NO09G01670, NO09G01670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01670 vs. NCBI_GenBank
Match: EWM27595.1 (isopentenyl-diphosphate delta-isomerase [Nannochloropsis gaditana]) HSP 1 Score: 393.3 bits (1009), Expect = 8.100e-106 Identity = 198/279 (70.97%), Postives = 218/279 (78.14%), Query Frame = 0 Query: 76 ATTSATAFDPEQARLFEEERIIAVTFDDKPIKAISKRNGHRNQKGPPLHRAFSVFLFDTLGRLLLQKRAAAKITFPSTWTNTCCSHPLWTQAELGDDVQPNDPVLGCKRAAIRKLEQELGIPSSSLAPSDFTYMNRIHYISDSNPEWGEHEIDYIFLVRKDVELNPNLNEVSETRYVDPRELRGMIRRAEINRGVSREYLLAEEAA-AGTQRVGGRGEGKVGEKRTEEEEV-GPVQFTPWCRAIMEKWLFVWWSDVGEDAKALEKHRDVKRIFRIGRVD 353 A TS +AFDPEQARLFEEE+I+AVTFDDKP+K ISKR GH N+KGPPLHRAFSVFLFDT RLLLQKRA KITFP+ WTNTCCSHPLW++ ELGDD Q DPVLGCKRAAIRKLE ELGIP SSL DF YM+RIHYISDS EWGEHEIDYI L RKDV L PN NEVSETRYV EL+ M+RRAE++RG S E +LAE+AA G Q VGGR E+E+V G + FTPW RAIME+WL+ WW DVG D LEKHRD RI RIGRVD Sbjct: 64 AATSRSAFDPEQARLFEEEQIVAVTFDDKPLKPISKRAGHENRKGPPLHRAFSVFLFDTQNRLLLQKRAPTKITFPNAWTNTCCSHPLWSEHELGDDRQ--DPVLGCKRAAIRKLEHELGIPISSLRHEDFIYMSRIHYISDSGAEWGEHEIDYILLARKDVVLTPNENEVSETRYVAAPELKAMMRRAELHRGESPEVILAEDAALGGAQGVGGRD--------PEQEDVRGHIYFTPWSRAIMERWLYTWWPDVGADMGKLEKHRDTARIHRIGRVD 332
BLAST of NO09G01670 vs. NCBI_GenBank
Match: CEM00826.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 205.7 bits (522), Expect = 2.400e-49 Identity = 117/275 (42.55%), Postives = 149/275 (54.18%), Query Frame = 0 Query: 84 DPEQARLFEEERIIAVTFDDKPIKAISKRNGHRNQKGPPLHRAFSVFLFDTLGRLLLQKRAAAKITFPSTWTNTCCSHPLWTQAELGDDVQPNDPVLGCKRAAIRKLEQELGIPSSSLAPSD--FTYMNRIHYISDS--NPEWGEHEIDYIFLVR-----KDVELNPNLNEVSETRYVDPRELRGMIRRAEINRGVSREYLLAEEAAAGTQRVGGRGEGKVGEKRTEEEEVGPVQFTPWCRAIMEKWLFVWWSDVGEDAKALEKHRDVKRIFRIG 350 DP QA L +ER+I V DD + SK + H KGP LHRAFSVFLFD G LLLQ+RAAAK+TFP W NTCCSHPL+ ELG D QP PV G KRAA+RKL+ ELG+ SL D TY+ R+HY ++S +P+WGEHEIDYI + + D+ PN NEV R+VD +R M R+ E G + TPWC+ I++K+L+ WW + + L H D I+R+G Sbjct: 2 DPTQASLM-QERVILVDKDDNVLGPASKIDTHATAKGPLLHRAFSVFLFDRDGLLLLQQRAAAKVTFPLFWANTCCSHPLYCTEELGWDSQPARPVEGAKRAAVRKLQHELGL---SLKGGDTVMTYLTRLHYCAESPTDPQWGEHEIDYILIAQDDRPFADISFVPNSNEVEAVRWVDQPAMRDMARQC---------------------------------------EEGQLLITPWCKLIIDKFLYPWWDSLSD----LSPHMDPMTIYRLG 229
BLAST of NO09G01670 vs. NCBI_GenBank
