NO09G01880, NO09G01880 (gene) Nannochloropsis oceanica

Overview
NameNO09G01880
Unique NameNO09G01880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2569
Alignment locationchr9:586317..588885 +

Link to JBrowse

Properties
Property NameValue
Description24-sterol c-methyltransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:586317..588885 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006694steroid biosynthetic process
GO:0008152metabolic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR030384MeTrfase_SMT
IPR013705Sterol_MeTrfase_C
IPR013216Methyltransf_11
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO09G01880 vs. NCBI_GenBank
Match: EWM27618.1 (24-sterol c-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 669.1 bits (1725), Expect = 9.100e-189
Identity = 324/384 (84.38%), Postives = 347/384 (90.36%), Query Frame = 0
Query:    1 MCRTTTLRFPLLPILVACASTLAHKQLSSFPEHGHFAVAALIIALGFGCYALLSLLLLTTCESDPISETRKLMGKFTCQEAKQGIKVDSVIDDYNRLQSDAHTTQKDRNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSIRRHEYYLASRLDNLQTGASLLDCGCGVGGPMRNISRFTGAKITGVTINKYQVTRGNELNAQAGLEAMCKSVHGDFMALPFPDCSFDGVYAIEATCHAPDRTRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPDTAQTHEMDAALKQVGFTLIESKDMAVEMTEEELNAGGKTWYHPLTPSYNVLSQRFQFTPVGMPLTTMLLKMLEFMRLAPTGTSK 385
            M  T+  RFPLLPILV+CAS LAHKQLSSFPEHG  AV AL+ A  FG YA+LSLLL  TCESDP+SET+KLM KFTCQE+KQGIKVDSVID YN+LQ DAHTTQ DRNS+YSALVNAYYDLATLFYEWGWGQSFHFANQ RDENF+QSIRRHEYYLASRLDNL+TGA LLDCGCGVGGPMRNI+RFTG  +TGVTINKYQV RGNELNAQAGLE +C+SV GDFM LPFPD SFDGVYAIEATCHAPDRT+VFAEIFRVLKPGQ FACYEWCLTDK+DK +PAHR IKKQIEEGDGLPDTA THEMDAAL+ VGF LIE++DMA+EMT EEL AGG+TWYHPLTPSYNVLSQRFQFTPVGMPLTT LLK LEFMRLAPTGTSK
Sbjct:    1 MSSTSGSRFPLLPILVSCASALAHKQLSSFPEHGRVAVVALVFAFCFGLYAILSLLLNMTCESDPLSETQKLMAKFTCQESKQGIKVDSVIDGYNKLQDDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDNLRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSK 384          
BLAST of NO09G01880 vs. NCBI_GenBank
Match: CBN76684.1 (Sterol methyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 441.0 bits (1133), Expect = 4.000e-120
Identity = 220/378 (58.20%), Postives = 270/378 (71.43%), Query Frame = 0
Query:   44 ALGFGCYALLSLLLLTTCE----SDPISETRKLMGKFTCQEAKQGIKVDSVIDDYNRLQSDAHTTQKDRNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSIRRHEYYLASRLDNLQTGASLLDCGCGVGGPMRNISRFTGAKITGVTINKYQVTRGNELNAQAGLEAMCKSVHGDFMALPFPDCSFDGVYAIEATCHAPDRTRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPDTAQTHEMDAALKQVGFTLIESKDMAVEMTEEELNAGGKTWYHPLTPSYNVLSQRFQFTPVGMPLTTMLLKMLEFMRLAPTGTSKVQTMLQQGAIGLAKGGEKGIFTPMYLCVARKPL 418
