NO09G02430, NO09G02430 (gene) Nannochloropsis oceanica

Overview
NameNO09G02430
Unique NameNO09G02430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1617
Alignment locationchr9:726868..728484 +

Link to JBrowse

Properties
Property NameValue
DescriptionInhibitor of growth protein 4
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:726868..728484 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0070776MOZ/MORF histone acetyltransferase complex
GO:0005634nucleus
GO:0005654nucleoplasm
Vocabulary: Biological Process
TermDefinition
GO:0016573histone acetylation
GO:0008285negative regulation of cell proliferation
GO:0016043cellular component organization
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019787Znf_PHD-finger
IPR028638ING5
IPR001965Znf_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
BLAST of NO09G02430 vs. NCBI_GenBank
Match: EWM27556.1 (inhibitor of growth protein 4 [Nannochloropsis gaditana])

HSP 1 Score: 331.3 bits (848), Expect = 3.700e-87
Identity = 179/267 (67.04%), Postives = 213/267 (79.78%), Query Frame = 0
Query:   18 IYPASFIKRNLVPGADSYRQTLAELRDMDKDSIIQRAKYWRMEDQLVEKATRLLTSKETSPEDIQTLLAS-DFTMLSTAQQQINDVRTRTLRLATAAYDKVDDSIQALDWDIGMLEPQMAASAAED-NSLDPQILAIKRKEQXXXXXXXXXXXXXXXXXXXXXXGKGGKDMSGDLGLVPAVGQGQGAHGAEEEVDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDCCVEKGVIYQGTAVALPPPQTSK 283
            IYPASF+ R+LVPGA++YRQ L+ LR +DK+   +R +YWR ED LVE A++LLTSK+++PED+Q  L+S DF  LS  QQ INDVRT+ LRLAT AYDK+DDSI+ALDWDIGMLEPQMAA+AAED ++LDPQILAIKRKEQ XXXXXXXXXX           GK G  +  DLGLV +VG GQG    +++VDPNEPVYCTCQRVSYGQMVGCDNE+C FEWFHLDCVGLV PPTG+WLCPDCC EK + YQG AVA P  ++++
Sbjct:   22 IYPASFVSRHLVPGAETYRQRLSVLRSIDKEVAKKRDEYWRKEDALVEMASKLLTSKDSNPEDLQAFLSSADFADLSAHQQDINDVRTQALRLATEAYDKIDDSIRALDWDIGMLEPQMAAAAAEDYSTLDPQILAIKRKEQRXXXXXXXXXXRELAVQKKKRLGKRG--LPEDLGLVASVGPGQGTTEGDDDVDPNEPVYCTCQRVSYGQMVGCDNEDCRFEWFHLDCVGLVAPPTGNWLCPDCCNEKELAYQG-AVAAPSAESAQ 285          
BLAST of NO09G02430 vs. NCBI_GenBank
Match: CCA20127.1 (AhpC/TSA family Redoxin putative [Albugo laibachii Nc14])

HSP 1 Score: 105.1 bits (261), Expect = 4.300e-19
Identity = 81/259 (31.27%), Postives = 122/259 (47.10%), Query Frame = 0
Query:   22 SFIKRN--LVPGAD--SYRQTLAELRDMDKDSIIQRAKYWRMEDQLVEKATRLLTSKETSPEDIQTLLASDFTMLSTAQQQINDVRTRTLRLATAA--YDKVDDSIQALDWDIGMLEPQMAASAAEDNSLDPQ--ILAIKRKE---------QXXXXXXXXXXXXXXXXXXXXXXGKGGKDMSGDLGLVPAVGQGQGAHGA---EEEVDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDC 261
            S +KRN  LV   D  SY Q + +L+D  +  +I   K         EK       +E + E+++ L+ +D T+    +++ N ++    ++A AA  Y+ VD  I+ LD D+      +  +   ++ +D +  I A KR++         Q                        G K  +G+  L   V     A  A   +  +DPNEPVYC C+RVS+GQMVGCDN++C FEWFH +CVGL   P G W C DC
Sbjct:  405 SDVKRNFDLVRELDKTSY-QLVEDLKDSHRKYLIDARKKVMARWADAEK-------EEPTEEELRLLVETDETLKLLKEREQNVIQKLDEKVAIAAQSYELVDHHIRRLDQDLEAFGALLKQNGEFEDDMDDEKRISARKRRQDKSIQQEKLQLQLQQLKQQVNSSTRKKSVASNNVGRKRGAGEANLDADVTNWDDASEAIQDDSAIDPNEPVYCHCRRVSFGQMVGCDNDDCRFEWFHFECVGLTEQPAGMWYCHDC 655          
BLAST of NO09G02430 vs. NCBI_GenBank
Match: OWZ21633.1 (AhpC/TSA family Redoxin [Phytophthora megakarya])