Match: OLL22636.1 (Isopentenyl-diphosphate Delta-isomerase [Neolecta irregularis DAH-3]) HSP 1 Score: 205.7 bits (522), Expect = 2.400e-49 Identity = 114/270 (42.22%), Postives = 153/270 (56.67%), Query Frame = 0 Query: 81 TAFDPEQARLFEEERIIAVTFDDKPIKAISKRNGH--RNQKGPPLHRAFSVFLFDTLGRLLLQKRAAAKITFPSTWTNTCCSHPLWTQAELGDDVQPNDPVLGCKRAAIRKLEQELGIPSSSLAPSDFTYMNRIHYISDSNPEWGEHEIDYIFLVRKDVELNPNLNEVSETRYVDPRELRGMIRRAEINRGVSREYLLAEEAAAGTQRVGGRGEGKVGEKRTEEEEVGPVQFTPWCRAIMEKWLFVWWSDVGEDAKALEKHRDVKRIFRI 349 T D EQ RL +E I+ V DDKP+ + SK+ H N K LHRAFSVFLF+T +LLLQKRA KITFP WTNTCCSHPL E GD ++ + V G K AA RKLE ELGIP+ + DF ++ RIHY++ S+ WGEHEIDYI ++KDV L+ NLNEVSETRYV +L+ M++ ++ TPW + I E +L+ WW+++G + K ++ +D++ I R+ Sbjct: 34 TGLDQEQIRLMDEVCIV-VGKDDKPVGSASKKTCHLMTNIKAGLLHRAFSVFLFNTNNQLLLQKRADGKITFPQMWTNTCCSHPLAIAGEYGDCIETS--VEGVKIAAQRKLEHELGIPNEDVPLEDFHFLTRIHYLAPSDVIWGEHEIDYILFIQKDVRLDINLNEVSETRYVTQEQLKEMLKDPMLSH------------------------------------------TPWFKLIYETFLYKWWNELGSNIKNIQVLKDLETIHRM 258
BLAST of NO09G01670 vs. NCBI_GenBank
Match: CBN79702.1 (isopentenyl-diphosphate delta-isomerase type 1 [Ectocarpus siliculosus]) HSP 1 Score: 205.3 bits (521), Expect = 3.100e-49 Identity = 108/266 (40.60%), Postives = 147/266 (55.26%), Query Frame = 0 Query: 94 ERIIAVTFDDKPIKAISKRNGHRNQKGPPLHRAFSVFLFDTLGRLLLQKRAAAKITFPSTWTNTCCSHPLWTQAELGDDV----------QPNDPVLGCKRAAIRKLEQELGIPSSSLAPSDFTYMNRIHYISDSNPEWGEHEIDYIFLVRKDVELNPNLNEVSETRYVDPRELRGMIRRAEINRGVSREYLLAEEAAAGTQRVGGRGEGKVGEKRTEEEEVGPVQFTPWCRAIMEKWLFVWWSDVGEDAKALEKHRDVKRIFRIG 350 E I V +D+P + SK H KG LHRAFSVFLFD GR+L+Q+RA +K TF WTNTCCSHPLW E+G D+ + + + G RAA+RKL QELGIP++ L DF+++ ++HYI++S WGEHEIDY++L++ DV+L PN NEVS+ ++D LR ++ RAE RGE V+FTPW I++K++F WW VG+ K V I R+G Sbjct: 4 EECILVDRNDRPTGSASKVETHLTSKGLLLHRAFSVFLFDKKGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDVEMGTDMTTPRGEKSASEGDAAIAGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVYLIQADVDLEPNPNEVSDAEFLDKDGLRSLLARAE------------------------RGE---------------VEFTPWSAYIIDKFVFGWWDHVGDKEKLASLRDSV--IHRVG 228
BLAST of NO09G01670 vs. NCBI_GenBank