            AL   C  L+ L     C     +DP+  T   +  F  QE  +GIKVDS I +YNRL  D  ++ ++R  SY+ LVNAYY+LATLFYEWGWG SFHFA++ R+E+F+ SI+RHEYYL  RL  +  GA +LDCGCG+GGP RNI++FTGA ITG+TIN+YQV RGNE+N   G++  C+S+ GDFM LPF D SFDGVYAIEATCHAP R  V++EI+RVLKPG  FACYEWCLTDK+D SN  HR IKKQIEEGDGLPD     E+D+ALK  GF ++E++D A++      N GG  WY PLTPS+NV +QRFQF  +GM LT   L ++E   LAP GT+KVQ MLQ G +G A+GG  G FTPMYL V RKPL
Sbjct:   43 ALTLACSTLVVLKHEVFCRLVYATDPLEVTWTFIRGFFGQEKGRGIKVDSWITEYNRLHDDNESSVEEREGSYAKLVNAYYELATLFYEWGWGSSFHFASRWRNESFQDSIKRHEYYLGGRL-GVSRGAKVLDCGCGIGGPYRNIAQFTGADITGITINEYQVKRGNEVNKNMGVDQQCRSIQGDFMKLPFEDNSFDGVYAIEATCHAPQREGVYSEIYRVLKPGCVFACYEWCLTDKFDASNDKHRLIKKQIEEGDGLPDMITPPEVDSALKASGFEILETRDAALDP-----NPGGIPWYQPLTPSWNVFTQRFQFNWLGMRLTKAALYVMEMFYLAPAGTNKVQAMLQAGGMGCAQGGLTGTFTPMYLAVCRKPL 414          
BLAST of NO09G01880 vs. NCBI_GenBank
Match: XP_005841951.1 (sterol methyltransferase [Guillardia theta CCMP2712] >EKX54971.1 sterol methyltransferase [Guillardia theta CCMP2712])

HSP 1 Score: 404.4 bits (1038), Expect = 4.200e-109
Identity = 194/333 (58.26%), Postives = 249/333 (74.77%), Query Frame = 0
Query:   85 IKVDSVIDDYNRLQSDAHTTQKDRNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSIRRHEYYLASRLDNLQTGASLLDCGCGVGGPMRNISRFTGAKITGVTINKYQVTRGNELNAQAGLEAMCKSVHGDFMALPFPDCSFDGVYAIEATCHAPDRTRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPDTAQTHEMDAALKQVGFTLIESKDMAVEMTEEELNAGGKTWYHPLTPSYNVLSQRFQFTPVGMPLTTMLLKMLEFMRLAPTGTSKVQTMLQQGAIGLAKGGEKGIFTPMYLCVARKPL 418
            I V+  ID+YN L          RN +Y+ LVNAYY+L+TLFYE GWG SFHF+ ++  E+F + +RRHEYYL S L  L+ G+ +LD GCG+GGP+R+I+RFTG  ITG+TIN+YQV R N+L A+ GL   C+++ GDF+A+P  + SFDGVYAIEATCHAPDR +V++E+FRVLKPG  FACYEWCLT+KYDK+N  HR IKK+IEEGD LPD A THE+D A++  GF ++ ++DM+++  ++        WYHPL PS+N   QRFQF PVG+ LTT  L++LEF+ LAP GTSK+QTMLQQG IG  KGG+  IFTPMYL V RKPL
Sbjct:    8 IVVNKWIDEYNDLHKGEEPDA--RNVAYAKLVNAYYELSTLFYEVGWGTSFHFSYRMAGESFSEGMRRHEYYLTSFLGGLKPGSKVLDVGCGIGGPLRSITRFTGWDITGITINEYQVNRCNQLAARQGLSGQCRAILGDFLAIPAANNSFDGVYAIEATCHAPDRRKVYSEVFRVLKPGGYFACYEWCLTNKYDKNNQYHRWIKKKIEEGDALPDMAYTHEIDDAMRSSGFDILHTRDMSLDPNQK------FPWYHPLLPSWNPFVQRFQFNPVGLFLTTWGLRLLEFLWLAPKGTSKIQTMLQQGGIGCVKGGQNEIFTPMYLVVCRKPL 332          
BLAST of NO09G01880 vs. NCBI_GenBank
Match: XP_009037888.1 (hypothetical protein AURANDRAFT_59110 [Aureococcus anophagefferens] >EGB07255.1 hypothetical protein AURANDRAFT_59110 [Aureococcus anophagefferens])