HSP 1 Score: 103.6 bits (257), Expect = 1.200e-18
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 0
Query:  209 VDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDCCVEKGV 267
            +DPNEP+YC+C+RVS+GQMVGCDN++C +EWFH  CVGL   P G W CPDC  + G+
Sbjct:  229 IDPNEPIYCSCRRVSFGQMVGCDNDDCKYEWFHFGCVGLTDQPAGQWYCPDCKTQLGI 286          
BLAST of NO09G02430 vs. NCBI_GenBank
Match: KXS16079.1 (hypothetical protein M427DRAFT_31651 [Gonapodya prolifera JEL478])

HSP 1 Score: 103.2 bits (256), Expect = 1.600e-18
Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 0
Query:  195 AVGQGQGAHGAEEEVDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDCCVEKG 266
            A  Q   A  + +++DPNEPVYC CQ+VSYG+MVGCD+ EC  EWFH+ CVGL  PP G W CP C   +G
Sbjct:  210 ATPQDIAAFLSSDDIDPNEPVYCICQQVSYGEMVGCDDAECEIEWFHMGCVGLAAPPRGKWYCPACSSRRG 280          
BLAST of NO09G02430 vs. NCBI_GenBank
Match: SAM06044.1 (hypothetical protein [Absidia glauca])

HSP 1 Score: 102.8 bits (255), Expect = 2.100e-18
Identity = 73/235 (31.06%), Postives = 104/235 (44.26%), Query Frame = 0
Query:   35 YRQTLAEL-RDMDKDSIIQRAKYWRMED---QLVEKATRLLTSKETSPEDIQTLLASDFTMLSTAQQQINDVRTRTLRLATAAYDKVDDSIQALDWDIGMLEPQMAASAAEDNSLDPQILAIKRKEQXXXXXXXXXXXXXXXXXXXXXXGKGGKDMSGD-LGLVPAVGQGQGA-HGAEEEVDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDCCVE 264
            YR TL  L  ++ ++  + R    R ED   ++ +++T    S+   P+  +     D T   T+  +          LA + YD VD   Q LD D+   E +     +    L PQ L     +                        +   D  GD L    A+   Q A + ++  +DPNEPVYC C+ VSYG MV CDN+EC  EWFHL+CVGL  PP G W C +C V+
Sbjct:   15 YRDTLDVLPMELQRNFTLIRQLDERAEDLMGKVAKQSTSFCNSEVPIPDQERRQRLKDIT---TSLNEAIKRGEEKFALAKSTYDAVDRHCQRLDHDLNKFEDEQLIGPSRIGRLQPQELI---AQPAPIKPIPAPKAIKGRKGSRKRKLEPEDDQQGDYLSTEDALQHAQAAINLSDMPIDPNEPVYCYCRMVSYGDMVACDNDECDIEWFHLECVGLQTPPKGKWYCKNCAVD 243          
BLAST of NO09G02430 vs. NCBI_GenBank
Match: ORZ25672.1 (hypothetical protein BCR42DRAFT_364059 [Absidia repens])

HSP 1 Score: 102.4 bits (254), Expect = 2.800e-18
Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 0
Query:  205 AEEEVDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDCCVEKG 266
            +E  +DPNEPVYCTC+ VSYG+MV CDN+EC  EWFHL+CVGL  PP G W C +C   KG
Sbjct:  198 SELPIDPNEPVYCTCRMVSYGEMVACDNDECEIEWFHLECVGLKTPPKGKWYCDNCVGMKG 258          
BLAST of NO09G02430 vs. NCBI_GenBank
Match: OWZ24285.1 (AhpC/TSA family Redoxin [Phytophthora megakarya])

