NO09G01730, NO09G01730 (gene) Nannochloropsis oceanica

Overview
NameNO09G01730
Unique NameNO09G01730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2461
Alignment locationchr9:539921..542381 +

Link to JBrowse

Properties
Property NameValue
DescriptionCationic amino acid transporter
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:539921..542381 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002293AA/rel_permease1
Homology
BLAST of NO09G01730 vs. NCBI_GenBank
Match: EWM27608.1 (cationic amino acid transporter [Nannochloropsis gaditana])

HSP 1 Score: 855.5 bits (2209), Expect = 9.300e-245
Identity = 439/574 (76.48%), Postives = 489/574 (85.19%), Query Frame = 0
Query:   11 SVSSDSDSASSGASLHAGNKPSLVPTRRTISSSNEG------------KGYFGRMFTTKSVDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTAAANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFLSACGYDMPSRWSRSPVGWDVQKGEFHITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIGVIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEFKGVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGTLFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTSTPQTIYRLFGWMAIGWIIYFVWGFQNSQKALERTSLNLPSRVIEPQGAEGGEVVGKKEGSMGEGGVAKVTADS 573
            S +  +DSA +G+S+   + PS       +S  + G            K + GR+  TK +D L EQ ANS++HRTLGA+DLTLLGVGEIVGTGIFVLTGTAAAN+AGPAVV+SFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSF+GWTIGWDLCLEYLVGAATV VGWSAYLRSFL++ GYDMP++WSRSPVGWDV +  F++TGDYVDLPAMAIAL+MT +LVFGIKESAR N+VIV IK+ VI+IFI AMGP VDR+NW PFVPPNEG FG+YG+SGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLA+CT LYILVALIATGLLPYYEFKG+AHPIS+AVEGIEGY+WL M+IN GAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAF  K+HP+YKTPWVTTIITGALC+LCAGILPIEVLSELTSVGTLFAFVLVC+GVSVLRYRRPNLERKF+VP GPWLIPGLGA+ SFLLICTS+  TIYRL  WMAIGWIIYFVWG +NSQK +ERT   LP+R    +  +G  +    EG   E GVA VT DS
Sbjct:   16 SATGSNDSADTGSSVSVRDNPSRKSAASLLSGGSTGGSCIDSLGGPKIKTFVGRLLKTKCMDALLEQVANSELHRTLGAFDLTLLGVGEIVGTGIFVLTGTAAANHAGPAVVLSFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFVGWTIGWDLCLEYLVGAATVSVGWSAYLRSFLASVGYDMPTKWSRSPVGWDVHREAFYVTGDYVDLPAMAIALVMTGLLVFGIKESARINAVIVAIKLSVIVIFICAMGPHVDRSNWEPFVPPNEGTFGRYGISGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAICTTLYILVALIATGLLPYYEFKGIAHPISYAVEGIEGYEWLEMVINIGAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAFAAKVHPRYKTPWVTTIITGALCALCAGILPIEVLSELTSVGTLFAFVLVCIGVSVLRYRRPNLERKFQVPFGPWLIPGLGASISFLLICTSSTHTIYRLMVWMAIGWIIYFVWGLENSQKVMERTI--LPNR----EHDDGNTL---NEGRGAETGVAMVTTDS 580          
BLAST of NO09G01730 vs. NCBI_GenBank
Match: XP_005856085.1 (cationic amino acid transporter, partial [Nannochloropsis gaditana CCMP526] >EKU20280.1 cationic amino acid transporter, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 854.7 bits (2207), Expect = 1.600e-244
Identity = 439/574 (76.48%), Postives = 489/574 (85.19%), Query Frame = 0
