NO09G02240, NO09G02240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02240 vs. NCBI_GenBank
Match: OAE35522.1 (hypothetical protein AXG93_2782s1060 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 255.0 bits (650), Expect = 1.900e-64 Identity = 139/191 (72.77%), Postives = 154/191 (80.63%), Query Frame = 0 Query: 2 GIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGP-HDREALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 GIDLK+GGR TRTAPKSDNVYLKLLVKLYRFL RRTD+SFNAVVLKRLFMSKT+R PI++SRL R+MKGKE K AVIVGT+TDD R+ EVP L VAAL+ T TARARIL+ GGEI TFDELAL+AP GT CVLLRGP + REA+ HFG V + HT KPY R KGRKFEKARGRR S GFK+ Sbjct: 31 GIDLKAGGRNK-KTTRTAPKSDNVYLKLLVKLYRFLVRRTDASFNAVVLKRLFMSKTHRAPISMSRLSRYMKGKEDKIAVIVGTVTDDVRLYEVPALKVAALRFTETARARILKNGGEIYTFDELALKAPTGTGCVLLRGPKNSREAVKHFGRAPGVPHSHT----KPYVRHKGRKFEKARGRRNSRGFKV 216
BLAST of NO09G02240 vs. NCBI_GenBank
Match: OEU13371.1 (RL18, ribosomal protein 18 60S large ribosomal subunit [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 254.2 bits (648), Expect = 3.200e-64 Identity = 131/192 (68.23%), Postives = 150/192 (78.12%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHK-TRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHDREALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDLK+GGRRTGHK + K+ N Y +LL+KLY+FL+RRTDS F A VLKRL MSK N+PPI ++RL R+M KE K AVIV +TDD RMLE PK++V AL T TAR RI+ AGGE LTFD+LALRAPKG VLLRGP REAL+HFGHR TV N HTHD VKPY R+ GRKFEKARGRRRS GFK+ Sbjct: 1 MGIDLKAGGRRTGHKSSMKIVKTKNPYNRLLIKLYKFLSRRTDSKFCATVLKRLHMSKVNQPPIGLNRLSRYMTNKESKIAVIVAKVTDDVRMLECPKMTVCALAFTETARKRIVGAGGECLTFDQLALRAPKGNGTVLLRGPKSREALAHFGHRVTVNNPHTHDGVKPYVRSTGRKFEKARGRRRSKGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: OWZ21539.1 (60S ribosomal protein L18-2 [Phytophthora megakarya]) HSP 1 Score: 254.2 bits (648), Expect = 3.200e-64 Identity = 127/192 (66.15%), Postives = 155/192 (80.73%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDL +GG+ G K RT PKSDNVYL LLV+LYRFLARRTD+ FN +VL+RL+ S TN+ P+++ ++ R MK EGK AV+VGT+TDD R+L VPKLSV AL T TARARI+Q GGE L+FD+LALRAPKGTN VLLRG R +HFGH+ST+ +VHTHD+VKPY R+KGRKFE+ARGRR+S GFK+ Sbjct: 1 MGIDLVAGGKVVGKKNRTNPKSDNVYLNLLVRLYRFLARRTDAKFNDIVLRRLYQSNTNQAPLSLGKVARFMKKHEGKIAVVVGTVTDDIRLLNVPKLSVVALNFTETARARIVQNGGECLSFDQLALRAPKGTNTVLLRGARKARGVYAHFGHKSTLESVHTHDHVKPYVRSKGRKFERARGRRKSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: XP_009519518.1 (hypothetical protein PHYSODRAFT_284882 [Phytophthora sojae] >EGZ24230.1 hypothetical protein PHYSODRAFT_284882 [Phytophthora sojae]) HSP 1 Score: 253.4 bits (646), Expect = 5.400e-64 Identity = 126/192 (65.62%), Postives = 156/192 (81.25%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDL +GG+ G K RT PKSDNVYL LLV+LYRFLARRTD+ FN +VL+RL+ S TN+ P+++ ++ R MK EGK AV+VGT+TDD R+L VPKLSV AL T TARARI++AGGE L+FD+LALRAPKG+N VLLRG R +HFGH+ST+ +VHTHD+VKPY R+KGRKFE+ARGRR+S GFK+ Sbjct: 1 MGIDLVAGGKVVGKKNRTNPKSDNVYLNLLVRLYRFLARRTDAKFNDIVLRRLYQSNTNQAPLSLGKVARFMKKHEGKIAVVVGTVTDDIRLLNVPKLSVVALNFTETARARIVKAGGECLSFDQLALRAPKGSNTVLLRGARKARGVYAHFGHKSTLESVHTHDHVKPYVRSKGRKFERARGRRKSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: XP_002901873.1 (60S ribosomal protein L18-2 [Phytophthora infestans T30-4] >EEY57263.1 60S ribosomal protein L18-2 [Phytophthora infestans T30-4]) HSP 1 Score: 252.7 bits (644), Expect = 9.300e-64 Identity = 125/192 (65.10%), Postives = 156/192 (81.25%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDL +GG+ G K RT PKSDNVYLKLLV+LYRFLARRTD+ FN +VL+RL+ S TN+ P+++ ++ R MK EGK AV+V T+TDD R+L VPKL++ AL T TARARI++AGGE L+FD+LALRAPKGTN VLLRG R +HFGH+ST+ +VHTHD+VKPY R+KGRKFE+ARGRR+S GFK+ Sbjct: 1 MGIDLVAGGKVVGKKNRTNPKSDNVYLKLLVRLYRFLARRTDAKFNDIVLRRLYQSNTNQAPLSLGKVARFMKKHEGKIAVVVATVTDDIRLLTVPKLTIVALNFTETARARIVKAGGECLSFDQLALRAPKGTNTVLLRGARKARGVYAHFGHKSTLESVHTHDHVKPYVRSKGRKFERARGRRKSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: POM74050.1 (60S ribosomal protein L18-2 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 252.3 bits (643), Expect = 1.200e-63 Identity = 125/192 (65.10%), Postives = 156/192 (81.25%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDL +GG+ G K RT PKSDNVYL LLV+LYRFLARRTD+ FN +VL+RL+ S TN+ P+++ ++ R MK EGK AV+VGT+TDD R+L VPKLSV AL T TARARI++AGGE L+FD+LALR+PKG+N VLLRG R +HFGH+ST+ +VHTHD+VKPY R+KGRKFE+ARGRR+S GFK+ Sbjct: 1 MGIDLVAGGKVVGKKNRTNPKSDNVYLNLLVRLYRFLARRTDAKFNDIVLRRLYQSNTNQAPLSLGKVARFMKKHEGKIAVVVGTVTDDIRLLNVPKLSVVALNFTETARARIVKAGGECLSFDQLALRSPKGSNTVLLRGARKARGVYAHFGHKSTLESVHTHDHVKPYVRSKGRKFERARGRRKSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: XP_024384694.1 (60S ribosomal protein L18-like [Physcomitrella patens] >PNR61798.1 hypothetical protein PHYPA_000222 [Physcomitrella patens]) HSP 1 Score: 251.5 bits (641), Expect = 2.100e-63 Identity = 137/192 (71.35%), Postives = 156/192 (81.25%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDLK+GGR K RTAPKS NVYLKLLVKLYRFL RRTD+ FNAVVLKRLFMS+ NRPPI++SRLVR+MKGKE K AVIVG++TDD R+ EVP L VAAL+ T TARARIL+ GGE+LTFD+LALRAP G+NCVLLRGP + REA+ HFG G +H KPY R+KGRKFEKARGRR S GFK+ Sbjct: 1 MGIDLKAGGRNKKTK-RTAPKSGNVYLKLLVKLYRFLVRRTDAPFNAVVLKRLFMSRINRPPISMSRLVRYMKGKEDKIAVIVGSVTDDTRIYEVPALKVAALRFTETARARILKNGGEVLTFDQLALRAPTGSNCVLLRGPKNAREAVKHFG---APGVPRSH--AKPYVRSKGRKFEKARGRRNSRGFKV 186
BLAST of NO09G02240 vs. NCBI_GenBank
