NO09G01710, NO09G01710 (gene) Nannochloropsis oceanica

Overview
NameNO09G01710
Unique NameNO09G01710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3681
Alignment locationchr9:533838..537518 -

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Properties
Property NameValue
DescriptionAtp-dependent rna helicase ddx24
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:533838..537518 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0004386helicase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of NO09G01710 vs. NCBI_GenBank
Match: EWM27530.1 (atp-dependent rna helicase ddx24, partial [Nannochloropsis gaditana])

HSP 1 Score: 447.2 bits (1149), Expect = 1.400e-121
Identity = 251/414 (60.63%), Postives = 287/414 (69.32%), Query Frame = 0
Query:  610 IRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKXXXXXXXXXXXXXXVMGRIMREVGMRGVPAIIDLTSGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLALPTGLQLCHVKTVGGHKDAHLYHFLRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDYFRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARANRNGLSFSLVAPRDEKMHAEVCRALLSGQTAXXXXXXXXXXXXXXXXXXPLSMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREADLELDADLLEETEAGTEKERQRARQMELDRQRLDELLSAPLVQQRRKFINVAEKLQVLKQAEGCKDAIQVAAKT 1024
            +R LPPPVTRQTLIFSATL+MPEE R   G KK                 V+ RIMR+VGMRG PA++DLTSG+ +                                      ++ALP GL+LCHVK+VG HKDA+LY+FLRR+PGRTI+FTNSIDQTRRLAQLL+LLRLPA+ALHAKMQQRARLKSLD FR+ + AVLVATDVAARGLDIPLVEHVIHYD+PRSLEVFVHRAGRTARANR GLSFS+VAPRDEK H EVCRAL +   +                  P     FPVDL+ELN  RERVHLAGKIVGHEQE GRQQA+QSWFLKRAREADL+LD +LL E E GTE             +RL+ELLS P+VQQRRKFINVA+ LQ L Q E CKDAI+  +++
Sbjct:  113 LRPLPPPVTRQTLIFSATLIMPEETRGKMGGKKA-----RGPKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGE-SRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLP-----FPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNEKEHGTEXXXXXXXXXXXXXKRLNELLSQPMVQQRRKFINVADSLQALAQTEECKDAIKAVSQS 515          
BLAST of NO09G01710 vs. NCBI_GenBank
Match: GAY01422.1 (Hypothetical protein PINS_009266 [Pythium insidiosum])

HSP 1 Score: 326.6 bits (836), Expect = 2.800e-85
Identity = 313/777 (40.28%), Postives = 416/777 (53.54%), Query Frame = 0
Query:  219 HWSPAALSGVSLHPLLLRNLHRQGFYSPTPIQRRALPLAMPXXXXXXXXXXDLMGAAETGSGKTLAYGLPILDYLLKRREEKKDGEEDKDAGEGETSNKYGALAALILCPTRELALQVTEHLQEMLVGDVAPGRARINVMGIVGGLSDTKQARLLRRMPEVVVATVGRCWEMIKNGQEGHLRDMG-RLRFLVLDEADRMVEEGHFPEMQALLTRVVEQGKTYQRDYDAVRRMKREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCEVPTKSLKDILKEAKRMGLXXXXXXXXXXXXXXXXXXXXXXXXXXXILIEGSVDGLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPMASIRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKXXXXXXXXXXXXXXVMGRIMREVGMRGVPAIIDLTSGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLALPTGLQLCHVKTVGGHKDAHLYHFLRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDYFRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARANRNGLSFSLVAPRDEKMHAEVCRALLSGQTAXXXXXXXXXXXXXXXXXXPLSMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREADLELDADLLEETEAGTEKERQRAR----QMELDRQRLDELLSAPL 991
            +W+P       LHPLLLR+L R GF++PTPIQ + L  A+           D++GAA TGSGKTLA+GLPIL  LL  R+             G  + K   + AL+L PTRELALQ+ +HL+ ++       +  + VM +VGG+S  KQ RLL   PEVV+ T GR W++I +  E HLRD+   LRFLV+DEADRM++ G +PE++ +              ++ +RR K++                                               +   L+ A+                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   +FSATL +PE  R  KG +K                 V+  +M+ VG+RG PA++DL    A  XXXXXXXXXXXXXXXXX                    +L+LP GL+LC  +     +D++LY+FL +YPG+TI+F N+I Q R+LA LL+LL+LP  ALHA++QQR RLK LD FR+H   +L+ATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARA+++GLS SLVAP D K H ++C+ L                        P  ++ FP D R L    ER+ LA  I   E  AG+ ++ ++WF + A+ ADL+L  DLL E E+     R++ +     +E  R++L  L++APL