HSP 1 Score: 377.9 bits (969), Expect = 4.200e-101
Identity = 189/328 (57.62%), Postives = 232/328 (70.73%), Query Frame = 0
Query:   91 IDDYNRLQSDAHTTQKDRNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSIRRHEYYLASRLDNLQTGASLLDCGCGVGGPMRNISRFTGAKITGVTINKYQVTRGNELNAQAGLEAMCKSVHGDFMALPFPDCSFDGVYAIEATCHAPDRTRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPDTAQTHEMDAALKQVGFTLIESKDMAVEMTEEELNAGGKTWYHPLTPSYNVLS-QRFQFTPVGMPLTTMLLKMLEFMRLAPTGTSKVQTMLQQGAIGLAKGGEKGIFTPMYLCVARKPL 418
            ID YN+LQ        +RN+ Y+ALV++YYDLAT FYEWGWG  FHFA++   E F QS+ RHEYYLASRL  +  GA +LDCGCG+GGPMRNI+RFT A++TG+TIN++QV RGN L A  G+  + KSV GDFMALPFP+ SFDGVYAIEATCHAPDR + + EI+RVLKPG  FACYEWCLTD YD S   H+++KK IE GDGLPD   T    AAL+  GF ++E++D A     + +  GG  W+ PL PS++ L   RFQF PV   L   +L   E +RL P GTSK Q MLQ G +G A+GG  G FTPM+L VA+KPL
Sbjct:   29 IDGYNKLQEG--DDAGERNTEYAALVDSYYDLATEFYEWGWGACFHFADRRGGETFAQSLLRHEYYLASRL-AVSAGAKVLDCGCGIGGPMRNIARFTRAQVTGITINQFQVDRGNALCASEGVAHLAKSVQGDFMALPFPEASFDGVYAIEATCHAPDRAKCYGEIYRVLKPGATFACYEWCLTDAYDGSE-RHKKLKKDIEVGDGLPDLCHTSVCTAALEAAGFDVVEARDCAA----DGMLDGGDPWHMPLVPSWHPLKWPRFQFNPVMYFLMPKILSFFELIRLVPAGTSKTQVMLQAGGVGCAEGGITGAFTPMWLMVAKKPL 348          
BLAST of NO09G01880 vs. NCBI_GenBank
Match: EJK49936.1 (hypothetical protein THAOC_31140 [Thalassiosira oceanica])

HSP 1 Score: 370.9 bits (951), Expect = 5.100e-99
Identity = 195/388 (50.26%), Postives = 249/388 (64.18%), Query Frame = 0
Query:   87 VDSVIDDYNRLQSDAHTTQKDRNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSIRRHEYYLASRL------------------------DNLQTGAS-------LLDCGCGVGGPMRNISRFTGAKITGVTINKYQVTRGNEL--------NAQA-GLEAM-CKSVHGDFMALPFPDCSFDGVYAIEATCHAPDRTRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPDTAQTHEMDAALKQVGFTLIESKDMA----------------VEMTEEELNAGGKTWYHPLTPSYNVLSQRFQFTPVGMPLTTMLLKMLEFMRLAPTGTSKVQTMLQQGAIGLAKGGEKGIFTPMYLCVARKPL 418
            V+S + +Y RL +++ T   +RN++YS LVN+YYDLATLFYEWGWG SFHF+N+   E+F ++ RRHE+YLAS+L                        D  + G++       ++D GCG+GGPMRNI +FTGA +TG+T+N+YQV RGNEL        NA++ GL  + C+SV GDFM  PF D ++D  YAIEATCHAPDR   ++EI+RVLKPG  FACYEWCLTD+YD  N  H  IKKQIEEGDGLPD A TH    ALK+ GF ++E +D                   +    + N GGK W  PL PS+N  +QRFQF   G+ LT   LK++EF+RLAP GTS+ Q +LQ G +GLA+GGE GIFTPMYL V R PL
