NO09G02770, NO09G02770 (gene) Nannochloropsis oceanica

Overview
NameNO09G02770
Unique NameNO09G02770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1872
Alignment locationchr9:821282..823153 +

Link to JBrowse

Properties
Property NameValue
DescriptionCupin 4 family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:821282..823153 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
Homology
BLAST of NO09G02770 vs. NCBI_GenBank
Match: EWM27518.1 (cupin 4 family protein [Nannochloropsis gaditana])

HSP 1 Score: 558.5 bits (1438), Expect = 2.400e-155
Identity = 303/564 (53.72%), Postives = 402/564 (71.28%), Query Frame = 0
Query:   11 MVLF-VAFPTISVAAAAEDQHYQHPSHAHDDDNTVLSSLLGPIPGKESFFKEFWQAKPAVMRRHNPTFYRPIMQEGDLDAILVHSRTASLMDTLTGD---ADHPQNKHNDEAWKLVKRIRGENGEFWSSSPNASTRTQMLGLSPDATDVEVARAAFVQGYSLVVNHLEDKWHGTAQLALVFEEELGYRTSTNCYFTPARSQAFESHFDWMDAFVLQVEGSKRWRLYDALVDQPRPDMQFKPMTLEVGEPFIDFVLEAGDLLYLPSGLIHEALTEMEDGSGSSSLHLTVGVETTVIGSWESLLLEVLVVVTAAASEGNHDLPSSGAGLRDLRCPSGAAGERD-GEGKEHEMESASAMMSVFMSAIMTE---EGLRLGDMVALTLTHLATHERVLRRPVPLTPLMKRTKSRRRLGQLKELVTLVKEKSDIQGAWEWFMQKHKGTVPRSLAVFGKNFGGADRKEAAGKEMERRLATAAAAGT--VLSEEAKQGVHDALLCLEKALVDTVQAKAVLKHFDSVCQQDLATYQQQRKGILEQGVWQADIAAVDGQVDGPQVYGVGSHATT 565
            MV F + F  ++++  A +   + PS     DNTVLSS+LGP PGKE FF++FWQ KPAV+RRHNPTF++PIM++ DLDAILV S TAS++  L+      D  ++    ++W LVKRI+G +GE+WSS+P  +   Q+ GL  D+TD EVA AAF +GYSLV+N++EDK +GT++LAL FE ELGYRTS NCYFTP  SQAFE+HFDWMDAF+LQVEGSKRWRLYDALV+QPRPDMQFKP   ++GEP+IDFVLE GDLLYLPSG IHEAL E + G G+SSLHLTVG+ETTV+GSWESLLLEVL V++  ++E + DL S+ + +  L+C  G AGE    +      E+ S + S  ++  + +     LR GD++AL L  +A  ER LRRPVPL  LMKR    +RL  L ++V+L+KE+ D++GAW+ F+++ K +VPR+L VFGK+   +  + A G+EM+ RL  AAAA +   + +E +     AL CL+ AL D+VQ KA+  HF+ VCQ+DL   Q+QR+ +LE GVWQADI AVDG++   Q+YGVGS   T
Sbjct:    1 MVQFQLLFVWLALSFGAGEHQPRPPSTT--TDNTVLSSMLGPTPGKELFFRDFWQIKPAVIRRHNPTFFQPIMRQSDLDAILVQSSTASMLRGLSSSEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLTVLSGGSAE-DRDLHSTWSNVSALQCSRGPAGENAIDDSPNLPFENVSQVFSSVVTPKIEDCNGATLRQGDLIALVLMQVAMQERALRRPVPLKNLMKRNGKYKRLTHLTDVVSLLKEQGDVRGAWDAFIRERK-SVPRNLEVFGKS--DSKDRPAHGEEMKNRLLGAAAAWSDIEIPDEIQDDFLKALDCLQGALSDSVQTKAIFSHFEHVCQRDLVQRQEQRELLLEAGVWQADINAVDGKLQASQIYGVGSQTPT 558          
BLAST of NO09G02770 vs. NCBI_GenBank
Match: CBJ27173.1 (mina protein [Ectocarpus siliculosus])