Sbjct:  181 NWAP-----FGLHPLLLRSLARCGFHTPTPIQAKTLAPAL-------VDTRDVVGAAPTGSGKTLAFGLPILSQLLAERD-----------ALGAQATKTAGVKALVLTPTRELALQILQHLERLV------PKREVGVMALVGGMSVQKQTRLLSYRPEVVIGTPGRLWDLIDSNHE-HLRDLHVTLRFLVIDEADRMLQTGSYPEVEKI--------------FEVIRRSKKD----------------------------------------------PVLQALESAE--------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFSATLTIPEGGRFQKGPRK-----------HRHALTVLESVMKRVGLRGKPAVVDLGVSDAAGXXXXXXXXXXXXXXXXXNV------------------ALSLPAGLELCQHEVTDDSRDSYLYYFLTQYPGKTIVFLNAIHQVRKLAGLLSLLQLPVFALHAELQQRQRLKRLDGFRAHPHGILIATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARADKDGLSISLVAPADMKFHLQICKLL----------------------QRPTGLSDFPFDHRYLPAIDERLRLAKAINDEENSAGKVKSEETWFSQMAKAADLDLXDDLLAELESKKHTSRKQKQATGDSLEGMRRQLQRLVAAPL 784          
BLAST of NO09G01710 vs. NCBI_GenBank
Match: XP_009521679.1 (hypothetical protein PHYSODRAFT_480097 [Phytophthora sojae] >EGZ26391.1 hypothetical protein PHYSODRAFT_480097 [Phytophthora sojae])

HSP 1 Score: 325.5 bits (833), Expect = 6.100e-85
Identity = 306/797 (38.39%), Postives = 407/797 (51.07%), Query Frame = 0
Query:  209 PLVDIKAQLSHWSPAALSGVSLHPLLLRNLHRQGFYSPTPIQRRALPLAMPXXXXXXXXXXDLMGAAETGSGKTLAYGLPILDYLLKRREEKKDGEEDKDAGEGETSNKYGALAALILCPTRELALQVTEHLQEMLVGDVAPGRARINVMGIVGGLSDTKQARLLRRMPEVVVATVGRCWEMIKNGQEGHLRDMG-RLRFLVLDEADRMVEEGHFPEMQALLTRVVEQGKTYQRDYDAVRRMKREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCEVPTKSLKDILKEAKRMGLXXXXXXXXXXXXXXXXXXXXXXXXXXXILIEGSVDGLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPMASIRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKXXXXXXXXXXXXXXVMGRIMREVGMRGVPAIIDLTSGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLALPTGLQLCHVKTVGGHKDAHLYHFLRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDYFRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARANRNGLSFSLVAPRDEKMHAEVCRALLSGQTAXXXXXXXXXXXXXXXXXXPLSMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREADLELDADLLEETEA-----GTEKERQRARQMELDRQRLDELLSAPL--VQQRRKF 998
            PL D+K  L  W+        LHPLL+++L   GF +PT IQ R L  A+           D++GAA TGSGKTLA+GLPIL  LL  RE+    ++ K               ALIL PTRELA+Q+ +HL++M+          I V+ +VGG++  KQ R+L   PE+V+ T GR W++I+   E H++D+   LRFLV+DEADRM++ G +PE++ +              +D +RR  +            XXXXXXXXXXXXXXXXXXXXXXXXXXXX+ +  + S   +L            XXXXXXXXXXXXXXXXXXXXXXX      V+ +                                                                PP  TRQT +FSATL++PE  R  KG  K                 V+ R+M+ VG+RG PA++DL+                                           +L+LP GL+LC  +     +D+ LY+FL +YPGRTIIF N+I Q RRL  LL+LL LP  ALHA+MQQR RLK LD FR+H   +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARA+++GLS SLV+P D K H ++C+ L                        P  ++ FP D R +    ERV LA  I   E  AG+ ++  +WF + A  ADL++D DLL E  A      ++K+    + ++  R +L+ LLS PL  V   RKF
Sbjct:  125 PLKDVK--LPKWNK-----FKLHPLLMQSLQTCGFSAPTRIQERTLLPAL-------VDNRDVVGAAPTGSGKTLAFGLPILSQLLHEREQPGYTKDCK---------------ALILTPTRELAIQIQQHLEKMV------RNREIGVVTLVGGMAVQKQKRILSYRPEIVIGTPGRLWDIIEANHE-HMKDLATTLRFLVVDEADRMLQPGSYPELEKI--------------FDVLRRKNKSAASELSNLSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSKFASGSKVMML-----------DXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVEAVA---------------------------------------------------------------PPRHTRQTFLFSATLMIPEGGRFHKGKTK----------KYRNALSVLERVMKRVGLRGKPAVVDLSIAEPDMGIPGAKAIISEEDQRKMKKQQDNV-------------ALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRRLTSLLSLLNLPVFALHAEMQQRQRLKKLDGFRAHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARADKDGLSISLVSPVDAKFHVQICKML----------------------QRPTGLSDFPFDHRYMETIDERVRLAKSINDQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDSKKKTTANQSVQTLRAQLNRLLSQPLRPVGSTRKF 752          
BLAST of NO09G01710 vs. NCBI_GenBank
Match: XP_002900785.1 (DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4] >EEY59592.1 DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 325.1 bits (832), Expect = 8.000e-85
Identity = 282/783 (36.02%), Postives = 385/783 (49.17%), Query Frame = 0
Query:  230 LHPLLLRNLHRQGFYSPTPIQRRALPLAMPXXXXXXXXXXDLMGAAETGSGKTLAYGLPILDYLLKRREEKKDGEEDKDAGEGETSNKYGALAALILCPTRELALQVTEHLQEMLVGDVAPGRARINVMGIVGGLSDTKQARLLRRMPEVVVATVGRCWEMIKNGQEGHLRDMG-RLRFLVLDEADRMVEEGHFPEMQALLTRVVEQGKTYQRDYDAVRRMKREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCEVPTKSLKDILKEAKRMGLXXXXXXXXXXXXXXXXXXXXXXXXXXXILIEGSVDGLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPMASIRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKXXXXXXXXXXXXXXVMGRIMREVGMRGVPAIIDLTSGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLALPTGLQLCHVKTVGGHKDAHLYHFLRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDYFRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARANRNGLSFSLVAPRDEKMHAEVCRALLSGQTAXXXXXXXXXXXXXXXXXXPLSMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREADLELDADLLEETEA-----GTEKERQRARQMELDRQRLDELLSAPL--VQQRRKFINVAEKL 1005