Sbjct:  166 VESSVGEYERLHANS-TGVDERNTNYSNLVNSYYDLATLFYEWGWGASFHFSNRHPHESFDEATRRHEFYLASKLNLSGALGRIGGDKRAAMNGDYKETDEAREGSTPSMANVKIIDVGCGIGGPMRNICKFTGADVTGLTLNQYQVDRGNELCKSDPHFANAKSDGLPTVRCRSVQGDFMKQPFDDSTYDAAYAIEATCHAPDRVGCYSEIYRVLKPGAVFACYEWCLTDRYDPENEEHVLIKKQIEEGDGLPDIASTHHCLTALKKAGFEILEERDCVNDEYGGWQDRATGEYRSDKEGRKHNRGGKPWMLPLMPSWNPFTQRFQFNWFGLRLTKYSLKVMEFLRLAPAGTSRTQILLQSGGMGLARGGELGIFTPMYLMVGRVPL 552          
BLAST of NO09G01880 vs. NCBI_GenBank
Match: XP_005767411.1 (sterol methyltransferase [Emiliania huxleyi CCMP1516] >EOD14982.1 sterol methyltransferase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 366.7 bits (940), Expect = 9.700e-98
Identity = 193/358 (53.91%), Postives = 237/358 (66.20%), Query Frame = 0
Query:   59 TTCESDPISETRKLMGKFTCQEAKQGIKVDSVIDDYNRLQSDAHTTQKD-RNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSIRRHEYYLASRLDNLQTGASLLDCGCGVGGPMRNISRFTGAKITGVTINKYQVTRGNELNAQAGLEAMCKSVHGDFMALPFPDCSFDGVYAIEATCHAPDRTRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPDTAQTHEMDAALKQVGFTLIESKDMAVEMTEEELNAGGKTWYHPLTPSYNVLSQRFQFTPVGMPLTTMLLKMLEFMRLAPTGTSKVQTMLQQGAIGLAKGGEKGIFTPMYLCVARK 416
            +T +     + R+ MG  + QEAKQGIKV S ID YN  Q D H    + R   Y+ LVN YY+LAT FYE GWGQSFHFAN+   E F +SI RHEYYLA+RL  +Q   S+LDCGCG+GGP+RN+ RFTGA ITGVT+N+YQV RGN L  +AGL   CK V  DF  LPFPD SFD VY+IEA CH+PDR  V+ EI+RVLKPG  F  YEWCLT K+   +  H   KK IEEGDGLPD   T   D +L +VGF ++E++D A++      N GG+ WY  LTPS+  L  R QFT +G     + +  LE +RLAP G+ KV+ ML+QG +GL  GGE G FTPMY   A+K
Sbjct:    3 STLQQTTAGKVRQFMGAASKQEAKQGIKVGSDIDRYNN-QHDLHGGDAEARKEGYADLVNTYYNLATDFYEIGWGQSFHFANKFAGETFNESITRHEYYLAARL-GIQPSDSVLDCGCGIGGPLRNLGRFTGASITGVTLNQYQVDRGNGLCTKAGLAPRCKLVKADFHKLPFPDNSFDHVYSIEACCHSPDRADVYREIYRVLKPGGCFVSYEWCLTKKHRDGDAQHMLSKKLIEEGDGLPDMMSTTHCDDSLVKVGFQVVETRDAALDP-----NPGGEAWYVILTPSFFNLF-RLQFTAIGTFFINVFMTCLEALRLAPAGSGKVREMLRQGQLGLVMGGEMGTFTPMYYIHAKK 352          
BLAST of NO09G01880 vs. NCBI_GenBank
Match: XP_002292358.1 (sterol 24-C-methyltransferase, partial [Thalassiosira pseudonana CCMP1335] >EED90333.1 sterol 24-C-methyltransferase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 365.2 bits (936), Expect = 2.800e-97
Identity = 190/348 (54.60%), Postives = 238/348 (68.39%), Query Frame = 0
Query:   87 VDSVIDDYNRLQSDAHTTQKDRNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSIRRHEYYLASRLDNLQTGAS--LLDCGCGVGGPMRNISRFTGAKITGVTINKYQVTRGNEL-----------NAQAGLEAM-CKSVHGDFMALPFPDCSFDGVYAIEATCHAPDRTRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPDTAQTHEMDAALKQVGFTLIESKDMAVEMTEEELNAGGKTWYHPLTPSYNVLSQRFQFTPVGMPLTTMLLKMLEFMRLAPTGTSKVQTMLQQGAIGLAKGGEKGIFTPMYLCVARKPLGKE 421