Query:   11 SVSSDSDSASSGASLHAGNKPSLVPTRRTISSSNEG------------KGYFGRMFTTKSVDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTAAANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFLSACGYDMPSRWSRSPVGWDVQKGEFHITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIGVIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEFKGVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGTLFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTSTPQTIYRLFGWMAIGWIIYFVWGFQNSQKALERTSLNLPSRVIEPQGAEGGEVVGKKEGSMGEGGVAKVTADS 573
            S +  +DSA +G+S+   + PS       +S  + G            K + GR+  TK +D L EQ ANS++HRTLGA+DLTLLGVGEIVGTGIFVLTGTAAAN+AGPAVV+SFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSF+GWTIGWDLCLEYLVGAATV VGWSAYLRSFL++ GYDMP++WSRSPVGWDV +  F++TGDYVDLPAMAIAL+MT +LVFGIKESAR N+VIV IK+ VI+IFI AMGP VDR+NW PFVPPNEG FG+YG+SGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLA+CT LYILVALIATGLLPYYEFKG+AHPIS+AVEGIEGY+WL M+IN GAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAF  K+HP+YKTPWVTTIITGALC+LCAGILPIEVLSELTSVGTLFAFVLVC+GVSVLRYRRPNLERKF+VP GPWLIPGLGA+ SFLLICTS+  TIYRL  WMAIGWIIYFVWG +NSQK +ERT   LP+R    +  +G  +    EG   E GVA VT DS
Sbjct:   42 SATGSNDSADTGSSVSVRDYPSRKSATSLLSGGSTGGSCIDSLGGPKIKTFVGRLLKTKCMDALLEQVANSELHRTLGAFDLTLLGVGEIVGTGIFVLTGTAAANHAGPAVVLSFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFVGWTIGWDLCLEYLVGAATVSVGWSAYLRSFLASVGYDMPTKWSRSPVGWDVHREAFYVTGDYVDLPAMAIALVMTGLLVFGIKESARINAVIVAIKLSVIVIFICAMGPHVDRSNWEPFVPPNEGTFGRYGISGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAICTTLYILVALIATGLLPYYEFKGIAHPISYAVEGIEGYEWLEMVINIGAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAFAAKVHPRYKTPWVTTIITGALCALCAGILPIEVLSELTSVGTLFAFVLVCIGVSVLRYRRPNLERKFQVPFGPWLIPGLGASISFLLICTSSTHTIYRLMVWMAIGWIIYFVWGLENSQKVMERTI--LPNR----EHDDGNTL---NEGRGAETGVAMVTTDS 606          
BLAST of NO09G01730 vs. NCBI_GenBank
Match: ORX87017.1 (cationic amino acid transporter-like protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 550.4 bits (1417), Expect = 6.400e-153
Identity = 276/482 (57.26%), Postives = 365/482 (75.73%), Query Frame = 0
Query:   47 KGYFGRMFTTKSVDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTAAANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFL-SACGYDMPSRWSRSPVGWDVQKGEFHITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIGVIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEFKGVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGTLFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTSTPQTIYRLFGWMAIGWIIYFVWGFQNSQ 528
            K ++ ++FT KS+D L      S + R+L   DLT +G+G I+GTGIFVLTG AAA NAGPAVV+SFV++GIA+  AA+ YSE+A ++PVAGSAYTY+YAT+G  +GW IGWDL LEYLVGAATV VGWS Y +SF  SA G +M ++W+ +P  +D +   FHI+G+ +++PA+ I+L +T +L FG++ESAR N+VIV++KI VI++F+ A    VD  N++PF PPNEG F Q+GVSG+F  A+ VFFSYIGFD++S  AQE K P+RDLPIG   SL +CTVLYI V  I TG++PY E   V  PIS  +    G  WL ++++FGA+ GLTSVILV L+ QPRIFYAMA DG  PA   KIHP++KTPWVTT+++G  C++  GILP++VL E+TSVGTLFAFVLV +GV +LR++RP+L RKFKVPLGP++IP +GAA + LLICT+T  TI RLF WM IG +IYF++G  +S+
