NO09G01760, NO09G01760 (gene) Nannochloropsis oceanica

Overview
NameNO09G01760
Unique NameNO09G01760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2468
Alignment locationchr9:547253..549720 +

Link to JBrowse

Properties
Property NameValue
DescriptionDna repair protein rad51
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:547253..549720 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0008094DNA-dependent ATPase activity
GO:0003677DNA binding
GO:0016787hydrolase activity
GO:0003677DNA binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0006281DNA repair
GO:0016043cellular component organization
GO:0009058biosynthetic process
GO:0007049cell cycle
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0000003reproduction
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR010995DNA_repair_Rad51/TF_NusA_a-hlx
IPR020587RecA_monomer-monomer_interface
IPR020588RecA_ATP-bd
IPR013632DNA_recomb/repair_Rad51_C
IPR003593AAA+_ATPase
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
[Close]
BLAST of NO09G01760 vs. NCBI_GenBank
Match: EWM27615.1 (dna repair protein rad51 [Nannochloropsis gaditana])

HSP 1 Score: 568.9 bits (1465), Expect = 9.100e-159
Identity = 284/297 (95.62%), Postives = 295/297 (99.33%), Query Frame = 0 
Query:    1 MEAGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDATKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE 298
            MEAGYCTVE++THAT+RKLTDIKGISDQKA KIKE+AYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGG+ETGSLTEIFGEFRTGKTQLCHTLCVTSQLP+DQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDV+TVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKD TKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGA+GI++AK+
Sbjct:   79 MEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375
[Close]
BLAST of NO09G01760 vs. NCBI_GenBank
Match: CBJ27144.1 (DNA repair and recombination protein Rad51A [Ectocarpus siliculosus])

HSP 1 Score: 490.7 bits (1262), Expect = 3.100e-135
Identity = 239/296 (80.74%), Postives = 271/296 (91.55%), Query Frame = 0 
Query:    2 EAGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDATKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE 298
            EAGYCTVE+++H TIRKL ++KGIS+QKA K+KE  YKLVP+GF TA+Q L  R+DLI L+TGSK+LD LL GGIETGSLTE+FGEFRTGKTQLCHTLCV  Q+PLD GGGEGKAMYIDTEGTFRPQRL AIAERFGL+ + VL+NVA+ARAHNSEQQMDLLKMASAMM+EDRYAL+V+DSATAL+RTDYCGRGELSERQMQLAQFLRQLTRM+EEFGVAVVLTNQVVANPDGMSFAKD+TKPIGGNIIAHAS TRLRLRK RG+NRICQ++DSPTL E+E QFSIG  G+++ K+
Sbjct:   48 EAGYCTVESISHCTIRKLVEVKGISEQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQMPLDAGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 343
[Close]
BLAST of NO09G01760 vs. NCBI_GenBank
Match: XP_002180445.1 (Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47853.1 Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 448.0 bits (1151), Expect = 2.300e-122
Identity = 217/295 (73.56%), Postives = 259/295 (87.80%), Query Frame = 0 
Query:    3 AGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDATKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE 298
            AGY TVE++ HATIRKL+D+KGIS+ K LK+KE+   +VPM F TAA  LE RK L+ L+TGS +LD LL GG+ETGS+TE+FGEFRTGKTQLCHTLCVT Q+ + +GG EGKA+YIDTEGTFRP RL AIAERFGLD    L+NVA+ARAHNSE Q +LLK+A+A+MS+DRYAL+VVDSATALFRTDY GRGELSERQMQ+AQFLRQLTR++EEFGVAV +TNQVVANPDGMSFAKD+TKPIGGNI+AHAS TRLRLRKGRG+NRIC ++DSPTLPEA+ QF++GA G+ +A++
Sbjct:   56 AGYHTVESIAHATIRKLSDVKGISEAKVLKLKEITKSMVPMDFKTAADALEDRKALVTLTTGSIELDKLLEGGVETGSITEVFGEFRTGKTQLCHTLCVTCQMAVTEGGAEGKAIYIDTEGTFRPNRLQAIAERFGLDPTVALENVAYARAHNSEHQAELLKLAAAIMSQDRYALLVVDSATALFRTDYTGRGELSERQMQMAQFLRQLTRLAEEFGVAVFITNQVVANPDGMSFAKDSTKPIGGNIMAHASTTRLRLRKGRGDNRICTVFDSPTLPEADAQFAVGAQGVCDAQD 350
[Close]
BLAST of NO09G01760 vs. NCBI_GenBank
Match: GAX16358.1 (DNA repair protein RAD51 [Fistulifera solaris])

