NO09G02720, NO09G02720 (gene) Nannochloropsis oceanica

Overview
NameNO09G02720
Unique NameNO09G02720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length954
Alignment locationchr9:804677..805630 -

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Properties
Property NameValue
DescriptionPresenilin-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:804677..805630 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016485protein processing
GO:0016485protein processing
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004190aspartic-type endopeptidase activity
GO:0004190aspartic-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR001108Peptidase_A22A
IPR006639Preselin/SPP
Homology
BLAST of NO09G02720 vs. NCBI_GenBank
Match: EWM27520.1 (presenilin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 310.8 bits (795), Expect = 4.800e-81
Identity = 206/328 (62.80%), Postives = 220/328 (67.07%), Query Frame = 0
Query:    1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGR-----TGGIAVAA--DTRVEGMQRTDLQTPVRDVSREDGG-PAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVG-GTPQEEGDAE-GSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPE-ERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSLPLYV 318
            MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPL+YLVGLMQE + P MPGLLYEAELP HARHHHR+PP    R     TG +A A   D   EG     LQ PV D    DG    A+     A ++H  +PPSPLDPLLD + SSPGG HL                            +LLE G G+P E G+   G  ER  XXXXX        LSS          G PE ERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVII+GLGATLVLLSVFRKALPALPISIGLGVLFYLLTRV IIPYIDALVS P+YV
Sbjct:  214 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEP-MPGLLYEAELPGHARHHHRIPPSTALRGSERATGALASAGSLDGGCEG-DDVRLQAPVGD----DGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHL------GQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGESERXXXXXXXRGHGPSEGLSSSSHHQG----GTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTPIYV 525          
BLAST of NO09G02720 vs. NCBI_GenBank
Match: GAX28476.1 (presenilin 1 [Fistulifera solaris])

HSP 1 Score: 173.7 bits (439), Expect = 9.100e-40
Identity = 127/330 (38.48%), Postives = 166/330 (50.30%), Query Frame = 0
Query:    1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPV-RDVSREDGGPAALIP------------SGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSLPLYV 318
            +AW LS F++WT W LL++LALYDLCAVLTPCGPLK+LV  M +  +P MPGLL+EAELP  A+       P+    G   +AA      ++R+    PV + +      P   IP            S P+SS+    P    D +  +S      D                               +   G     E D  G  +R           A+            G    PE+ SI+LGLGDF+FYSVLV KAA Y FAT AAC LVI++GLG TLVLLSV+  ALPALPISI +G++FY+LTR  I P+++A++  P YV
Sbjct:  234 LAWHLSFFDDWTAWTLLLMLALYDLCAVLTPCGPLKFLVEAMSQEGSPEMPGLLFEAELPPEAKR------PVGSSRGRANIAAS--ASDVERSAPPNPVSQPMDGSSESPRVKIPLAIAKVYQLPVVSIPSSSMSIMFPDRSSDTIGTTSPLLTNSDSTVILPENPTAEQLLAKVVVRLPAHGGRLEHVQRRGKKVYLERDRHGVPKRYLWVDRNGKVFAE---------MKDGDEEKPEKNSIRLGLGDFIFYSVLVAKAAQYSFATFAACILVILAGLGGTLVLLSVYHHALPALPISIFMGIVFYVLTRWFIEPWVEAVLEKPYYV 546          
BLAST of NO09G02720 vs. NCBI_GenBank
Match: GAX09612.1 (presenilin 1 [Fistulifera solaris])