HSP 1 Score: 166.0 bits (419), Expect = 3.400e-37
Identity = 147/503 (29.22%), Postives = 228/503 (45.33%), Query Frame = 0
Query:   43 TVLSSLLGPIPGKESFFKEFWQAKPAVMRRHNPTFYRPIMQEGDLDAILVHSRTASLMDTLTGDADHPQNKHNDEAWKLVKR--IRGENGEFWSSSPNASTRTQMLGLSPDATDVEVARAAFVQ-GYSLVVNHLEDKWHGTAQLALVFEEELGYRTSTNCYFTPARSQAFESHFDWMDAFVLQVEGSKRWRLYDALVDQPRPDMQFKPMTLEVGEPFIDFVLEAGDLLYLPSGLIHEAL---TEMEDGSG-----------SSSLHLTVGVETTVIGSWESLLLEVLVVVTAAASEGNHDLPSSGAGLRDLRCPSGAAGERDGEGKEHEMESASAMMSVFMSAIMTEEGLRLGDMVALTLTHLATHERVLRRPVPLTPLMKRTKSRRRLGQLKELVTLVKEKSDIQGAWEWFMQKHKGTV-PRSLAVFGKNFGGADRKEAAGKE----------MERRLATAAAAGTVLSEEAK--QGVHDALLCLEKALVDTVQAKAVLKHF 516
            T++  L+ P    + F + FW+ KP V+R  +P  Y  +++ G  D   V  +  S    L+G+ + P    +D  W ++KR  ++ ++G   S+ P A  +T   G +     +E AR AF + G+S+V+N L+ +W G  + +   E  LG   + N Y TP +SQ FE+HFDWMD  V+Q+ GSK W LY  +V  PRPD++FKP   E+GEP     L  GD++Y+P G  HEA    T    G G             SLH+T GVET + G++ESLL   L V         H L                 G   G G+E +  SA+         +  +  +    ++ L +  +A+ +  LR+ VPL PL   +   R         T  K+ SD             G++   ++ V G    G     A  +E           E +++  A AG+  +++A    G   + L L  +L+DT Q   V + F
Sbjct:   53 TLVRELMDPF-SLQDFAETFWERKPMVIRGRSPNHYDRLVEFGLGDVESVIEKGVS----LSGEGEEPMVLGSD--WNIIKRVFVQADDGP-GSNVPPAPGKTH-AGGADRVVSLEEARKAFHRGGFSVVINRLQRRWRGVLRASRALEHVLGQPVNANLYMTPPQSQGFEAHFDWMDGIVVQLTGSKTWILYHEMVTMPRPDLKFKPKAAELGEPIAVLDLYPGDMMYIPRGWPHEAAVNGTAARPGGGRGASPSSSTARGPSLHVTFGVETALSGTYESLLHHALEVAAV-----EHPL---------------LFGLLPGGGEESDKRSANDSDEDNQGRMGGDAEIPWLQLLHLWVHDVASRDARLRKAVPLAPLFFASSEGR-----PAPATAAKDNSD------------AGSIDDDNINVAGGRREGVCTASAQRQEHQTVAPSAVLQEFKISLEACAGSAAADDAPGVGGAASSTLALLDSLLDTEQLYRVREMF 509          
BLAST of NO09G02770 vs. NCBI_GenBank
Match: XP_005855312.1 (cupin 4 family protein, partial [Nannochloropsis gaditana CCMP526] >XP_005855693.1 cupin 4 family protein, partial [Nannochloropsis gaditana CCMP526] >EKU20669.1 cupin 4 family protein, partial [Nannochloropsis gaditana CCMP526] >EKU21049.1 cupin 4 family protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 161.4 bits (407), Expect = 8.400e-36
Identity = 80/121 (66.12%), Postives = 98/121 (80.99%), Query Frame = 0
Query:  224 EGSKRWRLYDALVDQPRPDMQFKPMTLEVGEPFIDFVLEAGDLLYLPSGLIHEALTEMEDGSGSSSLHLTVGVETTVIGSWESLLLEVLVVVTAAASEGNHDLPSSGAGLRDLRCPSGAAG 345
            EGSKRWRLYDALV+QPRPDMQFKP   ++GEP+IDFVLE GDLLYLPSG IHEAL E + G  +SSLHLTVG+ETTV+GSWESLLLEVL V++  ++E + D+ S+ + +  L+C  G AG
Sbjct:    1 EGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLENSSLHLTVGIETTVLGSWESLLLEVLTVLSGGSAE-DRDVHSAWSNVSALQCSRGPAG 120          
BLAST of NO09G02770 vs. NCBI_GenBank
Match: WP_082459957.1 (MULTISPECIES: hypothetical protein [Mycobacterium])