Sbjct:   13 KSWWRKLFTVKSIDQLQADAEESILRRSLNFVDLTAIGIGAIIGTGIFVLTGIAAAKNAGPAVVLSFVVSGIAAGTAAVSYSEMACMLPVAGSAYTYTYATMGELVGWIIGWDLILEYLVGAATVSVGWSGYFKSFFKSAFGLNMSAKWTEAPFLFDTKTQSFHISGNILNIPAIVISLAITALLCFGVRESARLNTVIVIVKILVILLFVFACIKDVDPKNYTPFFPPNEGNFNQFGVSGMFSAATTVFFSYIGFDAISTAAQESKNPQRDLPIGICGSLLICTVLYIAVCFIMTGVVPYTEL-NVPAPISVVI-AHTGMSWLGVIVDFGALIGLTSVILVLLLGQPRIFYAMARDGLFPAVAAKIHPRFKTPWVTTLVSGTACAVLGGILPVDVLGEMTSVGTLFAFVLVNIGVIILRFKRPDLPRKFKVPLGPFVIPVIGAALAILLICTATVSTIIRLFVWMGIGLLIYFLYGRTHSK 492          
BLAST of NO09G01730 vs. NCBI_GenBank
Match: ORX77575.1 (amino acid/polyamine/organocation transporter, APC superfamily [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 540.0 bits (1390), Expect = 8.700e-150
Identity = 269/483 (55.69%), Postives = 363/483 (75.16%), Query Frame = 0
Query:   45 EGKGYFGRMFTTKSVDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTAAANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFL-SACGYDMPSRWSRSPVGWDVQKGEFHITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIGVIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEFKGVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGTLFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTSTPQTIYRLFGWMAIGWIIYFVWGFQNS 527
            +GK ++ ++FT K+VD L  +  +S+M R+L A+DLT +GVG I+GTGIFVLTGTAAA NAGPAVV+SF +AG+A+  AA+ YSE+A +IPV+GSAYTYSYAT+G  +GW IGWDL LEYLVGAATV VGWS Y   F  SA  + +  RW  SPV +D +   F +TG+Y++LPA  ++L++T +L FGI+ESAR N+V+V IK  VI++FI A    V+ +N++PFVP NEG F +YG +G+  GA+ VFFSYIGFD+VS  AQE K P+RDLPIG  SSL +CT+LY+ V ++ TG++P+ E    A PI+  + G  G +WL ++++ G + GLTSV+LV L++QPRIFY+MA+DG  P F  K+HPKYKTPW TT+I+G  C++  G+LP++VL E+TSVGTLFAF LV +GV++LR +RP+L RKFKVPLGP+L PGLGA  S  LI T++  T+ RLF WM +G +IYF +G  +S
Sbjct:   14 DGKSWWRKLFTLKNVDNLRSRAESSEMSRSLSAFDLTAIGVGAIIGTGIFVLTGTAAAQNAGPAVVLSFAVAGVAAGTAAMAYSEMACMIPVSGSAYTYSYATMGELVGWIIGWDLILEYLVGAATVSVGWSGYFVKFCESAFNWQLDKRWVDSPVIFDAKTNSFEVTGNYINLPASVVSLVVTGLLCFGIRESARANAVMVCIKTLVILLFIFACIKYVEPSNYTPFVPENEGSFSKYGATGVLAGATRVFFSYIGFDAVSTAAQEAKNPQRDLPIGICSSLILCTILYVAVCVVMTGVVPFRELNSSA-PINVVI-GYTGMRWLGIIVSLGILFGLTSVMLVLLIAQPRIFYSMALDGLFPKFAAKLHPKYKTPWSTTLISGLFCAVAGGVLPVDVLGEMTSVGTLFAFALVNIGVTILRVKRPDLPRKFKVPLGPYLFPGLGAIMSVGLIATASAHTLLRLFVWMGLGVLIYFCYGRTHS 494          
BLAST of NO09G01730 vs. NCBI_GenBank
Match: ORY01877.1 (amino acid transporter [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 532.3 bits (1370), Expect = 1.800e-147
Identity = 271/486 (55.76%), Postives = 359/486 (73.87%), Query Frame = 0
Query:   47 KGYFGRMFTTKSVDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTAAANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFL-SACGYDMPSRWSRSPVGWDVQKGEFHITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIGVIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEF----KGVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGTLFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTSTPQTIYRLFGWMAIGWIIYFVWGFQNSQ 528
            K ++ ++FT KS++ L  + ANS+M R+L   DLT +G+G I+GTGIFVLTG AAA+ AGPA+ ISF+++GIA+  AAL YSE+A +IPVAGSAYTY+YAT+G FIGW IGWDL LEYLVGAATV VGWSAY  +F+ SA GY M S+W  SPV +      F  TGDY+++PA+ I+L +T +L FGI+ESAR N+V+V IK+ V+++ I A    ++  N++PF PPNEG+F +YGVSG+F  A+ VFF+YIGFD++S  AQE K P+RDLPIG   SL +CT+LYI V  I TG++PY E     +  A PI+  +    G  WL ++++ G I GL SV+L+ LM QPRIFYAMA DG  P    +IHPKYKTPW TT ++G LC+L  GILP++VL ++TSVGTLFAF LV +GV +LR++RP++ RKFKVPLGP++IP LGAA S LL+CT++  TI RLF WM IG +IY  +G  +S+
