NO09G01450, NO09G01450 (gene) Nannochloropsis oceanica

Overview
NameNO09G01450
Unique NameNO09G01450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4124
Alignment locationchr9:466304..470427 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:466304..470427 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO09G01450 vs. NCBI_GenBank
Match: EWM27630.1 (hypothetical protein Naga_100059g19 [Nannochloropsis gaditana])

HSP 1 Score: 230.7 bits (587), Expect = 9.100e-57
Identity = 183/455 (40.22%), Postives = 231/455 (50.77%), Query Frame = 0
Query:    1 MAASGSLRMALGHRAMAKKCNDTHVSIVQPEPVSPEATRAKEGTGPGGHPLPTHHSRRSSLTAESGSQMAEGTGILEDGLAEQHEMYGAARAVH-SDMTGGGWSTVFASASTXXXXXXXXXXXXXXXXXXXXXXVFCSSSAYSSRTH--------SSNSHCCDDTSRGSPALPEMPLFLDEKERQ---YGELGRGEGGQEELELEEERRRFQTNFSGGGMREIDVVGASESPSPSQRAALSALYGSHVGAMTVAEEK--EEEGKEGETEDNHLKETREEGE----ISEKVKRMLANHYLSDRPELKRYDSADAALRKARGGREGDTKGKKGGKHSQCEFSTSSSLSSHLKSELELGSSEATVVPTVLQVPPRMHSRRRSSEGFVEIQ--GLEDDFP--DSREYPQRFQQQHFHTGSNIXXXXXXXXXXXXXXXMPQLSRFDSGDYFMQKDTRTRA 434
            MA+SGSLRMALGHR +AKK N  +++    +PVSPEA R +EGTGPGGHPLP H  RRS+LT E+ S + E  G LE          GAA A+   D +    ST    A+                           S +  +  H        +S S    +  R SP+L EMP F D+ E+       + RG  G+E                          G SESPSPSQRAALS+LYG      T+AEEK  E+EG+  +  + H+ E R+  E    +S  V++ LA HY+SDRPELKRYDSADAAL  ARGG     KG + G  S    S++ ++SSHLKSEL    +     P+VLQ PPR+H RRRSSEGF+EIQ        P     E P+ ++  H   G +                +PQ SRFDSGDYFMQKD R RA
Sbjct:    1 MASSGSLRMALGHRVVAKKYNH-NIATAAEDPVSPEAMRVREGTGPGGHPLPRHQRRRSNLTDEASSALDEEEGTLE----------GAAAALEMEDESSRKVSTPSGMATRELGDGHPKTPSGPLSFTCCPNATSSPSCSSFAPEHPRRGPGPANSRSTVQPEDFRVSPSLLEMPTFPDDTEKSSILEQHVTRGTLGEEG------------------------AGTSESPSPSQRAALSSLYGLQAATSTLAEEKGEEDEGQLVQGREAHVGEVRQADEGAEGVSAFVEQFLARHYISDRPELKRYDSADAALAVARGGE----KGARSGAGSHSRQSSALTISSHLKSELPFEDAVPPPAPSVLQAPPRLHGRRRSSEGFIEIQVANAPSSGPACSQEEAPEGWETGH-SQGLSTGAIEEEEEEKRPRQALPQFSRFDSGDYFMQKDARARA 415          
The following BLAST results are available for this feature:
BLAST of NO09G01450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27630.19.100e-5740.22hypothetical protein Naga_100059g19 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01450.1NO09G01450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100059g19gene2918Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01450.1NO09G01450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01450 ID=NO09G01450|Name=NO09G01450|organism=Nannochloropsis oceanica|type=gene|length=4124bp
