NO09G02000, NO09G02000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02000 vs. NCBI_GenBank
Match: XP_020166012.1 (protein CREG1 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 142.5 bits (358), Expect = 1.400e-30 Identity = 78/180 (43.33%), Postives = 114/180 (63.33%), Query Frame = 0 Query: 22 VGRHPRPIPSQPALSGRWLMHETSWGVLSSISTLQGIEGAPFGNPQSVVDGPYHDGLLGDNSTGIPYFFVSEMDVSQVDALSNSLVSLTCSEAALANGCTLTDPESPVCIRLTVTGEMVEVVDEE--EKAFAMQALFQRHPKMEGWPTDHDWKVKKIVPRHVFVLDMFGGVKAVSVEEYL 200 V R +P PS+ A + RWL + +WGVLS+IS+ + GAPFGN S Y DG+ G+ S GIPYF+++ +D + DAL + S T SE L C DPE+P C +LT+TG++ +VVD + E A ALF +HP+MEGWP +H +++ K+ ++F++D FGG K +S +YL Sbjct: 36 VARDRKPAPSEAAATARWLAAQNTWGVLSTISS--DLSGAPFGNVVS-----YSDGVPGE-SHGIPYFYLTTLDPTARDALEDERTSFTLSEFPLGT-CGKVDPENPTCAKLTLTGKL-KVVDHKSPEADLAKTALFSKHPEMEGWPKNHHFEIFKLEIENIFLIDWFGGPKPISPSQYL 205
BLAST of NO09G02000 vs. NCBI_GenBank
Match: XP_006448789.1 (protein CREG1 [Citrus clementina] >ESR62029.1 hypothetical protein CICLE_v10016724mg [Citrus clementina]) HSP 1 Score: 141.7 bits (356), Expect = 2.400e-30 Identity = 75/175 (42.86%), Postives = 114/175 (65.14%), Query Frame = 0 Query: 27 RPIPSQPALSGRWLMHETSWGVLSSISTLQGIEGAPFGNPQSVVDGPYHDGLLGDNSTGIPYFFVSEMDVSQVDALSNSLVSLTCSEAALANGCTLTDPESPVCIRLTVTGEMVEVVDEEEKA--FAMQALFQRHPKMEGWPTDHDWKVKKIVPRHVFVLDMFGGVKAVSVEEYL 200 +P P+ A RWL+ + SWGVLS+IS+ G+ GAPFGN S DG L + +G+PYF+++ +D + +AL + SL SE L C TDPE PVC ++T+TG++V +VD KA FA ALF +HP+M+GWP DH++++ K+ +F+++ FGG K ++V++YL Sbjct: 39 KPHPNDAAAYARWLVSQNSWGVLSTISS--GLGGAPFGNVVSFSDG------LPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGT-CGKTDPEDPVCAKITLTGKLV-LVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQIFKLEIDDIFLINWFGGPKPLTVDQYL 203
BLAST of NO09G02000 vs. NCBI_GenBank
Match: XP_015971620.1 (protein CREG1 isoform X1 [Arachis duranensis]) HSP 1 Score: 141.7 bits (356), Expect = 2.400e-30 Identity = 75/185 (40.54%), Postives = 113/185 (61.08%), Query Frame = 0 Query: 15 SSVASQAVGRHPRPIPSQPALSGRWLMHETSWGVLSSISTLQGIEGAPFGNPQSVVDGPYHDGLLGDNSTGIPYFFVSEMDVSQVDALSNSLVSLTCSEAALANGCTLTDPESPVCIRLTVTGEMVEVVDEEEKAFAMQALFQRHPKMEGWPTDHDWKVKKIVPRHVFVLDMFGGVKAVSVEEYL 200 S Q + +P P A S RWL+ SWGVL++IST ++GAPFGN S DGP ++G +GIPYF+++ +D + +AL + S T SE L C DPE+P C ++T+TG++ V D +E FA +LF +H +M+GWP H+++V K+ +F++D +GG K +SV+EYL Sbjct: 24 SIAQGQFLSIQTKPDPDDSAASARWLLSLNSWGVLNTIST--DLDGAPFGNVVSFSDGPPNEG------SGIPYFYLTTLDPTARNALKDERASFTVSEYPLGT-CGNLDPENPACSKITLTGKLKLVDDSKEAEFARISLFSKHSEMKGWPEGHNFQVFKLEIEDIFLIDWYGGPKPLSVDEYL 199
BLAST of NO09G02000 vs. NCBI_GenBank
Match: XP_015971621.1 (protein CREG1 isoform X2 [Arachis duranensis] >XP_020980910.1 protein CREG1 isoform X2 [Arachis duranensis]) HSP 1 Score: 141.7 bits (356), Expect = 2.400e-30 Identity = 75/185 (40.54%), Postives = 113/185 (61.08%), Query Frame = 0 Query: 15 SSVASQAVGRHPRPIPSQPALSGRWLMHETSWGVLSSISTLQGIEGAPFGNPQSVVDGPYHDGLLGDNSTGIPYFFVSEMDVSQVDALSNSLVSLTCSEAALANGCTLTDPESPVCIRLTVTGEMVEVVDEEEKAFAMQALFQRHPKMEGWPTDHDWKVKKIVPRHVFVLDMFGGVKAVSVEEYL 200 S Q + +P P A S RWL+ SWGVL++IST ++GAPFGN S DGP ++G +GIPYF+++ +D + +AL + S T SE L C DPE+P C ++T+TG++ V D +E FA +LF +H +M+GWP H+++V K+ +F++D +GG K +SV+EYL Sbjct: 24 SIAQGQFLSIQTKPDPDDSAASARWLLSLNSWGVLNTIST--DLDGAPFGNVVSFSDGPPNEG------SGIPYFYLTTLDPTARNALKDERASFTVSEYPLGT-CGNLDPENPACSKITLTGKLKLVDDSKEAEFARISLFSKHSEMKGWPEGHNFQVFKLEIEDIFLIDWYGGPKPLSVDEYL 199
BLAST of NO09G02000 vs. NCBI_GenBank
Match: XP_016162589.1 (protein CREG1 isoform X1 [Arachis ipaensis]) HSP 1 Score: 141.7 bits (356), Expect = 2.400e-30 Identity = 75/185 (40.54%), Postives = 113/185 (61.08%), Query Frame = 0 Query: 15 SSVASQAVGRHPRPIPSQPALSGRWLMHETSWGVLSSISTLQGIEGAPFGNPQSVVDGPYHDGLLGDNSTGIPYFFVSEMDVSQVDALSNSLVSLTCSEAALANGCTLTDPESPVCIRLTVTGEMVEVVDEEEKAFAMQALFQRHPKMEGWPTDHDWKVKKIVPRHVFVLDMFGGVKAVSVEEYL 200 S Q + +P P A S RWL+ SWGVL++IST ++GAPFGN S DGP ++G +GIPYF+++ +D + +AL + S T SE L C DPE+P C ++T+TG++ V D +E FA +LF +H +M+GWP H+++V K+ +F++D +GG K +SV+EYL Sbjct: 24 SIAQGQFLSIQTKPDPDDSAASARWLLSLNSWGVLNTIST--DLDGAPFGNVVSFSDGPPNEG------SGIPYFYLTTLDPTARNALKDERASFTVSEYPLGT-CGNLDPENPACSKITLTGKLKLVDDSKEAEFARISLFSKHSEMKGWPEGHNFQVFKLEIEDIFLIDWYGGPKPLSVDEYL 199
BLAST of NO09G02000 vs. NCBI_GenBank