HSP 1 Score: 137.9 bits (346), Expect = 9.900e-29
Identity = 102/300 (34.00%), Postives = 141/300 (47.00%), Query Frame = 0
Query:   45 LSSLLGPIPGKESFFKEFWQAKPAVMRRHNPTFYRPIMQEGDLDAIL----VHSRTASLMDTLTGDADHPQNKHNDEAWKLVKRIRGENGEF-----WSSSPNASTRTQMLGLSPDATDVEVARAAFVQGYSLVVNHLEDKWHGTAQLALVFEEELGYRTSTNCYFTPARSQAFESHFDWMDAFVLQVEGSKRWRLYD------ALVDQPRPDMQFKPMTLEVGEPFIDFVLEAGDLLYLPSGLIHEALTEMEDGSGSSSLHLTVGVETTVIGSWESLLLEVLVVVTAAASEGNHDLPSS 330
            L+++L P+    +FF   W+ +P V  R+ PTFY  +    D+DA L    +HS         +GD         D A  LVK   GE+        W  +P                D+     A+  GY++++N L+ +W   A L    EE L +  + N YFTP  SQ F  HFD  D F+LQ+ G KRW LYD       L    RP ++      E+G+P  + +LE+GD+LY+P G IHEAL+     +  SSLHLTVGV    +  W  LL E L V  A        +PSS
Sbjct:    7 LATILSPL-DPAAFFSAHWEKRPYVGVRNAPTFYSGLFSVADIDAALQLTCIHS---------SGD---------DVA--LVKAHDGESSTLPLPRAWDGTP----------------DIYALYNAYNSGYTIIINRLQARWGPIAILCRSLEESLRHPVNINLYFTPRHSQGFSPHFDDHDVFILQLAGEKRWLLYDFQSKALPLATADRPVLKD-----EIGQPREEILLESGDVLYIPRGHIHEALS-----TSGSSLHLTVGVN---VFRWVDLLEEALRVAAAENVRLREAVPSS 256          
BLAST of NO09G02770 vs. NCBI_GenBank
Match: WP_082946788.1 (hypothetical protein [Mycobacterium sp. ACS4054])

HSP 1 Score: 137.9 bits (346), Expect = 9.900e-29
Identity = 100/291 (34.36%), Postives = 143/291 (49.14%), Query Frame = 0
Query:   45 LSSLLGPIPGKESFFKEFWQAKPAVMRRHNPTFYRPIMQEGDLDAIL----VHSRTASLMDTLTGDADHPQNKHNDEAWKLVKRIRGENGEFWSSSPNASTRTQMLGLSPDAT-DVEVARAAFVQGYSLVVNHLEDKWHGTAQLALVFEEELGYRTSTNCYFTPARSQAFESHFDWMDAFVLQVEGSKRWRLYDALVDQ-PRPDMQFKPMTLEVGEPFIDFVLEAGDLLYLPSGLIHEALTEMEDGSGSSSLHLTVGVETTVIGSWESLLLEVLVVVTAAASEGNHDLPSS 330
            L +LL P+ G   FF E+W+ +P +  R++P+FY  +    D+D+ L    +HS         +GD         D A  LVK            + +A + T+ +  + D T D+     A+  GY++++N L+ +W   A L+   EE L +  + N YFTP  SQ F  HFD  D F+LQ+ G KRWRLYD   D  P        +  E+G P  + +L  GD+LY+P G IHEAL+     +  SSLHLTVGV    +  W  LL E L V           +PSS
Sbjct:    7 LETLLSPL-GLARFFGEYWEKRPYLGVRNSPSFYSGLFSVADMDSALQLTCIHS---------SGD---------DVA--LVK------------AHDAESSTRSVPRAWDGTPDIYALYDAYNSGYTIIINRLQARWGTIAILSRRLEESLRHPVNVNLYFTPRHSQGFSPHFDDHDVFILQLAGEKRWRLYDFQSDALPLAAADRPVLKDEIGPPRDEHLLSPGDVLYIPRGHIHEALS-----TNGSSLHLTVGVN---VFRWVDLLQEALRVAADENVRLREAVPSS 256          
BLAST of NO09G02770 vs. NCBI_GenBank
Match: XP_005837698.1 (hypothetical protein GUITHDRAFT_161698 [Guillardia theta CCMP2712] >EKX50718.1 hypothetical protein GUITHDRAFT_161698 [Guillardia theta CCMP2712])