Sbjct:   14 KSWWQKLFTVKSMEQLQSEVANSEMKRSLNYVDLTSVGIGAIIGTGIFVLTGIAAADKAGPAIAISFIVSGIAAGTAALSYSEMACMIPVAGSAYTYTYATMGEFIGWIIGWDLILEYLVGAATVSVGWSAYFTAFIESAFGYKMSSKWVNSPVSY--VDDAFVTTGDYINIPAIVISLAITGLLCFGIRESARVNTVMVGIKVVVVLLTIFACIKNINPDNYTPFFPPNEGKFEKYGVSGMFSAATTVFFAYIGFDAISTAAQEAKNPQRDLPIGICGSLIICTILYIAVCFIMTGVVPYRELHPPGQNAAKPIAILI-AATGMNWLNIIVSLGIIFGLASVMLILLMGQPRIFYAMAKDGLFPEIAARIHPKYKTPWFTTTLSGVLCALLGGILPVDVLGDMTSVGTLFAFFLVNIGVIILRFKRPDIPRKFKVPLGPFVIPVLGAALSILLLCTASTSTIARLFVWMGIGIVIYIFYGRTHSK 496          
BLAST of NO09G01730 vs. NCBI_GenBank
Match: ORX76306.1 (amino acid permease [Basidiobolus meristosporus CBS 931.73] >ORY01878.1 amino acid permease [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 530.8 bits (1366), Expect = 5.300e-147
Identity = 272/482 (56.43%), Postives = 356/482 (73.86%), Query Frame = 0
Query:   47 KGYFGRMFTTKSVDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTAAANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFL-SACGYDMPSRWSRSPVGWDVQKGEFHITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIGVIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEFKGVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGTLFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTSTPQTIYRLFGWMAIGWIIYFVWGFQNSQ 528
            + ++ ++F  KS+D L      S + R+L   DLT +G+G I+GTGIFVLTG AAA NAGPAVV+SFV++GIA+  AAL YSE+A +IPVAGSAYTY+YAT+G  +GW    DL LEYLVGAATV VGWS Y +SF  SA G +M  RW+ +P  +D +   F ++G+ +++PA+ I+L +T +L FG++ESAR N+VIV++KI VI++FI A    V+  N++PF PPNEG F Q+GVSG+F  A+ VFFSYIGFD++S  AQE K P+RDLPIG   SL +CTVLYI V  I TG++PY E   V  PIS  +    G  WL +++ FGA+ GLTSVILV LM QPRIFYAMA DG  PA   K+HP++KTPWVTT+I+G  C++  GILP++VL E+TSVGTLFAFVLV +GV +LR++RP++ RKFKVPLGP++IP +GAA S LLICT+T  TI RLF WM IG +IY  +G  +S+
Sbjct:   13 RSWWRKLFAVKSLDRLQADAEESVLRRSLNFMDLTAIGIGAIIGTGIFVLTGIAAAKNAGPAVVLSFVVSGIAAGTAALSYSEMACMIPVAGSAYTYAYATMGELVGWXXXXDLILEYLVGAATVSVGWSGYFKSFFKSAFGLNMSERWTEAPFTFDTKTQSFSMSGNILNIPAIVISLAITALLCFGVRESARLNTVIVIVKIIVILLFIFACIKNVNPDNYTPFFPPNEGSFNQFGVSGMFAAATTVFFSYIGFDAISTAAQESKNPQRDLPIGICGSLIICTVLYIAVCFIMTGVVPYKEL-NVPAPISVVI-ARTGMSWLGVIVEFGALIGLTSVILVLLMGQPRIFYAMACDGLFPAVATKVHPRFKTPWVTTMISGIACAVLGGILPVDVLGEMTSVGTLFAFVLVNIGVIILRFKRPDVPRKFKVPLGPFVIPVIGAALSVLLICTATVSTIARLFIWMGIGLLIYIFYGRTHSK 492          
BLAST of NO09G01730 vs. NCBI_GenBank
Match: EXX77727.1 (Hip1p [Rhizophagus irregularis DAOM 197198w] >GBC34266.1 amino acid permease [Rhizophagus irregularis DAOM 181602] >PKC13782.1 amino acid transporter [Rhizophagus irregularis] >POG66186.1 hypothetical protein GLOIN_2v1659029 [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 523.1 bits (1346), Expect = 1.100e-144
Identity = 291/561 (51.87%), Postives = 384/561 (68.45%), Query Frame = 0
