epipsammum] >AFZ119... [more]
WP_099102776.19.600e-6541.61histone deacetylase [Nostoc sp. 'Peltigera malacea... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR022ncniR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010823NSK010823Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02900.1NO09G02900.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02900.1NO09G02900.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02900 ID=NO09G02900|Name=NO09G02900|organism=Nannochloropsis oceanica|type=gene|length=1128bp
ATGCATATAATCAGGGCAAGACCAAGATCGCTATTATCTAGCTTGCTCGT
TTCCCTATTTATCGTCACGTTTCCAGTCTGCGCTTTTCTTCCCGTCTATC
CCATCCCTGCCCACAACTCTCGCCTCATTCCCATCCACGCCACCGTCGCC
GGCACGGGCGTCAATGTCCTCTACTCTGAGCGCTTTCTAGAACACAAAGC
ACGAGGCTACCATCCGGAAAATCCTTTACGGGTTTCGGTCCCAGCGCAAG
TCCTTAAGCACACTCCAGGGATTCATCTAAAGGCGCCCACCACGACTCAA
GAGGCGGCGTTGGCCGCAGTCCTGCGAGTCCACGACCCGGCTTACGTGGA
GGAAATCAGATCCTTATCCACGCGAGGTGGAGGAAATATCGATGCAGATA
CGTTTGTCAATGGTGCGACATATGAGGTGTGTTTGTTGGCAGCGACTGCT
TGGATGGATTGCGCCAGACAGACCTTGTTTGGGGACGAGGAAGAGGAGGA
GGAGGCAGGGTCGCTTGCGGCTACGCCCGTCCGGGTTCCCATCCGACGAC
CTTCTTTTGCCTTGACTCGGCCACCGGGTCATCATGCAGGACGCTCACAG
GCAATGGGCTTCTGCATCTTCAACTTTGCTGTGATTGCCGCCCGGTATGC
ATTCGACAAGTTGGGTTGCCAACGAGTGGCGATTTTGGATTTGGACGCTC
ACCACGGGAATGGGAATGAGGAGGCGGTCCGTACAGAACCTTCCATGTGC
TATGCATCATTCCACCAGCAAGATTCATTTCCGATGACGGGCCAAGATCC
GAGCGATCACGGGCCTCACGGGAATCTGCTCAATGTCCCTATCCGTGCCT
ACACCGAAATTACATCTTACCTGCCCCTGCTGGACGAGAAGGTCCTTCCC
TTCTTAACGGCGTTCGGGCCTGACCTTGTTATTGTCTCGGCGGGCTATGA
TTGTTTGGTGGACGATCCACTGGCACAGTTGGCCTTGGGTCCCCGGGATT
TTGAGGCGGTGGGGGAGAGGCTGTTGAGAGCGTTCGGAAGAGGGAAGATT
ATGTTTGGATTGGAAGGAGGATACGAGCCGGAGAATGTGGCGGCAGCGAT
TGTGGCGACGTTGAAACCATTTCTATAG
back to top

protein sequence of NO09G02900.1

>NO09G02900.1-protein ID=NO09G02900.1-protein|Name=NO09G02900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=376bp
MHIIRARPRSLLSSLLVSLFIVTFPVCAFLPVYPIPAHNSRLIPIHATVA
GTGVNVLYSERFLEHKARGYHPENPLRVSVPAQVLKHTPGIHLKAPTTTQ
EAALAAVLRVHDPAYVEEIRSLSTRGGGNIDADTFVNGATYEVCLLAATA
WMDCARQTLFGDEEEEEEAGSLAATPVRVPIRRPSFALTRPPGHHAGRSQ
AMGFCIFNFAVIAARYAFDKLGCQRVAILDLDAHHGNGNEEAVRTEPSMC
YASFHQQDSFPMTGQDPSDHGPHGNLLNVPIRAYTEITSYLPLLDEKVLP
FLTAFGPDLVIVSAGYDCLVDDPLAQLALGPRDFEAVGERLLRAFGRGKI
MFGLEGGYEPENVAAAIVATLKPFL*
back to top
Synonyms
Publications