            LHPLL+++L   GF +PT IQ R L  A+           D++GAA TGSGKTLA+GLPIL  LL  RE+    ++ K               ALIL PTRELA+Q+ +HL++M+          I V+ +VGG++  KQ R+L   PE+V+ T GR W++I+   E H++D+   LRFLV+DEADRM++ G + E++ +              ++ +RR  +      XXXXXXXXXXXXXXXXXXXXXXXXXXXX        +V    L D+LK  ++                                 + SV   VE                                                       +A+ R +     RQT +FSATL +PE          GG+              V+ R+M+ VG+RG PA++DL+   +                                       +L+LP GL+LC  +     +D+ LY FL +YPGRTIIF N+I Q R+L+ LLTLL LP  ALHA+MQQR RLK LD FRSH   +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS SLV+P D K H ++C+ L                        P  ++ FP D R L    ER+ LA  I   E  AG+ ++  +WF + A  ADL+LD DLL E  A       +K++   + ++  R +L  LL+APL  V   RKF  + ++L
Sbjct:  119 LHPLLMQSLQTCGFSAPTRIQERTLLPAL-------VDNRDVVGAAPTGSGKTLAFGLPILSQLLHEREQPGYIKDCK---------------ALILTPTRELAIQIQQHLEKMV------RNREIGVVTLVGGMAVQKQKRILTYRPEIVIGTPGRLWDIIETNHE-HMQDLATSLRFLVVDEADRMLQPGSYSELEKI--------------FEVLRRKNKSAASELXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSKFASGSKV--MMLDDVLKMQRKQQQKSATAKE----------------------TDKSVKTKVE-------------------------------------------------------VAASRHV-----RQTFLFSATLTIPE----------GGRFQKTKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIAESDIGIPGAKPLMSEEAERKLKKQQQNV-------------ALSLPAGLELCQHEVTESTRDSFLYFFLTQYPGRTIIFLNAIHQVRKLSGLLTLLNLPVFALHAEMQQRQRLKKLDGFRSHSKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML----------------------QRPTGLSDFPFDHRYLEAIDERLRLAKSINEQENAAGKLKSEATWFQQMAAAADLDLDEDLLFELGAKQRNQDGKKKKTANQSVQSLRAQLSRLLAAPLRPVGSARKFRQLHKEL 729          
BLAST of NO09G01710 vs. NCBI_GenBank
Match: ETI36360.1 (hypothetical protein F443_17508 [Phytophthora parasitica P1569] >ETL83255.1 hypothetical protein L917_16765 [Phytophthora parasitica] >ETP34299.1 hypothetical protein F442_17359 [Phytophthora parasitica P10297] >KUF83616.1 ATP-dependent RNA helicase ddx24 [Phytophthora nicotianae])

HSP 1 Score: 322.4 bits (825), Expect = 5.200e-84
Identity = 282/783 (36.02%), Postives = 379/783 (48.40%), Query Frame = 0
Query:  230 LHPLLLRNLHRQGFYSPTPIQRRALPLAMPXXXXXXXXXXDLMGAAETGSGKTLAYGLPILDYLLKRREEKKDGEEDKDAGEGETSNKYGALAALILCPTRELALQVTEHLQEMLVGDVAPGRARINVMGIVGGLSDTKQARLLRRMPEVVVATVGRCWEMIKNGQEGHLRDMG-RLRFLVLDEADRMVEEGHFPEMQALLTRVVEQGKTYQRDYDAVRRMKREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCEVPTKSLKDILKEAKRMGLXXXXXXXXXXXXXXXXXXXXXXXXXXXILIEGSVDGLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPMASIRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKXXXXXXXXXXXXXXVMGRIMREVGMRGVPAIIDLTSGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLALPTGLQLCHVKTVGGHKDAHLYHFLRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDYFRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARANRNGLSFSLVAPRDEKMHAEVCRALLSGQTAXXXXXXXXXXXXXXXXXXPLSMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREADLELDADLLEETEAGTE----KERQRARQ-MELDRQRLDELLSAPL--VQQRRKFINVAEKL 1005
            LHPLL+++L   GF +PT IQ R L  A+           D++GAA TGSGKTLA+GLPIL  LL  RE+    ++ K               ALIL PTRELA+Q+ +HL++M+          I V+ +VGG++  KQ R+L   PE+V+ T GR W++I+   E H++D+   LRFLV+DEADRM++ G +PE++ +              +D +RR  +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               L D+LK  ++                                                                                                  A    + P   RQT +FSATL +PE          GG+              V+ R+M+ VG+RG PA++DL+                                           +L+LP GL+LC  +     +D+ LY+FL +YPGRTIIF N+I Q R+L  LL LL LP  ALHA+MQQR RLK LD FRSH   +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS SLV+P D K H ++C+ L                        P  ++ FP D R +    ER+ LA  I   E  AG+ ++  +WF + A  ADL++D DLL E  A       K+R+ A Q ++  R +L  LL+APL  V   RKF  + ++L