HSP 1 Score: 443.4 bits (1139), Expect = 5.700e-121
Identity = 214/295 (72.54%), Postives = 257/295 (87.12%), Query Frame = 0 
Query:    3 AGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDATKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE 298
            AGY TVE++ HAT+RKLT++KGIS+ K +K+KE+   +VPM F TAA  LE RK L+ L+TGS +LD LL GGIETGS+TE+FGEFRTGKTQLCHTLC+T Q+ +  GG EGKA+YIDTEGTFRP RL AIAERFGLD    L+NVA+ARAHNSE QM+LLKMA+A+MS+DRYAL+VVDSATAL+RTDY GRGELSERQMQ+AQFLRQLTR++EEFGVAV +TNQVVA+PD MSFAKD+TKPIGGNI+AHAS TRLRLRKGRG+NRIC ++DSPTLPEA+ QF++GA G+ +A +
Sbjct:   49 AGYHTVESIAHATVRKLTEVKGISEAKVMKLKELTKSMVPMDFKTAADALEDRKSLVTLTTGSVELDKLLEGGIETGSITEVFGEFRTGKTQLCHTLCITCQMAITDGGAEGKAIYIDTEGTFRPARLQAIAERFGLDPAVALENVAYARAHNSEHQMELLKMAAAIMSQDRYALLVVDSATALYRTDYTGRGELSERQMQMAQFLRQLTRLAEEFGVAVFITNQVVASPDAMSFAKDSTKPIGGNIMAHASTTRLRLRKGRGDNRICTVFDSPTLPEADCQFAVGAQGVCDATD 343
[Close]
BLAST of NO09G01760 vs. NCBI_GenBank
Match: GAX28277.1 (DNA repair protein RAD51 [Fistulifera solaris])

HSP 1 Score: 442.2 bits (1136), Expect = 1.300e-120
Identity = 213/295 (72.20%), Postives = 257/295 (87.12%), Query Frame = 0 
Query:    3 AGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDATKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE 298
            AGY TVE++ HAT+RKLT++KGIS+ K +K+KE+   +VPM F TAA  LE RK L+ L+TGS +LD LL GGIETGS+TE+FGEFRTGKTQLCHTLC+T Q+ +  GG EGKA+YIDTEGTFRP RL AIAERFGLD    L+NVA+ARAHNSE QM+LLKMA+A+M++DRYAL+VVDSATAL+RTDY GRGELSERQMQ+AQFLRQLTR++EEFGVAV +TNQVVA+PD MSFAKD+TKPIGGNI+AHAS TRLRLRKGRG+NRIC ++DSPTLPEA+ QF++GA G+ +A +
Sbjct:   49 AGYHTVESIAHATVRKLTEVKGISEAKVMKLKELTKSMVPMDFKTAADALEDRKSLVTLTTGSVELDKLLEGGIETGSITEVFGEFRTGKTQLCHTLCITCQMAITDGGAEGKAIYIDTEGTFRPARLQAIAERFGLDPAVALENVAYARAHNSEHQMELLKMAAAIMAQDRYALLVVDSATALYRTDYTGRGELSERQMQMAQFLRQLTRLAEEFGVAVFITNQVVASPDAMSFAKDSTKPIGGNIMAHASTTRLRLRKGRGDNRICTVFDSPTLPEADCQFAVGAQGVCDATD 343
[Close]
BLAST of NO09G01760 vs. NCBI_GenBank
Match: XP_012896981.1 (uncharacterized protein [Blastocystis hominis] >XP_012896984.1 uncharacterized protein [Blastocystis hominis] >XP_012897900.1 uncharacterized protein [Blastocystis hominis] >CBK22933.2 unnamed protein product [Blastocystis hominis] >CBK22936.2 unnamed protein product [Blastocystis hominis] >CBK23852.2 unnamed protein product [Blastocystis hominis])