            V S + +Y RL   + T+  +RNS+Y+ LVN+YYDLATLFYEWGWG SFHF+N+   E+F ++ RRHE+YLA +  +  + AS  +LD GCG+GGPMRNI +FTGA ITG+T+N+YQV RGNEL           +   GL  + C+S  GDFM  PF   +FD  YAIEATCHAPDR   ++EI+RVLKPG  FACYEWCLTDKYD +N  H  IKKQIEEGDGLPD A TH    ALK+ GF ++E +D    + +E L         PL  S+N  +QRFQF   G+ LT   LK++EF+RLAP GTS+ Q +LQ G +GLA+GGE GIFTPMYL V R PL K+
Sbjct:    3 VQSSVSEYERLHLTS-TSTTERNSNYATLVNSYYDLATLFYEWGWGASFHFSNRHPHESFDEATRRHEFYLAMKEGSTPSMASVKVLDVGCGIGGPMRNICKFTGADITGLTLNQYQVDRGNELCRADAHFHNHSSETNGLPPIRCRSTQGDFMKQPFEASTFDAAYAIEATCHAPDRVGCYSEIYRVLKPGSIFACYEWCLTDKYDPNNEEHVLIKKQIEEGDGLPDIATTHYCLTALKKAGFEILEERDC---VNDEML---------PLMSSWNPFTQRFQFNWFGLRLTKYSLKIMEFLRLAPVGTSRTQILLQSGGMGLARGGELGIFTPMYLMVGRVPLDKK 337          
BLAST of NO09G01880 vs. NCBI_GenBank
Match: KOO27041.1 (24-sterol c-methyltransferase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 362.8 bits (930), Expect = 1.400e-96
Identity = 179/331 (54.08%), Postives = 230/331 (69.49%), Query Frame = 0
Query:   91 IDDYNRLQSDAHTTQKDRNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSIRRHEYYLASRLDNLQTGASLLDCGCGVGGPMRNISRFTGAKITGVTINKYQVTRGNELNAQAGLEAMCKSVHGDFMALPFPDCSFDGVYAIEATCHAPDRTRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPDTAQTHEMDAALKQVGFTLIESKDMAVEMTEEELNAGGKTWYHPLTPSYNVLSQ----RFQFTPVGMPLTTMLLKMLEFMRLAPTGTSKVQTMLQQGAIGLAKGGEKGIFTPMYLCVARKPL 418
            ID YN L  D  T+ + RN++Y  LVN+YY+LAT FYEWGWGQSFHFA +L+ E+F  SI RHEYYLA RL  ++    +LDCGCG+GGP+RNI RFT AK+TGVT+N+YQV RGN L  +A L+  C+ V  DF  LPF + +F+  Y+IEA CH+PDR  V++E+FRVLKPG  FA YEWCLT+K+D  N  H   KK+IEEGDGLP    T   DAALK+ GF +IES+D A++      N GG+ WY  LT SYN+ S+    R QFT  G  +  ++L  +EF+ +AP G+ KV+ ML+Q  +GL  GGE G FTPMY+ + RKPL
Sbjct:   62 IDKYNALHDDKKTSVEGRNAAYVDLVNSYYNLATDFYEWGWGQSFHFAERLQGEDFGMSIARHEYYLAMRL-GIKPSDHVLDCGCGIGGPLRNIGRFTSAKVTGVTLNQYQVDRGNRLCQEAHLDDRCRLVQADFHKLPFAEATFNSCYSIEACCHSPDRVDVYSEVFRVLKPGGYFASYEWCLTEKHDPLNERHVWSKKKIEEGDGLPGLTLTTSCDAALKRAGFEIIESRDAALDP-----NPGGEPWYKILTASYNLASREGLFRLQFTYWGTFMMNIVLNFMEFVGIAPRGSGKVREMLRQAQLGLVAGGEMGTFTPMYVVIGRKPL 386          
BLAST of NO09G01880 vs. NCBI_GenBank
Match: GAX11719.1 (sterol 24-C-methyltransferase [Fistulifera solaris])

HSP 1 Score: 352.1 bits (902), Expect = 2.500e-93
Identity = 184/371 (49.60%), Postives = 237/371 (63.88%), Query Frame = 0