HSP 1 Score: 137.1 bits (344), Expect = 1.700e-28
Identity = 89/289 (30.80%), Postives = 139/289 (48.10%), Query Frame = 0
Query:   38 HDDDNTVLSSLLGPIPGKESFFKEFWQAKPA------VMRRHNPTFYRPI-------MQEGDLDAILVHSRTASLMDTLTGDADHPQNKHNDEAWKLVKRIRGENGEFWSSSPNASTRTQMLGLSPDATDVEVARAAFVQGYSLVVNHLEDKWHGTAQLALVFEEELGYRTSTNCYFTPARSQAFESHFDWMDAFVLQVEGSKRWRLYDALVDQPRPDMQFKPMTLEVGEPFID-FVLEAGDLLYLPSGLIHEALTEMED----GSGSSSLHLTVGVETTVIGSWESLL 309
            H+    +   +L P   +  F ++F    PA      ++ R++  ++  I       + E   D + VHS+ A  MD +    D          + LVK+++G++GEFWS      T  +           +       +G++LV+N+ + ++ G    A   E+ LGY    N YFTP  SQ FE HFD M+  VLQ+EGSK W +Y+ ++  PRP+ +FKP   E+       F L  G   +LP G +HEA T           S+SLHLTVG++   + +WES+L
Sbjct:   33 HESVKEIFEVILSPNSTRSFFVRDFENMMPASEQQVVMIARNSRNYFNDIINISSAQIMETFDDCLSVHSQDA--MDEMISGED----------YHLVKKVKGKDGEFWSGRVPGRTHKK-----------DDVIKWMKRGFTLVINNADMRYPGLVGAAQRMEDALGYAVQMNLYFTPPSSQGFEVHFDPMNTLVLQLEGSKTWEVYNPIIALPRPEQKFKPKHKEIHHGSRQTFTLTPGSTFFLPRGWLHEAHTNSSSLPPRSRASASLHLTVGIDAQYV-TWESVL 297          
BLAST of NO09G02770 vs. NCBI_GenBank
Match: WP_069347274.1 (cupin [Scytonema millei] >ODN60446.1 cupin [Scytonema millei VB511283])

HSP 1 Score: 131.3 bits (329), Expect = 9.300e-27
Identity = 89/282 (31.56%), Postives = 127/282 (45.04%), Query Frame = 0
Query:   48 LLGPIPGKESFFKEFWQAKPAVMRRHNPTFYRPIMQEGDLDAILVHSRTASLMDTLTGDADHPQNKHNDEAWKLVKRIRGENGEFWSSSPNASTRTQMLGLSPDATDVEVARAAFVQGYSLVVNHLEDKWHGTAQLALVFEEELGYRTSTNCYFTPARSQAFESHFDWMDAFVLQVEGSKRWRLYDALVDQPRPDMQ--FKPMTLEVGEPFIDFVLEAGDLLYLPSGLIHEALTEMEDGSGSSSLHLTVGVETTVIGSWESLLLEVLVVVTAAASEGNHDLP 328
            +L PI    +FF E+W+ +P V+ R  P +Y  ++   D+D+I+  +                  K+     +LVK          S  P  S +      S    DV     A+ QGYS V+N L ++W   +      E  L +  S N Y TP  S+ F  HFD  + F++QVEGSK WR+YD+ +  P    Q     +T E+  P  +  L AGDLLY+P G IHEA T     S S S+HLT GV    +  W  L+   +  +T         LP
Sbjct:    9 MLSPIE-PATFFNEYWEKRPLVICRSQPDYYCELLSMKDVDSIIRFT------------------KYKLSGVELVKD--------GSKVPPGSGQIGNYVNSDGVPDVNKLYNAYCQGYSFVINGLHERWKPVSVFQRNLEVFLNHPVSINMYMTPKNSRGFAPHFDTHEVFIVQVEGSKLWRIYDSPITLPVLSNQKDLPKLTNELSTPVTEICLNAGDLLYIPRGYIHEACT-----SESFSIHLTAGVH---VFRWSDLMTNAIAALTEQDVRFRQSLP 255          
BLAST of NO09G02770 vs. NCBI_GenBank
Match: PIW31447.1 (hypothetical protein COW29_01755 [Rhodobacterales bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_59_13])