Query:   16 SDSASSGASLHAGNKPSLVPTRRTISSSNEGKGYFGRMFTTKSVDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTAAANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFLS-ACGYDMPSRWSRSPVGWDVQKGEFH-ITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIGVIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEFKGVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMAVDG-FVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGTLFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTSTPQTIYRLFGWMAIGWIIYFVWGFQNSQKALERTSLNLPSRVIEPQGAEGGEVVG-----KKEGSMGEGGVAKV 569
            S SA SG + +    P            ++ K +  ++FTTKS+  L E    S + R+L   D  +LG+G ++G+GIFVLTG AAA  +GPA+VISF+I+GIAS FAAL YSEL+++IPVAGSAYTYSYAT+G  +GW IGWDL LEYLV AA V VGWSAY   F +   G ++ S W+ +P  +D   G F  + G Y +LPA  I LL+T IL+ G+KESA  N+VIV IKI VI+IF+IA G +++  N+ PFVPPNEG F  +GV+GIF GAS VFF+YIGFD+VS  AQE K P+RDLPIG + SL +CT+LYI V ++ TG++PY +    A PI+ AV+ I   KWL +++N GAIAGLTSV+LVSLM QPRIFY+MA DG F+P    K+HPK+KTP+VTT ITG +C++ + +LPI+VL+ LTSVGTL AF LV + V +LR   P+  RKFKVP GP+++P LGAA S LL+ T+T  +I RLF WMAIG +IYF +G  +S+        N   R+ E +G +  E+V      KKEG + E  V ++
Sbjct:    2 SSSALSGYAFYTSGSPRQ-------DGESKWKYFIRKLFTTKSLSSLEEDQEASKLKRSLNWLDFIMLGIGNVIGSGIFVLTGQAAATKSGPAIVISFIISGIASSFAALSYSELSTMIPVAGSAYTYSYATMGELMGWIIGWDLILEYLVAAAAVAVGWSAYFVHFFNDTFGIELSSSWTNAPFTFDETTGSFSTVPGAYFNLPAFLIILLLTVILIIGVKESATVNTVIVGIKIFVIVIFVIAAGTKINPENYKPFVPPNEGTFSAFGVTGIFAGASEVFFAYIGFDAVSTTAQEAKNPQRDLPIGIIGSLGICTILYIAVCVVLTGIVPYRQLNSAA-PIAVAVQSI-NMKWLEIIVNLGAIAGLTSVMLVSLMGQPRIFYSMAQDGLFLPKTASKVHPKFKTPYVTTAITGVICAVASAVLPIDVLANLTSVGTLLAFFLVNISVMILRLTAPDAPRKFKVPGGPFIVPILGAALSLLLLATATVSSIERLFVWMAIGLVIYFSYGRTHSK-------ANNMKRLEEKEGIK--EIVELEKSVKKEGEIDEVEVTEI 544          
BLAST of NO09G01730 vs. NCBI_GenBank
Match: PKC65965.1 (amino acid transporter [Rhizophagus irregularis])

HSP 1 Score: 523.1 bits (1346), Expect = 1.100e-144
Identity = 291/561 (51.87%), Postives = 384/561 (68.45%), Query Frame = 0
Query:   16 SDSASSGASLHAGNKPSLVPTRRTISSSNEGKGYFGRMFTTKSVDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTAAANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFLS-ACGYDMPSRWSRSPVGWDVQKGEFH-ITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIGVIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEFKGVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMAVDG-FVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGTLFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTSTPQTIYRLFGWMAIGWIIYFVWGFQNSQKALERTSLNLPSRVIEPQGAEGGEVVG-----KKEGSMGEGGVAKV 569
            S SA SG + +    P            ++ K +  ++FTTKS+  L E    S + R+L   D  +LG+G ++G+GIFVLTG AAA  +GPA+VISF+I+GIAS FAAL YSEL+++IPVAGSAYTYSYAT+G  +GW IGWDL LEYLV AA V VGWSAY   F +   G ++ S W+ +P  +D   G F  + G Y +LPA  I LL+T IL+ G+KESA  N+VIV IKI VI+IF+IA G +++  N+ PFVPPNEG F  +GV+GIF GAS VFF+YIGFD+VS  AQE K P+RDLPIG + SL +CT+LYI V ++ TG++PY +    A PI+ AV+ I   KWL +++N GAIAGLTSV+LVSLM QPRIFY+MA DG F+P    K+HPK+KTP+VTT ITG +C++ + +LPI+VL+ LTSVGTL AF LV + V +LR   P+  RKFKVP GP+++P LGAA S LL+ T+T  +I RLF WMAIG +IYF +G  +S+        N   R+ E +G +  E+V      KKEG + E  V ++
