NO09G02430.1, NO09G02430.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G02430.1
Unique NameNO09G02430.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1029
Alignment locationchr9:726868..728484 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:726868..728484 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO09G02430.1 vs.
Match: EWM27556.1 (inhibitor of growth protein 4 [Nannochloropsis gaditana])

HSP 1 Score: 355.5 bits (911), Expect = 1.800e-94
Identity = 200/335 (59.70%), Postives = 253/335 (75.52%), Query Frame = 0 
Query:    1 MAASSSKGGGGSSNS----SSIYPASFIKRNLVPGADSYRQTLAELRDMDKDSIIQRAKYWRMEDQLVEKATRLLTSKETSPEDIQTLLAS-DFTMLSTAQQQINDVRTRTLRLATAAYDKVDDSIQALDWDIGMLEPQMAASAAEDNS-LDPQILAIKRKEQRKAQRQEKQRAKEMASKKKKKLGKGGKDMSGDLGLVPAVGQGQGAHGAEEEVDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVPPTGSWLCPDCCVEKGVIYQGTAVALPPPQTSKPPVN-AVSPMEVEQQEEQGKEQALERSAKEAAARVVEEQEGVKEGGE 329
            M++S S G   +  S    S+IYPASF+ R+LVPGA++YRQ L+ LR +DK+   +R +YWR ED LVE A++LLTSK+++PED+Q  L+S DF  LS  QQ INDVRT+ LRLAT AYDK+DDSI+ALDWDIGMLEPQMAA+AAED S LDPQILAIKRKEQRKAQRQ K+RA+E+A +KKK+LGK G  +  DLGLV +VG GQG    +++VDPNEPVYCTCQRVSYGQMVGCDNE+C FEWFHLDCVGLV PPTG+WLCPDCC EK + YQG AVA P  ++++   +    P   + Q+ + +E  ++ + +  A    E+ + + EGGE
Sbjct:    1 MSSSCSDGVADARLSAAGISAIYPASFVSRHLVPGAETYRQRLSVLRSIDKEVAKKRDEYWRKEDALVEMASKLLTSKDSNPEDLQAFLSSADFADLSAHQQDINDVRTQALRLATEAYDKIDDSIRALDWDIGMLEPQMAAAAAEDYSTLDPQILAIKRKEQRKAQRQGKRRARELAVQKKKRLGKRG--LPEDLGLVASVGPGQGTTEGDDDVDPNEPVYCTCQRVSYGQMVGCDNEDCRFEWFHLDCVGLVAPPTGNWLCPDCCNEKELAYQG-AVAAPSAESAQEQADEEKKPSRADAQKSENRENEIKGANEGMAVHEGEDGKLIGEGGE 332
The following BLAST results are available for this feature:
BLAST of NO09G02430.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27556.11.800e-9459.70inhibitor of growth protein 4 [Nannochloropsis gad... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02430NO09G02430Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G02430.1NO09G02430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G02430.1.cds1NO09G02430.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G02430.1.cds2NO09G02430.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G02430.1.cds3NO09G02430.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G02430.1.cds4NO09G02430.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G02430.1 ID=NO09G02430.1|Name=NO09G02430.1|organism=Nannochloropsis oceanica|type=mRNA|length=1029bp
ATGGCGGCGTCATCATCCAAAGGCGGCGGAGGCTCGTCCAATTCTTCGTC