HSP 1 Score: 161.8 bits (408), Expect = 3.600e-36
Identity = 119/316 (37.66%), Postives = 150/316 (47.47%), Query Frame = 0
Query:    1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGG----PAALIP------------SGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTR 301
            +AW LS F++WT W LL++LALYDLCAVLTPCGPLK+LV  M +  +P MPGLL+EAELP  A+           R GG +             +   P   +S+   G    P   IP            S P+SS+    P    D +  +S      D                               +   G     E D  G  +R           A+            G    PE+ SI+LGLGDF+FYSVLV KAA Y FAT AAC LVI++GLG TLVLLSV+  ALPALPISI +G++FY+ TR
Sbjct:  233 LAWHLSFFDDWTAWTLLLMLALYDLCAVLTPCGPLKFLVEAMSQEGSPEMPGLLFEAELPPEAK-----------RPGGSSRGRANIAASASDVERSAPSNPISQPTDGLSESPRVKIPLAIAKVYQLPVVSIPSSSMSIMFPDRNSDTIGTTSPLLTNSDSTIILPDNPSAEQLLAKVVVRLPAHGGRLEHVQRRGKKVYLERDRHGVPKRYLWVDRNGKVFAE---------MKDGDEEKPEKNSIRLGLGDFIFYSVLVAKAAQYSFATFAACILVILAGLGGTLVLLSVYHHALPALPISIFMGIVFYVFTR 528          
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_002176847.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51310.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 156.0 bits (393), Expect = 2.000e-34
Identity = 118/317 (37.22%), Postives = 147/317 (46.37%), Query Frame = 0
Query:    1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSLPLYV 318
            +AW LS F++WT W LL++LALYDLCAVLTPCGPLK LV LM + D+P MPGLL+EAELP  A+           R GG      +R +    T+ Q                                       +SH    G                                   V  T Q++       + GN                                SI+LGLGDF+FYSVLV KAA Y FAT AAC LVI++GLG TLVLLSV+  ALPALPISI LGV+FY+LTR  + P+I+A+++ P YV
Sbjct:  103 LAWHLSYFDDWTTWTLLMMLALYDLCAVLTPCGPLKALVNLMSQDDSPDMPGLLFEAELPPEAK-----------RPGG----KKSRPDNSAETNSQV--------------------------------------TSHQEGSG----------------------------------LVKSTEQQD-------QAGNDG----------------------------HNSIRLGLGDFIFYSVLVAKAAQYSFATFAACLLVILAGLGGTLVLLSVYHSALPALPISIFLGVIFYILTRWSVEPWIEAILTRPYYV 297          
BLAST of NO09G02720 vs. NCBI_GenBank
Match: CBN74004.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 140.6 bits (353), Expect = 8.500e-30
Identity = 138/355 (38.87%), Postives = 152/355 (42.82%), Query Frame = 0
Query:    1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPA-----HARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGD--AEGSGER-GNXXXXXXSGTADYPL--SSXXXXXXXGGRGAPEERSIKL-----------------------------GLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSLPLY 317
            MAWQLSRFEEWTGW LLVVLALYDLCAVLTPCGPLK LV LMQE + P MPGLLYEAELPA                                                                                            XXXXXXXXXXX                 L+E G      GD  A+GSG R G         T    +           G R    E+ ++L                                DFVFYSVLV KAALYGF   AAC +VI+ GLGATLVLL+V+R ALPALPISIG G +FYLLTR  I PY++AL   PLY
Sbjct:  228 MAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEP-MPGLLYEAELPAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADSAGASESVAAPLLELVESGTAAVAVGDASADGSGTRSGREQGKRRLATVRRGIRGGGCLDPEPPGWRTVQAEKKLELFSPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNETPLY 581          
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_002288037.1 (presenilin, partial [Thalassiosira pseudonana CCMP1335] >EED95480.1 presenilin, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 140.6 bits (353), Expect = 8.500e-30
Identity = 110/306 (35.95%), Postives = 149/306 (48.69%), Query Frame = 0
Query:    1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPY 307
            +AWQLS F+  + W LL++LALYDLCAVLTP GPL+ LV LM + D+P MPGLLYEA++P   +      P + GR        D   EG      Q+P   +S E     ++  +G       +   S  D       S+PG +                             +   +     Q E +A  + +         + TA  P +                 +IKLGLGDF+FYSVLV K+A Y FA   + FLV+++GLG TLVLL+VF+ ALPALPISI L V FY+ TR +I P+
Sbjct:  113 IAWQLSHFDTISTWTLLIMLALYDLCAVLTPVGPLRLLVNLMSDEDSPEMPGLLYEAQIPEGLKR-----PVMGGRN-----KDDNGDEGEHDDSSQSPPASMSAERYQQPSIKENGVPGRTSSDVSASQGD------DSAPGVE--------------------MSSAVNRTRNDSYDSVTLDQSENNATTTPDLAPAHASSSAKTAMIPFAIAELF----------SNTIKLGLGDFIFYSVLVAKSAQYSFACFVSSFLVVLAGLGGTLVLLAVFKHALPALPISIFLAVTFYVFTRFIIEPW 372          
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_008615248.1 (hypothetical protein SDRG_11008 [Saprolegnia diclina VS20] >EQC31407.1 hypothetical protein SDRG_11008 [Saprolegnia diclina VS20])