Query:   51 ALLSLLLLTTCESDPISETRKLMGKFTCQEAK--QGIKVDSVIDDYNRLQSDAHTTQKDRNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSIRRHEYYLASRLDN---LQTGASLLDCGCGVGGPMRNISRFTGAKITGVTINKYQVTRGNELNAQAGLEAMCKSVHGDFMALPFPDCSFDGVYAIEATCHAPDRTRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPDTAQTHEMDAALKQVGFTLIESKDMAVEMTEEELNAGGKTWYHPLTPSYNVLSQRFQFTPVGMPLTTMLLKMLEFMRLAPTGTSKVQTMLQQGAIGLAKGGEKGIFTPMYLCVARKP 417
            +++++ L T+  +DPI        + +  E +   G  V++ +D YN L S   T+  +RN  YS+LVN+YYDLAT+FYEWGWG SFHF+ Q   E+F QSI+RHEY LA+ L +         +LD GCGVGGPMRN+ +F  AKITG+T+N YQV RGNELN + GL     SV GDFM LPF + +FDG YAIEATCHAPDR   + +I+  LKPG  FACYEWCLTD++D +N  H ++K+ IE G+GLPD   T     AL+  GF  I  KD+A       L    + WY PL PS+N LSQRFQF  +G  LT +++  LEF  LAP GT K Q +LQ G   L   G++G+FT MYL V RKP
Sbjct:   33 SVMAVQLFTS--ADPIGRCFTFWRQLSAHEKRLTSGESVNNSVDKYNELHSTT-TSTNERNEQYSSLVNSYYDLATVFYEWGWGSSFHFSYQYPKESFHQSIQRHEYQLAAHLGSRCLSDPSTHILDVGCGVGGPMRNLCQFVAAKITGITLNPYQVQRGNELNQKTGLSHRATSVQGDFMQLPFENETFDGAYAIEATCHAPDRVACYQQIYDKLKPGAVFACYEWCLTDRFDPNNAEHVRMKRDIELGNGLPDITTTTVCWEALQAAGFEPIVEKDLA-------LTPNVQVWYTPLLPSWNPLSQRFQFNWLGAILTNIMIYSLEFFWLAPKGTIKTQKVLQAGGFALRDAGKEGLFTAMYLMVGRKP 393          
BLAST of NO09G01880 vs. NCBI_GenBank
Match: GAX20778.1 (sterol 24-C-methyltransferase [Fistulifera solaris])

HSP 1 Score: 350.5 bits (898), Expect = 7.200e-93
Identity = 183/371 (49.33%), Postives = 237/371 (63.88%), Query Frame = 0
Query:   51 ALLSLLLLTTCESDPISETRKLMGKFTCQEAK--QGIKVDSVIDDYNRLQSDAHTTQKDRNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSIRRHEYYLASRLDN---LQTGASLLDCGCGVGGPMRNISRFTGAKITGVTINKYQVTRGNELNAQAGLEAMCKSVHGDFMALPFPDCSFDGVYAIEATCHAPDRTRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPDTAQTHEMDAALKQVGFTLIESKDMAVEMTEEELNAGGKTWYHPLTPSYNVLSQRFQFTPVGMPLTTMLLKMLEFMRLAPTGTSKVQTMLQQGAIGLAKGGEKGIFTPMYLCVARKP 417
            +++++ L T+  +DPI        + +  E +   G  V+  +D YN L S A T+  +RN  YS+LVN+YYDLAT+FYEWGWG SFHF+ Q   E+F+ SI+RHEY LA+ L +         +LD GCGVGGPMRN+  F  A+ITG+T+N YQV RGNELN +AGL     SV GDFM LPF + +FDG YAIEATCHAPDR   + +I+  LKPG  FACYEWCLTD++D +N  H ++K+ IE G+GLPD   T     AL+  GF  +  KD+A       L    + WY PL PS+N LSQRFQF  +G  LT +++  LEF  LAP GT K Q +LQ G   L   G++G+FT MYL V RKP
Sbjct:   33 SVMAVQLFTS--ADPIGRCFTFWRQLSAHEKRLTSGESVNKSVDKYNELHS-ASTSTDERNEQYSSLVNSYYDLATVFYEWGWGSSFHFSYQYPAESFQHSIQRHEYQLAAHLGSRCLSDPSTHILDVGCGVGGPMRNLCHFVAAQITGITLNPYQVQRGNELNHKAGLSHRATSVQGDFMQLPFDNETFDGAYAIEATCHAPDRVACYKQIYDKLKPGAVFACYEWCLTDRFDPNNAEHVRMKRDIELGNGLPDITTTKVCWEALQAAGFEPVVEKDLA-------LTPNVQVWYTPLLPSWNPLSQRFQFNWLGAILTNIMIYSLEFFWLAPKGTIKTQKVLQAGGFALRDAGKEGLFTAMYLMVGRKP 393          
