NO09G01910, NO09G01910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01910 vs. NCBI_GenBank
Match: CBN78419.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 102.4 bits (254), Expect = 1.200e-18 Identity = 58/125 (46.40%), Postives = 76/125 (60.80%), Query Frame = 0 Query: 26 PAPAPVSAPSVR-HSRSRMAPLQMGFFDSIKKGFENEAQVQPAPNAGLKNGPPIVTITFLPANKKVQAVAGQNLKDVALAAKIPIKYNCKKGECGTCEIDLNGKKVRTCVGIVPRGARKNEVTIK 150 PAPA +A + R + PL MG+ D++ K F NE + P N GLKN P +T K +QAV GQ L+DV LAAK I+Y C+KG+CGTCE ++G+K+R C IVPR K +V IK Sbjct: 39 PAPAATTAAAPRPRYQQHAGPLLMGWGDALGKAFANE-DMAPQKNPGLKNAPNTCMVTV--NGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPR--NKTKVNIK 158
BLAST of NO09G01910 vs. NCBI_GenBank
Match: XP_002184071.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44249.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 77.4 bits (189), Expect = 4.300e-11 Identity = 50/145 (34.48%), Postives = 73/145 (50.34%), Query Frame = 0 Query: 1 MFVARSSLLCVVAVVLACVSQAFIIPAPAPVSAPSVRHSRSRMAPLQMGFFDSIKKGFENEAQVQPAPNAGLKNGPPIVTITFLPANKKVQAVAGQNLKDVALAAKIPIKYNCKKGECGTCEIDLNGKKVRTCVGIVPRGARKNE 146 M+ ARS + +A+ L AF + +APS + ++ FF + F+N+ + NAGLKNGP + K AVAGQ L VA ++ I NC+KG+CGTC + LNG++V+ C +P G K E Sbjct: 2 MYTARSFIGTFLALCLIAKVTAFGVIPRTNSAAPS--------STTRLHFFGGLSNAFKNDDGLGKPQNAGLKNGPKYNDNVTVNGKKVEGAVAGQKLTAVANKVRVKIPVNCQKGDCGTCTVKLNGRQVKACSTPLPTGKAKIE 138
BLAST of NO09G01910 vs. NCBI_GenBank
Match: XP_002290679.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92431.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 77.4 bits (189), Expect = 4.300e-11 Identity = 34/93 (36.56%), Postives = 48/93 (51.61%), Query Frame = 0 Query: 48 MGFFDSIKKGFENEAQVQPAPNAGLKNGPPIVTITFLPANKKVQAVAGQNLKDVALAAKIPIKYNCKKGECGTCEIDLNGKKVRTCVGIVPRG 141 + F +K F N+ + A NAGL GP + V Q + V AA++ + YNC+ GECGTC + +NG+K+R CV VP G Sbjct: 39 LNIFGGLKDAFSNDDSLGKAKNAGLSGGPKYNENVTVNGKAVPNVVVDQKISQVCNAARVKVPYNCQNGECGTCTVKMNGRKIRACVSKVPSG 131
BLAST of NO09G01910 vs. NCBI_GenBank
Match: KOO29794.1 (hypothetical protein Ctob_000897 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 75.5 bits (184), Expect = 1.600e-10 Identity = 43/105 (40.95%), Postives = 59/105 (56.19%), Query Frame = 0 Query: 48 MGFFDSIKKGFENEAQVQPAPNAGLKNGPPIVTITFL--PANKKV-QAVAGQNLKDVALAAKIPIKYNCKKGECGTCEIDLNGKKVRTCVGIVPRGARKNEVTIK 150 MG FD +K F N+ + NAGL T+T++ KKV QA+AGQ L+DVA + IPIKY+C +G C TCE + + + CV +P +VTIK Sbjct: 1 MGMFDGLKGAFANDDTLGKRENAGLSKEKTKRTVTWVGPKGEKKVAQALAGQKLRDVARSCNIPIKYDCNEGTCKTCEAQVGSGRAKICVTKMP----DKDVTIK 101
BLAST of NO09G01910 vs. NCBI_GenBank
Match: OEU13353.1 (hypothetical protein FRACYDRAFT_189533 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 69.3 bits (168), Expect = 1.200e-8 Identity = 35/92 (38.04%), Postives = 48/92 (52.17%), Query Frame = 0 Query: 49 GFFDSIKKGFENEAQVQPAPNAGLKNGPPIVTITFLPANKKVQAVAGQNLKDVALAAKIPIKYNCKKGECGTCEIDLNGKKVRTCVGIVPRG 141 GF D+ K F N+ + N GL GP + K +AV GQ L VA ++ I NC +G+CGTC + LNGK+V+ C V +G Sbjct: 40 GFGDAFKGAFGNDDSLGEVKNEGLSGGPDYNENVTVNGKKVPKAVVGQKLTVVAGRVRVKIPVNCNQGDCGTCMVKLNGKQVKACQTKVAKG 131
BLAST of NO09G01910 vs. NCBI_GenBank