HSP 1 Score: 138.7 bits (348), Expect = 3.200e-29
Identity = 117/319 (36.68%), Postives = 155/319 (48.59%), Query Frame = 0
Query:    1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARH------HHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSL 314
            MAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPLK LV L+Q    P +PGLLYEAE+     H       H  P P +  T     A+D      +R+  Q    +   ++     L+P  P +       PS  D L+ + +++   D L                            ++L +      EGD     ER             Y L +             E+ +IKLGLGDFVFYSVLV +AALY  A   AC + I+ GLG TL LL + ++ALPALPISI LGV  Y+  R V+  +++  ++L
Sbjct:  192 MAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQSEGRP-LPGLLYEAEVQTRFDHSEPNYYQHGGPLPAITTT---TTASDVCSFARRRSKPQDEDEESLEKEAQTEPLLPPQPVAK---KPKPSVRDRLV-AFYTAYNPDALS------------------------RIDNILAM--YEGREGDLWRDLER------------KYGLDTDD----------EEDNTIKLGLGDFVFYSVLVSRAALYDVAAMWACAVAILVGLGGTLFLLGIHKQALPALPISILLGVAVYVWMRCVLFEFMNVTLAL 454          
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_012196195.1 (hypothetical protein SPRG_02256 [Saprolegnia parasitica CBS 223.65] >KDO33449.1 hypothetical protein SPRG_02256 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 138.7 bits (348), Expect = 3.200e-29
Identity = 117/317 (36.91%), Postives = 154/317 (48.58%), Query Frame = 0
Query:    1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARH----HHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALVSL 314
            MAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPLK LV L+Q    P +PGLLYEAE+     H    +++   PL   T     A+D      +R+  Q    D    +     L+P  P   L    P + +   L + +++   D LD                           S+L +      EGD     ER             Y L +             E+ +IKLGLGDFVFYSVLV +AALY  +   AC + I+ GLG TL LL + ++ALPALPISI LGV  Y   R V+  +++  ++L
Sbjct:  192 MAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQSEGRP-LPGLLYEAEVQTRFDHTEPKYYQHGGPLPSVTATATTASDVCSFARRRSKPQDEDDDSLETEAQTEPLLP--PPVVL---KPKTSVRDRLVAFYTAYNPDALD------------------------RVDSILAM--YEGREGDLWRDLER------------KYGLDTDD----------EEDNTIKLGLGDFVFYSVLVSRAALYDVSAMWACAVAILMGLGGTLFLLGIHKQALPALPISILLGVAVYFWMRCVLFDFMNMTLAL 454          
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_008862967.1 (hypothetical protein H310_01595 [Aphanomyces invadans] >ETW09162.1 hypothetical protein H310_01595 [Aphanomyces invadans])