Sbjct:  176 LHPLLMQSLQTCGFTAPTRIQERTLLPAL-------VDNRDVVGAAPTGSGKTLAFGLPILSQLLHEREQPGYTKDCK---------------ALILTPTRELAIQIQQHLEKMV------RNREIGVVTLVGGMAVQKQKRILSYRPEIVIGTPGRLWDIIEANHE-HMQDLATTLRFLVVDEADRMLQPGSYPELEKI--------------FDVLRRKSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSKFASG---SKVLMLDDVLKMQRKQ--------------------------------------------------------------------------------QDKEEKTKGNEKAAKTKAKGEAVTPRHVRQTFLFSATLTIPE----------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIAEPDMGIPGAKPIISEEVERKMKKQQENV-------------ALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML----------------------QRPTGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKFRQLHKEL 787          
BLAST of NO09G01710 vs. NCBI_GenBank
Match: ETM36470.1 (hypothetical protein L914_16847 [Phytophthora parasitica])

HSP 1 Score: 322.4 bits (825), Expect = 5.200e-84
Identity = 282/783 (36.02%), Postives = 379/783 (48.40%), Query Frame = 0
Query:  230 LHPLLLRNLHRQGFYSPTPIQRRALPLAMPXXXXXXXXXXDLMGAAETGSGKTLAYGLPILDYLLKRREEKKDGEEDKDAGEGETSNKYGALAALILCPTRELALQVTEHLQEMLVGDVAPGRARINVMGIVGGLSDTKQARLLRRMPEVVVATVGRCWEMIKNGQEGHLRDMG-RLRFLVLDEADRMVEEGHFPEMQALLTRVVEQGKTYQRDYDAVRRMKREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCEVPTKSLKDILKEAKRMGLXXXXXXXXXXXXXXXXXXXXXXXXXXXILIEGSVDGLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPMASIRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKXXXXXXXXXXXXXXVMGRIMREVGMRGVPAIIDLTSGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLALPTGLQLCHVKTVGGHKDAHLYHFLRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDYFRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARANRNGLSFSLVAPRDEKMHAEVCRALLSGQTAXXXXXXXXXXXXXXXXXXPLSMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREADLELDADLLEETEAGTE----KERQRARQ-MELDRQRLDELLSAPL--VQQRRKFINVAEKL 1005
            LHPLL+++L   GF +PT IQ R L  A+           D++GAA TGSGKTLA+GLPIL  LL  RE+    ++ K               ALIL PTRELA+Q+ +HL++M+          I V+ +VGG++  KQ R+L   PE+V+ T GR W++I+   E H++D+   LRFLV+DEADRM++ G +PE++ +              +D +RR  +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               L D+LK  ++                                                                                                  A    + P   RQT +FSATL +PE          GG+              V+ R+M+ VG+RG PA++DL+                                           +L+LP GL+LC  +     +D+ LY+FL +YPGRTIIF N+I Q R+L  LL LL LP  ALHA+MQQR RLK LD FRSH   +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS SLV+P D K H ++C+ L                        P  ++ FP D R +    ER+ LA  I   E  AG+ ++  +WF + A  ADL++D DLL E  A       K+R+ A Q ++  R +L  LL+APL  V   RKF  + ++L
Sbjct:  176 LHPLLMQSLQTCGFTAPTRIQERTLLPAL-------VDNRDVVGAAPTGSGKTLAFGLPILSQLLHEREQPGYTKDCK---------------ALILTPTRELAIQIQQHLEKMV------RNREIGVVTLVGGMAVQKQKRILSYRPEIVIGTPGRLWDIIEANHE-HMQDLATTLRFLVVDEADRMLQPGSYPELEKI--------------FDVLRRKSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSKFASG---SKVLMLDDVLKMQRKQ--------------------------------------------------------------------------------QDKEEKTKGNEKAAKTKAKGEAVTPRHVRQTFLFSATLTIPE----------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIAEPDMGIPGAKPIISEEVERKMKKQQENV-------------ALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML----------------------QRPTGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKFRQLHKEL 787          
BLAST of NO09G01710 vs. NCBI_GenBank
Match: KUF94382.1 (hypothetical protein AM588_10009856 [Phytophthora nicotianae])

HSP 1 Score: 322.4 bits (825), Expect = 5.200e-84
Identity = 282/783 (36.02%), Postives = 379/783 (48.40%), Query Frame = 0
Query:  230 LHPLLLRNLHRQGFYSPTPIQRRALPLAMPXXXXXXXXXXDLMGAAETGSGKTLAYGLPILDYLLKRREEKKDGEEDKDAGEGETSNKYGALAALILCPTRELALQVTEHLQEMLVGDVAPGRARINVMGIVGGLSDTKQARLLRRMPEVVVATVGRCWEMIKNGQEGHLRDMG-RLRFLVLDEADRMVEEGHFPEMQALLTRVVEQGKTYQRDYDAVRRMKREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCEVPTKSLKDILKEAKRMGLXXXXXXXXXXXXXXXXXXXXXXXXXXXILIEGSVDGLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPMASIRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKXXXXXXXXXXXXXXVMGRIMREVGMRGVPAIIDLTSGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLALPTGLQLCHVKTVGGHKDAHLYHFLRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDYFRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARANRNGLSFSLVAPRDEKMHAEVCRALLSGQTAXXXXXXXXXXXXXXXXXXPLSMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREADLELDADLLEETEAGTE----KERQRARQ-MELDRQRLDELLSAPL--VQQRRKFINVAEKL 1005