HSP 1 Score: 129.8 bits (325), Expect = 2.700e-26
Identity = 92/290 (31.72%), Postives = 126/290 (43.45%), Query Frame = 0
Query:   38 HDDDNTVLSSLLGPIPGKESFFKEFWQAKPAVMRRHNPTFYRPIMQEGDLDAILVHSRTASLMDTLTGDADHPQNKHNDEAWKLVKRIRGENGEFWSSSPNASTRTQMLGLSPDATDVEVARAAFVQGYSLVVNHLEDKWHGTAQLALVFEEELGYRTSTNCYFTPARSQAFESHFDWMDAFVLQVEGSKRWRLYDALVDQPRPDMQFKPMTLEVGEPFIDFVLEAGDLLYLPSGLIHEALTEMEDGSGSSSLHLTVGVETTVIGSWESLLLEVLVVVTAAASEGNHDLP 328
            H     VL   +GP  G E FFK +++ K  ++ R  P  Y  ++    LD +L  SR     D     AD P                              TR Q L LS    D       + +G +L++ HL     G        E        TN Y TP  +Q F +H+D  D FVLQVEG K WRLYD  VD+P     F P  ++ GE   +FVL+AGD  Y+P GL+H+A  +      + SLH+TVG+   ++ +W  L+LE +  V     E    LP
Sbjct:    9 HPWGQDVLEYCIGP-SGAEDFFKSYFEQKALIVSRDEPDRYNELLSVARLDTLLA-SRDFHGDDVDMARADPP-----------------------------ITRDQFL-LSNGFADRGAIANLYQEGGTLILPHLHQADLGLKSFCRAIESVFTSHVQTNIYLTPPNNQGFRTHYDDHDVFVLQVEGEKLWRLYDQSVDKPFRGEGFNPEHVQPGELVEEFVLKAGDSAYVPRGLMHDAQAQ----GAADSLHITVGM---IVKTWADLMLEAVSEVALRHPEFRQSLP 259          
BLAST of NO09G02770 vs. NCBI_GenBank
Match: WP_092822936.1 (hypothetical protein [Rhodospirillales bacterium URHD0017])

HSP 1 Score: 125.6 bits (314), Expect = 5.100e-25
Identity = 78/254 (30.71%), Postives = 125/254 (49.21%), Query Frame = 0
Query:   45 LSSLLGPIPGKESFFKEFWQAKPAVMRRHNPTFYRPIMQEGDLDAILVHSRTASLMDTLTGDADHPQNKHNDEAWKLVKRIRGENGEFWSSSPNASTRTQMLGLSPDATDVEVARAAFVQGYSLVVNHLEDKWHGTAQLALVFEEELGYRTSTNCYFTPARSQAFESHFDWMDAFVLQVEGSKRWRLYDALVDQPRPDMQFKPMTLEVGEPFIDFVLEAGDLLYLPSGLIHEALTEMEDGSGSSSLHLTVGVET 299
            L+ L+ P+P ++ F    W+ KP  ++R  P +   +    D+D IL   +TA+                ND     V  ++ E G+        S    +   +  A +V     A+  GY++V+N L  +W   A L     ++LG+  + N Y TPA +Q FE+H D  + FVLQ++G KRW ++      P   ++ +     +G+  +   LEAGDLLY+P G IH A T     +G+SSLHLT+GV++
Sbjct:   15 LAQLISPLPARD-FMARHWEKKPLHVKRSLPAWAARLASVHDVDVILATGKTAA----------------ND-----VNLVKTEGGK--------SVHADVPRGADGAPNVAAISQAYADGYTVVLNSLHRRWPAVAALRAALSDDLGHAINMNLYLTPAGAQGFEAHMDGHEVFVLQLDGPKRWEVFKPNYRLP---LESRLADGALGKAVLSPELEAGDLLYIPRGFIHRAHT-----TGASSLHLTIGVQS 230          
BLAST of NO09G02770 vs. NCBI_GenBank
Match: WP_002771816.1 (cupin [Microcystis aeruginosa] >CCI04793.1 Cupin 4 family protein [Microcystis aeruginosa PCC 9443])