Match: GAX26081.1 (large subunit ribosomal protein L18e [Fistulifera solaris] >GAX24302.1 large subunit ribosomal protein L18e [Fistulifera solaris]) HSP 1 Score: 251.5 bits (641), Expect = 2.100e-63 Identity = 129/192 (67.19%), Postives = 151/192 (78.65%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAP-KSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHDREALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDLK+GGRR GHK+ K+ N Y +LL+KLY+FL+RRTDS F A VLKRL MSK N+PPI ++RL R M K+ KTAVIVG +TDD RML+ PKLSV AL T TAR RI+ AGGE +T D+LALRAPKG N VLLRGP R AL+HFGHR+TV N HTH+ VKPY R+KGRKFE+ARGRRRS GFK+ Sbjct: 1 MGIDLKAGGRRVGHKSSMKKVKTLNPYNRLLIKLYKFLSRRTDSKFCATVLKRLHMSKVNKPPIGLNRLARCMTNKDDKTAVIVGKVTDDVRMLDCPKLSVCALGFTETARKRIVAAGGECITLDQLALRAPKGKNTVLLRGPKSRAALAHFGHRTTVNNPHTHNGVKPYVRSKGRKFERARGRRRSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: XP_002184066.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44244.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 250.4 bits (638), Expect = 4.600e-63 Identity = 128/192 (66.67%), Postives = 149/192 (77.60%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGH-KTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHDREALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDLK+GGRR GH + A KS N Y KLL+KLY+FL RRTDS F VLKRL MSK N+PP+ + RL ++M KEGKTAVIVG +TDD RMLE PK+SV AL T AR RI+ +GGE +T D+LALRAPKG+N VLLRGP REAL+HFGH ++V N HTH VKPY R+KGRKFEKARGRRRS GFK+ Sbjct: 1 MGIDLKAGGRRVGHSSSMKAVKSQNPYNKLLIKLYKFLDRRTDSKFCGTVLKRLHMSKVNQPPMGLHRLSKYMAQKEGKTAVIVGKVTDDVRMLECPKMSVCALAFTENARKRIVASGGECITLDQLALRAPKGSNTVLLRGPKSREALAHFGHSTSVNNPHTHTGVKPYVRSKGRKFEKARGRRRSRGFKV 192
BLAST of NO09G02240 vs. NCBI_GenBank
Match: XP_024582914.1 (60s ribosomal protein [Plasmopara halstedii] >CEG46545.1 60s ribosomal protein [Plasmopara halstedii]) HSP 1 Score: 250.0 bits (637), Expect = 6.000e-63 Identity = 124/192 (64.58%), Postives = 155/192 (80.73%), Query Frame = 0 Query: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVLKRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI 192 MGIDL +GG+ G K RT PKSDNVYL LLV+LYRFLARRTD+ FN +VL+RL+ S TN+ P+++ ++VR MK EGK AV+V T+TDD R+L VPKL+V AL T TARARI++AGGE L+FD+LA+RAP GTN VLLRG R +HFGH+ST+ +VHTHD+VKPY R+KGRKFE+ARGRR+S GFK+ Sbjct: 1 MGIDLVAGGKVVGKKNRTNPKSDNVYLNLLVRLYRFLARRTDAKFNDIVLRRLYQSNTNQAPLSLGKVVRFMKKHEGKIAVVVATVTDDIRLLNVPKLTVVALNFTETARARIVKAGGECLSFDQLAMRAPTGTNTVLLRGARKARGVYAHFGHKSTLESVHTHDHVKPYVRSKGRKFERARGRRKSRGFKV 192 The following BLAST results are available for this feature:
BLAST of NO09G02240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02240 ID=NO09G02240|Name=NO09G02240|organism=Nannochloropsis oceanica|type=gene|length=1644bpback to top protein sequence of NO09G02240.1 >NO09G02240.1-protein ID=NO09G02240.1-protein|Name=NO09G02240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=192bpback to top Synonyms
Publications
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