ACAGATTCGCAAGCAAAGACACGCCACACTACCAAGCAAAGTTTCCACGT
CACATGGCCGCTTCTGGAAGCTTGCGCATGGCCTTAGGCCACCGCGCAAT
GGCCAAGAAATGCAACGATACCCACGTTTCCATTGTCCAGCCGGAGCCTG
TCAGCCCCGAGgtaaatatcaccagttggaagggaaggggggggggggga
agggcaacgcaaggggcatggcaagtcttcatgttcggtacgtcggcaac
cgtctcaatgttctcgaaagcatgagaatgttcacgtggtgatggactcg
tccatccactttctaaatactttgttttgcatgtagaacagaatcgtcag
agtgtatttatgagcccactcgaccccgtctttaaggtcccgtcgtccag
cctttgaacgggcgattctcgagattcccttgtgcctcggtccatgtgga
cgacattcatcctgtatcagagaaaagagtctctaattctcatcagccac
acttactcacactacctctcttcctctccccgttgctcaaccaaatctca
acagGCCACCCGCGCCAAGGAAGGCACCGGCCCTGGGGGCCACCCCCTCC
CCACGCATCACTCACGTCGCTCCAGCCTAACCGCCGAATCTGGCTCGCAA
ATGGCTGAAGGGACGGGCATCTTGGAAGATGGTCTCGCCGAGCAACACGA
AATGTACGGGGCTGCCCGAGCAGTCCACAGCGACATGACTGGCGGTGGTT
GGAGTACCGTTTTTGCTAGTGCGAGCACTAGTGTGGCCTCCTCTATTTCC
CCCACGACGGCCTCCTCGTCCTCCCCTGACTTTTCGCCGTCTTCTGTCTT
CTGCTCTTCCTCCGCTTATAGCAGCCGCACACACAGCAGCAACAGTCACT
GCTGTGATGACACGTCACGGGGCTCTCCGGCTCTACCGGAGATGCCACTG
TTTTTGGACGAGAAGGAGCGGCAATATGGAGAGCTAGGAAGAGGGGAGGG
AGGACAGGAGGAGTTGGAACTGGAGGAAGAGCGGCGGCGGTTCCAGACGA
ACTTCTCGGGGGGAGGGATGCGTGAGATTGATGTGGTTGGTGCATCTGAG
AGCCCGAGCCCTTCGCAGCGGGCAGCGCTTTCGGCCCTGTATGGCTCTCA
TGTCGGGGCTATGACGGTGGCAGAGGAGAAGGAGGAAGAGGGGAAGGAGG
GTGAGACAGAAGACAACCACCTAAAGGAAACCAGGGAGGAGGGGGAAATT
AGCGAGAAGGTGAAGCGGATGTTGGCGAACCACTACCTGTCTGACAGACC
AGAACTAAAGAGGTATGACTCTGCCGATGCCGCCTTAAGGAAGGCCCGTG
GCGGGAGAGAGGGAGATACAAAAGGAAAGAAGGGAGGGAAGCACAGCCAG
TGCGAGTTTTCCACTTCCTCTTCGTTGTCTAGTCATTTAAAGAGTGAGCT
GGAGTTGGGGTCTTCGGAGGCTACAGTGGTACCGACGGTTTTGCAGGTTC
CACCCCGTATGCACAGCCGGCGCCGTTCTAGTGAGGGGTTTGTGGAGATC
CAGGGGTTAGAAGATGATTTTCCTGATTCTCGCGAGTACCCCCAGCGTTT
CCAGCAGCAGCATTTTCACACGGGCAGCAATATAATCAGGGAAGAGGAGG
AGGAGAAGGGAGGGCCACAGCAGCTCATGATGCCGCAGTTGTCAAGATTT
GATTCGGGGGATTACTTCATGCAGAAAGATACAAGAACTCGAGCAGCTGC
TGGGAATGCGGCTGTGATCGAGAGGCCTAGGGCGATTCAGGCTCAAGGAG
AAAAGGGAGAAAAGGAGACGGGGCATGGCGCCGTGAGGTGAGAGAATAAT
GGGTCTTCATGCAATACAGGAGATAAAGCTTTGGTTTTAAGATAGAACGA
GATGGTGGACTAGATGGAAGGGAGAGAGATCTACGCGCATACAAATGCTG
CAGCAGGAGGATGAGGAGGTGGAGGAAAATGAAACCATTAAATTATTATG
TTTGTTACACTGTCTTTTGATGTATATATTCTTTCAAAAATGGGTTTGGT
GTTTATCCATATTTGTGCGTGTACGTGTGAATGTGCACATTTGTGTTATA
CTCATTTCTCTTCTTGTCACTCCAGACTCGCAGTTGCAGGGGCCCGAAAA
AAGTAGGGAGGTGGGGAAGAGGCAAACCAAGAGATACAGATAGATCGCGA
GATATTGTTTGTAATGATAATGGTATAATAACGAATAACAGCAAGAACGA
CAAGAGCGACAACAACGACAACAACAATGACTACTACTTATATTACTATC
ACTACTACTACCACCAAAAGCAGAAAAAGGAGATTTTAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGTAAAAAGAGAAAGAAAGAAAGGAGGCGAGAG