HSP 1 Score: 124.8 bits (312), Expect = 8.700e-25
Identity = 79/253 (31.23%), Postives = 124/253 (49.01%), Query Frame = 0
Query:   48 LLGPIPGKESFFKEFWQAKPAVMRRHNPTFYRPIMQEGDLDAILVHSRTASLMDTLTGDADHPQNKHNDEAWKLVKRIRGENGEFWSSSPNASTRTQMLGLSPDATDVEVARAAFVQGYSLVVNHLEDKWHGTAQLALVFEEELGYRTSTNCYFTPARSQAFESHFDWMDAFVLQVEGSKRWRLYDALVDQPR-PDMQF-KPMTLEVGEPFIDFVLEAGDLLYLPSGLIHEALTEMEDGSGSSSLHLTVGVET 299
            +L PI  K +FF E+W+ +P ++ R  P +Y  ++   D+D+I + S  ++L D                  +++K    EN  F   +PN     Q L              A+ QGY+L V  + ++W   + L    +    +    N Y +P  SQ F++HFD  + F++QVEGSK WR+YD+ +  P   D+++ + +  ++  P   F L AGDLLY+P G IHE  T     S S S HLTV + T
Sbjct:    7 ILNPIDTK-TFFSEYWEKRPCLISRTEPDYYSHLLSLKDIDSI-IRSYGSNLSDV-----------------EVIK----ENSYF---TPNGVVNAQQL------------YQAYSQGYTLRVRKISERWQPISDLRTKLQVFFNHPVLINLYMSPKNSQGFQAHFDTHEVFIVQVEGSKNWRIYDSPITLPLISDLKYQEKLRNQLTSPVTAFTLNAGDLLYIPRGYIHEVFT-----SDSFSTHLTVAIHT 216          
The following BLAST results are available for this feature:
BLAST of NO09G02770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27518.12.400e-15553.72cupin 4 family protein [Nannochloropsis gaditana][more]
CBJ27173.13.400e-3729.22mina protein [Ectocarpus siliculosus][more]
XP_005855312.18.400e-3666.12cupin 4 family protein, partial [Nannochloropsis g... [more]
WP_082459957.19.900e-2934.00MULTISPECIES: hypothetical protein [Mycobacterium][more]
WP_082946788.19.900e-2934.36hypothetical protein [Mycobacterium sp. ACS4054][more]
XP_005837698.11.700e-2830.80hypothetical protein GUITHDRAFT_161698 [Guillardia... [more]
WP_069347274.19.300e-2731.56cupin [Scytonema millei] >ODN60446.1 cupin [Scyton... [more]
PIW31447.12.700e-2631.72hypothetical protein COW29_01755 [Rhodobacterales ... [more]
WP_092822936.15.100e-2530.71hypothetical protein [Rhodospirillales bacterium U... [more]
WP_002771816.18.700e-2531.23cupin [Microcystis aeruginosa] >CCI04793.1 Cupin 4... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR022ncniR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR129ngnoR129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02770.1NO09G02770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588571gene_4271Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02770.1NO09G02770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02770 ID=NO09G02770|Name=NO09G02770|organism=Nannochloropsis oceanica|type=gene|length=1872bp
ACCTCAGGACCCGCGACTCATCGCTTCCTTGACGATAATGAAGCGGAAAA
GAGCAATGAGAGCAATAATGGTGCTTTTTGTAGCCTTTCCCACCATCTCA
GTCGCCGCGGCCGCAGAGGACCAGCACTATCAACACCCATCGCACGCGCA
CGACGACGACAATACTGTGCTTTCCTCTTTGCTAGGTCCTATTCCTGGGA
AGGAATCTTTCTTCAAAGAGTTCTGGCAGGCGAAACCGGCCGTCATGCGC
CGACACAACCCGACTTTTTACCGACCCATTATGCAGGAAGGCGATCTGGA
CGCTATCTTGGTGCACAGCAGGACCGCATCTCTCATGGACACTTTGACCG
GAGACGCAGACCATCCTCAGAACAAACATAATGACGAAGCATGGAAACTT
GTCAAGCGCATCAGAGGTGAAAATGGAGAGTTTTGGTCCAGCAGCCCCAA
CGCCTCGACACGCACACAAATGCTAGGCCTGTCCCCTGACGCGACCGATG
TGGAAGTGGCGCGCGCCGCATTTGTCCAGGGGTATTCGTTGGTGGTGAAC
CATCTCGAGGACAAATGGCACGGTACGGCTCAACTTGCATTGGTATTTGA
GGAAGAGCTTGGCTATCGCACGTCGACCAACTGCTACTTCACCCCTGCCC
GAAGTCAAGCATTTGAATCTCATTTTGATTGGATGGACGCGTTTGTCCTC
CAGGTGGAAGGGTCCAAGCGCTGGCGGCTATACGATGCCTTGGTAGACCA
GCCCCGGCCAGACATGCAATTTAAGCCGATGACACTGGAGGTTGGAGAGC
CTTTTATTGACTTTGTCCTGGAAGCTGGCGATCTGTTGTATTTGCCGTCG
GGTTTGATCCACGAGGCCCTCACCGAGATGGAGGACGGGTCGGGGTCCTC
TTCCCTACATCTGACGGTTGGCGTGGAGACTACTGTAATAGGATCGTGGG
AATCTTTGTTGTTGGAAGTGTTGGTGGTGGTTACGGCTGCTGCCAGCGAG
GGCAACCACGATCTTCCTTCGTCTGGGGCGGGCTTGAGGGATTTGCGGTG
CCCGAGTGGGGCAGCAGGTGAGAGGGATGGAGAGGGCAAGGAGCACGAGA
TGGAGAGTGCATCGGCCATGATGTCGGTTTTCATGTCAGCCATTATGACT
GAGGAGGGGCTGCGACTAGGCGATATGGTGGCTCTCACGCTGACACACCT
GGCCACGCATGAAAGGGTGTTGCGTCGGCCGGTTCCCCTAACGCCGTTGA
TGAAGCGAACCAAGAGTAGGCGCCGTTTGGGTCAGCTTAAAGAGTTGGTA
ACTCTGGTTAAGGAGAAATCAGATATCCAGGGCGCTTGGGAATGGTTTAT
GCAGAAACATAAGGGCACCGTGCCACGAAGTCTTGCTGTCTTCGGGAAGA
ATTTCGGGGGCGCCGACCGGAAGGAGGCAGCTGGAAAAGAGATGGAGCGA
CGTCTTGCCACCGCCGCAGCGGCAGGAACGGTGTTATCGGAAGAAGCTAA
GCAGGGGGTTCACGATGCTTTACTGTGTTTGGAAAAAGCCTTAGTGGACA
CGGTGCAAGCGAAGGCTGTCTTGAAGCATTTTGATAGTGTGTGTCAGCAG
GATTTGGCTACATATCAGCAGCAGCGGAAAGGTATCTTGGAGCAAGGTGT
GTGGCAAGCAGACATTGCTGCGGTGGATGGACAGGTGGATGGACCGCAAG
TGTATGGTGTGGGTTCACATGCCACTACGTTTGCTGGTGTGTCGAGTGTG
TCGTAGCGTGGGAGGTTACGAGGGAGGAAAGACGGCATCTTTGAATATAT
TCCAAAGCTAGAAAAAGTGCGAATTTTAAACATCCAGAGCAGCAATGGAC
ATAAATATGTATTTCTATGCAA
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protein sequence of NO09G02770.1