            LHPLL+++L   GF +PT IQ R L  A+           D++GAA TGSGKTLA+GLPIL  LL  RE+    ++ K               ALIL PTRELA+Q+ +HL++M+          I V+ +VGG++  KQ R+L   PE+V+ T GR W++I+   E H++D+   LRFLV+DEADRM++ G +PE++ +              +D +RR  +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               L D+LK  ++                                                                                                  A    + P   RQT +FSATL +PE          GG+              V+ R+M+ VG+RG PA++DL+                                           +L+LP GL+LC  +     +D+ LY+FL +YPGRTIIF N+I Q R+L  LL LL LP  ALHA+MQQR RLK LD FRSH   +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS SLV+P D K H ++C+ L                        P  ++ FP D R +    ER+ LA  I   E  AG+ ++  +WF + A  ADL++D DLL E  A       K+R+ A Q ++  R +L  LL+APL  V   RKF  + ++L
Sbjct:  176 LHPLLMQSLQTCGFTAPTRIQERTLLPAL-------VDNRDVVGAAPTGSGKTLAFGLPILSQLLHEREQPGYTKDCK---------------ALILTPTRELAIQIQQHLEKMV------RNREIGVVTLVGGMAVQKQKRILSYRPEIVIGTPGRLWDIIEANHE-HMQDLATTLRFLVVDEADRMLQPGSYPELEKI--------------FDVLRRKSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSKFASG---SKVLMLDDVLKMQRKQ--------------------------------------------------------------------------------QDKEEKTKGNEKAAKTKAKGEAVTPRHVRQTFLFSATLTIPE----------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIAEPDMGIPGAKPIISEEIERKMKKQQENV-------------ALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML----------------------QRPTGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKFRQLHKEL 787          
BLAST of NO09G01710 vs. NCBI_GenBank
Match: XP_008895989.1 (hypothetical protein PPTG_03942 [Phytophthora parasitica INRA-310] >ETN18296.1 hypothetical protein PPTG_03942 [Phytophthora parasitica INRA-310])

HSP 1 Score: 322.0 bits (824), Expect = 6.800e-84
Identity = 282/783 (36.02%), Postives = 379/783 (48.40%), Query Frame = 0
Query:  230 LHPLLLRNLHRQGFYSPTPIQRRALPLAMPXXXXXXXXXXDLMGAAETGSGKTLAYGLPILDYLLKRREEKKDGEEDKDAGEGETSNKYGALAALILCPTRELALQVTEHLQEMLVGDVAPGRARINVMGIVGGLSDTKQARLLRRMPEVVVATVGRCWEMIKNGQEGHLRDMG-RLRFLVLDEADRMVEEGHFPEMQALLTRVVEQGKTYQRDYDAVRRMKREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCEVPTKSLKDILKEAKRMGLXXXXXXXXXXXXXXXXXXXXXXXXXXXILIEGSVDGLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPMASIRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKXXXXXXXXXXXXXXVMGRIMREVGMRGVPAIIDLTSGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLALPTGLQLCHVKTVGGHKDAHLYHFLRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDYFRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARANRNGLSFSLVAPRDEKMHAEVCRALLSGQTAXXXXXXXXXXXXXXXXXXPLSMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREADLELDADLLEETEAGTE----KERQRARQ-MELDRQRLDELLSAPL--VQQRRKFINVAEKL 1005
            LHPLL+++L   GF +PT IQ R L  A+           D++GAA TGSGKTLA+GLPIL  LL  RE+    ++ K               ALIL PTRELA+Q+ +HL++M+          I V+ +VGG++  KQ R+L   PE+V+ T GR W++I+   E H++D+   LRFLV+DEADRM++ G +PE++ +              +D +RR  +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               L D+LK  ++                                                                                                  A    + P   RQT +FSATL +PE          GG+              V+ R+M+ VG+RG PA++DL+                                           +L+LP GL+LC  +     +D+ LY+FL +YPGRTIIF N+I Q R+L  LL LL LP  ALHA+MQQR RLK LD FRSH   +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS SLV+P D K H ++C+ L                        P  ++ FP D R +    ER+ LA  I   E  AG+ ++  +WF + A  ADL++D DLL E  A       K+R+ A Q ++  R +L  LL+APL  V   RKF  + ++L