HSP 1 Score: 407.9 bits (1047), Expect = 2.700e-110
Identity = 199/296 (67.23%), Postives = 241/296 (81.42%), Query Frame = 0 
Query:    2 EAGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDATKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE 298
            E GY TVE+V   T++KL ++KGIS+ KA+KI++ A KLVPMGF +A +  + R+D+I +STG K+LDA+LGGG+ETGSLTE++GEFRTGKTQLCHTLCV  QLP++QGGGEGKA+YIDTEGTFRP+RL  I++RFGLD   V+DNVA+ARA+NSE QM LL  A A+MSE R+ALV+VDSATALFRTDY GRGELS RQ  LAQFLR L ++++EFGVAVV+TNQVVANPD   FAKD  KPIGGNI+AHAS TRLRL+KGRG  RIC++ DSP LPE E  F I   G+  A E
Sbjct:   38 EGGYYTVESVAMTTMKKLIEVKGISEAKAIKIQQAATKLVPMGFTSATEYSKVREDIIHISTGCKELDAILGGGMETGSLTELYGEFRTGKTQLCHTLCVICQLPVEQGGGEGKALYIDTEGTFRPERLAQISQRFGLDPNDVMDNVAYARAYNSEHQMQLLMQAGALMSESRFALVIVDSATALFRTDYTGRGELSTRQQNLAQFLRGLQKLADEFGVAVVVTNQVVANPDTGVFAKDPLKPIGGNIMAHASTTRLRLKKGRGTTRICKVVDSPCLPEGEASFGISEQGVVEATE 333
[Close]
BLAST of NO09G01760 vs. NCBI_GenBank
Match: GAX92973.1 (DNA repair protein RAD51 [Pythium insidiosum])

HSP 1 Score: 406.0 bits (1042), Expect = 1.000e-109
Identity = 206/291 (70.79%), Postives = 243/291 (83.51%), Query Frame = 0 
Query:    2 EAGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDATKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGI 293
            EAG  TV+AV  AT ++L  IKGIS+ KA K+ + A ++V +GF TAA  L++RKDLI LSTGS  LD LL GG ETGS+TE+FGEFRTGKTQLCH LCVT QLP+D+GGGEGKA+YIDTEGTFRPQRLVAIAER+GLD ++VLDNVAFARA+NSE QM LL  ASAMM+E RYALV+VDSATAL+RTD+ GRGEL+ RQ +LA+FLR LTRM++EFGVAVV+TNQ+ ANPD   FAKD  +PIGGNI+AHASHTRLRL+KGRGENRI ++ DSP LPEAE  +SI   GI
Sbjct:   46 EAGMHTVDAVAMATKKQLISIKGISEVKAEKMLKAAREMVNVGFTTAADVLQSRKDLITLSTGSNALDELLKGGFETGSITELFGEFRTGKTQLCHQLCVTCQLPVDRGGGEGKALYIDTEGTFRPQRLVAIAERYGLDGDSVLDNVAFARAYNSEHQMQLLIQASAMMAESRYALVIVDSATALYRTDFSGRGELAARQQELAKFLRALTRMADEFGVAVVITNQMTANPDSGMFAKDPLQPIGGNIMAHASHTRLRLKKGRGENRIMKVVDSPILPEAEAVYSITEQGI 336
[Close]
BLAST of NO09G01760 vs. NCBI_GenBank
Match: XP_003206184.1 (PREDICTED: DNA repair protein RAD51 homolog 1 [Meleagris gallopavo] >XP_019470852.1 PREDICTED: DNA repair protein RAD51 homolog 1 [Meleagris gallopavo])