Match: GAM37981.1 (hypothetical protein TCE0_033r08361 [Talaromyces cellulolyticus] >KUL82720.1 hypothetical protein ZTR_11109 [Talaromyces verruculosus] >PCG91303.1 Isopentenyl-diphosphate delta-isomerase, type 1 [Penicillium occitanis] >PCG96582.1 hypothetical protein PENOC_072190 [Penicillium occitanis]) HSP 1 Score: 200.7 bits (509), Expect = 7.700e-48 Identity = 111/268 (41.42%), Postives = 148/268 (55.22%), Query Frame = 0 Query: 83 FDPEQARLFEEERIIAVTFDDKPIKAISKRNGH--RNQKGPPLHRAFSVFLFDTLGRLLLQKRAAAKITFPSTWTNTCCSHPLWTQAELGDDVQPNDPVLGCKRAAIRKLEQELGIPSSSLAPSDFTYMNRIHYISDSNPEWGEHEIDYIFLVRKDVELNPNLNEVSETRYVDPRELRGMIRRAEINRGVSREYLLAEEAAAGTQRVGGRGEGKVGEKRTEEEEVGPVQFTPWCRAIMEKWLFVWWSDVGEDAKALEKHRDVKRIFRI 349 +D EQ RL EE I+ + +DDKPI + SK+ H N LHRAFSVFLFD+ RLLLQ+RAA KITFP WTNTCCSHPL E G ++ + + G KRAA+RKL+QELGI + + F ++ RIHY++ S+ +WGEHE+DYI ++ DV+ PN NEV +T+YV P EL+ M E+ +FTPW + I + LF WWS G +A +K+ K I R+ Sbjct: 50 YDEEQVRLMEEVCIV-LDYDDKPIGSASKKTCHLMTNINRGLLHRAFSVFLFDSQNRLLLQQRAAEKITFPDLWTNTCCSHPLGIAGETGAEL--SAAIEGVKRAAVRKLDQELGIKADQVPIDKFKFLTRIHYLAPSDGKWGEHEMDYILFIQADVDFVPNPNEVQDTKYVTPEELKSMFANPEL------------------------------------------KFTPWFKLICDTMLFEWWSHFG--TEAFDKYLFEKEIRRM 270
BLAST of NO09G01670 vs. NCBI_GenBank
Match: OQO28222.1 (Isopentenyl-diphosphate Delta-isomerase [Rachicladosporium sp. CCFEE 5018]) HSP 1 Score: 199.5 bits (506), Expect = 1.700e-47 Identity = 106/267 (39.70%), Postives = 149/267 (55.81%), Query Frame = 0 Query: 81 TAFDPEQARLFEEERIIAVTFDDKPIKAISKRNGH--RNQKGPPLHRAFSVFLFDTLGRLLLQKRAAAKITFPSTWTNTCCSHPLWTQAELGDDVQPNDPVLGCKRAAIRKLEQELGIPSSSLAPSDFTYMNRIHYISDSNPEWGEHEIDYIFLVRKDVELNPNLNEVSETRYVDPRELRGMIRRAEINRGVSREYLLAEEAAAGTQRVGGRGEGKVGEKRTEEEEVGPVQFTPWCRAIMEKWLFVWWSDVGEDAKALEKHRDVKRI 346 + +D EQ RL +E ++ + DD PI + SK+ H N LHRAFSVFLF++ +LLLQ+RA+ KITFP WTNTCCSHPL T E G ++ ++ V G K AA+RKLEQELGIPS+ + +F ++ RIHY + S+ +WGEHEIDYI L++ DV++ N NEV TR+V P+EL+ M E G + FTPW + I + LF WW + + + R+++R+ Sbjct: 43 SGYDAEQIRLMDEVCVV-LDVDDNPIGSASKKTCHLMENINKGLLHRAFSVFLFNSDNKLLLQRRASEKITFPDLWTNTCCSHPLATPGETGAEL--SEAVAGVKTAAVRKLEQELGIPSAQVPVENFEFLTRIHYKATSDGKWGEHEIDYILLLKADVDVEENPNEVQATRWVSPQELKAMF------------------------------------------EEGKLAFTPWFKLICQSMLFEWWEHLDGGLEGYKGEREIRRM 264
BLAST of NO09G01670 vs. NCBI_GenBank