The following BLAST results are available for this feature:
BLAST of NO09G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27618.19.100e-18984.3824-sterol c-methyltransferase [Nannochloropsis gad... [more]
CBN76684.14.000e-12058.20Sterol methyltransferase [Ectocarpus siliculosus][more]
XP_005841951.14.200e-10958.26sterol methyltransferase [Guillardia theta CCMP271... [more]
XP_009037888.14.200e-10157.62hypothetical protein AURANDRAFT_59110 [Aureococcus... [more]
EJK49936.15.100e-9950.26hypothetical protein THAOC_31140 [Thalassiosira oc... [more]
XP_005767411.19.700e-9853.91sterol methyltransferase [Emiliania huxleyi CCMP15... [more]
XP_002292358.12.800e-9754.60sterol 24-C-methyltransferase, partial [Thalassios... [more]
KOO27041.11.400e-9654.0824-sterol c-methyltransferase [Chrysochromulina sp... [more]
GAX11719.12.500e-9349.60sterol 24-C-methyltransferase [Fistulifera solaris... [more]
GAX20778.17.200e-9349.33sterol 24-C-methyltransferase [Fistulifera solaris... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL121nonsL121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR128ngnoR128Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010683NSK010683Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01880.1NO09G01880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588865gene_4363Nannochloropsis oceanica (N. oceanica CCMP1779)gene
SMT2gene2942Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01880.1NO09G01880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01880 ID=NO09G01880|Name=NO09G01880|organism=Nannochloropsis oceanica|type=gene|length=2569bp
AAATAACAGAGTTAGGGCAAAAGAACCGGTCGGACTTGCCACGGACTTGA
CAGACGCCTCTGGTCACAGCGTCCTTGTGTGTCCCACGCAAACTCCATCA
TGTGCAGGACCACCACACTACGATTCCCCCTCCTGCCAATCCTGGTGGCT
TGCGCTTCCACACTTGCCCACAAGCAGCTTTCGTCCTTCCCCGAGCATGG
CCATTTCGCAGTGGCAGCGCTCATCATCGCTCTAGGCTTCGgtatgtttt
tttctgttagggctcgagaggcgcagatttagtttgcatgtcatgattat
tagtcgactttattcgactgacacgggttgatcaactttgccgaggcagc
tgtaggcgctatgttcctccttttacagtactgccgctttgcgtatgttc
ctcattttctctctcaccctccttccctccctccaagGCTGCTATGCCCT
CCTTTCTCTTCTCCTCCTTACCACCTGCGAGTCCGATCCTATATCAGAAA
CACGAAAACTGATGGGGAAATTTACATGCCAAGAAGCGAAGCAAGGGATA
AAGGTTGACAGTGTAATTGATGATTATAATCGGTTACAAAGTGACGCGCA
CACAACTCAAAAAGACCGGAATAGCAGCTATTCGGCATTAGTGAATGCGT
ACTATGgtgagtgagaacaagcaggcagaagggagcgagaaaggaagtgt
agaagtggggatcgtaaagctaatggcattattattttccttaccatttg
tttctcctcacatatcaaacatccccttttcttccctcattttagACCTG