HSP 1 Score: 404.4 bits (1038), Expect = 3.000e-109
Identity = 206/297 (69.36%), Postives = 243/297 (81.82%), Query Frame = 0 
Query:    2 EAGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMS-FAKDATKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE 298
            EAGY TVE+V HA  ++L +IKGIS+ KA KI   A KLVPMGF TA +  + R ++IQ++TGSK+LD LL GGIETGS+TE+FGEFRTGKTQLCHTL VT QLP+D+GGGEGKAMYIDTEGTFRP+RL+A+AER+GL    VLDNVA+AR  N++ Q  LL  ASAMM+E RYAL++VDSATAL+RTDY GRGELS RQM LA+FLR L R+++EFGVAVV+TNQVVA  DG + FA D  KPIGGNIIAHAS TRL LRKGRGE RIC+IYDSP LPEAE  F+I A G+ +AKE
Sbjct:   43 EAGYHTVESVAHAPKKELLNIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKE 339
[Close]
BLAST of NO09G01760 vs. NCBI_GenBank
Match: XP_015718781.1 (PREDICTED: DNA repair protein RAD51 homolog 1 [Coturnix japonica] >XP_015718782.1 PREDICTED: DNA repair protein RAD51 homolog 1 [Coturnix japonica])

HSP 1 Score: 404.4 bits (1038), Expect = 3.000e-109
Identity = 206/297 (69.36%), Postives = 243/297 (81.82%), Query Frame = 0 
Query:    2 EAGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMS-FAKDATKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE 298
            EAGY TVE+V HA  ++L +IKGIS+ KA KI   A KLVPMGF TA +  + R ++IQ++TGSK+LD LL GGIETGS+TE+FGEFRTGKTQLCHTL VT QLP+D+GGGEGKAMYIDTEGTFRP+RL+A+AER+GL    VLDNVA+AR  N++ Q  LL  ASAMM+E RYAL++VDSATAL+RTDY GRGELS RQM LA+FLR L R+++EFGVAVV+TNQVVA  DG + FA D  KPIGGNIIAHAS TRL LRKGRGE RIC+IYDSP LPEAE  F+I A G+ +AKE
Sbjct:   43 EAGYHTVESVAHAPKKELLNIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKE 339
[Close]
BLAST of NO09G01760 vs. NCBI_GenBank
Match: NP_990504.1 (DNA repair protein RAD51 homolog 1 [Gallus gallus] >XP_015141632.1 PREDICTED: DNA repair protein RAD51 homolog 1 isoform X1 [Gallus gallus] >XP_015141633.1 PREDICTED: DNA repair protein RAD51 homolog 1 isoform X1 [Gallus gallus] >P37383.1 RecName: Full=DNA repair protein RAD51 homolog 1 >AAB26354.1 homolog to S.cerevisiae [Gallus gallus])

