NO09G02500, NO09G02500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02500 vs. NCBI_GenBank
Match: XP_002185765.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65235.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 112.5 bits (280), Expect = 5.600e-21 Identity = 176/738 (23.85%), Postives = 284/738 (38.48%), Query Frame = 0 Query: 16 LLVHFLAVCTHAFQSLRALKCPLVTQLSNAHSSS----------WSSTDTET---RPERETVIKSASSQPSQAPQTPPKRQPWRRLGSFETLLARKAAAGPQRLSI-----PHVCVAVVDDEQGLLNARLLKPALVSLVRRHPKLRACIQGTGKVEGAPVAGVRRGGREVDPLMWWPCAMTPEEVVEEALSFDDGSSSSSINDDAQDSPFFFSVSFQAALDNTD-MDSSRGPLWRLHVMRSQGSRKGTKPAGPGGVGQVALLFIFNHAISDQVSCNTLIHELLSTLGEXXXXXXXXXXXXXXXXXQPFPPSIEKAILGPARA-------TVSFTTALYAARECLFGLLPTTLYPTXXXXXXXXXXXXXXXTIP------PPLPAANRRTICVFRREEPSRLSLLKEECKKRGVTVTAALSAAMLYATSDLAHGEEEEGRAEGVRNGKEHNYRFLLSLNMRTFSRRKLGGGTEGGEGEKEKXXXXXXGEEDWEENAVASAAGAMDFMV-RLQERQGRNLLCTHKSTTSKNGTVAATAATAPGAPRPHVAGEEAFWLLAKQCRREFLDFVSAGFVPESVNLFDWGMQTLELNEVVEKEAENPKTLGRAYTCGVSNMGVFEDGMGGGRRRGSNRSSNGSRGMDEDFSLSSSAFSSCLPSYGSLRLHGIHYATSHSLTGSLYQLSCGTVNGALCLTFHYPWPLVDREMANRFADRVVQILRCIGWGERTEGGREGGRDREEE 721 LL++ HAF L +TQ SN +S ++S ET RP T +A++ Q ++ R LGS E L+ + GP+R + HV A++ + +L+ AL + ++ HP L + G G+ + + + R+ +P PC E + AL S + +A D + SF LD+ D+++GPLW++ + R+ S G ALLF FNHAISDQ S N L+ ++L + E Q P ++E +++G +R V T Y + GL + P I + +RR+ FR S L +C++ GV+++ AL+AA +D+ G K NY+ L SL+MR + G + +GE +VA AG+MD M+ L +R GR L T+ T + T+ FW LA++ + AE+ GRAY+ G++N+GV+E R + S + L +G ++ I +AT+H+ +G LY SC TV+G+L +TF+ P+V + FAD V++L + G +G ++EE Sbjct: 15 LLLYLATSIGHAFAPRSVLTLRRITQPSNPRQASSTDADDGGMFFASASDETLLARPGNATNDDAATADAGQVNNQSSRQS--RVLGSQELLMLPR-QYGPKRDKVIFPQMNHVSCAIL---SATPSDTVLQKALDAAMQAHPLLHCRVDGDGEPDKR--IDLFQMVRQGEPN---PCTFVSEPNLFSALDVLKVIDVPSTDREALDQS--WQKSFNKNLDDGSWCDAAKGPLWKVELHRTASSS-----------GPCALLFSFNHAISDQSSANRLLDQILRNVAE-----LESLGSTTPAIPQTMPLALEDSVMGVSRRWSDVQMDGVGTDTIRYVVNKAAEGLRNPVIVPDSAGRKEGSNPLNALTIISGRAAGGQDNESQSRRSTLQFRSLSRESTSALLAKCRENGVSISNALTAAAALTATDVID--------NGKPKRKSRNYKVLQSLDMRRY-------GAKLDQGE-----------------SVACMAGSMDLMLGPLADRSGRTLKQTY---TPEAATI--------------------FWNLARE---------------------------------IHLTAESKDNKGRAYSAGITNVGVYESQEAFAR-------------------IDQSEPAVLLVEHGKYKIQDIFFATTHTRSGCLYPASCITVDGSLKMTFNPVAPIVSDKTNANFADGFVELLEIVA------GVSQGTIKKDEE 610