>NO09G02770.1-protein ID=NO09G02770.1-protein|Name=NO09G02770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=573bp
MKRKRAMRAIMVLFVAFPTISVAAAAEDQHYQHPSHAHDDDNTVLSSLLG
PIPGKESFFKEFWQAKPAVMRRHNPTFYRPIMQEGDLDAILVHSRTASLM
DTLTGDADHPQNKHNDEAWKLVKRIRGENGEFWSSSPNASTRTQMLGLSP
DATDVEVARAAFVQGYSLVVNHLEDKWHGTAQLALVFEEELGYRTSTNCY
FTPARSQAFESHFDWMDAFVLQVEGSKRWRLYDALVDQPRPDMQFKPMTL
EVGEPFIDFVLEAGDLLYLPSGLIHEALTEMEDGSGSSSLHLTVGVETTV
IGSWESLLLEVLVVVTAAASEGNHDLPSSGAGLRDLRCPSGAAGERDGEG
KEHEMESASAMMSVFMSAIMTEEGLRLGDMVALTLTHLATHERVLRRPVP
LTPLMKRTKSRRRLGQLKELVTLVKEKSDIQGAWEWFMQKHKGTVPRSLA
VFGKNFGGADRKEAAGKEMERRLATAAAAGTVLSEEAKQGVHDALLCLEK
ALVDTVQAKAVLKHFDSVCQQDLATYQQQRKGILEQGVWQADIAAVDGQV
DGPQVYGVGSHATTFAGVSSVS*
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Synonyms
Publications