Match: XP_024699766.1 (isopentenyl pyrophosphate,dimethylallyl pyrophosphate isomerase [Aspergillus steynii IBT 23096] >PLB44464.1 isopentenyl pyrophosphate,dimethylallyl pyrophosphate isomerase [Aspergillus steynii IBT 23096]) HSP 1 Score: 197.2 bits (500), Expect = 8.500e-47 Identity = 118/268 (44.03%), Postives = 145/268 (54.10%), Query Frame = 0 Query: 83 FDPEQARLFEEERIIAVTFDDKPIKAISKRNGH--RNQKGPPLHRAFSVFLFDTLGRLLLQKRAAAKITFPSTWTNTCCSHPLWTQAELGDDVQPNDPVLGCKRAAIRKLEQELGIPSSSLAPSDFTYMNRIHYISDSNPEWGEHEIDYIFLVRKDVELNPNLNEVSETRYVDPRELRGMIRRAEINRGVSREYLLAEEAAAGTQRVGGRGEGKVGEKRTEEEEVGPVQFTPWCRAIMEKWLFVWWSDVGEDAKALEKHRDVKRIFRI 349 +D EQ RL EE I+ + DDKPI + SK+ H N LHRAFSVFLFD+ RLLLQ+RA+ KITFP WTNTCCSHPL E G Q + VLG KRAA RKLEQELGI + F Y RIHY + S+ +WGEHEIDYI ++ DV+LN N NEV +TRYV EL+ M E+ G ++FTPW + I LF WWS +G AL+K++ I R+ Sbjct: 52 YDEEQVRLMEEVCIV-LDDDDKPIGSASKKTCHLMTNIDKGLLHRAFSVFLFDSKNRLLLQQRASEKITFPDMWTNTCCSHPLGVPGETG--AQLDAAVLGVKRAAQRKLEQELGIKPEQVPLDKFEYFTRIHYKAPSDGKWGEHEIDYILFIQADVDLNENPNEVRDTRYVSADELKVMF-----------------------------------------EQPG-LKFTPWFKLICNSMLFEWWSHLG--TAALDKYKGETEIRRM 272
BLAST of NO09G01670 vs. NCBI_GenBank
Match: XP_018296941.1 (isopentenyl-diphosphate delta-isomerase [Phycomyces blakesleeanus NRRL 1555(-)] >OAD78901.1 isopentenyl-diphosphate delta-isomerase [Phycomyces blakesleeanus NRRL 1555(-)]) HSP 1 Score: 196.8 bits (499), Expect = 1.100e-46 Identity = 116/269 (43.12%), Postives = 145/269 (53.90%), Query Frame = 0 Query: 83 FDPEQARLFEEERIIAVTFDDKPIKAISKRNGH--RNQKGPPLHRAFSVFLFDTLGRLLLQKRAAAKITFPSTWTNTCCSHPLWTQAELGDDVQPNDPVLGCKRAAIRKLEQELGIPSSSLAPSDFTYMNRIHYISDSNPEWGEHEIDYIFLVRKDVELNPNLNEVSETRYVDPRELRGMIRRAEINRGVSREYLLAEEAAAGTQRVGGRGEGKVGEKRTEEEEVGPVQFTPWCRAIMEKWLFVWWSDVGEDAKALEKHRDVKRIFRIG 350 +D EQARL EE II + DDKPI A SK+ H N LHRAFSVFLFD+ RLLLQ+RA+ KITFP WTNTCCSHPL T +EL + Q LG + AA RKL+ ELGIP+ + F Y+ RIHY++ S+ WGEHEIDYIF V+ DV + P+ NE+ + +YV P ELR M A+ N V TPW + I +LF WW + +E +D K I R+G Sbjct: 8 YDEEQARLMEEMCII-IDKDDKPIGADSKKTCHLMDNINNGLLHRAFSVFLFDSQNRLLLQQRASEKITFPDMWTNTCCSHPLNTPSELVEKDQ-----LGARTAAQRKLDHELGIPAHQVPLDSFKYLTRIHYLAPSDGLWGEHEIDYIFFVKADVTVKPSPNEIRDIKYVTPDELRAMF--ADPN----------------------------------------VPMTPWFKLICNTFLFDWWKKI----DTIETEKDTKTIHRLG 224
BLAST of NO09G01670 vs. NCBI_GenBank