BLAST of NO09G02500 vs. NCBI_GenBank
Match: EJK59913.1 (hypothetical protein THAOC_19818 [Thalassiosira oceanica]) HSP 1 Score: 107.8 bits (268), Expect = 1.400e-19 Identity = 131/511 (25.64%), Postives = 193/511 (37.77%), Query Frame = 0 Query: 107 SIPHVCVAVVDDEQGLLNARLLKPALVSLVRRHPKLRACIQGTGKVEGA--PVAGVRRGGREVDPLMWWPCAMTPEEVVEEALSFDDGSSSSSINDDAQDSPFFFSVSFQAALDNTDM--DSSRGPLWRLHVMRSQGSRKGTKPAGPGGVGQVALLFIFNHAISDQVSCNTLIHELLSTLGEXXXXXXXXXXXXXXXXXQPFPPSIEKAILG-------PARATVSFTTALYAARECLFGLL-PTTLYPTXXXXXXXXXXXXXXXTIPPPLPA----ANRRTICVFRREEPSRLSLLKEECKKRGVTVTAALSAAMLYATSDLAHGEEEEGRAEGVRNGKEHNYRFLLSLNMRTFSRRKLGGGTEGGEGEKEKXXXXXXGEEDWEENAVASAAGAMDFMV-RLQERQGRNLLCTHKSTTSKNGTVAATAATAPGAPRPHVAGEEAFWLLAKQCRREFLDFVSAGFVPESVNLFDWGMQTLELNEVVEKEAENPKTLGRAYTCGVSNMGVFE 601 S+ HV V + + L A+ + HP LR ++G G+ + VRRG PC D +I D +D + +F +D+ +S GPLW+L + R + ALLF NHAISDQ S N L+ +++S + Q P ++E ++LG + T Y A + G P L T TI RRT FR S L + C+ GV+VT AL+AAM +D G E + GK+ NY+ L SL+MR F GE+ + VA AG+ D M+ L +R G S S+ + FW LAK+ + + DFV +G +V +FD+ M ++N +V+ A++ +LGRAY+ GVSN GV+E Sbjct: 108 SMSHVTVTTLSATPSI---EALSDAIEIAMDTHPLLRCHVEGDGEPDERIDLFKMVRRGEPN-------PCTFVAPNA--NPFKATDVLEVVNIEGDDEDLRRSWQENFNNGIDDGSWYESASIGPLWKLTLHRLGNETSSSD-------SPCALLFSSNHAISDQGSVNVLMDQIISDVAS----IESDGGVSNKPTVQGMPMAMEDSVLGLNNRWSDVQTGGIEVDTIKYVAGKAAEGFRGPVILPDTDEEASGGDSLAGALSTISGKSAGGESKVQRRTTLQFRNLSEQTTSKLLQSCRANGVSVTNALTAAMSLTATDFIDGGCE-------KEGKKRNYKVLQSLDMRRF------------------------GEQLDKCETVACMAGSNDLMLGPLPDRSGEAFREEPDSAESR----------------------QLFWNLAKESKSQTEDFVDSGGPTHAVRVFDFAMSISDMNNLVDLTAKSNDSLGRAYSAGVSNNGVYE 542
BLAST of NO09G02500 vs. NCBI_GenBank
Match: OEU18046.1 (hypothetical protein FRACYDRAFT_183807 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 97.4 bits (241), Expect = 1.900e-16 Identity = 160/675 (23.70%), Postives = 250/675 (37.04%), Query Frame = 0 Query: 62 