CATTTATCCTGCCTCCTTCATCAAGCGAAACCTTGTCCCGGGCGCTGACA
GCTACAGACAGACGCTCGCAGAGTTGCGGGACATGGATAAGGATTCGATT
ATACAACGAGCAAAGTATTGGAGGATGGAAGACCAACTGGTTGAAAAAGC
GACTAGGCTCTTGACGAGCAAGGAAACCAGCCCTGAGGACATACAAACCT
TGCTCGCCTCCGACTTTACCATGCTCAGCACCGCCCAACAACAAATCAAC
GACGTCCGCACCCGAACGCTGCGTCTTGCCACGGCTGCCTATGATAAAGT
GGACGATAGCATTCAGGCCTTAGACTGGGACATTGGTATGCTGGAACCAC
AGATGGCAGCATCGGCTGCAGAGGACAATAGTTTAGACCCTCAGATCCTG
GCGATAAAGAGGAAGGAGCAACGGAAGGCACAGCGGCAAGAAAAGCAACG
CGCGAAGGAAATGGCCTCCAAAAAGAAGAAAAAATTGGGGAAAGGTGGGA
AAGACATGTCCGGCGACCTGGGGCTAGTTCCTGCTGTCGGACAAGGACAA
GGCGCTCATGGCGCAGAAGAGGAAGTGGACCCGAATGAGCCGGTGTACTG
TACATGCCAACGTGTCTCGTATGGCCAAATGGTGGGGTGTGATAATGAGG
AGTGTTCTTTCGAATGGTTTCACTTGGATTGTGTGGGCTTGGTCGTGCCT
CCGACGGGGAGTTGGTTGTGCCCGGACTGCTGTGTGGAAAAAGGCGTCAT
CTACCAAGGAACGGCAGTGGCGCTACCACCACCGCAGACGTCCAAGCCTC
CGGTTAATGCTGTTTCTCCTATGGAGGTGGAGCAGCAGGAGGAGCAGGGG
AAGGAGCAGGCGCTGGAGCGAAGTGCGAAGGAGGCTGCCGCCAGGGTGGT
TGAAGAACAAGAAGGAGTGAAGGAAGGAGGAGAAAAGTTGATGGAAGGGA
AGGAGGCTGCACCACTAGACTCAGTATAG
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protein sequence of NO09G02430.1

>NO09G02430.1-protein ID=NO09G02430.1-protein|Name=NO09G02430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp
MAASSSKGGGGSSNSSSIYPASFIKRNLVPGADSYRQTLAELRDMDKDSI
IQRAKYWRMEDQLVEKATRLLTSKETSPEDIQTLLASDFTMLSTAQQQIN
DVRTRTLRLATAAYDKVDDSIQALDWDIGMLEPQMAASAAEDNSLDPQIL
AIKRKEQRKAQRQEKQRAKEMASKKKKKLGKGGKDMSGDLGLVPAVGQGQ
GAHGAEEEVDPNEPVYCTCQRVSYGQMVGCDNEECSFEWFHLDCVGLVVP
PTGSWLCPDCCVEKGVIYQGTAVALPPPQTSKPPVNAVSPMEVEQQEEQG
KEQALERSAKEAAARVVEEQEGVKEGGEKLMEGKEAAPLDSV*
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mRNA from alignment at chr9:726868..728484+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G02430.1 ID=NO09G02430.1|Name=NO09G02430.1|organism=Nannochloropsis oceanica|type=mRNA|length=1617bp|location=Sequence derived from alignment at chr9:726868..728484+ (Nannochloropsis oceanica)
ATGGCGGCGTCATCATCCAAAGGCGGCGGAGGCTCGTCCAATTCTTCGTC
CATTTATCCTGCCTCCTTCATCAAGCGAAACCTTGTCCCGGGCGCTGACA
GCTACAGACAGACGCTCGCAGAGTTGCGGGACATGGATAAGGTGAGTCAC
ATTGGAGTGATTCGTGGGTTGACGAGAAAGTGGGCCCGTTCTTTGAGCAG
AAAAAGGGGAGAACATCGGCGGACGGGAAAGAGGGTCGGGTCAAGGCATG
ATGGGCCAAACCGCAGAGAGAAGACTCCATGAAGGCCCGACAGCTTTTGA
ATGCTGTCACAAAATTAAGCAGCGAGGAGTGCTCGCCTACACTGTCCCGC
ACGAATCTCTCTACTCTTGCGAATTGGTGTGCCGGCCAGACAGGCCCCTA
CTCTCATCGCGTCGCGACCACTCCCCTATTTCCCACACCAAATCACCGAC
ATCCGCCATTCTCTCTCCCCCGCCTCTCCCCCCGTGTAAATCAGGATTCG
ATTATACAACGAGCAAAGTATTGGAGGATGGAAGACCAACTGGTTGAAAA
AGCGACTAGGCTCTTGACGAGCAAGGTAAAAAAGGGTGTGGAGAACGGGA