HSP 1 Score: 404.4 bits (1038), Expect = 3.000e-109
Identity = 206/297 (69.36%), Postives = 243/297 (81.82%), Query Frame = 0 
Query:    2 EAGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMS-FAKDATKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE 298
            EAGY TVE+V HA  ++L +IKGIS+ KA KI   A KLVPMGF TA +  + R ++IQ++TGSK+LD LL GGIETGS+TE+FGEFRTGKTQLCHTL VT QLP+D+GGGEGKAMYIDTEGTFRP+RL+A+AER+GL    VLDNVA+AR  N++ Q  LL  ASAMM+E RYAL++VDSATAL+RTDY GRGELS RQM LA+FLR L R+++EFGVAVV+TNQVVA  DG + FA D  KPIGGNIIAHAS TRL LRKGRGE RIC+IYDSP LPEAE  F+I A G+ +AKE
Sbjct:   43 EAGYHTVESVAHAPKKELLNIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKE 339
The following BLAST results are available for this feature:
BLAST of NO09G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27615.19.100e-15995.62dna repair protein rad51 [Nannochloropsis gaditana... [more]
CBJ27144.13.100e-13580.74DNA repair and recombination protein Rad51A [Ectoc... [more]
XP_002180445.12.300e-12273.56Rad51 DNA recombination/repair protein [Phaeodacty... [more]
GAX16358.15.700e-12172.54DNA repair protein RAD51 [Fistulifera solaris][more]
GAX28277.11.300e-12072.20DNA repair protein RAD51 [Fistulifera solaris][more]
XP_012896981.12.700e-11067.23uncharacterized protein [Blastocystis hominis] >XP... [more]
GAX92973.11.000e-10970.79DNA repair protein RAD51 [Pythium insidiosum][more]
XP_003206184.13.000e-10969.36PREDICTED: DNA repair protein RAD51 homolog 1 [Mel... [more]
XP_015718781.13.000e-10969.36PREDICTED: DNA repair protein RAD51 homolog 1 [Cot... [more]
NP_990504.13.000e-10969.36DNA repair protein RAD51 homolog 1 [Gallus gallus]... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL121nonsL121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR128ngnoR128Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010700NSK010700Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01760.1NO09G01760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G01760.2NO09G01760.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|22637gene_4375Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Rad51Agene2955Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01760.1NO09G01760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G01760.2NO09G01760.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01760 ID=NO09G01760|Name=NO09G01760|organism=Nannochloropsis oceanica|type=gene|length=2468bp
AAGTTATGAAAATGAATGAATCCAATCGCCAAGACCATCCCCTGCAACGA
CCATCGACGCAATCATAAGCACCTGCAAAGGGACTCCTGGGATAACATGA
GTGAAACGGCACGAGGCGTTGTTTAGGTTTGGATGCCTTGTGAGGCGCAA
TTGACGGAGACTCGCTTCTCGTCAGCCATACCCAGCATCACATTCGCTCC
CGCTATCATTCCCTTTCCCAGCATCACAAGCCGCAAGTCCACTCCCTCCT
CCTCATTGCGACCAGAAAGTTCCTGGTCCCTGGATCATCCATGCAGAGGG
AGTGGCAGCCTTTTGCCGGTACATACTTTTCAGCCCTCTTCAGTGACGTC
ATTTTAAGGCACATCGACATCCCTGCTCCCCGCTCCCTCACACGCACCCC
ACAGACACCCACACGCCCATAACTAGCATCAGCAACAGCACCAGCCCAGC
AACATTGATATACCATGGCGGCAGCAGCAGCAGAGATGCAGCACGTGGGG
CTAGAGCAGCAGCAGGTGGGCGAGCACGAGGTACGTGTGGTAATAAAGGT
GAAGCGAGGGTGAGAGGGGAAGAGGATCAATGGGCAGACGCCGCCGGCAG
TGAGAGTTGGTATTTCCCTCGTCCTCCCCCTTTTCTTCTCAATTTATGCT
TACTGGTTGAATCGTGCCTTAGTAGAGATGTCGCCGCCGCATCCCCCACC