HSP 1 Score: 136.7 bits (343), Expect = 1.200e-28
Identity = 113/311 (36.33%), Postives = 144/311 (46.30%), Query Frame = 0
Query:    1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALV 312
            MAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPLK LV L+Q+   P +PGLLYEAE+      H     P   + GG       +  G Q T   T  R    +   P     S   +S        PL   L + ++                                      E   +  E  D   +   G          A Y                 ++ +IKLGLGDFVFYSVLV +AA++      AC + I+ GLG+TL LLSV++KALPALPISI LGV  YL  R V++ ++D+ V
Sbjct:  196 MAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQQEGRP-LPGLLYEAEV--QRTFHSDAHSPSYYQRGG--PPCPEQATGTQTTCTFTRRRSRPDDSHEPLLAAASSTDTSEMTTTAKLPLRDRLVAFYN--------------------------------------EYNPSAIERVDQVLAIYEGRERDLWNDLAAKYGPHDDD----------EDDNTIKLGLGDFVFYSVLVSRAAMFDVMAMIACLVSILMGLGSTLFLLSVYKKALPALPISILLGVAIYLWVRFVLVDFMDSTV 453          
BLAST of NO09G02720 vs. NCBI_GenBank
Match: XP_008862968.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW09163.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 136.7 bits (343), Expect = 1.200e-28
Identity = 113/311 (36.33%), Postives = 144/311 (46.30%), Query Frame = 0
Query:    1 MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTMPGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPVRDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLEVGGTPQEEGDAEGSGERGNXXXXXXSGTADYPLSSXXXXXXXGGRGAPEERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVVIIPYIDALV 312
            MAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPLK LV L+Q+   P +PGLLYEAE+      H     P   + GG       +  G Q T   T  R    +   P     S   +S        PL   L + ++                                      E   +  E  D   +   G          A Y                 ++ +IKLGLGDFVFYSVLV +AA++      AC + I+ GLG+TL LLSV++KALPALPISI LGV  YL  R V++ ++D+ V
Sbjct:  188 MAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQQEGRP-LPGLLYEAEV--QRTFHSDAHSPSYYQRGG--PPCPEQATGTQTTCTFTRRRSRPDDSHEPLLAAASSTDTSEMTTTAKLPLRDRLVAFYN--------------------------------------EYNPSAIERVDQVLAIYEGRERDLWNDLAAKYGPHDDD----------EDDNTIKLGLGDFVFYSVLVSRAAMFDVMAMIACLVSILMGLGSTLFLLSVYKKALPALPISILLGVAIYLWVRFVLVDFMDSTV 445          
The following BLAST results are available for this feature:
BLAST of NO09G02720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27520.14.800e-8162.80presenilin-like protein [Nannochloropsis gaditana][more]
GAX28476.19.100e-4038.48presenilin 1 [Fistulifera solaris][more]
GAX09612.13.600e-3637.66presenilin 1 [Fistulifera solaris][more]
XP_002176847.12.000e-3437.22predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBN74004.18.500e-3038.87conserved unknown protein [Ectocarpus siliculosus][more]
XP_002288037.18.500e-3035.95presenilin, partial [Thalassiosira pseudonana CCMP... [more]
XP_008615248.13.200e-2936.68hypothetical protein SDRG_11008 [Saprolegnia dicli... [more]
XP_012196195.13.200e-2936.91hypothetical protein SPRG_02256 [Saprolegnia paras... [more]
XP_008862967.11.200e-2836.33hypothetical protein H310_01595 [Aphanomyces invad... [more]
XP_008862968.11.200e-2836.33hypothetical protein, variant [Aphanomyces invadan... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR022ncniR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR129ngnoR129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010795NSK010795Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02720.1NO09G02720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588587gene_4276Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02720.1NO09G02720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02720 ID=NO09G02720|Name=NO09G02720|organism=Nannochloropsis oceanica|type=gene|length=954bp
ATGGCCTGGCAGTTGTCGAGGTTCGAGGAATGGACAGGCTGGGCCTTGTT
GGTGGTCTTGGCCCTGTATGATTTATGTGCCGTGCTTACACCCTGTGGAC
CATTGAAGTATTTGGTAGGGTTGATGCAAGAGCGCGACGCTCCTACCATG
CCTGGTCTGCTCTACGAGGCGGAGTTGCCTGCTCATGCACGGCACCATCA
CAGGGTGCCGCCTCCACTCGTTGGGAGGACAGGAGGAATAGCAGTAGCAG
CAGACACAAGGGTGGAAGGAATGCAAAGAACGGATCTACAGACGCCTGTG
CGCGATGTGAGTAGGGAAGATGGGGGGCCTGCGGCGTTGATACCTTCGGG
CCCGGCGAGCAGCTTGCATTGCAACAATCCGCCTTCTCCTCTCGATCCGC
TGTTGGACAGTTCGCACAGCAGCCCGGGTGGAGATCATCTCGACCGTCGC
CACCGTCACCATCAGCAGCAGCAACAGCCACACAAACAACAACAACAGCA
GTTGCGGGGAGGTCGGATCAATTCTAGCTTGCTCGAAGTAGGGGGTACTC
CACAGGAGGAGGGGGATGCGGAGGGTAGTGGCGAACGAGGAAATGGAGGG
GTGGGCGGAAACAGTGGCACGGCTGACTATCCTTTATCGTCGTCCTCCTC
GCAGGAGCACCACGGAGGAAGAGGAGCGCCGGAGGAGCGAAGCATTAAGC
TGGGCTTGGGGGATTTTGTTTTTTACAGTGTTCTGGTGGGCAAGGCGGCT
TTGTATGGGTTTGCGACTTGCGCGGCCTGTTTCCTCGTCATTATTTCGGG
CTTGGGCGCAACACTTGTGTTGCTGAGTGTCTTTCGAAAGGCGCTGCCGG
CATTGCCGATTTCGATTGGCCTCGGCGTGCTGTTTTATTTGCTTACGCGC
GTTGTTATCATTCCGTACATCGATGCCTTGGTCAGTTTACCTCTTTACGT
CTAG
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protein sequence of NO09G02720.1

>NO09G02720.1-protein ID=NO09G02720.1-protein|Name=NO09G02720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=318bp
MAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLKYLVGLMQERDAPTM
PGLLYEAELPAHARHHHRVPPPLVGRTGGIAVAADTRVEGMQRTDLQTPV
RDVSREDGGPAALIPSGPASSLHCNNPPSPLDPLLDSSHSSPGGDHLDRR
HRHHQQQQQPHKQQQQQLRGGRINSSLLEVGGTPQEEGDAEGSGERGNGG
VGGNSGTADYPLSSSSSQEHHGGRGAPEERSIKLGLGDFVFYSVLVGKAA
LYGFATCAACFLVIISGLGATLVLLSVFRKALPALPISIGLGVLFYLLTR
VVIIPYIDALVSLPLYV*
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Synonyms
Publications