Sbjct:  176 LHPLLMQSLQTCGFTAPTRIQERTLLPAL-------VDNRDVVGAAPTGSGKTLAFGLPILSQLLHEREQPGYTKDCK---------------ALILTPTRELAIQIQQHLEKMV------RNREIGVVTLVGGMAVQKQKRILSYRPEIVIGTPGRLWDIIEANHE-HMQDLATTLRFLVVDEADRMLQPGSYPELEKI--------------FDVLRRKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSKFASG---SKVLMLDDVLKMQRKQ--------------------------------------------------------------------------------QDKEEKTKGNEKAAKTKAKGEAVTPRHVRQTFLFSATLTIPE----------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIAEPDMGIPGAKPIISEEVERKMKKQQENV-------------ALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML----------------------QRPTGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQPVQSLRAQLSRLLAAPLRPVGSARKFRQLHKEL 787          
BLAST of NO09G01710 vs. NCBI_GenBank
Match: ETP06154.1 (hypothetical protein F441_17376 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 322.0 bits (824), Expect = 6.800e-84
Identity = 282/783 (36.02%), Postives = 379/783 (48.40%), Query Frame = 0
Query:  230 LHPLLLRNLHRQGFYSPTPIQRRALPLAMPXXXXXXXXXXDLMGAAETGSGKTLAYGLPILDYLLKRREEKKDGEEDKDAGEGETSNKYGALAALILCPTRELALQVTEHLQEMLVGDVAPGRARINVMGIVGGLSDTKQARLLRRMPEVVVATVGRCWEMIKNGQEGHLRDMG-RLRFLVLDEADRMVEEGHFPEMQALLTRVVEQGKTYQRDYDAVRRMKREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCEVPTKSLKDILKEAKRMGLXXXXXXXXXXXXXXXXXXXXXXXXXXXILIEGSVDGLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPMASIRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKXXXXXXXXXXXXXXVMGRIMREVGMRGVPAIIDLTSGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLALPTGLQLCHVKTVGGHKDAHLYHFLRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDYFRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARANRNGLSFSLVAPRDEKMHAEVCRALLSGQTAXXXXXXXXXXXXXXXXXXPLSMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREADLELDADLLEETEAGTE----KERQRARQ-MELDRQRLDELLSAPL--VQQRRKFINVAEKL 1005
            LHPLL+++L   GF +PT IQ R L  A+           D++GAA TGSGKTLA+GLPIL  LL  RE+    ++ K               ALIL PTRELA+Q+ +HL++M+          I V+ +VGG++  KQ R+L   PE+V+ T GR W++I+   E H++D+   LRFLV+DEADRM++ G +PE++ +              +D +RR  +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               L D+LK  ++                                                                                                  A    + P   RQT +FSATL +PE          GG+              V+ R+M+ VG+RG PA++DL+                                           +L+LP GL+LC  +     +D+ LY+FL +YPGRTIIF N+I Q R+L  LL LL LP  ALHA+MQQR RLK LD FRSH   +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS SLV+P D K H ++C+ L                        P  ++ FP D R +    ER+ LA  I   E  AG+ ++  +WF + A  ADL++D DLL E  A       K+R+ A Q ++  R +L  LL+APL  V   RKF  + ++L
Sbjct:  176 LHPLLMQSLQTCGFTAPTRIQERTLLPAL-------VDNRDVVGAAPTGSGKTLAFGLPILSQLLHEREQPGYTKDCK---------------ALILTPTRELAIQIQQHLEKMV------RNREIGVVTLVGGMAVQKQKRILSYRPEIVIGTPGRLWDIIEANHE-HMQDLATTLRFLVVDEADRMLQPGSYPELEKI--------------FDVLRRKSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSKFASG---SKVLMLDDVLKMQRKQ--------------------------------------------------------------------------------QDKEEKTKGNEKAAKTKAKGEAVTPRHVRQTFLFSATLTIPE----------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIAEPDMGIPGAKPIISEEVERKMKKQQENV-------------ALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML----------------------QRPTGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEVTWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKFRQLHKEL 787          
BLAST of NO09G01710 vs. NCBI_GenBank
Match: ETO65112.1 (hypothetical protein F444_17548 [Phytophthora parasitica P1976])

HSP 1 Score: 321.6 bits (823), Expect = 8.900e-84
Identity = 281/783 (35.89%), Postives = 378/783 (48.28%), Query Frame = 0
Query:  230 LHPLLLRNLHRQGFYSPTPIQRRALPLAMPXXXXXXXXXXDLMGAAETGSGKTLAYGLPILDYLLKRREEKKDGEEDKDAGEGETSNKYGALAALILCPTRELALQVTEHLQEMLVGDVAPGRARINVMGIVGGLSDTKQARLLRRMPEVVVATVGRCWEMIKNGQEGHLRDMG-RLRFLVLDEADRMVEEGHFPEMQALLTRVVEQGKTYQRDYDAVRRMKREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCEVPTKSLKDILKEAKRMGLXXXXXXXXXXXXXXXXXXXXXXXXXXXILIEGSVDGLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPMASIRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKXXXXXXXXXXXXXXVMGRIMREVGMRGVPAIIDLTSGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLALPTGLQLCHVKTVGGHKDAHLYHFLRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDYFRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARANRNGLSFSLVAPRDEKMHAEVCRALLSGQTAXXXXXXXXXXXXXXXXXXPLSMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREADLELDADLLEETEAGTE----KERQRARQ-MELDRQRLDELLSAPL--VQQRRKFINVAEKL 1005