Match: XP_016162590.1 (protein CREG1 isoform X2 [Arachis ipaensis]) HSP 1 Score: 141.7 bits (356), Expect = 2.400e-30 Identity = 75/185 (40.54%), Postives = 113/185 (61.08%), Query Frame = 0 Query: 15 SSVASQAVGRHPRPIPSQPALSGRWLMHETSWGVLSSISTLQGIEGAPFGNPQSVVDGPYHDGLLGDNSTGIPYFFVSEMDVSQVDALSNSLVSLTCSEAALANGCTLTDPESPVCIRLTVTGEMVEVVDEEEKAFAMQALFQRHPKMEGWPTDHDWKVKKIVPRHVFVLDMFGGVKAVSVEEYL 200 S Q + +P P A S RWL+ SWGVL++IST ++GAPFGN S DGP ++G +GIPYF+++ +D + +AL + S T SE L C DPE+P C ++T+TG++ V D +E FA +LF +H +M+GWP H+++V K+ +F++D +GG K +SV+EYL Sbjct: 24 SIAQGQFLSIQTKPDPDDSAASARWLLSLNSWGVLNTIST--DLDGAPFGNVVSFSDGPPNEG------SGIPYFYLTTLDPTARNALKDERASFTVSEYPLGT-CGNLDPENPACSKITLTGKLKLVDDSKEAEFARISLFSKHSEMKGWPEGHNFQVFKLEIEDIFLIDWYGGPKPLSVDEYL 199
BLAST of NO09G02000 vs. NCBI_GenBank
Match: XP_016315691.1 (PREDICTED: protein CREG2 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 141.7 bits (356), Expect = 2.400e-30 Identity = 83/180 (46.11%), Postives = 108/180 (60.00%), Query Frame = 0 Query: 26 PRPIPSQP-----ALSGRWLMHETSWGVLSSISTLQGIEGAPFGNPQSVVDGPYHDGLLGDNSTGIPYFFVSEMDVSQVDALSNSLVSLTCSEAALANGC--TLTDPESPVCIRLTVTGEMVEVVDEEEKAFAMQALFQRHPKMEGWPTDHDWKVKKIVPRHVFVLDMFGGVKAVSVEEY 199 P IP+ P A R++ H + WG L++IST + I+G PFGN SV DGP DNSTGIPYF+V+ MD + D S SLT SEA + C + DPE P C RLT+TG+MVE V EE FA +A+F RHP M+ WP H+W K+V + V++ D GGV + +EEY Sbjct: 102 PSSIPTPPPHEEAARVARYMAHYSDWGHLATISTQEQIKGLPFGNIFSVSDGP------ADNSTGIPYFYVTPMDNTVTDLRSFPFASLTFSEAE-GDFCRKQVYDPEDPRCARLTLTGKMVE-VGPEELDFAKEAMFSRHPVMKKWPPGHNWFFMKLVLQQVWLQDWVGGVSVIPLEEY 273
BLAST of NO09G02000 vs. NCBI_GenBank
Match: XP_021905307.1 (protein CREG1 [Carica papaya]) HSP 1 Score: 141.7 bits (356), Expect = 2.400e-30 Identity = 79/196 (40.31%), Postives = 121/196 (61.73%), Query Frame = 0 Query: 6 VLVMLALILSSVASQAVGRHPRPIPSQPALSGRWLMHETSWGVLSSISTLQGIEGAPFGNPQSVVDGPYHDGLLGDNSTGIPYFFVSEMDVSQVDALSNSLVSLTCSEAALANGCTLTDPESPVCIRLTVTGEMVEVVD--EEEKAFAMQALFQRHPKMEGWPTDHDWKVKKIVPRHVFVLDMFGGVKAVSVEEYL 200 +++ L L SV + + P P A + RWL+ + SWGVL++IS+ G GAPFGN S DGP ++G +GIPYF+++ +D + +AL + SLT SE L C DPE+P C ++T+TG+++ VVD EE A ALF +HP+MEGWP H++++ K+ ++F++D FGG K ++V +YL Sbjct: 15 LVLFLVSFLDSVQGRPISMLSGPDPKDAAYTARWLVAQNSWGVLNTISSELG--GAPFGNVVSFSDGPPNEG------SGIPYFYLTALDPTARNALVDKRSSLTISEYPLGT-CGKIDPENPTCAKITLTGKLL-VVDGKSEEAEVARHALFSKHPEMEGWPKGHNFQIFKLEIENIFLIDWFGGAKPLTVYDYL 200