Sbjct:    2 SSSALSGYAFYTSGSPRQ-------EGESKWKYFIRKLFTTKSLSSLEEDQEASKLKRSLNWLDFIMLGIGNVIGSGIFVLTGQAAATKSGPAIVISFIISGIASSFAALSYSELSTMIPVAGSAYTYSYATMGELMGWIIGWDLILEYLVAAAAVAVGWSAYFVHFFNDTFGIELSSSWTNAPFTFDETTGSFSTVPGAYFNLPAFLIILLLTVILIIGVKESATVNTVIVGIKIFVIVIFVIAAGTKINPENYKPFVPPNEGTFSAFGVTGIFAGASEVFFAYIGFDAVSTTAQEAKNPQRDLPIGIIGSLGICTILYIAVCVVLTGIVPYRQLNSAA-PIAVAVQSI-NMKWLEIIVNLGAIAGLTSVMLVSLMGQPRIFYSMAQDGLFLPKTASKVHPKFKTPYVTTAITGVICAVASAVLPIDVLANLTSVGTLLAFFLVNISVMILRLTAPDAPRKFKVPGGPFIVPILGAALSLLLLATATVSSIERLFVWMAIGLVIYFSYGRTHSK-------ANNMKRLEEKEGIK--EIVELEKSVKKEGEIDEVEVTEI 544          
BLAST of NO09G01730 vs. NCBI_GenBank
Match: PKK68293.1 (amino acid transporter [Rhizophagus irregularis])

HSP 1 Score: 521.5 bits (1342), Expect = 3.200e-144
Identity = 290/561 (51.69%), Postives = 384/561 (68.45%), Query Frame = 0
Query:   16 SDSASSGASLHAGNKPSLVPTRRTISSSNEGKGYFGRMFTTKSVDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTAAANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFLS-ACGYDMPSRWSRSPVGWDVQKGEFH-ITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIGVIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEFKGVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMAVDG-FVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGTLFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTSTPQTIYRLFGWMAIGWIIYFVWGFQNSQKALERTSLNLPSRVIEPQGAEGGEVVG-----KKEGSMGEGGVAKV 569
            S SA SG + +    P            ++ K +  ++FTTKS+  L E    S + R+L   D  +LG+G ++G+GIFVLTG AAA  +GPA+VISF+I+GIAS FAAL YSEL+++IPV+GSAYTYSYAT+G  +GW IGWDL LEYLV AA V VGWSAY   F +   G ++ S W+ +P  +D   G F  + G Y +LPA  I LL+T IL+ G+KESA  N+VIV IKI VI+IF+IA G +++  N+ PFVPPNEG F  +GV+GIF GAS VFF+YIGFD+VS  AQE K P+RDLPIG + SL +CT+LYI V ++ TG++PY +    A PI+ AV+ I   KWL +++N GAIAGLTSV+LVSLM QPRIFY+MA DG F+P    K+HPK+KTP+VTT ITG +C++ + +LPI+VL+ LTSVGTL AF LV + V +LR   P+  RKFKVP GP+++P LGAA S LL+ T+T  +I RLF WMAIG +IYF +G  +S+        N   R+ E +G +  E+V      KKEG + E  V ++
Sbjct:    2 SSSALSGYAFYTSGSPRQ-------EGESKWKYFIRKLFTTKSLSSLEEDQEASKLKRSLNWLDFIMLGIGNVIGSGIFVLTGQAAATKSGPAIVISFIISGIASSFAALSYSELSTMIPVSGSAYTYSYATMGELMGWIIGWDLILEYLVAAAAVAVGWSAYFVHFFNDTFGIELSSSWTNAPFTFDETTGSFSTVPGAYFNLPAFLIILLLTIILIIGVKESATVNTVIVGIKIFVIVIFVIAAGTKINPENYKPFVPPNEGTFSAFGVTGIFAGASEVFFAYIGFDAVSTTAQEAKNPQRDLPIGIIGSLGICTILYIAVCVVLTGIVPYRQLNSAA-PIAVAVQSI-NMKWLEIIVNLGAIAGLTSVMLVSLMGQPRIFYSMAQDGLFLPKTASKVHPKFKTPYVTTAITGVICAVASAVLPIDVLANLTSVGTLLAFFLVNISVMILRLTAPDAPRKFKVPGGPFIVPILGAALSLLLLATATVSSIERLFVWMAIGLVIYFSYGRTHSK-------ANNMKRLEEKEGIK--EIVELEKSVKKEGEIDEVEVTEI 544          
BLAST of NO09G01730 vs. NCBI_GenBank
Match: ORX76305.1 (amino acid transporter [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 521.2 bits (1341), Expect = 4.200e-144
Identity = 266/474 (56.12%), Postives = 350/474 (73.84%), Query Frame = 0
Query:   59 VDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTAAANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGSFIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFL-SACGYDMPSRWSRSPVGWDVQKGEFHITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIGVIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIGFDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEF----KGVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMAVDGFVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGTLFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTSTPQTIYRLFGWMAIGWIIYFVWGFQNSQ 528