            LHPLL+++L   GF +PT IQ R L  A+           D++GAA TGSGKTLA+GLPIL  LL  RE+    ++ K               ALIL PTRELA+Q+ +HL++M+          I V+ +VGG++  KQ R+L   PE+V+ T GR W++I+   E H++D+   LRFLV+DEADRM++ G +PE++ +              +D +RR  +     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             L D+LK  ++                                                                                                  A    + P   RQT +FSATL +PE          GG+              V+ R+M+ VG+RG PA++DL+                                           +L+LP GL+LC  +     +D+ LY+FL +YPGRTIIF N+I Q R+L  LL LL LP  ALHA+MQQR RLK LD FRSH   +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS SLV+P D K H ++C+ L                        P  ++ FP D R +    ER+ LA  I   E  AG+ ++  +WF + A  ADL++D DLL E  A       K+R+ A Q ++  R +L  LL+APL  V   RKF  + ++L
Sbjct:  176 LHPLLMQSLQTCGFTAPTRIQERTLLPAL-------VDNRDVVGAAPTGSGKTLAFGLPILSQLLHEREQPGYTKDCK---------------ALILTPTRELAIQIQQHLEKMV------RNREIGVVTLVGGMAVQKQKRILSYRPEIVIGTPGRLWDIIEANHE-HMQDLATTLRFLVVDEADRMLQPGSYPELEKI--------------FDVLRRKSKS---TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMSKFASGSKVLMLDDVLKMQRKQ--------------------------------------------------------------------------------QDKEEKTKGNEKAAKTKAKGEAVTPRHVRQTFLFSATLTIPE----------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIAEPDMGIPGAKPIISEEVERKMKKQQENV-------------ALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML----------------------QRPTGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKFRQLHKEL 787          
The following BLAST results are available for this feature:
BLAST of NO09G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27530.11.400e-12160.63atp-dependent rna helicase ddx24, partial [Nannoch... [more]
GAY01422.12.800e-8540.28Hypothetical protein PINS_009266 [Pythium insidios... [more]
XP_009521679.16.100e-8538.39hypothetical protein PHYSODRAFT_480097 [Phytophtho... [more]
XP_002900785.18.000e-8536.02DEAD/DEAH box RNA helicase, putative [Phytophthora... [more]
ETI36360.15.200e-8436.02hypothetical protein F443_17508 [Phytophthora para... [more]
ETM36470.15.200e-8436.02hypothetical protein L914_16847 [Phytophthora para... [more]
KUF94382.15.200e-8436.02hypothetical protein AM588_10009856 [Phytophthora ... [more]
XP_008895989.16.800e-8436.02hypothetical protein PPTG_03942 [Phytophthora para... [more]
ETP06154.16.800e-8436.02hypothetical protein F441_17376 [Phytophthora para... [more]
ETO65112.18.900e-8435.89hypothetical protein F444_17548 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL121nonsL121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR128ngnoR128Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010706NSK010706Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01710.1NO09G01710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|541673gene_4380Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100015g81gene2960Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01710.1NO09G01710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01710 ID=NO09G01710|Name=NO09G01710|organism=Nannochloropsis oceanica|type=gene|length=3681bp
ACGTCTGATTCAATTAGTCGCTGTGTGTACGTGTGTGTAAGTTGAGAGCG
AAAAGCGGCGGTGAGTGAATGTCGCTTGCCGGCGCCTGTACGAGAAACCA
TTTTCCACCATGGCAGCTGTAATTGGGGTTTTGATGAAATGGCAACAGTT
TAAGAGTCTTGCCAATTGCTTGCTTTCTGTTGTTTGATGGAAGGAATGTG
CCAACGCAGCTCATTTTGATAATTTGATATCCGTTCTCCCCACCCCTGGA
AGCCGGTGCCCCAACCCCTCTCATTCCTGAAGTCCCACACCAAAGCATCC
ACCTGAACCCAACACAGCTCACACACACTCGACGAAATGCCCAAGCGCAA
GAAGCAACCAGGGGCCAATGGATGGGATGCCTTGCCCTGGTCAAGCGTCA
AGgtacgtggggacatagggaaatcgatgaacggctatcacgcgggccct
ggcggatcctggtgcatacgcatggccgcaaagaatagcgtgtgctggtg
ataagcctaggatcctagtgggcctgagtgctcccgttttgtcgaccagt
tccatgtcaatatctttcaatccgtccatctcaagcgcgctcccccctct
tccacgcagGTCAAAGAAGGCGACCTGGGCGGGGCAGACGATTGCTTTGC
TTTCACCATAGAGGAGGTGGATGGGAGCCATTATGTGATCGAGAAAGATA
CTTTGGGGGGCTTCAGTGTCAAGTGCCATCGTGGTGGGGGCAGCGGCGGC
GCAAGTGACGTTCAAGGAGCGGGAGGGAAAGATGTGAGGGCCGCCGTTTT
GGAGGGTAATGTTATTAAGCAGAAGCAGAAGAAAGAGAAGCCAACGAAGA
AACAAAAAATCAGCAAAAAGGAGAAGGAAGAGGAAGAGGAAGAATTAGAG
CTGGGGGAAGGACCAGGGGCGGCAGAAGTGGTGGAGATAGAGTACGAGAC