BLAST of NO09G02000 vs. NCBI_GenBank
Match: BAJ97143.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 141.4 bits (355), Expect = 3.200e-30 Identity = 82/198 (41.41%), Postives = 124/198 (62.63%), Query Frame = 0 Query: 7 LVMLALILSSVA---SQAVGRHPRPIPSQPALSGRWLMHETSWGVLSSISTLQGIEGAPFGNPQSVVDGPYHDGLLGDNSTGIPYFFVSEMDVSQVDALSNSLVSLTCSEAALANGCTLTDPESPVCIRLTVTGEMVEVVDEE--EKAFAMQALFQRHPKMEGWPTDHDWKVKKIVPRHVFVLDMFGGVKAVSVEEYL 200 L++LAL+L + A V + +P PS+ A + RWL + +WGVLS+IS+ + GAPFGN S Y DG+ G+ S GIPYF+++ +D + DAL + S T SE L C DPE+P C +LT+TG++ ++VD + E A ALF +HP+MEGWP +H +++ K+ ++F++D FGG K +S +YL Sbjct: 13 LLLLALLLPAPAVAGRPLVAGNRKPAPSEAAATARWLAAQNTWGVLSTISS--DLSGAPFGNVVS-----YSDGVPGE-SHGIPYFYLTTLDPTARDALEDERTSFTLSEFPLGT-CGKVDPENPTCAKLTLTGKL-KMVDHKSPETDLAKTALFSKHPEMEGWPKNHHFEIFKLEIENIFLIDWFGGPKPISPSQYL 200
BLAST of NO09G02000 vs. NCBI_GenBank
Match: ERN10696.1 (hypothetical protein AMTR_s00028p00248440, partial [Amborella trichopoda]) HSP 1 Score: 141.0 bits (354), Expect = 4.200e-30 Identity = 83/202 (41.09%), Postives = 125/202 (61.88%), Query Frame = 0 Query: 3 PASVLVMLALILSS----VASQAVGRHPRPIPSQPALSGRWLMHETSWGVLSSISTLQGIEGAPFGNPQSVVDGPYHDGLLGDNSTGIPYFFVSEMDVSQVDALSNSLVSLTCSEAALANGCTLTDPESPVCIRLTVTGEMVEVVDEEEKA-FAMQALFQRHPKMEGWPTDHDWKVKKIVPRHVFVLDMFGGVKAVSVEEYL 200 P + +L L+L S + + +V +P P+ A + RWL E SWGVLS+IS+ +G GAPFGN S DG DG GIPYF+++ +D + +AL ++ SLT SE L + C DPE+PVC +LT+TG++ V ++A FA QALF +H +M+ WP +H+++V K+ +F++D FGG K +S++EYL Sbjct: 5 PLNACYLLLLVLISFDYHIIALSVPLRQKPDPADAAATARWLASENSWGVLSTISSDKG--GAPFGNVDSFSDGWPGDG------RGIPYFYLTTLDPTARNALKDARASLTLSEFPLGS-CGKIDPENPVCSKLTLTGKLTLVDGNSKEANFAKQALFSKHAEMKEWPKNHNFQVFKLEIEDIFLIDWFGGPKPLSLDEYL 197 The following BLAST results are available for this feature:
BLAST of NO09G02000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02000 ID=NO09G02000|Name=NO09G02000|organism=Nannochloropsis oceanica|type=gene|length=612bpback to top protein sequence of NO09G02000.1 >NO09G02000.1-protein ID=NO09G02000.1-protein|Name=NO09G02000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=204bpback to top Synonyms
Publications
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