GAGGCAGAAGAAGAAGGGCAAGCGACCATGTAAAACGATCACGTCATACT
TTTGTGTCTAAGTCCTAGAGTCCTTTCCCTTCTTGTTCCTTTTATATACA
GGAAACCAGCCCTGAGGACATACAAACCTTGCTCGCCTCCGACTTTACCA
TGCTCAGCACCGCCCAACAACAAATCAACGACGTCCGCACCCGAACGCTG
CGTCTTGCCACGGCTGCCTATGATAAAGTGGACGATAGCATTCAGGCCTT
AGACTGGGACATTGGTATGCTGGAACCACAGATGGCAGCATCGGCTGCAG
AGGACAATAGTTTAGACCCTCAGATCCTGGCGATAAAGAGGAAGGAGCAA
CGGAAGGTGGGGAATGGAGGGAGAAAAGGATGGCGGAAGGGTGGATTTGA
ATATCTTCTCTGCCTCTGCAGCACGTTACTCAGCCCTCCCTCTGTCACCC
TTCTGTAACACCCAGGCACAGCGGCAAGAAAAGCAACGCGCGAAGGAAAT
GGCCTCCAAAAAGAAGAAAAAATTGGGGAAAGGTGGGAAAGACATGTCCG
GCGACCTGGGGCTAGTTCCTGCTGTCGGACAAGGACAAGGCGCTCATGGC
GCAGAAGAGGAAGTGGACCCGAATGAGCCGGTGTACTGTACATGCCAACG
TGTCTCGTATGGCCAAATGGTGGGGTGTGATAATGAGGAGTGTTCTTTCG
AATGGTTTCACTTGGATTGTGTGGGCTTGGTCGTGCCTCCGACGGGGAGT
TGGTTGTGCCCGGACTGCTGTGTGGAAAAAGGCGTCATCTACCAAGGAAC
GGCAGTGGCGCTACCACCACCGCAGACGTCCAAGCCTCCGGTTAATGCTG
TTTCTCCTATGGAGGTGGAGCAGCAGGAGGAGCAGGGGAAGGAGCAGGCG
CTGGAGCGAAGTGCGAAGGAGGCTGCCGCCAGGGTGGTTGAAGAACAAGA
AGGAGTGAAGGAAGGAGGAGAAAAGTTGATGGAAGGGAAGGAGGCTGCAC
CACTAGACTCAGTATAG
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Coding sequence (CDS) from alignment at chr9:726868..728484+

>NO09G02430.1 ID=NO09G02430.1|Name=NO09G02430.1|organism=Nannochloropsis oceanica|type=CDS|length=1029bp|location=Sequence derived from alignment at chr9:726868..728484+ (Nannochloropsis oceanica)
ATGGCGGCGTCATCATCCAAAGGCGGCGGAGGCTCGTCCAATTCTTCGTC
CATTTATCCTGCCTCCTTCATCAAGCGAAACCTTGTCCCGGGCGCTGACA
GCTACAGACAGACGCTCGCAGAGTTGCGGGACATGGATAAGGATTCGATT
ATACAACGAGCAAAGTATTGGAGGATGGAAGACCAACTGGTTGAAAAAGC
GACTAGGCTCTTGACGAGCAAGGAAACCAGCCCTGAGGACATACAAACCT
TGCTCGCCTCCGACTTTACCATGCTCAGCACCGCCCAACAACAAATCAAC
GACGTCCGCACCCGAACGCTGCGTCTTGCCACGGCTGCCTATGATAAAGT
GGACGATAGCATTCAGGCCTTAGACTGGGACATTGGTATGCTGGAACCAC
AGATGGCAGCATCGGCTGCAGAGGACAATAGTTTAGACCCTCAGATCCTG
GCGATAAAGAGGAAGGAGCAACGGAAGGCACAGCGGCAAGAAAAGCAACG
CGCGAAGGAAATGGCCTCCAAAAAGAAGAAAAAATTGGGGAAAGGTGGGA
AAGACATGTCCGGCGACCTGGGGCTAGTTCCTGCTGTCGGACAAGGACAA
GGCGCTCATGGCGCAGAAGAGGAAGTGGACCCGAATGAGCCGGTGTACTG
TACATGCCAACGTGTCTCGTATGGCCAAATGGTGGGGTGTGATAATGAGG
AGTGTTCTTTCGAATGGTTTCACTTGGATTGTGTGGGCTTGGTCGTGCCT
CCGACGGGGAGTTGGTTGTGCCCGGACTGCTGTGTGGAAAAAGGCGTCAT
CTACCAAGGAACGGCAGTGGCGCTACCACCACCGCAGACGTCCAAGCCTC
CGGTTAATGCTGTTTCTCCTATGGAGGTGGAGCAGCAGGAGGAGCAGGGG
AAGGAGCAGGCGCTGGAGCGAAGTGCGAAGGAGGCTGCCGCCAGGGTGGT
TGAAGAACAAGAAGGAGTGAAGGAAGGAGGAGAAAAGTTGATGGAAGGGA
AGGAGGCTGCACCACTAGACTCAGTATAG
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Synonyms
Publications