TCACCCATCCCTCCCTCTCCTTCCCCTTGCCACCAGGTTATTGTCAACTT
CCGGCATATCTCCGAACTTGAGCACCATGGCATCAATCGTACCGACCTGA
ACAAGCTCATGGAGGCCGGATATTGCACCGTCGAGGCTGTCACACACGCC
ACCATCCGCAAACTAACTGACATCAAGgtaaggtagtagagtaggggaag
agaagggggagtcagtcctcttcacgctcattcgtccgtgcttcttctgc
tactcatgtcaggctaactttttttccacactgtcctcctccttcccatt
tctttttctctctttctcaccctacttctccttttccccagGGCATCTCC
GACCAGAAGGCCCTCAAAATCAAAGAAGTCGCCTACAAACTCGTTCCCAT
GGGATTCCTCACCGCTGCCCAACAGCTCGAAACCCGCAAGGACCTGATTC
AGCTCTCGACGGGGTCCAAAGATTTGGATGCTTTGCTGGGCGGAGGGATA
GAAACAGGCAGCCTCACGGAGATTTTCGGGGAATTCCGTACGGGCAAGAC
CCAACTCTGTCACACCCTCTGTGTGACGAGCCAGTTGCCGCTGGACCAGG
GAGGAGGAGAAGGGAAGGCCATGTATATTGACACGGAGGGGACCTTCCGT
CCCCAGCGGTTGGTGGCCATTGCCGAGCGTTTCGGCCTGGACGTGGAAAC
CGTGTTGGACAATGTAGCTTTTGCGCGGGCCCATAATTCGGAGCAGCAAA
TGGATTTATTGAAGATGGCGTCGGCCATGATGAGgtacgtccgatgccct
cctctcttccttcctccctcctttgtcccccttcctccgcttctgcgctt
tctgtcggggagccaacaaaaggcaggtgcagttcgctcactccctctct
ccctcctttcctccctccctccttccttcattccccacagTGAAGACCGG
TACGCCCTCGTGGTGGTCGACAGTGCCACTGCCCTATTCCGTACTGACTA
CTGCGGCCGCGGGGAGCTGAGCGAGCGCCAGATGCAGCTAGCTCAATTTC
TCCGTCAACTGACCCGGATGTCAGAGGAGTTCGGCGTGGCCGTCGTGCTG
ACCAACCAAGTGGTGGCGAACCCGGACGGGATGAGTTTTGCCAAGGATGC
GACCAAGCCGATTGGGGGCAATATCATCGCACACGCCAGCCACACGCGGC
TGCGGTTGAGGAAGGGGAGGGGGGAGAATCGCATATGCCAGATATATGAT
TCGCCGACCTTGCCGGAGGCGGAGACGCAGTTTTCGATTGGCGCCACGGG
GATTGATAATGCCAAGGAGTAAGAGAGGGAGAGAGAGAGGGTAGGATCGG
AAGAAACGGTGTATGCGGGGGGGGGATGAGGAGAGAAGTGAAGAATGAAG
GGAAGGTAGGAGAATGGAAAGGAGGTGGAGAAAAGAGGGGAAAGAAACCA
CAGAAATGCAGAAAGGCAACCGGCGTGAGAGAAAGCTAGCTAGTGACAGT
AAGTGTACAGTAGATAAGGATGTCAATGCTTGAGGGGGAGGGGGGCAAAG
CATGCACCAGGGACTCCGGTAGGGTGTGGAGTGTCACGCTGAGGAGCAGA
ATGGAACAGTAAGAGGAGGAGGCGGGAGGGAGGGATGGAGGGGTGAGGAA
GAATGAGGAGTGTGTGTGTTTGGGAGAGGGCGAGATAAAGTAAGATGCCT
AGAGAAAAGAATAAGGAACGATGTATGTCGGTTCGTTGGGTAGGGGATTG
GTTGCGTTGGGGGATGCG
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protein sequence of NO09G01760.1

>NO09G01760.1-protein ID=NO09G01760.1-protein|Name=NO09G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=344bp
MAAAAAEMQHVGLEQQQVGEHEVIVNFRHISELEHHGINRTDLNKLMEAG
YCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQQLET
RKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLCVTSQ
LPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAFARAH
NSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQL
AQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDATKPIGGNIIAHAS
HTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE*
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protein sequence of NO09G01760.2

>NO09G01760.2-protein ID=NO09G01760.2-protein|Name=NO09G01760.2|organism=Nannochloropsis oceanica|type=polypeptide|length=298bp
MEAGYCTVEAVTHATIRKLTDIKGISDQKALKIKEVAYKLVPMGFLTAAQ
QLETRKDLIQLSTGSKDLDALLGGGIETGSLTEIFGEFRTGKTQLCHTLC
VTSQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVETVLDNVAF
ARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSER
QMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDATKPIGGNII
AHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGATGIDNAKE*
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Synonyms
Publications