GAACAATGTGTACCTTTATATACTGAATTGATAGGGGTCGAGATGACTTT
TCCAAGAGAGAACAAGTAGAAAAATAAGAAGAAGAGCAGCAGTAGCAACA
CGCAAGAAGCTGAACTCGAAAACAGAGTAGAACGAACACCATTTAGGGTG
TAATCTTTCTTGAAATTTCTTACTTCCTTTGGACGGAAACACAGGAAATG
TGCCAACATAGAAAAGGAGGAATATGAATTTTGCGGGTACTTTCTACTCC
AATGAAGAAGAAAAAAATCACATGTACATTACTTATTTTCTTTTTCCGTT
CAACTGTCATGCTGATTCTTCTCCCGGTATATACTTCCGTCGGTAACACA
AATCGTAAATCTTATGCTCTAATTCGTGAATTCCTCGACTTTCATACCTC
GTCAAAGGCCGCCACCGTGGGCGTGCCTCAAGCAACCCGTATATCGCCTC
CACCTCCTCCAATCCGTGATGATAATGCGGCCCGTCCTCCACCCCATCCT
GGGACGGACTTCGGTACAAAACACTCTCCTTCGGGACAGCACATGCCTCC
CAATTGCCCCCATCTCCTTCCATCACCTTCCCAACCCACGCTGCGTAATC
CCGCACGTCGGTTGCGACATGTAGAAACCCTCCAGGCTTCACACACCCCG
CCAAATGTCCCACCGACACAGCATTTATGACCCGCCGCTCGTGATCTTCA
GGCCTTGGCCACGGGTCCGGGAAAAAGATGCAAACCTCGTCTAAAGCCCC
GGGTGCGAACCAACCAGCCCGTAAGTGGTGCAGGAAATCACCACGCAACA
TTCGCACATTTTCCACCGCCGTTTCATTCATCCTCGTCAAGGCTCCCCCA
ACACTGGCAGAATGCCACTCACAGCCCATGAATCCCACTTCGGGCGCTAA
TTCTTGTAGCTCCAAGGCCTTGGTCACAAGGGTTGCCCCGTCTCCAAACC
CCACATCTACCACCACCGTTCGCACCTCGCGGTCCGGCGCAAAGAGGGCC
GGAATGTCCATCTTAACTTGCCAGCCCGGAGGCTCTATCCCGTACCGTGG
CCAAAGCTCTCGGATGCGCTTTTTCGTGCCCTTACCCACCCACCGCGAGA
CACGGCGGTACCACCCAGGCCTCTTTTGTAAGTTGCGCAGCCGCTTTCGT
TCCGCCGGGGAACGTCTGGGGTTGACGTCTTCCTCCTCCAAATCTAGTCC
CTCCATCATCGCGATCGTTGTTGCTTTCCAGTCATCTCCCTGCTCCTGGT
TCGATGATGTACACATAAGGGCTGCGCTATCCTCCTGTGGGGACGGTGGT
TCACGCATGCACACGGCTTGCGTCTTGCGTGCGCGCCGGGAGGCAAAATG
GAGAGGGGGCTTACTGCTGCCAACAAAAAACGCAGGCACCCGGGCAGCGG
CAAAGAGTTGAAGAAAAAGATGGAGGAAGAGGAAGCACACACACCGGCGA
TCAAAGCATCGGCGGTCAAAGCGGCGGGTGGCCAGTTTGTCGTGGTCGAT
TGTGTGAAGGGTGGGCGGTCACGAGAGGGCTGTGCTGTGTGGGGCTGGGG
AGGTTAGCGGAGACTCCTAAAAATATTAAAATCAGAATGAATGCGGGGAC
AGCAGCCGCTGCAAGAGATAGCCAGGGGCTTTGTTTACGTGCGACTGAAG
CTGCGTATGTGCGTGATGTTCAAATGCAGTGGATAGAGCAAGGACCCTAG
AAAACTGGCTATCCGGGTAGCTTC
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protein sequence of NO09G01450.1

>NO09G01450.1-protein ID=NO09G01450.1-protein|Name=NO09G01450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MAASGSLRMALGHRAMAKKCNDTHVSIVQPEPVSPEATRAKEGTGPGGHP
LPTHHSRRSSLTAESGSQMAEGTGILEDGLAEQHEMYGAARAVHSDMTGG
GWSTVFASASTSVASSISPTTASSSSPDFSPSSVFCSSSAYSSRTHSSNS
HCCDDTSRGSPALPEMPLFLDEKERQYGELGRGEGGQEELELEEERRRFQ
TNFSGGGMREIDVVGASESPSPSQRAALSALYGSHVGAMTVAEEKEEEGK
EGETEDNHLKETREEGEISEKVKRMLANHYLSDRPELKRYDSADAALRKA
RGGREGDTKGKKGGKHSQCEFSTSSSLSSHLKSELELGSSEATVVPTVLQ
VPPRMHSRRRSSEGFVEIQGLEDDFPDSREYPQRFQQQHFHTGSNIIREE
EEEKGGPQQLMMPQLSRFDSGDYFMQKDTRTRAAAGNAAVIERPRAIQAQ
GEKGEKETGHGAVR*
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Synonyms
Publications