HSP 1 Score: 102.4 bits (254), Expect = 2.800e-18
Identity = 69/257 (26.85%), Postives = 111/257 (43.19%), Query Frame = 0
Query:   42 LRDMDKDSIIQRAKYWRMEDQLVEKATRLL-------TSKETSPEDIQTLLASDFTMLSTAQQQINDVRTRTLRLATAA--YDKVDDSIQALDWDIGMLEPQMAAS---------------------AAEDNSLDPQILAIKRKEQXXXXXXXXXXXXXXXXXXXXXXGKGGKDMSGDLGLVPAVGQGQGAHGAEEE--VDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDCCVEKGV 267
            +RD+DK S     ++   +   +  A + +       T  E + ++++ L+ +D  +L+  +Q    V+    ++A AA  YD VD  I+ LD D+      + AS                       +   + P +  ++ K                            K    +  +V  V        A E+  +DPNEP+YC+C+RVS+GQMVGCDN++C +EWFH  CVGL   P G W C DC V+ G+
Sbjct:   26 MRDLDKTSYPLLEEFKTTQKSYLTSARQKVLARCADSTKDEATEKELRELIKADQMVLTLQEQHALVVQKLDEKIAIAAQSYDIVDHHIRRLDRDLENYSALLKASGEYQEDSRPQRKKQKVATGFTGLQSQHITPHVAHVRNKLNSVATNGLNKATTPVVSKASTAGSSSRKKSIAETAVVTPVAVPDPVILAAEDLPIDPNEPIYCSCRRVSFGQMVGCDNDDCKYEWFHFGCVGLTDQPAGQWYCQDCKVQLGM 282          
BLAST of NO09G02430 vs. NCBI_GenBank
Match: GAA49965.1 (inhibitor of growth protein 4 [Clonorchis sinensis])

HSP 1 Score: 102.1 bits (253), Expect = 3.600e-18
Identity = 40/64 (62.50%), Postives = 44/64 (68.75%), Query Frame = 0
Query:  209 VDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDCCVEKGVIYQGTA 273
            VDPNEP YC CQ+VSYG+MV CDN +C  EWFH DCVGLV  P G W CP C  E+   Y  TA
Sbjct:  213 VDPNEPTYCVCQQVSYGEMVACDNHDCPIEWFHFDCVGLVNKPRGKWYCPQCTAEECSAYSLTA 276          
BLAST of NO09G02430 vs. NCBI_GenBank
Match: ETI37436.1 (hypothetical protein F443_16573 [Phytophthora parasitica P1569] >ETK77658.1 hypothetical protein L915_16107 [Phytophthora parasitica] >ETL31103.1 hypothetical protein L916_16000 [Phytophthora parasitica] >ETP07297.1 hypothetical protein F441_16402 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 102.1 bits (253), Expect = 3.600e-18
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 0
Query:  209 VDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDCCVEKGV 267
            +DPNEP+YC+C+RVS+GQMVGCDN++C +EWFH  CVGL   P G W C DC V+ G+
Sbjct:  223 IDPNEPIYCSCRRVSFGQMVGCDNDDCKYEWFHFGCVGLADQPAGKWYCQDCKVQLGI 280          
BLAST of NO09G02430 vs. NCBI_GenBank
Match: XP_008911782.1 (hypothetical protein PPTG_15786 [Phytophthora parasitica INRA-310] >ETL84357.1 hypothetical protein L917_15798 [Phytophthora parasitica] >ETM37529.1 hypothetical protein L914_15928 [Phytophthora parasitica] >ETN02825.1 hypothetical protein PPTG_15786 [Phytophthora parasitica INRA-310])