            ++ L  + ANS+M R+L   DLT +G+G I+GTGIFVLTG AAA+ AGPA+ ISF+++GIA+  AAL YSE+A +IPVAGSAYTY+YAT+G FIGW IGWDL LEYLVGAATV VGWSAY  +F+ SA GY M S+W  SPV +      F  TGDY+++PA+ I+L +T +L FGI+ESAR N+V+V IK+ V+++ I A    ++  N++PF PPNEG+F +YGVSG+F  A+ VFF+YIGFD++S  AQE K P+RDLPIG   SL +CT+LYI V  I TG++PY E     +  A PI+  +    G  WL ++++ G I GL SV+L+ LM QPRIFYAMA DG  P    +IHPKYKTPW TT ++G LC+L  GILP++VL ++TSVGTLFAF LV +GV +LR++RP++ RKFKVPLGP++IP LGAA S LL+CT++  TI RLF WM IG +IY  +G  +S+
Sbjct:    1 MEQLQSEVANSEMKRSLNYVDLTSVGIGAIIGTGIFVLTGIAAADKAGPAIAISFIVSGIAAGTAALSYSEMACMIPVAGSAYTYTYATMGEFIGWIIGWDLILEYLVGAATVSVGWSAYFTAFIESAFGYKMSSKWVNSPVSY--VDDAFVTTGDYINIPAIVISLAITGLLCFGIRESARVNTVMVGIKVVVVLLTIFACIKNINPDNYTPFFPPNEGKFEKYGVSGMFSAATTVFFAYIGFDAISTAAQEAKNPQRDLPIGICGSLIICTILYIAVCFIMTGVVPYRELHPPGQNAAKPIAILI-AATGMNWLNIIVSLGIIFGLASVMLILLMGQPRIFYAMAKDGLFPEIAARIHPKYKTPWFTTTLSGVLCALLGGILPVDVLGDMTSVGTLFAFFLVNIGVIILRFKRPDIPRKFKVPLGPFVIPVLGAALSILLLCTASTSTIARLFVWMGIGIVIYIFYGRTHSK 471          
The following BLAST results are available for this feature:
BLAST of NO09G01730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27608.19.300e-24576.48cationic amino acid transporter [Nannochloropsis g... [more]
XP_005856085.11.600e-24476.48cationic amino acid transporter, partial [Nannochl... [more]
ORX87017.16.400e-15357.26cationic amino acid transporter-like protein [Basi... [more]
ORX77575.18.700e-15055.69amino acid/polyamine/organocation transporter, APC... [more]
ORY01877.11.800e-14755.76amino acid transporter [Basidiobolus meristosporus... [more]
ORX76306.15.300e-14756.43amino acid permease [Basidiobolus meristosporus CB... [more]
EXX77727.11.100e-14451.87Hip1p [Rhizophagus irregularis DAOM 197198w] >GBC3... [more]
PKC65965.11.100e-14451.87amino acid transporter [Rhizophagus irregularis][more]
PKK68293.13.200e-14451.69amino acid transporter [Rhizophagus irregularis][more]
ORX76305.14.200e-14456.12amino acid transporter [Basidiobolus meristosporus... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL121nonsL121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR128ngnoR128Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010704NSK010704Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01730.1NO09G01730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588915gene_4378Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100069g20gene2958Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01730.1NO09G01730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01730 ID=NO09G01730|Name=NO09G01730|organism=Nannochloropsis oceanica|type=gene|length=2461bp
CGGCTATCGCAGAGACTGTCTACCCGGATTATTAGATGCCTGAAATATTG
TGGAAGACTCGTCGGTCAGGCAGAGCACACCGTTTACGCAATTACAATAA
ACAACCCGCAAAAAGACAGGTGAAGTAGGAGCGGGCCCCGCAGCACTTTC
CAGGGCGCTCAAGCGTAAAGGCCAGCCACCAACACTCCTGCTGTCTGGCC
GGACGTTTCTTCTTTGCGCTAGTTCCTCGCGGGTCGCCCTCCGTGGAGCT