Match: XP_005758600.1 (hypothetical protein EMIHUDRAFT_219518 [Emiliania huxleyi CCMP1516] >EOD06171.1 hypothetical protein EMIHUDRAFT_219518 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 67.8 bits (164), Expect = 3.400e-8 Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 0 Query: 58 FENEAQVQPAPNAGLKNGPPIVTITFLPANKKVQ---AVAGQNLKDVALAAKIPIKYNCKKGECGTCEIDLNGKKVRTCVGIVP 139 F N+ + NAGL TIT+ ++ K + V GQ L+DVA AA IPIKY+C +G C TC++ + G V+ CVG VP Sbjct: 8 FANDDTLGARDNAGLTKEKTKRTITWKSSSGKTKQSTVVPGQKLRDVARAAGIPIKYSCNEGTCKTCQVKMGGGMVKVCVGKVP 91
BLAST of NO09G01910 vs. NCBI_GenBank
Match: XP_005764913.1 (hypothetical protein EMIHUDRAFT_120118 [Emiliania huxleyi CCMP1516] >EOD12484.1 hypothetical protein EMIHUDRAFT_120118 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 67.0 bits (162), Expect = 5.800e-8 Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 0 Query: 42 RMAPLQMGFFDSIKKGFENEAQVQPAPNAGLKNGPPIVTITF---LPAN----KKVQAVAGQNLKDVALAAKIPIKYNCKKGECGTCEIDLNGKKVRTCVGIVPRGARKNEVTIK 150 R A ++MG FD++ + +N+ + AGL + TIT+ P N + V GQ L DVA + IPIKY+C +G C C++ ++G++V CV +K +VTI+ Sbjct: 34 RRAAVRMGLFDALAESMKNDETLGKREGAGLSKEVELKTITWKGPKPDNFWEQQPVSTSQGQKLADVARQSGIPIKYSCMEGHCRVCDVVVDGRRVPACVA----RCQKKDVTIE 144
BLAST of NO09G01910 vs. NCBI_GenBank
Match: XP_005768218.1 (hypothetical protein EMIHUDRAFT_119258 [Emiliania huxleyi CCMP1516] >EOD15789.1 hypothetical protein EMIHUDRAFT_119258 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 67.0 bits (162), Expect = 5.800e-8 Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 0 Query: 42 RMAPLQMGFFDSIKKGFENEAQVQPAPNAGLKNGPPIVTITF---LPAN----KKVQAVAGQNLKDVALAAKIPIKYNCKKGECGTCEIDLNGKKVRTCVGIVPRGARKNEVTIK 150 R A ++MG FD++ + +N+ + AGL + TIT+ P N + V GQ L DVA + IPIKY+C +G C C++ ++G++V CV +K +VTI+ Sbjct: 34 RRAAVRMGLFDALAESMKNDETLGKREGAGLSKEVELKTITWKGPKPDNFWEQQPVSTSQGQKLADVARQSGIPIKYSCMEGHCRVCDVVVDGRRVPACVA----RCQKKDVTIE 144
BLAST of NO09G01910 vs. NCBI_GenBank
Match: CEM13725.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 65.9 bits (159), Expect = 1.300e-7 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0 Query: 78 IVTITFLPANKKVQAVAGQNLKDVALAAKIPIKYNCKKGECGTCEI----DLNGK--KVRTC---VGIVPR 140 +VTITF P+ K ++A G++L ++ KIP+KYNCKKG+C TCE D NG+ K+R C VG +P+ Sbjct: 67 MVTITFEPSKKAIEAKPGESLAEICAKNKIPVKYNCKKGQCATCESTLRNDKNGRTQKIRPCIYTVGSLPK 137
BLAST of NO09G01910 vs. NCBI_GenBank
Match: CBJ30370.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 64.3 bits (155), Expect = 3.700e-7 Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 0 Query: 74 NGPPIVTITFLPANKKVQAVAGQNLKDVALAAKIPIKYNCKKGECGTCEIDLNGKKVRTCVGIVPRGA 142 N + +TF P KK +A G LK VA A Y C++G+CGTCE +NGKK+R C+G +P GA Sbjct: 34 NSLSMADVTF-PGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGA 100 The following BLAST results are available for this feature:
BLAST of NO09G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01910 ID=NO09G01910|Name=NO09G01910|organism=Nannochloropsis oceanica|type=gene|length=1548bpback to top protein sequence of NO09G01910.1 >NO09G01910.1-protein ID=NO09G01910.1-protein|Name=NO09G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=153bpback to top Synonyms
Publications
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