HSP 1 Score: 102.1 bits (253), Expect = 3.600e-18
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 0
Query:  209 VDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDCCVEKGV 267
            +DPNEP+YC+C+RVS+GQMVGCDN++C +EWFH  CVGL   P G W C DC V+ G+
Sbjct:  223 IDPNEPIYCSCRRVSFGQMVGCDNDDCKYEWFHFGCVGLADQPAGKWYCQDCKVQLGI 280          
The following BLAST results are available for this feature:
BLAST of NO09G02430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27556.13.700e-8767.04inhibitor of growth protein 4 [Nannochloropsis gad... [more]
CCA20127.14.300e-1931.27AhpC/TSA family Redoxin putative [Albugo laibachii... [more]
OWZ21633.11.200e-1862.07AhpC/TSA family Redoxin [Phytophthora megakarya][more]
KXS16079.11.600e-1856.34hypothetical protein M427DRAFT_31651 [Gonapodya pr... [more]
SAM06044.12.100e-1831.06hypothetical protein [Absidia glauca][more]
ORZ25672.12.800e-1863.93hypothetical protein BCR42DRAFT_364059 [Absidia re... [more]
OWZ24285.12.800e-1826.85AhpC/TSA family Redoxin [Phytophthora megakarya][more]
GAA49965.13.600e-1862.50inhibitor of growth protein 4 [Clonorchis sinensis... [more]
ETI37436.13.600e-1862.07hypothetical protein F443_16573 [Phytophthora para... [more]
XP_008911782.13.600e-1862.07hypothetical protein PPTG_15786 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL122nonsL122Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR129ngnoR129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010784NSK010784Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02430.1NO09G02430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|20672gene_4305Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100015g8gene3024Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02430.1NO09G02430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02430 ID=NO09G02430|Name=NO09G02430|organism=Nannochloropsis oceanica|type=gene|length=1617bp
ATGGCGGCGTCATCATCCAAAGGCGGCGGAGGCTCGTCCAATTCTTCGTC
CATTTATCCTGCCTCCTTCATCAAGCGAAACCTTGTCCCGGGCGCTGACA
GCTACAGACAGACGCTCGCAGAGTTGCGGGACATGGATAAGgtgagtcac
attggagtgattcgtgggttgacgagaaagtgggcccgttctttgagcag
aaaaaggggagaacatcggcggacgggaaagagggtcgggtcaaggcatg
atgggccaaaccgcagagagaagactccatgaaggcccgacagcttttga
atgctgtcacaaaattaagcagcgaggagtgctcgcctacactgtcccgc
acgaatctctctactcttgcgaattggtgtgccggccagacaggccccta
ctctcatcgcgtcgcgaccactcccctatttcccacaccaaatcaccgac
atccgccattctctctcccccgcctctccccccgtgtaaatcagGATTCG
ATTATACAACGAGCAAAGTATTGGAGGATGGAAGACCAACTGGTTGAAAA
AGCGACTAGGCTCTTGACGAGCAAGgtaaaaaagggtgtggagaacggga
gaggcagaagaagaagggcaagcgaccatgtaaaacgatcacgtcatact
tttgtgtctaagtcctagagtcctttcccttcttgttccttttatataca
gGAAACCAGCCCTGAGGACATACAAACCTTGCTCGCCTCCGACTTTACCA
TGCTCAGCACCGCCCAACAACAAATCAACGACGTCCGCACCCGAACGCTG
CGTCTTGCCACGGCTGCCTATGATAAAGTGGACGATAGCATTCAGGCCTT
AGACTGGGACATTGGTATGCTGGAACCACAGATGGCAGCATCGGCTGCAG
AGGACAATAGTTTAGACCCTCAGATCCTGGCGATAAAGAGGAAGGAGCAA
CGGAAGgtggggaatggagggagaaaaggatggcggaagggtggatttga
atatcttctctgcctctgcagcacgttactcagccctccctctgtcaccc
ttctgtaacacccagGCACAGCGGCAAGAAAAGCAACGCGCGAAGGAAAT
GGCCTCCAAAAAGAAGAAAAAATTGGGGAAAGGTGGGAAAGACATGTCCG
GCGACCTGGGGCTAGTTCCTGCTGTCGGACAAGGACAAGGCGCTCATGGC
GCAGAAGAGGAAGTGGACCCGAATGAGCCGGTGTACTGTACATGCCAACG
TGTCTCGTATGGCCAAATGGTGGGGTGTGATAATGAGGAGTGTTCTTTCG
AATGGTTTCACTTGGATTGTGTGGGCTTGGTCGTGCCTCCGACGGGGAGT
TGGTTGTGCCCGGACTGCTGTGTGGAAAAAGGCGTCATCTACCAAGGAAC
GGCAGTGGCGCTACCACCACCGCAGACGTCCAAGCCTCCGGTTAATGCTG
TTTCTCCTATGGAGGTGGAGCAGCAGGAGGAGCAGGGGAAGGAGCAGGCG
CTGGAGCGAAGTGCGAAGGAGGCTGCCGCCAGGGTGGTTGAAGAACAAGA
AGGAGTGAAGGAAGGAGGAGAAAAGTTGATGGAAGGGAAGGAGGCTGCAC
CACTAGACTCAGTATAG
back to top

protein sequence of NO09G02430.1

>NO09G02430.1-protein ID=NO09G02430.1-protein|Name=NO09G02430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp
MAASSSKGGGGSSNSSSIYPASFIKRNLVPGADSYRQTLAELRDMDKDSI
IQRAKYWRMEDQLVEKATRLLTSKETSPEDIQTLLASDFTMLSTAQQQIN
DVRTRTLRLATAAYDKVDDSIQALDWDIGMLEPQMAASAAEDNSLDPQIL
AIKRKEQRKAQRQEKQRAKEMASKKKKKLGKGGKDMSGDLGLVPAVGQGQ
GAHGAEEEVDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVP
PTGSWLCPDCCVEKGVIYQGTAVALPPPQTSKPPVNAVSPMEVEQQEEQG
KEQALERSAKEAAARVVEEQEGVKEGGEKLMEGKEAAPLDSV*
back to top
Synonyms
Publications