GGCCCCTCGTTCTTATGTGCGCGCCCGCAAGGGCCACTATCATCCATGCA
TAGTCAGGCTGTTGCTCACTGAAGCCTAGGCTGCATTTTCCCCATACTCC
AGAGGTTAAATTGACCGAACTCCCTTCGACCCTTCCTCCCCATCACCACA
CAGGCGCAGCAAGACATCTACGACGCGCCTTTCCCCTCTGCCTTGCTGGC
AGTCCACCACCCCCTCCCTTGGACAACACTACCAGCATCCATGGTGCCCT
CACCGCGCAAAATGGCATCCTCCGTTTCCAGTGATAGCGATAGTGCCAGC
AGCGGCGCAAGTCTCCATGCGGGGAACAAGCCAAGCCTTGTACCCACCCG
GCGAACAATCAGCAGCAGCAACGAGGGCAAGGGTTACTTCGGACGGATGT
TTACAACGAAAAGCGTGGATTTGTTGGCGGAGCAAGGGGCGAATTCCGAC
ATGCATCGCACGTTGGGCGCGTGGGACCTGACCCTGCTAGGGGTAGGTGA
GATTGTAGGAACGGGTATCTTCGTCTTGACTGGCACGGCGGCTGCGAATA
ACGCGGGGCCTGCCGTGGTGATTTCGTTTGTGATAGCGGGGATTGCGTCA
ATGTTTGCGGCGCTGTGCTATAGTGAGCTGGCATCGATTATTCCAGTTGC
GGGGTCGGCCTATACATACTCGTATGCAACGCTTGGGTCCTTTATTGGCT
GGACGATTGGGTGGGATTTGTGCTTGGAGTATCTGGTGGGGGCGGCGACT
GTATGTGTGGGATGGAGTGCGTATTTAAGGAGTTTCCTGTCGGCGTGTGG
ATATGATATGCCTTCGAGGTGGAGTCGAAGTCCTGTGGGCTGGGATGTGC
AGAAGGGGGAGTTCCACATTACGGGGGATTATGTAGATTTGCCCGCTATG
GCGATTGCATTGTTGATGACCACGATTTTGGTTTTTGGGATCAAGGAGAG
CGCGCGCTTTAACTCGGTGATCGTGATGATTAAGATTGGTGTGATCATTA
TTTTTATCATTGCCATGGGGCCCAGGGTGGATAGGGCGAATTGGTCGCCA
TTCGTGCCGCCGAATGAGGGGAGGTTCGGGCAGTATGGTGTGAGCGGGAT
TTTCCAGGGAGCGAGTGTGGTGTTCTTTAGTTACATCGGCTTCGATTCTG
TGAGCTGTTGTGCTCAAGAGTGCAAGAAGCCAGAGAGGGATTTGCCGATT
GGGACACTGAGTTCCTTGGCCGTGTGCACCGTGTTGTACATCTTGGTTGC
GTTGATTGCGACGGGCTTGCTGCCGTACTATGAATTCAAGGGAGTGGCGC
ACCCGATTTCGTTCGCCGTGGAGGGCATTGAAGGGTACAAGTGGTTGGTG
ATGTTAATTAATTTCGGGGCGATTGCTGGGTTGACCAGTGTGATTTTGGT
GAGTCTGATGAGCCAGCCGCGGATTTTCTATGCCATGGCTGTGGATGGAT
TTGTGCCGGCGTTTTGTGGAAAGATCCATCCCAAGTATAAGACGCCGTGG
GTCACGACGATTATCACGGGGGCGTTGTGTTCTCTGTGTGCGGGAATCTT
GCCAATTGAGGTCTTGAGTGAGTTGACGTCGGTGGGGACGCTGTTTGCTT
TTGTCCTGGTGTGTGTGGGTGTCTCCGTGTTGCGGTATCGCAGGCCGAAT
CTGGAGAGGAAATTCAAAGTTCCTTTGGGCCCGTGGCTCATTCCAGGGTT
GGGGGCGGCGTCCAGCTTCTTGTTGATTTGCACATCAACCCCGCAGACGA
TTTATCGGTTGTTTGGGTGGATGGCCATTGGCTGGATAATTTACTTTGTG
TGGGGGTTTCAGAATTCCCAAAAGGCGCTTGAAAGGACGAGTCTCAATTT
GCCGAGTCGAGTGATTGAGCCACAAGGCGCGGAGGGCGGGGAGGTGGTGG
GGAAGAAGGAAGGATCGATGGGGGAGGGAGGGGTGGCGAAAGTGACGGCG
GATTCGTAGAGGAAAGAACCCAGGGGAAAGACTTAAGGGGCGGGGATCAT
AAGTAGGCTGGAAAAGGAGTAAGCGAACATAAATGATGTCTGATATAGAT
TTGAAGCACCAAAAACAAAAAGCAAAATGGTTGCCTCCTATAGAATGTAC
AGTCCTCTGGGGGTAAAGAACCTGTCAGAGGGAAGAAAAAGACGCATGCG
AACAGATAAAAATACCCAAAAAGGGATCGCAAAGAAGAAATGAGCCTGAA
CTTACTAAGTA
back to top

protein sequence of NO09G01730.1

>NO09G01730.1-protein ID=NO09G01730.1-protein|Name=NO09G01730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=573bp
MVPSPRKMASSVSSDSDSASSGASLHAGNKPSLVPTRRTISSSNEGKGYF
GRMFTTKSVDLLAEQGANSDMHRTLGAWDLTLLGVGEIVGTGIFVLTGTA
AANNAGPAVVISFVIAGIASMFAALCYSELASIIPVAGSAYTYSYATLGS
FIGWTIGWDLCLEYLVGAATVCVGWSAYLRSFLSACGYDMPSRWSRSPVG
WDVQKGEFHITGDYVDLPAMAIALLMTTILVFGIKESARFNSVIVMIKIG
VIIIFIIAMGPRVDRANWSPFVPPNEGRFGQYGVSGIFQGASVVFFSYIG
FDSVSCCAQECKKPERDLPIGTLSSLAVCTVLYILVALIATGLLPYYEFK
GVAHPISFAVEGIEGYKWLVMLINFGAIAGLTSVILVSLMSQPRIFYAMA
VDGFVPAFCGKIHPKYKTPWVTTIITGALCSLCAGILPIEVLSELTSVGT
LFAFVLVCVGVSVLRYRRPNLERKFKVPLGPWLIPGLGAASSFLLICTST
PQTIYRLFGWMAIGWIIYFVWGFQNSQKALERTSLNLPSRVIEPQGAEGG
EVVGKKEGSMGEGGVAKVTADS*
back to top
Synonyms
Publications