GCGACATTGTTTTACGAATGGGGATGGGGTCAGTCTTTTCATTTCGCAAA
CCAGCTCCGAGACGAGAATTTCAAGCAGAGCATTCGGCGGCATGAATATT
ACCTGGCTTCGCGGTTGGATAATTTGCAGACGGGTGCGAGTTTGTTGGAT
TGCGGGTGTGGCGTGGGCGGGCCGATGAGgtatgattctgatttgttgtg
tcctcttttcaggtctcactgctacttgtcatgtttttgaaacgatcttc
gcttcgagacctccctccctccctctcttatcttctaccctaccagGAAT
ATCTCCCGTTTTACTGGAGCCAAGATCACAGGTGTAACCATCAACAAATA
TCAAGTCACGCGTGGGAACGAGCTGAATGCTCAAGCGGGGCTGGAGGCGA
TGTGTAAAAGTGTACACGGAGACTTCATGGCACTGCCGTTTCCCGACTGC
TCGTTTGATGGGGTGTATGCGATTGAAGCGACGTGCCATGCACCCGACCG
GACGAGGGTTTTTGCAGAGATTTTCCGGGTGCTCAAACCCGGGCAGAATT
TTGCCTGCTACGAATGGTGCTTGACCGgtgagtttccctagtctcttttt
tttgttaacgctgtctcggtattggtaaatgcctccccagcatagatgta
agtcgccactcatccgtcgtcgccttcatttcgacatctattccctcctt
ccctccttcccctcccagACAAATATGACAAATCCAATCCTGCGCACCGC
CAAATCAAAAAGCAAATTGAAGAAGGCGATGGGTTGCCCGACACGGCTCA
AACCCACGAAATGGACGCCGCGCTAAAACAAGTCGGCTTCACTTTAATTG
AAAGCAAGGACATGGCCGTAGAAATGACCGAGGAGGAGTTAAACGCAGGA
GGAAAAACGTGGTATCACCCATTGACCCCGTCCTACAACGTGCTCTCTCA
ACGGTTTCAGTTTACCCCGGTGGGAATGCCGTTGACAACGATGCTTTTGA
AGATGTTGGAATTTATGCGATTAGCCCCGACAGGAACTAGCAAGGTGCAA
ACTATGCTACAGCAAGGGGCGATTGGTCTAGCCAAAGGGGGAGAAAAAGG
CATTTTTACCCCGATGTATCTATGTGTAGCACGCAAGCCGCTGGGGAAAG
AGTGAGGGAAAGGCTGAAGGAAGGTAAGAAGAAGGAATAGAGGGAATTGA
GTAGAGAAGGAAGAAGAGAAGAAATAAGAGCAGATAGTAATGCACAACAA
CAAGAACAACAGCAACAGCAAGGAATGAGGGTTTAAAGGAAGAGGAGGAA
GAGGAGGAGGAGGACATAAGGGCGGACGATGGTCTGCATGTATTCCGCAG
TTGTTTTTTGTTGGCAAATAGAGACGGAGAAGTTGAATGGGAAAGGTAGG
AAAAGAAGGCTAAAGCAGGAGGAGATGGAAAAGAGATAATATCTTTATCT
GCTCGTGTGGGCGTGTGTACGTAAAGATTTATTATCTCTCCGCGGTCAAA
CAAGGAAGCGAAATTAGAACAACAATTTATAACCCCCGAAAACCATGAGA
GCGCGCGGATAGTAGTAAGAAATCAAGAATGGAAACAGTTTAAACCAGAT
CCTTGAGTCCAAGAGCAGGTACGAATGTGAAAGAGGGAAATTTAACCAAA
GATAATTCAAAAATTAAATTTAAAAAAGGCCTCGATCAGGCGAGGACCGG
GAAGGAAGAAAAAAGAGATATGAAGAAAAAGGGCAAGTTGCATTAAGTAT
TCTCCTTTCCTCCTTTTCC
back to top

protein sequence of NO09G01880.1

>NO09G01880.1-protein ID=NO09G01880.1-protein|Name=NO09G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=421bp
MCRTTTLRFPLLPILVACASTLAHKQLSSFPEHGHFAVAALIIALGFGCY
ALLSLLLLTTCESDPISETRKLMGKFTCQEAKQGIKVDSVIDDYNRLQSD
AHTTQKDRNSSYSALVNAYYDLATLFYEWGWGQSFHFANQLRDENFKQSI
RRHEYYLASRLDNLQTGASLLDCGCGVGGPMRNISRFTGAKITGVTINKY
QVTRGNELNAQAGLEAMCKSVHGDFMALPFPDCSFDGVYAIEATCHAPDR
TRVFAEIFRVLKPGQNFACYEWCLTDKYDKSNPAHRQIKKQIEEGDGLPD
TAQTHEMDAALKQVGFTLIESKDMAVEMTEEELNAGGKTWYHPLTPSYNV
LSQRFQFTPVGMPLTTMLLKMLEFMRLAPTGTSKVQTMLQQGAIGLAKGG
EKGIFTPMYLCVARKPLGKE*
back to top
Synonyms
Publications