TGTCAGCTGCCCTGCAGGGAGGGCATCTGCTGGTGCGACAAGAGCGATCG
AAGCTCATGAAAAGCCAAGGGAGGCAGATGACAAAAAAGGGGACGCCCCT
GCCAAGCAGCCCAAGAAGAAGGAGCGAAAGAGAGACAAGAAACCTGCCAC
TGGTGGTGGTGGTGCTGCTGCTGCTGCTCCAGCCAACCCCACCGTCTCTC
CTCCAAGTCCTCAGACTCCTCTCGTGGATATCAAGGCACAACTATCGCAT
TGGTCCCCTGCAGCTTTGAGCGGCGTCTCCCTTCACCCTTTGCTATTGCG
CAACCTCCACCGTCAAGGATTTTACAGCCCCACCCCAATTCAACGGCGAG
CTCTGCCTCTGGCCATGCCAGGAGGAGGAGGAGGAGGAGGAGGGGGAAAG
GATTTGATGGGCGCCGCAGAAACGGGGTCGGGGAAGACATTAGCTTACGG
CTTGCCTATATTGGATTACTTGTTGAAACGCCGGGAAGAGAAGAAGGATG
GGGAGGAGGACAAGGACGCGGGGGAGGGAGAGACCAGCAACAAGTACGGG
GCTTTGGCGGCATTGATTCTCTGTCCTACGCGAGAGCTGGCATTGCAGGT
GACAGAACACCTGCAAGAGATGTTGGTAGGTGATGTAGCCCCTGGGCGTG
CGCGGATAAATGTGATGGGGATCGTGGGAGGTCTCTCGGATACTAAGCAA
GCGAGGTTGCTGCGACGGATGCCGGAGGTGGTGGTGGCAACGGTGGGGAG
GTGCTGGGAGATGATTAAGAATGGGCAGGAGGGGCATTTGAGGGATATGG
GCCGATTGAGGTTTCTTGTGTTGGATGAGGCGGATCGGATGGTGGAGGAA
GGGCATTTCCCGGAGATGCAGGCGTTGTTGACACGAGTAGTGGAGCAGGG
GAAGACGTACCAGCGGGATTACGATGCGGTGCGGAGGATGAAGAGGGAGG
GGGAGGAAAAGGCGAAACTGTTGTTGCAACAACAAGGGAGGAAGGACAAG
AGATTGATCAAGGAGGAAGAGGAGGAAGGGGAGGAGGAGGAAGAAGAGGA
TGGGGAGGAGGAGGATTTGTGCGAGGTTCCGACGAAGAGTTTAAAAGATA
TTTTGAAAGAAGCCAAGAGGATGGGACTGAAGGGGGTGCATGGTTTGGAG
GAGCTTGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAGAGGAGGAGGAGGA
GGATAACGATATTTTGATCGAGGGGAGTGTCGATGGCTTGGTTGAGGAGG
ATGACGAGGTGGAGGAGGATGGCGAGGAGGAGGAGAACGAGGAGGAGGAG
GAGAACGAGGTGGAGGAAGAGGGAGGGGGGGAGAAAGAGGAGGAGATGGA
TGATAATGAGGAAGGGCTTGGAGAGAATGAAAAAGCGAATGCTGAGGAGA
AAAAACCTCCAATGGCATCAATTCGTGAGTTGCCTCCTCCCGTGACGCGT
CAGACATTGATTTTCAGCGCGACCCTCGTCATGCCCGAAGAGATGCGTGA
GGGAAAAGGAGTGAAGAAGGGAGGGAAGAAACAGCAGAAGAAGGGGAAGG
GAGGGAAGGATGGTAAAGATGTGATGGGGAGGATCATGCGTGAGGTCGGC
ATGCGCGGGGTACCTGCCATAATCGATCTGACCAGTGGTTCCGCCAAGCA
AGAAGACGCGGCAGCAGCAGCAGCTGCCACTGCTGTTGCTGCCGCGGATG
CCCACCCTCTCCCTCTCCCCACAACTCCTCGTACCGCCACCACTGCTACT
GTGGTTGCTCCTTCCCTAGCCTTGCCCACGGGCCTGCAACTCTGCCATGT
CAAGACCGTGGGCGGACACAAGGATGCTCACCTCTACCACTTCCTCCGAC
GCTACCCCGGCCGCACCATCATCTTCACCAACAGCATCGACCAAACACGC
CGCCTTGCCCAGCTCCTCACCCTTCTTCGCCTCCCCGCCAAAGCCCTGCA
TGCCAAGATGCAACAGCGTGCCCGCCTCAAGTCCCTGGATTACTTCCGGT
CCCATCAAGCCGCGGTATTGGTTGCAACCGATGTGGCGGCGCGGGGTTTG
GACATCCCCCTTGTCGAGCACGTCATCCATTATGACTTACCCCGTTCCTT
GGAGGTGTTTGTGCATAGAGCAGGGAGGACCGCTCGGGCGAATAGGAATG
GTTTGTCGTTTTCCTTGGTCGCGCCACGGGACGAAAAAATGCATGCCGAA
GTGTGCCGGGCTTTGCTTTCCGGTCAGACAGCGGAGGAGGACGAGGAGGA
AGAAGAAAGGGAAGGAAAGGAGGAAGAGCAAAGGCAGCCGTTGAGCATGA
CGACGTTTCCGGTAGACTTACGGGAATTGAATGGGGCGAGGGAACGCGTG
CATTTGGCGGGGAAGATAGTGGGGCATGAGCAGGAGGCAGGGCGACAACA
GGCGAGTCAAAGTTGGTTTTTAAAGAGGGCTCGTGAGGCTGATCTTGAAC
TGGATGCAGATTTGTTGGAAGAGACGGAGGCGGGCACCGAAAAGGAGAGG
CAGAGAGCGAGACAGATGGAACTCGATCGACAGAGATTGGATGAGTTGTT
GTCGGCGCCGCTGGTCCAGCAGAGGAGGAAGTTTATTAATGTGGCTGAAA
AATTGCAAGTGTTGAAGCAGGCAGAGGGGTGTAAGGATGCGATACAGGTG
GCTGCGAAAACAATTTTGGCGGCGAAGATGGCACGTAGGCAGGATAGGAA
AAATAGGAAGGGAGGAAACGGGGGGACATAA
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protein sequence of NO09G01710.1

>NO09G01710.1-protein ID=NO09G01710.1-protein|Name=NO09G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1046bp
MPKRKKQPGANGWDALPWSSVKVKEGDLGGADDCFAFTIEEVDGSHYVIE
KDTLGGFSVKCHRGGGSGGASDVQGAGGKDVRAAVLEGNVIKQKQKKEKP
TKKQKISKKEKEEEEEELELGEGPGAAEVVEIEYETVSCPAGRASAGATR
AIEAHEKPREADDKKGDAPAKQPKKKERKRDKKPATGGGGAAAAAPANPT
VSPPSPQTPLVDIKAQLSHWSPAALSGVSLHPLLLRNLHRQGFYSPTPIQ
RRALPLAMPGGGGGGGGGKDLMGAAETGSGKTLAYGLPILDYLLKRREEK
KDGEEDKDAGEGETSNKYGALAALILCPTRELALQVTEHLQEMLVGDVAP
GRARINVMGIVGGLSDTKQARLLRRMPEVVVATVGRCWEMIKNGQEGHLR
DMGRLRFLVLDEADRMVEEGHFPEMQALLTRVVEQGKTYQRDYDAVRRMK
REGEEKAKLLLQQQGRKDKRLIKEEEEEGEEEEEEDGEEEDLCEVPTKSL
KDILKEAKRMGLKGVHGLEELEEEEEAEEEEEEEEEDNDILIEGSVDGLV
EEDDEVEEDGEEEENEEEEENEVEEEGGGEKEEEMDDNEEGLGENEKANA
EEKKPPMASIRELPPPVTRQTLIFSATLVMPEEMREGKGVKKGGKKQQKK
GKGGKDGKDVMGRIMREVGMRGVPAIIDLTSGSAKQEDAAAAAAATAVAA
ADAHPLPLPTTPRTATTATVVAPSLALPTGLQLCHVKTVGGHKDAHLYHF
LRRYPGRTIIFTNSIDQTRRLAQLLTLLRLPAKALHAKMQQRARLKSLDY
FRSHQAAVLVATDVAARGLDIPLVEHVIHYDLPRSLEVFVHRAGRTARAN
RNGLSFSLVAPRDEKMHAEVCRALLSGQTAEEDEEEEEREGKEEEQRQPL
SMTTFPVDLRELNGARERVHLAGKIVGHEQEAGRQQASQSWFLKRAREAD
LELDADLLEETEAGTEKERQRARQMELDRQRLDELLSAPLVQQRRKFINV
AEKLQVLKQAEGCKDAIQVAAKTILAAKMARRQDRKNRKGGNGGT*
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Synonyms
Publications