Match: XP_005718187.1 (unnamed protein product [Chondrus crispus] >CDF38302.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 195.7 bits (496), Expect = 2.500e-46 Identity = 99/187 (52.94%), Postives = 131/187 (70.05%), Query Frame = 0 Query: 84 DPEQARLFEEERIIAVTFDDKPIKAISKRNGHRNQKGPPLHRAFSVFLFDTLGRLLLQKRAAAKITFPSTWTNTCCSHPLWTQAELGDDVQPNDPVLGCKRAAIRKLEQELGIPSSSLAPSDFTYMNRIHYISDS-NPEWGEHEIDYIFLVRKDVELNPNLNEVSETRYVDPRELRGMIRRAEINRG 270 D QA+L EE II V+ D I +SK++ H PLHRAFS+FLFD+ GR+LLQ+RAA K+TFPS WTNT CSHPL AELG++ +D V+G KRAAIRKL ELG+ SL +D T+M R+HY +++ + WGEHE+DY+F+ ++DVEL P NEVS+ RYVD +EL+ + AE + G Sbjct: 26 DETQAQLMSEE-IILVSPADAVIGKMSKKDSHLVSNNLPLHRAFSLFLFDSAGRMLLQRRAAEKVTFPSYWTNTVCSHPLHNAAELGEE-DGDDSVVGAKRAAIRKLGHELGVKEGSLGIADLTFMTRVHYRAENGDGVWGEHEVDYVFVAQRDVELRPEPNEVSDVRYVDQKELKELFAEAEKSEG 210
BLAST of NO09G01670 vs. NCBI_GenBank
Match: XP_019027108.1 (isopentenyl-diphosphate delta-isomerase [Saitoella complicata NRRL Y-17804] >GAO49340.1 hypothetical protein G7K_3491-t1 [Saitoella complicata NRRL Y-17804] >ODQ55995.1 isopentenyl-diphosphate delta-isomerase [Saitoella complicata NRRL Y-17804]) HSP 1 Score: 195.3 bits (495), Expect = 3.200e-46 Identity = 112/267 (41.95%), Postives = 146/267 (54.68%), Query Frame = 0 Query: 83 FDPEQARLFEEERIIAVTFDDKPIKAISKRNGH--RNQKGPPLHRAFSVFLFDTLGRLLLQKRAAAKITFPSTWTNTCCSHPLWTQAELGDDVQPNDPVLGCKRAAIRKLEQELGIPSSSLAPSDFTYMNRIHYISDSNPEWGEHEIDYIFLVRKDVELNPNLNEVSETRYVDPRELRGMIRRAEINRGVSREYLLAEEAAAGTQRVGGRGEGKVGEKRTEEEEVGPVQFTPWCRAIMEKWLFVWWSDVGE--DAKALEKHRDVKRI 346 +DPEQ +L EE I+ + +DKP+ + SK+ H N LHRAFSVFLFD RLLLQ+RA KITFP WTNTCCSHPL +E G D+ VLG KRAAIRKL+QELGIP+S + FTY+ RIHY++ S+ WGEHEIDYI +R V N NE+ + +YV E++ M V EGK FTPW + I E +LF WW ++ E D A++ ++ ++ Sbjct: 17 YDPEQVKLMEEVCIV-IDENDKPLGSASKKTCHLMENINNNLLHRAFSVFLFDEENRLLLQQRADEKITFPGMWTNTCCSHPLSIPSETGSDLP--SAVLGVKRAAIRKLDQELGIPASQVPIDKFTYLTRIHYVAPSDGLWGEHEIDYILFIRVPVTHAANPNEIKDVKYVSREEMQSMF-------------------------VDPAYEGK---------------FTPWFKLICETFLFKWWKELEEKDDLAAVKDEENIHKL 240 The following BLAST results are available for this feature:
BLAST of NO09G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01670 ID=NO09G01670|Name=NO09G01670|organism=Nannochloropsis oceanica|type=gene|length=1062bpback to top protein sequence of NO09G01670.1 >NO09G01670.1-protein ID=NO09G01670.1-protein|Name=NO09G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=354bpback to top Synonyms
Publications
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