ETVIKSASSQPSQAPQTPPKRQPWRRLGSFETLLARKAAAGPQRLSIP---HVCVAVVDDEQGLLNARLLKPALVSLVRRHPKLRACIQGTGKVEGA--PVAGVRRGGREVDPLMWWPCAMTPEEVVEEALSFDDGSSSSSINDDAQDSPFFFSVSFQAALDN----TDMDSSRGPLWRLHVMR-SQGSRKGTKPAGPGGVGQVALLFIFNHAISDQVSCNTLIHELLSTLGE---------XXXXXXXXXXXXXXXXXQPFPPSIEKAILG-------PARATVSFTTALYAARECLFG-----LLPTTLYPTXXXXXXXXXXXXXXXTI-------PPPLPAANRRTICVFRREEPSRLSLLKEECKKRGVTVTAALSAAMLYATSDLAHGEEEEGRAEGVRNGKEHNYRFLLSLNMRTFSRRKLGGGTEGGEGEKEKXXXXXXGEEDWEENAVASAAGAMDFMVRLQERQGRNLLCTHKSTTSKNGTVAATAATAPGAPRPHVAGEEAFWLLAKQCRREFLDFVSAGFVPESVNLFDWGMQTLELNEVVEKEAENPKTLGRAYTCGVSNMGVFEDGMGGGRRRGSNRSSNGSRGMDEDFSLSSSAFSSCLPSYGSLRLHGIHYATSHSLTGSLYQLSCGTVNGALCLTFHYPWPLVDREMANRFADRVVQIL 699 +T + ++S++ + + + R LGS E L + P H+ VA++ Q + + L A+ ++ HP LR + G G+ + VR+G PC T + A SS+ + + S + SFQ LDN D+ S PLW+L + R + GS + ALLF FNHAISDQ S L ++L+ + + XXXXXXXXXXXX Q PPS+E+++LG + ++ T Y A + L +LP T TI + NR+++ FR L ++C+ V++T ALSAA+ NY+ L SL+MR + GE + +V AG+MD M H GT T V +FD+ M +LN +V A++ +LGRAY+ G +N G++E R ++ +G ++ I+YA S++ +GSLY+ S TV + TFH P+V+ FAD ++++L Sbjct: 5 DTTLPTSSTKKQKDSEEQNPLRLKRELGSQENLXXXXXXXXXXDVVFPSMNHISVALISGSQ-IPSENALNYAINLCMQSHPLLRCYVDGNGEPDERIDLFQMVRKGDNN-------PCIFTATNMKYTAKDVLKMMPSSTSFQEFESS---WQSSFQNDLDNGASWCDVKDSTTPLWKLELHRFNTGSXXXXXXXXXXXDNKAALLFSFNHAISDQSSACRLTDQILALVVDXXXXXXXXXXXXXXXXXXXXXKIPKSQSIPPSVEESVLGLKKRFKDVGKEDITLNTIKYVAGKALEEIKGPVILPDDFKTTTSKEGGGSGFTGALTTISGNAAGGDADKDSLNRKSVLAFRTLSKDTTDALLKKCRANNVSITNALSAALXXXXXXXXXXXXXXXXXXXXXXXXXRNYKILQSLDMRRY------------------------GECLDQGKSVGCLAGSMDLM--------------HGPLNDNTGTAIRT---------------------------------------RQVRVFDFAMTISDLNNLVHLTAQSKDSLGRAYSGGFTNAGIYE--------RLTSFEXXXXXXXXXXXXXXXXXXXXXXXXHGKYTINDIYYAASNARSGSLYRFSVITVGNEMKFTFHPASPIVNDSTNEEFADALIELL 583 The following BLAST results are available for this feature:
BLAST of NO09G02500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02500 ID=NO09G02500|Name=NO09G02500|organism=Nannochloropsis oceanica|type=gene|length=2451bpback to top protein sequence of NO09G02500.1 >NO09G02500.1-protein ID=NO09G02500.1-protein|Name=NO09G02500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=722bpback to top Synonyms
Publications
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